View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6071_low_7 (Length: 256)
Name: NF6071_low_7
Description: NF6071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6071_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 42934766 - 42934552
Alignment:
| Q |
23 |
ctgcatattcagtagaatatcatatcagaaaatgttaaaattaatggtaaaaaatctatcttaggatatttgcatttttaattgaagggttggttaaatc |
122 |
Q |
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| T |
42934766 |
ctgcatattcagcagaatatcatatcagaaaatgttaaaattaatggtaaaaaatctatcttaggatatttgcatttttaattgaagggttggttaaatc |
42934667 |
T |
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| Q |
123 |
tgtgcttttgaggggatattagcagaggtacagaatcctaaaactagagttgtgattggttttatttgtggatatggacaattagagtaattatgttaga |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42934666 |
tgtgcttttgaggggatattagcagaggtacagaatcctaaaactagagttgtgattggttttatttgtggatatggacaattagagtaattatgttaga |
42934567 |
T |
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| Q |
223 |
ttcaattatttgcat |
237 |
Q |
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| T |
42934566 |
ttccattatttgcat |
42934552 |
T |
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