View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6074_high_31 (Length: 252)
Name: NF6074_high_31
Description: NF6074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6074_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8180203 - 8179966
Alignment:
| Q |
1 |
cttatagctaattaatacgtatagtataatgtagttaagattaactatgcaaactaacaaaatgggtttcagaagtacaattttggaagaatattagtat |
100 |
Q |
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| T |
8180203 |
cttatagctaattaatacgtatagtataatgtagttaaggttaactatgcaaactaacaaaatgggtttcagaagtacaattttggaagaatattagtat |
8180104 |
T |
|
| Q |
101 |
ggtagtaaattgttaatgcgtaagtattagtagaagtgattaattacgtttagttattaaaatccaacgaccactttgtgaactcatacttcaatcacct |
200 |
Q |
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| T |
8180103 |
ggtagtaaattgttaatgcgtaagtattagtagaagtgattaattacgtttagttattaaaatccaacgaccactttgtgaactcatacttcaatcacct |
8180004 |
T |
|
| Q |
201 |
tcataattcaacttgatttattgcacatagtgatataagt |
240 |
Q |
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|||||||||||||||||||||||||| |||||||||||| |
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| T |
8180003 |
tcataattcaacttgatttattgcac--agtgatataagt |
8179966 |
T |
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