View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6063_low_61 (Length: 249)
Name: NF6063_low_61
Description: NF6063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6063_low_61 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 53678118 - 53678348
Alignment:
| Q |
1 |
catccatatgagcagtattgaagggacacttcaatatttgcaacgaagttgttattaattttattgatttgacaaaactttatgaagtttaagctataac |
100 |
Q |
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| T |
53678118 |
catccatatgagcagtattgaagggacacttcaatatttgcaacgaagttgttattaattttattgatttgacaaaactttatgaagtttaagctataac |
53678217 |
T |
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| Q |
101 |
gacattagtttcataattcatcaactagcttccaaacatgtctacacaagacatgacaacgtaaagccacacctaatgaatggtggagttgagagagcaa |
200 |
Q |
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| T |
53678218 |
gacataagtttcataattcatcaactagcttccaaacatgtctacacaagacatgacaacgtaaagccacacctaatgaatggtggagttgagagagcaa |
53678317 |
T |
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| Q |
201 |
gggatttcgattagggaactgccaagacatg |
231 |
Q |
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||||||| ||||||||||||||||||||||| |
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| T |
53678318 |
gggatttggattagggaactgccaagacatg |
53678348 |
T |
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