View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6065_low_12 (Length: 261)
Name: NF6065_low_12
Description: NF6065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6065_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 4 - 252
Target Start/End: Complemental strand, 43424675 - 43424427
Alignment:
| Q |
4 |
gagaccaagtagaatttggtgttccatgaaattcttcatttccatagacatagttgttcactgaactttcttgtttaacatgatcaacaagagaagcatt |
103 |
Q |
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| T |
43424675 |
gagaccaagtagaatttggtgttccatgaaattcttcatttccatagacatagttgttcactgaactttcttgtttaacatgatcaacaagagaagcatt |
43424576 |
T |
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| Q |
104 |
tgaaggaggctgacttagcatactagccttcccttcttcatacaccacaccattcctatattttccaaaatcatcaaaaattaacacaaaaatcaattat |
203 |
Q |
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| T |
43424575 |
tgaaggaggctgacttagcatactagccttctcttcttcatacaccacaccattcctatattttccaaaatcatcaaaaattaacacaaaaatcaattat |
43424476 |
T |
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| Q |
204 |
atatctatatagattagttgatccttcaaaataatcaaatcatattctt |
252 |
Q |
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| T |
43424475 |
atatctatatagattagttgatccttcaaaataatcaaatcattttctt |
43424427 |
T |
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