View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6071_low_9 (Length: 239)
Name: NF6071_low_9
Description: NF6071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6071_low_9 |
 | |
|
| [»] chr2 (6 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
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|
| [»] chr4 (7 HSPs) |
| |
|
| [»] chr1 (11 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr5 (5 HSPs) |
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| [»] chr6 (1 HSPs) |
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| [»] chr3 (6 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 40254339 - 40254451
Alignment:
| Q |
127 |
aacttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttt |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40254339 |
aacttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttt |
40254438 |
T |
|
| Q |
227 |
caaaatagttttt |
239 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
40254439 |
caaaatagctttt |
40254451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 31786698 - 31786806
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31786698 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
31786797 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
|||| |||| |
|
|
| T |
31786798 |
atagctttt |
31786806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 44282494 - 44282601
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44282494 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
44282593 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
44282594 |
tagctttt |
44282601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 14379660 - 14379767
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14379660 |
agcctccgtttggtttggcttttgcaaagtcagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
14379759 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
14379760 |
tagctttt |
14379767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 31686984 - 31686886
Alignment:
| Q |
141 |
ttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagttttt |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
31686984 |
ttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagctttt |
31686886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 2443868 - 2443775
Alignment:
| Q |
136 |
tctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatattt-aacatgtttggtttggcttttca |
228 |
Q |
| |
|
|||||||||||||||||||| | ||| ||| ||||||| | |||| ||||||||||||| ||| |||| || |||||||||||||||||||| |
|
|
| T |
2443868 |
tctgtttggtttggcttttgtacagctggaaacaattctacaacattccaaaagcaattctacaacatttcaatatgtttggtttggcttttca |
2443775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 25341652 - 25341543
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25341652 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
25341553 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
||||| |||| |
|
|
| T |
25341552 |
aatagctttt |
25341543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 31012609 - 31012501
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31012609 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
31012510 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
|||| |||| |
|
|
| T |
31012509 |
atagctttt |
31012501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 31431243 - 31431134
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31431243 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
31431144 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
||||| |||| |
|
|
| T |
31431143 |
aatagctttt |
31431134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 24038267 - 24038160
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24038267 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
24038168 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
24038167 |
tagctttt |
24038160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 39383163 - 39383056
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39383163 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
39383064 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
39383063 |
tagctttt |
39383056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 24246540 - 24246647
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24246540 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattatgcaatatttaacatgtttggtttggcttttcaaaa |
24246639 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
24246640 |
tagctttt |
24246647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 18140375 - 18140481
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18140375 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaat |
18140474 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
18140475 |
agctttt |
18140481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 49127588 - 49127694
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
49127588 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaat |
49127687 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
49127688 |
agctttt |
49127694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 4114301 - 4114213
Alignment:
| Q |
44 |
ttccaaattgccgatgcatatgacacgcagtgattggtgaatcaaatgcatgccaacaacactagagatctatttgaataaacaactta |
132 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
4114301 |
ttccaaattgccaaggcatatgacacgcagtgattggtgaatcaaatgcatgccaacaacactagagatctgtttggataaacaactta |
4114213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 27000474 - 27000365
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27000474 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatatttggtttggcttttcaa |
27000375 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
|||||||||| |
|
|
| T |
27000374 |
aatagttttt |
27000365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 15353227 - 15353335
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15353227 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
15353326 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
|||| |||| |
|
|
| T |
15353327 |
atagctttt |
15353335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 7593409 - 7593302
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7593409 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
7593310 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
7593309 |
tagctttt |
7593302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 26821382 - 26821489
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26821382 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
26821481 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
26821482 |
tagctttt |
26821489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 38627538 - 38627645
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38627538 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
38627637 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
38627638 |
tagctttt |
38627645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 38843151 - 38843258
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38843151 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
38843250 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
38843251 |
tagctttt |
38843258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 50979441 - 50979334
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50979441 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
50979342 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
50979341 |
tagctttt |
50979334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 5271708 - 5271602
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5271708 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
5271609 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
5271608 |
agctttt |
5271602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 36496256 - 36496150
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36496256 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
36496157 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
36496156 |
agctttt |
36496150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 51488702 - 51488594
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
51488702 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaaa |
51488603 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
|||| |||| |
|
|
| T |
51488602 |
atagctttt |
51488594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 27575898 - 27575991
Alignment:
| Q |
136 |
tctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatattt-aacatgtttggtttggcttttca |
228 |
Q |
| |
|
|||||||||||||||||||| | ||| |||| ||||||| | |||| ||||||||||||| ||| |||| || |||||||||||| ||||||| |
|
|
| T |
27575898 |
tctgtttggtttggcttttgtacagctagaagcaattctacaacattccaaaagcaattctacaacatttcaatatgtttggtttgacttttca |
27575991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 30984508 - 30984400
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30984508 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
30984409 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
|||| |||| |
|
|
| T |
30984408 |
atagctttt |
30984400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 30210394 - 30210501
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30210394 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
30210493 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
30210494 |
tagctttt |
30210501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 34774554 - 34774446
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
34774554 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattttggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaa |
34774455 |
T |
|
| Q |
231 |
atagttttt |
239 |
Q |
| |
|
||||||||| |
|
|
| T |
34774454 |
atagttttt |
34774446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 629586 - 629523
Alignment:
| Q |
176 |
gagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagttttt |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
629586 |
gagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagctttt |
629523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 308871 - 308915
Alignment:
| Q |
131 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctg |
175 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
308871 |
tagcctctgtttggtttggcttttgcaaagccagaatcaattctg |
308915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 3261049 - 3260937
Alignment:
| Q |
127 |
aacttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttt |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3261049 |
aacttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgactttt |
3260950 |
T |
|
| Q |
227 |
caaaatagttttt |
239 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
3260949 |
caaaatagctttt |
3260937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 33114956 - 33115063
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
33114956 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaa |
33115055 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
|||||||| |
|
|
| T |
33115056 |
tagttttt |
33115063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 29542646 - 29542540
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29542646 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
29542547 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
29542546 |
agctttt |
29542540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 42663356 - 42663463
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42663356 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaaaa |
42663455 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
42663456 |
tagctttt |
42663463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 14082814 - 14082920
Alignment:
| Q |
133 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
14082814 |
gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctacaatatttaacatgtttggtttgactttttaaaat |
14082913 |
T |
|
| Q |
233 |
agttttt |
239 |
Q |
| |
|
|| |||| |
|
|
| T |
14082914 |
agctttt |
14082920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 30018773 - 30018880
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30018773 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
30018872 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
30018873 |
tagctttt |
30018880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 51129220 - 51129113
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51129220 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
51129121 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
51129120 |
tagctttt |
51129113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 47141607 - 47141500
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47141607 |
agcctctgtttggtttggcatttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
47141508 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
||| |||| |
|
|
| T |
47141507 |
tagctttt |
47141500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 1527529 - 1527638
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1527529 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaa |
1527628 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
| ||| |||| |
|
|
| T |
1527629 |
actagctttt |
1527638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 47696997 - 47697106
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
47696997 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctgaagcatttcaaaagcaattctgcaatatttaacatgtttggtttgccttttcaa |
47697096 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
||||| |||| |
|
|
| T |
47697097 |
aatagctttt |
47697106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 52691925 - 52692034
Alignment:
| Q |
130 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
52691925 |
ttagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttaaa |
52692024 |
T |
|
| Q |
230 |
aatagttttt |
239 |
Q |
| |
|
||||| |||| |
|
|
| T |
52692025 |
aatagatttt |
52692034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 38469068 - 38469175
Alignment:
| Q |
132 |
agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
38469068 |
agcctctgtttggtttggcttttgcaaagccagaatcaattatggagcatttcaaaagcaattctgcaatatttaacatgtttggtttaccttttcaaaa |
38469167 |
T |
|
| Q |
232 |
tagttttt |
239 |
Q |
| |
|
|||||||| |
|
|
| T |
38469168 |
tagttttt |
38469175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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