View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6072_low_15 (Length: 202)
Name: NF6072_low_15
Description: NF6072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6072_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 14811124 - 14811293
Alignment:
| Q |
15 |
cacagagccaaaagcttaagggaagagaaaataaaaacaaaggatccaaacacatgaaaaaatgaacttaagatactttaaatgtaagcaagagatttta |
114 |
Q |
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| T |
14811124 |
cacagaaccaaaaccttaagggaagagaaaataaaaacaaaggatccaaacacatgaaaaaatgaacttaagatactttaaatgtaagcaagagatttta |
14811223 |
T |
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| Q |
115 |
acaatgtttgcaacagtgatcaagccatcaacatcattaagcacaatctcatagtgcagagcagtcaaga |
184 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
14811224 |
acaatgtttgcaacagtgatcaagccatcaacatcattaatcacaatctcatagtgcagagcagtcaaga |
14811293 |
T |
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