View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6069_high_3 (Length: 256)
Name: NF6069_high_3
Description: NF6069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6069_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 49164363 - 49164603
Alignment:
| Q |
1 |
caaatattccttgcatatttaattaagacaatataccttaatcaatttaagcctcatatgggtcggttaagaaatgttttcttttacactatacatacat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
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| T |
49164363 |
caaatattccttgcatatttaattaagacaatataccttaatcaatttaagcctcatatgggtcggttaagaaatattttcttttacactatacattcat |
49164462 |
T |
|
| Q |
101 |
agatattttttatttgcttagcactaatnnnnnnnctggaccaccatgtgtgggagggttgaatattttgctattaacctagctcgggtttgtgaattag |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49164463 |
agatattttttatttgcttagcactaataaaaaaactggaccaccatgtgtgggagggttgaatattttgctattaacctagctcgggtttgtgaattag |
49164562 |
T |
|
| Q |
201 |
atcagctgtatgctattttctctacatactagttttgctat |
241 |
Q |
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|| |||||||||||||||||||||||||||||||||||||| |
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| T |
49164563 |
ataagctgtatgctattttctctacatactagttttgctat |
49164603 |
T |
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