View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6074_high_39 (Length: 238)
Name: NF6074_high_39
Description: NF6074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6074_high_39 |
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Alignment Details
Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 32339401 - 32339596
Alignment:
| Q |
1 |
catattaatatttttcaaccattggtcttcaatgaattcaacattacaaacttatgataattttcttcataataggatcataaaacttataccaaactta |
100 |
Q |
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| T |
32339401 |
catattaatatttttcaaccattggtcttcaatgaattcaacattacaa-cttatgataattttcttcataataggatcataaaacttataccaaactta |
32339499 |
T |
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| Q |
101 |
tgataatc----aacaagcatggtttcctttttatatccacaattgtaatcttatctttaggcatcacattgtatgtgcgcaaacgatttacatatg |
193 |
Q |
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| T |
32339500 |
tgataatcgatcaacaaccatggtttcctttttacatccacaatagtaatcttatctttaggcatcacattgtatgtgcgcaaacgatttacatatg |
32339596 |
T |
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