View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6074_high_34 (Length: 241)
Name: NF6074_high_34
Description: NF6074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6074_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3645281 - 3645060
Alignment:
| Q |
1 |
ttgtccatatctcactatttatattgtaaatgacaagaatctaagcatatgtgatgattaacataacaattgtcttatttgaacatcagaacactgacgc |
100 |
Q |
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| T |
3645281 |
ttgtccatatctcactatttatattgtaaacgacaagaatctaagcatatgtgatgattaacataacaattgtgttatttgaacatcagatcactgacgc |
3645182 |
T |
|
| Q |
101 |
tgtatgtgacactatatatgtttatttctctgtttacttttttatcttctacggttacaccaaaaacagacataaaacccaaattatacagtacatgaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3645181 |
tgtatgtgacactatatatgtttatttctctgtttacttttttatcttctacggttacaccaaaaacagacataaaacccaaattatacagtacatgaca |
3645082 |
T |
|
| Q |
201 |
tcaaaattttggatgtctgtat |
222 |
Q |
| |
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|||||| ||||||||||||||| |
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| T |
3645081 |
tcaaaactttggatgtctgtat |
3645060 |
T |
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