View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6069_low_1 (Length: 477)
Name: NF6069_low_1
Description: NF6069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6069_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 16 - 468
Target Start/End: Original strand, 30151085 - 30151537
Alignment:
| Q |
16 |
attaagtaggccaaccagtgttgtgccttcgttgataacttaagaggctttcatctattcgttttcttatgtcttttgatatattgttttgtgcttttat |
115 |
Q |
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| T |
30151085 |
attaagtaggccaaccagtgttgtgccttcgttgataacttaagaggctttcatctattcgttttcttatgtcttttgatatattgttttgtgcttttat |
30151184 |
T |
|
| Q |
116 |
gcaggtgaaaaagcgtgctgttgaacttgctaacgccatgaaaaatgaagatggggtagcaggagcagttaacgccttctataaacattatccgcgcaaa |
215 |
Q |
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| T |
30151185 |
gcaggtgaaaaagcgtgctgttgaacttgctaacgccatgaaaaatgaagatggggtagcaggagcagttaacgccttctataaacattatccgcgcgaa |
30151284 |
T |
|
| Q |
216 |
aaacctgatactgaggctgagcccaggccagtaccctcagtacataaacatttatctatacgaggatgctttggctgctaccattcttctgcataatggt |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151285 |
aaacctgatactgaggctgagcccaggccagtaccctcagtacataaacatttatctatacgaggatgctttggctgctaccattcttctgcataatggc |
30151384 |
T |
|
| Q |
316 |
ttcttgtccatacaacacattcctctatgtaatcatgttaattcttctttagtctagttctgctatatcagatattgtgactgaaatgtaaattgtcgtg |
415 |
Q |
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|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151385 |
ttcttgtccatacaacacattcctgtatgcaatcatgttaattcttctttagtctagttctgctatatcagatattgtgactgaaatgtaaattgtcgtg |
30151484 |
T |
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| Q |
416 |
gtgattttgttgagcttctcaggaaatagttcagaatggtcataactgatgat |
468 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
30151485 |
gtgattttgttgagcttctccggaaatagttcagaatggtcataactgatgat |
30151537 |
T |
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