View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6074_low_37 (Length: 240)

Name: NF6074_low_37
Description: NF6074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6074_low_37
NF6074_low_37
[»] chr5 (46 HSPs)
chr5 (45-240)||(27079002-27079197)
chr5 (53-240)||(34756289-34756475)
chr5 (45-240)||(15480006-15480198)
chr5 (45-240)||(16591990-16592183)
chr5 (44-240)||(36187794-36187988)
chr5 (49-240)||(19523190-19523380)
chr5 (45-240)||(38869279-38869472)
chr5 (50-240)||(2274881-2275070)
chr5 (44-240)||(9364282-9364477)
chr5 (45-226)||(31194528-31194706)
chr5 (45-240)||(16198709-16198903)
chr5 (48-240)||(30854320-30854511)
chr5 (46-240)||(28822253-28822451)
chr5 (45-231)||(22986473-22986658)
chr5 (44-234)||(16799239-16799430)
chr5 (45-229)||(27924084-27924267)
chr5 (45-240)||(7670915-7671118)
chr5 (127-233)||(23284058-23284164)
chr5 (132-240)||(40389537-40389645)
chr5 (128-209)||(7338021-7338102)
chr5 (45-226)||(31881348-31881528)
chr5 (127-228)||(36868872-36868973)
chr5 (127-230)||(34425904-34426007)
chr5 (127-230)||(1366522-1366625)
chr5 (128-230)||(14318382-14318484)
chr5 (127-227)||(2024638-2024738)
chr5 (135-230)||(2530901-2530996)
chr5 (127-228)||(10407464-10407565)
chr5 (135-227)||(26718953-26719045)
chr5 (135-227)||(26988697-26988789)
chr5 (127-230)||(33037781-33037884)
chr5 (128-230)||(2412089-2412191)
chr5 (45-111)||(23283943-23284010)
chr5 (127-230)||(40794323-40794426)
chr5 (135-229)||(24395741-24395835)
chr5 (129-185)||(22648734-22648790)
chr5 (127-174)||(606211-606258)
chr5 (135-222)||(10543682-10543769)
chr5 (127-230)||(11242314-11242417)
chr5 (128-230)||(41911614-41911716)
chr5 (44-109)||(40389452-40389518)
chr5 (150-230)||(15639644-15639724)
chr5 (127-171)||(27530543-27530587)
chr5 (134-194)||(17344993-17345053)
chr5 (134-170)||(22875003-22875039)
chr5 (127-167)||(35080766-35080806)
[»] chr6 (22 HSPs)
chr6 (45-240)||(13727317-13727511)
chr6 (44-240)||(21479488-21479684)
chr6 (45-240)||(21280539-21280733)
chr6 (45-240)||(27788608-27788800)
chr6 (45-240)||(19737612-19737804)
chr6 (46-240)||(33774111-33774305)
chr6 (45-240)||(20711638-20711832)
chr6 (44-240)||(30832442-30832636)
chr6 (45-240)||(24710914-24711111)
chr6 (59-240)||(28075777-28075960)
chr6 (45-240)||(17353948-17354142)
chr6 (44-208)||(27314096-27314259)
chr6 (47-226)||(1155767-1155947)
chr6 (127-230)||(34397861-34397964)
chr6 (53-234)||(235151-235332)
chr6 (134-230)||(2477590-2477686)
chr6 (134-230)||(6159442-6159538)
chr6 (139-230)||(21183686-21183777)
chr6 (135-230)||(20611794-20611889)
chr6 (151-229)||(4036953-4037031)
chr6 (128-213)||(30121783-30121868)
chr6 (51-103)||(19987277-19987330)
[»] chr8 (36 HSPs)
chr8 (44-240)||(2952136-2952333)
chr8 (48-240)||(30883320-30883512)
chr8 (44-240)||(45475808-45476002)
chr8 (48-240)||(13534609-13534798)
chr8 (48-240)||(13624149-13624338)
chr8 (44-231)||(37430075-37430261)
chr8 (45-240)||(23606548-23606741)
chr8 (44-240)||(3048434-3048629)
chr8 (45-240)||(23798179-23798373)
chr8 (44-240)||(42600773-42600968)
chr8 (45-240)||(10917382-10917575)
chr8 (44-240)||(41879172-41879365)
chr8 (56-232)||(5860671-5860848)
chr8 (135-230)||(8102913-8103008)
chr8 (127-230)||(7944521-7944624)
chr8 (127-230)||(41677172-41677276)
chr8 (127-230)||(5973106-5973209)
chr8 (127-230)||(11290185-11290288)
chr8 (128-230)||(39332405-39332507)
chr8 (150-230)||(5942697-5942777)
chr8 (127-230)||(15167414-15167517)
chr8 (136-230)||(5721560-5721654)
chr8 (135-230)||(15078759-15078854)
chr8 (45-111)||(20003728-20003795)
chr8 (127-225)||(34789861-34789959)
chr8 (127-186)||(8646250-8646309)
chr8 (135-230)||(25561502-25561595)
chr8 (128-193)||(30674403-30674468)
chr8 (128-173)||(9108551-9108596)
chr8 (128-230)||(14509983-14510084)
chr8 (134-194)||(23941097-23941157)
chr8 (158-197)||(5757114-5757153)
chr8 (135-174)||(34868184-34868223)
chr8 (128-184)||(34048705-34048761)
chr8 (44-89)||(33963267-33963313)
chr8 (127-167)||(38009151-38009191)
[»] chr7 (37 HSPs)
chr7 (45-240)||(29077211-29077404)
chr7 (45-240)||(18776683-18776877)
chr7 (48-240)||(8171460-8171650)
chr7 (45-240)||(20091197-20091392)
chr7 (45-240)||(12596207-12596398)
chr7 (45-240)||(23550988-23551182)
chr7 (44-194)||(26254030-26254179)
chr7 (45-234)||(10329327-10329515)
chr7 (44-240)||(48983755-48983955)
chr7 (44-240)||(10955475-10955672)
chr7 (44-226)||(28749715-28749896)
chr7 (44-240)||(24525598-24525796)
chr7 (45-231)||(19692094-19692279)
chr7 (44-240)||(47984884-47985081)
chr7 (44-240)||(38414792-38414987)
chr7 (47-232)||(8239686-8239869)
chr7 (128-208)||(33162338-33162418)
chr7 (127-230)||(2611260-2611363)
chr7 (127-230)||(7398452-7398555)
chr7 (128-227)||(9021799-9021898)
chr7 (45-240)||(25010424-25010611)
chr7 (127-219)||(23744808-23744900)
chr7 (135-227)||(23859077-23859169)
chr7 (128-219)||(6765680-6765771)
chr7 (127-230)||(27237421-27237524)
chr7 (135-230)||(36891579-36891674)
chr7 (129-227)||(36902924-36903022)
chr7 (135-230)||(12981327-12981422)
chr7 (134-230)||(18201138-18201234)
chr7 (135-226)||(20153206-20153297)
chr7 (128-194)||(21763586-21763652)
chr7 (151-229)||(38971255-38971333)
chr7 (127-170)||(12419493-12419536)
chr7 (51-111)||(40357303-40357364)
chr7 (128-184)||(9014177-9014233)
chr7 (15-45)||(42765783-42765813)
chr7 (176-216)||(40357413-40357453)
[»] chr4 (56 HSPs)
chr4 (45-240)||(54780773-54780968)
chr4 (45-240)||(34768492-34768685)
chr4 (49-240)||(47128983-47129172)
chr4 (57-240)||(38209520-38209702)
chr4 (45-240)||(32915381-32915575)
chr4 (45-240)||(34027575-34027768)
chr4 (44-240)||(10978896-10979093)
chr4 (45-239)||(2790659-2790851)
chr4 (59-240)||(43455463-43455642)
chr4 (45-240)||(37777140-37777334)
chr4 (45-240)||(37514655-37514848)
chr4 (44-240)||(48209236-48209437)
chr4 (44-240)||(32128580-32128775)
chr4 (49-240)||(1105528-1105717)
chr4 (44-240)||(5128757-5128953)
chr4 (44-232)||(54083159-54083345)
chr4 (45-240)||(10428116-10428316)
chr4 (45-240)||(16845017-16845210)
chr4 (44-204)||(17679432-17679590)
chr4 (45-240)||(19498500-19498691)
chr4 (44-240)||(55255265-55255448)
chr4 (48-230)||(35779248-35779426)
chr4 (56-240)||(35465103-35465284)
chr4 (137-240)||(13460203-13460306)
chr4 (44-240)||(16882312-16882506)
chr4 (45-240)||(40089512-40089714)
chr4 (127-194)||(51691913-51691980)
chr4 (45-186)||(16922245-16922386)
chr4 (48-208)||(51964736-51964897)
chr4 (127-230)||(52468292-52468395)
chr4 (148-230)||(4167910-4167992)
chr4 (45-182)||(23508427-23508564)
chr4 (134-230)||(27112036-27112132)
chr4 (127-230)||(10041998-10042101)
chr4 (127-192)||(9578662-9578728)
chr4 (134-230)||(36118463-36118559)
chr4 (177-240)||(23509846-23509909)
chr4 (127-240)||(24969433-24969536)
chr4 (134-224)||(36178684-36178774)
chr4 (51-240)||(38352189-38352366)
chr4 (127-207)||(39655252-39655332)
chr4 (127-230)||(24396940-24397043)
chr4 (134-230)||(2135326-2135422)
chr4 (136-230)||(37744916-37745011)
chr4 (127-229)||(39329390-39329492)
chr4 (45-111)||(24969719-24969786)
chr4 (127-186)||(36362869-36362928)
chr4 (128-171)||(24614018-24614061)
chr4 (141-192)||(40217276-40217327)
chr4 (142-192)||(29425187-29425237)
chr4 (127-169)||(30507120-30507162)
chr4 (134-187)||(45656224-45656277)
chr4 (45-104)||(9578575-9578635)
chr4 (137-184)||(15735142-15735189)
chr4 (142-192)||(11906904-11906954)
chr4 (45-77)||(980363-980395)
[»] chr3 (37 HSPs)
chr3 (45-240)||(21582765-21582960)
chr3 (45-240)||(54619121-54619315)
chr3 (45-240)||(38681011-38681205)
chr3 (45-240)||(36715942-36716137)
chr3 (45-240)||(47467678-47467872)
chr3 (46-240)||(3953816-3954008)
chr3 (44-232)||(27078485-27078673)
chr3 (44-232)||(27084282-27084470)
chr3 (45-232)||(8073257-8073442)
chr3 (45-232)||(42098803-42098989)
chr3 (45-240)||(43207157-43207349)
chr3 (44-233)||(50939151-50939338)
chr3 (45-240)||(34290554-34290748)
chr3 (49-240)||(37168361-37168551)
chr3 (49-240)||(44708471-44708660)
chr3 (45-240)||(53506802-53506996)
chr3 (48-240)||(53149235-53149426)
chr3 (44-240)||(54407072-54407269)
chr3 (44-234)||(50258541-50258730)
chr3 (57-240)||(18372473-18372658)
chr3 (48-226)||(36605973-36606149)
chr3 (127-240)||(9878686-9878799)
chr3 (163-240)||(29620423-29620500)
chr3 (127-230)||(54574826-54574929)
chr3 (135-230)||(8420330-8420425)
chr3 (51-234)||(48157139-48157310)
chr3 (135-230)||(32319162-32319257)
chr3 (135-225)||(28689368-28689458)
chr3 (45-106)||(29620364-29620426)
chr3 (139-192)||(23641329-23641382)
chr3 (127-196)||(42453442-42453511)
chr3 (128-225)||(49393099-49393195)
chr3 (127-186)||(26279590-26279649)
chr3 (128-230)||(25855426-25855527)
chr3 (45-111)||(48720429-48720496)
chr3 (127-230)||(52374660-52374763)
chr3 (128-230)||(789940-790042)
[»] chr2 (35 HSPs)
chr2 (45-240)||(3155207-3155401)
chr2 (45-240)||(4505884-4506078)
chr2 (48-240)||(6964997-6965186)
chr2 (45-240)||(12337365-12337560)
chr2 (45-240)||(8906996-8907191)
chr2 (45-233)||(24410434-24410623)
chr2 (45-240)||(27506659-27506852)
chr2 (45-240)||(29939781-29939974)
chr2 (44-240)||(3952996-3953189)
chr2 (45-240)||(26716118-26716313)
chr2 (44-204)||(40636164-40636322)
chr2 (45-232)||(7162782-7162967)
chr2 (48-240)||(10762488-10762677)
chr2 (45-240)||(9046019-9046213)
chr2 (48-214)||(34693991-34694155)
chr2 (48-214)||(34716403-34716567)
chr2 (127-228)||(24035544-24035645)
chr2 (127-230)||(16097008-16097111)
chr2 (51-204)||(5952642-5952791)
chr2 (129-230)||(38400798-38400899)
chr2 (127-230)||(21665699-21665802)
chr2 (127-230)||(13800543-13800647)
chr2 (127-230)||(12134039-12134142)
chr2 (127-230)||(28425709-28425812)
chr2 (45-159)||(1396617-1396730)
chr2 (128-230)||(16227368-16227470)
chr2 (127-230)||(7742132-7742236)
chr2 (128-207)||(42029168-42029247)
chr2 (128-230)||(11912757-11912859)
chr2 (161-230)||(37182670-37182739)
chr2 (127-174)||(8327674-8327721)
chr2 (127-168)||(22727456-22727497)
chr2 (128-184)||(11952588-11952643)
chr2 (156-224)||(22727530-22727598)
chr2 (135-174)||(10252472-10252511)
[»] chr1 (42 HSPs)
chr1 (44-240)||(14146302-14146496)
chr1 (45-240)||(23185429-23185622)
chr1 (45-240)||(44655743-44655936)
chr1 (44-240)||(6771793-6771990)
chr1 (45-240)||(5316682-5316875)
chr1 (45-221)||(21740852-21741029)
chr1 (48-240)||(50881432-50881621)
chr1 (45-240)||(5027551-5027746)
chr1 (51-240)||(16140057-16140244)
chr1 (45-240)||(4971536-4971729)
chr1 (45-240)||(9172940-9173134)
chr1 (45-240)||(9180922-9181116)
chr1 (45-240)||(19955719-19955912)
chr1 (48-240)||(13913401-13913593)
chr1 (45-232)||(17168966-17169151)
chr1 (45-240)||(3406420-3406614)
chr1 (45-240)||(3440206-3440400)
chr1 (45-240)||(40501707-40501901)
chr1 (127-240)||(27559639-27559752)
chr1 (45-240)||(1366797-1366989)
chr1 (44-240)||(27906645-27906828)
chr1 (45-219)||(6889634-6889805)
chr1 (45-219)||(6891480-6891651)
chr1 (62-240)||(41697072-41697248)
chr1 (44-239)||(51607357-51607550)
chr1 (44-207)||(22865377-22865538)
chr1 (128-230)||(38547035-38547137)
chr1 (134-230)||(33170771-33170867)
chr1 (127-230)||(39134720-39134824)
chr1 (127-230)||(45758506-45758609)
chr1 (127-228)||(5533326-5533428)
chr1 (127-225)||(38853539-38853637)
chr1 (128-230)||(26803960-26804059)
chr1 (127-190)||(17322621-17322684)
chr1 (134-240)||(44895654-44895754)
chr1 (128-230)||(6221690-6221791)
chr1 (135-230)||(43235774-43235871)
chr1 (127-230)||(50146308-50146411)
chr1 (135-217)||(35392295-35392376)
chr1 (51-111)||(34247155-34247216)
chr1 (176-216)||(34247066-34247106)
chr1 (45-77)||(52127460-52127492)
[»] scaffold0070 (1 HSPs)
scaffold0070 (44-240)||(1334-1528)
[»] scaffold0039 (1 HSPs)
scaffold0039 (45-240)||(106529-106723)
[»] scaffold0012 (1 HSPs)
scaffold0012 (135-230)||(206496-206591)
[»] scaffold1590 (1 HSPs)
scaffold1590 (127-230)||(257-360)
[»] scaffold0018 (1 HSPs)
scaffold0018 (134-230)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (134-230)||(38926-39022)
[»] scaffold0001 (2 HSPs)
scaffold0001 (45-185)||(183106-183244)
scaffold0001 (181-240)||(181910-181969)
[»] scaffold0182 (1 HSPs)
scaffold0182 (128-228)||(23993-24093)
[»] scaffold1320 (1 HSPs)
scaffold1320 (135-230)||(1355-1450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (127-229)||(230858-230960)
[»] scaffold0022 (2 HSPs)
scaffold0022 (127-230)||(40086-40191)
scaffold0022 (127-230)||(138146-138251)
[»] scaffold0227 (1 HSPs)
scaffold0227 (128-173)||(16123-16168)
[»] scaffold0003 (1 HSPs)
scaffold0003 (154-207)||(351360-351413)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 27079197 - 27079002
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |        |||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattt-tttttttaaaagagcaatgttcta 27079099  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||    
T  27079098 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaac 27079002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 34756289 - 34756475
Alignment:
Q  53 tccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatatt 151  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        |||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatgttctatttatatt 34756386  T
Q  152 ttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  34756387 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 34756475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 15480006 - 15480198
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| |         ||||| | ||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttt----aaagaccgatgttcta 15480101  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| |||||    
T  15480102 tttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaac 15480198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 16591990 - 16592183
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||| |        |||||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatattt---tttttaaaagagcaatgttcta 16592086  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||    
T  16592087 tttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaac 16592183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 36187794 - 36187988
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||  | | |        |||||||| |||||||    
T  36187794 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttttt---tttttaaaagagcgatgttct 36187890  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| ||| |||||    
T  36187891 atttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaac 36187988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 19523380 - 19523190
Alignment:
Q  49 gccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattta 147  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||  | | |         |||||||  |||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgtttttttttt--aaagagcggtgttctattta 19523283  T
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||    
T  19523282 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaac 19523190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 38869279 - 38869472
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||| |||| ||||||||||||  ||| |        |||||||||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 38869375  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||| |||||||| |||||    
T  38869376 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaac 38869472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 50 - 240
Target Start/End: Complemental strand, 2275070 - 2274881
Alignment:
Q  50 ccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttat 148  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||  ||| |        |||||||| |||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtattt--ttttttaaaagagcgatgttctatttat 2274973  T
Q  149 attttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||| |||||    
T  2274972 attttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaac 2274881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 9364477 - 9364282
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||  |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||  ||| |        |||||  |||||||||    
T  9364477 gcagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaag--caatgttct 9364380  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  9364379 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 9364282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 31194528 - 31194706
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||  ||| |        |||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattt---cttttaaaagagcaatgttcta 31194624  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31194625 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 16198709 - 16198903
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        |||||  ||||||||||    
T  16198709 cagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaag--caatgttcta 16198806  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  16198807 tttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 16198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 30854511 - 30854320
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||| |||| |||||||||||| || ||||||||| ||| ||| |||||||| ||||  ||| |        ||||||||||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtattt--ttttttaaaagagcaatgttctattt 30854414  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||    
T  30854413 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaac 30854320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 28822253 - 28822451
Alignment:
Q  46 agggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnn---aaaagagcaatgttc 141  Q
    |||||||||||| |||||||||||| ||||||| | |||||||||||||  ||||||||||||||||  ||| |           |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  142 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||| |||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaac 28822451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 231
Target Start/End: Original strand, 22986473 - 22986658
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||  |        |||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaatt--ttttttaaaagagcaatgttcta 22986570  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccc 231  Q
    || ||||||||||||||| |||||||| ||| ||||||||||||||||||| |  ||||||||||||||||||||||||||| |||||    
T  22986571 ttaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaaccc 22986658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 44 - 234
Target Start/End: Original strand, 16799239 - 16799430
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaa-tgttc 141  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||| | |||||||||||||||||  ||| |        ||||||| || |||||    
T  16799239 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattt-tttttttaaaagagtaaatgttc 16799337  T
Q  142 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||    
T  16799338 tatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccccca 16799430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 27924267 - 27924084
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||  || ||||||||| |||||| || ||||||||||||||||||||||||||||||||||  ||| |        |||| |||||||  |||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtattt--ttttaaaaaaaagcaatgaccta 27924170  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |||||||||||||||||||||||||||    
T  27924169 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 7671118 - 7670915
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnn------aaaagagcaat 137  Q
    ||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |              |||| ||||||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaat 7671019  T
Q  138 gttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaac 236  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||| |  |||||||||||||||||||||||||||| | ||||| |    
T  7671018 gttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T
Q  237 taac 240  Q
    ||||    
T  7670918 taac 7670915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 23284058 - 23284164
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||| |  | ||||||||||||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  227 aaccccc 233  Q
    |||||||    
T  23284158 aaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 40389537 - 40389645
Alignment:
Q  132 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccc 231  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |  ||||||||||||||||||||  |||||||||||    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  232 ccaactaac 240  Q
    ||| |||||    
T  40389637 ccacctaac 40389645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 7338102 - 7338021
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 31881348 - 31881528
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||| ||||  ||||||||||| || |||||||||| || |||| ||||||||||||  | | |        |||||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttt-tttttttaaaagagcaatgttcta 31881446  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| | || | ||||||| ||||||||||||||||||    
T  31881447 tttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||| |   |||||||| ||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  227 aa 228  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 34426007 - 34425904
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||||  | | ||||| | ||||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  227 aacc 230  Q
    ||||    
T  34425907 aacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 1366522 - 1366625
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||   |||||||| ||||||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  227 aacc 230  Q
    ||||    
T  1366622 aacc 1366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 14318382 - 14318484
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||| | |    ||||||| |||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  228 acc 230  Q
    |||    
T  14318482 acc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 2024638 - 2024738
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||| | |||||| |  | ||||||| |||||| |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  227 a 227  Q
    |    
T  2024738 a 2024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 2530901 - 2530996
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||||||||| ||||||| | |  ||||||||| ||||| ||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 10407565 - 10407464
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||| |||| |||||  ||||| |||   |||||||| |||||||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  227 aa 228  Q
    ||    
T  10407465 aa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||||||||||| | |||||||||||||||||||| ||| |||||||||||| |||||  |  ||||||||| ||||||| |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||||||||||| | |||||||||||||||||||| ||| |||||||||||| |||||  |  ||||||||| ||||||| |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 33037884 - 33037781
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||||  ||||||| |  ||||||||  | ||||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  227 aacc 230  Q
    ||||    
T  33037784 aacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 2412191 - 2412089
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| ||| |||||||||||| | || | |   |||||||| ||||| |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  228 acc 230  Q
    |||    
T  2412091 acc 2412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 23283943 - 23284010
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaa 111  Q
    ||||||||||||||||||||| ||||||| | || || ||||||||||||||||||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaa 23284010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 40794323 - 40794426
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||| |||||| ||||||||||||| |||||||| | |||||| ||||  | |||||| |  ||||||||| |||||||||||||||||     
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgaga 40794422  T
Q  227 aacc 230  Q
    ||||    
T  40794423 aacc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 24395835 - 24395741
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 229  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||| |  |||| | |  ||||||||| || |||||||| |||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 22648734 - 22648790
Alignment:
Q  129 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 185  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatg 22648790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 606258 - 606211
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtg 174  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 10543769 - 10543682
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacat 222  Q
    ||||||| | ||| ||||||||||||||||||| ||||||  ||||||||||| |||| | |  ||||||||| ||||||||||||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 11242314 - 11242417
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||||||||||  |||||||||||||||||||||  ||  ||||||||| | |||| | |  | || |||| ||||||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  227 aacc 230  Q
    ||||    
T  11242414 aacc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 41911614 - 41911716
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||| | |||  |||||||||||| |||||||||||| |||||||| |||||||||| |   || ||||| |||| |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  228 acc 230  Q
    |||    
T  41911714 acc 41911716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 40389452 - 40389518
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaa 109  Q
    |||||| | ||||| ||||||||||||||||||| || ||||||||||| | |||||||||||||||    
T  40389452 gcagggtcatccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 15639724 - 15639644
Alignment:
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||| |||||||||||||||||| |||||||||||| |||| | |  | ||||||| |||  ||||||||| |||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaacc 15639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaag 171  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 17345053 - 17344993
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 194  Q
    |||||||||||||| |||||||| |  ||||||||||| || | | |||||||||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacc 17344993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 22875039 - 22875003
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaa 170  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22875039 caatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 35080766 - 35080806
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaata 167  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 13727317 - 13727511
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        |||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatgttcta 13727414  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  13727415 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 13727511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 21479684 - 21479488
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||| ||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||| ||| ||        ||||||||||||||||    
T  21479684 gcagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttct 21479586  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  21479585 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 21479488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 21280733 - 21280539
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        |||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatgttcta 21280636  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||| |||||    
T  21280635 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaac 21280539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 27788608 - 27788800
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        ||||||||||| |||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt----ttttaaaagagcaattttcta 27788703  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  27788704 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 27788800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 19737612 - 19737804
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctat 144  Q
    ||||| |||||||||||||| | ||| ||||||  || |||||||||||||||||||||||||||||| | | |        ||||||||||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctctaggatgaaaagaggccagtgataaaatcaaaatgttttt---tttttaaaagagcaatgttctat 19737708  T
Q  145 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  19737709 ttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 19737804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 33774305 - 33774111
Alignment:
Q  46 agggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctat 144  Q
    |||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||| ||        ||||||| ||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacata-atttttttttaaaagagtaatgttctat 33774207  T
Q  145 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||| |||||    
T  33774206 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaac 33774111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 20711638 - 20711832
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||| ||||||||||||||||||||||||| | || ||||||||||||| |||| ||||||||||||  ||| |        |||||||||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtattt--ttttttaaaagagcaatgttcta 20711735  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  20711736 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaac 20711832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 30832442 - 30832636
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||  ||| |        ||||| || |||||||    
T  30832442 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---ttttaaaaagcgcgatgttct 30832538  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||| |||||||| || | |||||||||||||||||| ||||||||||||||| |||||    
T  30832539 atttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaac 30832636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 24710914 - 24711111
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnna-aaagagcaatgttct 142  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||  ||||||||||||||||  | | |          ||||||  |||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttct 24711013  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||| |||||    
T  24711014 atttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 24711111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 28075960 - 28075777
Alignment:
Q  59 agaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa--tatatatannnnnnnaaaagagcaatgttctatttatatttttt 155  Q
    |||||| |||||||||||| || |||||||||||||||||||| ||||||||||  ||| | |        |||| ||||||||||||||||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaa-agcaatgttctatttatatttttt 28075862  T
Q  156 aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| ||||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  28075861 aaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 28075777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 17354142 - 17353948
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| |||||||||||||||| || |  ||||||||||||| |||||||||||||||||  ||| |        |||| ||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattt--tttttaaaaaaagcaatgttcta 17354045  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |   ||||||||||||| ||||||||||| ||||||||| |||||    
T  17354044 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaac 17353948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 27314096 - 27314259
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||||  ||| |        ||||||||||||||||    
T  27314096 gcagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttct 27314192  T
Q  143 atttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 208  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||    
T  27314193 atttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  47 gggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatt 145  Q
    ||||||||||| | |||| |||||||||| |  || |||||||||||| |||||||||||||||||  ||  |         ||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  146 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 34397964 - 34397861
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||| |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  227 aacc 230  Q
    ||||    
T  34397864 aacc 34397861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 235151 - 235332
Alignment:
Q  53 tccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatatt 151  Q
    ||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||  ||| |         ||| ||||||| ||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtattttttttt---aaaaagcaatgatctatttatatt 235247  T
Q  152 ttttaaaagataaatacaaggtgcc--gtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    |||||||||||||||| ||||||||  |||||||| | ||||||| |  | ||||||||||||||||||||||||| ||||||||    
T  235248 ttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaaccccca 235332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 2477590 - 2477686
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| |   |||||||| ||||||||||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 6159538 - 6159442
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   |  |||| |||| ||||||||||| || |||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  139 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||| |||||||| |  | ||||||| ||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 20611889 - 20611794
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||| ||| |||||||||| ||||||||||||||| ||||||||| ||  ||| | |  ||||||||| ||||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 4037031 - 4036953
Alignment:
Q  151 tttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 229  Q
    ||||||| ||||||||||||||||||||||||||  |||||||| |  ||| || || ||||||||||| |||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactac 213  Q
    ||||| ||||||| |||||| ||||||||||| |||||||||||||| | |||||||||| |||| | |  ||||||||| |||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 19987330 - 19987277
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataa 103  Q
    ||||||| |||||||||||| |||||| | |||||||||||||| |||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa 19987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 2952136 - 2952333
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        ||||||||||||||||    
T  2952136 gcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttct 2952235  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| |||||    
T  2952236 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaac 2952333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 30883512 - 30883320
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| ||| ||        ||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttctattt 30883414  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  30883413 atattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 30883320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 45476002 - 45475808
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||  ||| |        ||||||||||||||||    
T  45476002 gcagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttct 45475906  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  45475905 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaac 45475808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 13534609 - 13534798
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        ||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttctattt 13534705  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  13534706 atattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 13534798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 13624149 - 13624338
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        ||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttctattt 13624245  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  13624246 atattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 13624338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 44 - 231
Target Start/End: Original strand, 37430075 - 37430261
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  | | |        |||||||| |||||||    
T  37430075 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttttt--ttttttaaaagagcgatgttct 37430172  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  37430173 atttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 23606548 - 23606741
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||||  ||| |        |||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 23606644  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||||| |||||    
T  23606645 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaac 23606741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 3048434 - 3048629
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        ||||||||||| | ||    
T  3048434 gcagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatatact 3048531  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| || |||||    
T  3048532 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaac 3048629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 23798179 - 23798373
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || ||| ||||||||| || ||||||||||||||  |||||         ||||||||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatatttttttt--aaagagcaatgttcta 23798276  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||| |||||    
T  23798277 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaac 23798373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 42600968 - 42600773
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||  | | |        |||| ||||||| |||    
T  42600968 gcagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgttttt--ttttttaaaaaagcaatgatct 42600871  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  42600870 atttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 42600773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 10917575 - 10917382
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |        |||| | ||||| ||||    
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattt---ttttaaaaaaaacaatgatcta 10917479  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||| |||||    
T  10917478 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaac 10917382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 41879365 - 41879172
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||  ||||||||||| ||||  ||| |        |||||| |||||||||    
T  41879365 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtattt----ttttaaaagaacaatgttct 41879270  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | |  ||||||||||||||||| ||||||||| |||||||| |||||    
T  41879269 atttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaac 41879172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 232
Target Start/End: Original strand, 5860671 - 5860848
Alignment:
Q  56 ctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnna-aaagagcaatgttctatttatatttt 153  Q
    ||||||||| |||||||||||| ||  |||||||||||| || |||||||||||||| ||| |||         ||||||||||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacata-atatttatttttaaagagcaatgttctatttatatttt 5860769  T
Q  154 ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||    
T  5860770 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacccc 5860848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 8103008 - 8102913
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| | ||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 7944521 - 7944624
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||  ||||||| |  ||||||||| ||||||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  227 aacc 230  Q
    ||||    
T  7944621 aacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 41677172 - 41677276
Alignment:
Q  127 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||| || |||||||||||| |||| |||  ||||||||| ||||| |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  226 gaacc 230  Q
    |||||    
T  41677272 gaacc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 5973106 - 5973209
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||| |  | ||||||| | ||||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  227 aacc 230  Q
    ||||    
T  5973206 aacc 5973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 11290288 - 11290185
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |  ||||||||| |||||||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  227 aacc 230  Q
    ||||    
T  11290188 aacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 39332405 - 39332507
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| ||||||||||||||  ||||| ||||||||||||||||||| | |||||| |||||||| | |  ||||||||| |||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  228 acc 230  Q
    |||    
T  39332505 acc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||||||||||| || ||||||| ||||||||||| |  ||||||||| ||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 15167414 - 15167517
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||||||||||||||| || |||  ||||||||||| |||||| |   |||||||| |||| |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  227 aacc 230  Q
    ||||    
T  15167514 aacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 5721654 - 5721560
Alignment:
Q  136 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||  ||||||||| |   |||||||| |||||||||||| |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 15078854 - 15078759
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||| |   |||||||| |||| |||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 20003728 - 20003795
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaa 111  Q
    |||||||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaa 20003795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 34789861 - 34789959
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| | |||||||||||| || | |||||||||||||||||| || ||||||||||  ||||||| |  ||||||||| |||||||||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 8646309 - 8646250
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 186  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc 8646250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 25561502 - 25561595
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||||| || ||| |   |||||||| ||| ||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacc 25561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 30674403 - 30674468
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacac 193  Q
    ||||| |||||||||||||| || |||||||||||||||| |||||| |||||||||||| |||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacac 30674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 173  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 14509983 - 14510084
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtg-aaaatgactaccgtatacatgagg 226  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| |||||| ||||||||  ||||||||| |   ||| ||||| |||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  227 aacc 230  Q
    ||||    
T  14510081 aacc 14510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 23941097 - 23941157
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 194  Q
    ||||||| |||||| |||||||||||||||||||||||||| | |||||| ||| ||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacc 23941157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 5757153 - 5757114
Alignment:
Q  158 aagataaatacaaggtgccgtatatatgcggtacacctag 197  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacctag 5757114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtg 174  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 34048705 - 34048761
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 184  Q
    ||||| |||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatat 34048761  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 33963267 - 33963313
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggc-ttgagaatgaaaa 89  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||    
T  33963267 gcagggccgttcatgagaattcggaggctcggctttgagaatgaaaa 33963313  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaata 167  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

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Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 29077404 - 29077211
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 29077308  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  29077307 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 29077211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 18776683 - 18776877
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||  |        |||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataatt--ttttttaaaagagcaatgttcta 18776780  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||| |||||    
T  18776781 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaac 18776877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 8171460 - 8171650
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||   ||| |        ||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtattt---tttttaaaagagcaatgttctattt 8171556  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| |||||    
T  8171557 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaac 8171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 20091197 - 20091392
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |        |||| | ||||| ||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaa-caatgatcta 20091295  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  20091296 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 20091392  T

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Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 12596207 - 12596398
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  | | |         ||||||| ||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttttttttt-----aaagagcgatgttcta 12596301  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||| |||||    
T  12596302 tttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaac 12596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 23550988 - 23551182
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |        |||| ||||||| ||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatattt---ttttaaaaaaagcaatgatcta 23551084  T
Q  144 tttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| |||||    
T  23551085 tttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 23551182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 44 - 194
Target Start/End: Complemental strand, 26254179 - 26254030
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||| |        ||||||||||||||||    
T  26254179 gcagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatattt--ttttttaaaagagcaatgttct 26254082  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26254081 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 26254030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 234
Target Start/End: Original strand, 10329327 - 10329515
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        |||| ||||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt--ttttaaaaaaaagcaatgttcta 10329424  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    |||||||||||||||||||||||| ||||||||||||||||| || | ||| |  ||||||||||||||||||||||||||| ||||||||    
T  10329425 tttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaaccccca 10329515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 48983755 - 48983955
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnn---aaaagagcaatgt 139  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||| |           |||| | |||||     
T  48983755 gcagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatga 48983854  T
Q  140 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaa 239  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||| ||||    
T  48983855 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaa 48983954  T
Q  240 c 240  Q
    |    
T  48983955 c 48983955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 10955672 - 10955475
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||| |||| ||||||||||||||||| ||| | | |||||| ||||| ||||||| |||||||| | | | |        |||||||| |||||||    
T  10955672 gcagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaattttttttttttttttaaaagagcgatgttct 10955573  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||    
T  10955572 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 10955475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 28749896 - 28749715
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||| ||||||||||||||||| || |||||||||||| ||| |||||||||||||| |||| |        ||||||||||| ||||    
T  28749896 gcagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatattt-ttttttcaaaagagcaatattct 28749798  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||  |||||||| ||||||||||||||||||    
T  28749797 atttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 24525598 - 24525796
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa--tatatatannnnnnnaaaagagcaatgtt 140  Q
    |||||| ||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||  ||| | |         ||| | |||||||    
T  24525598 gcagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaa-caatgtt 24525696  T
Q  141 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||| |||||    
T  24525697 ctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaac 24525796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 231
Target Start/End: Complemental strand, 19692279 - 19692094
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||| ||||| |||||||||| |||||||| ||  ||||||||| | ||||||||||||||||||  ||| |        |||||||||||||||||    
T  19692279 cagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtattt--ttttttaaaagagcaatgttcta 19692182  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccc 231  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||  ||||||||||||||||||    
T  19692181 tttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccc 19692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 47984884 - 47985081
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| ||||||||  ||||||||| || ||||||||||| |||||||||||||||||||  | | |        |||| |||||||||||    
T  47984884 gcagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaa-agcaatgttct 47984982  T
Q  143 atttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||| |||||    
T  47984983 atttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaac 47985081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 38414792 - 38414987
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||| ||||||| |||||||||||||||| || ||  ||||||||||| | ||| ||||||||||||  ||| |        |||||||||| |||||    
T  38414792 gcagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtattt--ttttgcaaaagagcaacgttct 38414889  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| |  ||||||||||||||| |||||||||||||||||||| |||||    
T  38414890 atttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaac 38414987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 232
Target Start/End: Complemental strand, 8239869 - 8239686
Alignment:
Q  47 gggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatt 145  Q
    ||||||||||| |||||| |||||||||||| ||  ||||||||||||||| ||||||||| ||||  ||| |        ||||||| |||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattt---tttttaaaagagtaatgttctatt 8239773  T
Q  146 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||||| |   |||||||||| ||||||||| ||||||||||||    
T  8239772 tatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccc 8239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 208  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 2611260 - 2611363
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||| || || ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  227 aacc 230  Q
    ||||    
T  2611360 aacc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 7398555 - 7398452
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||| | ||||||||  ||||||||| |||||| |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  227 aacc 230  Q
    ||||    
T  7398455 aacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 9021799 - 9021898
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||| |||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 25010611 - 25010424
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||  ||| |        |||| ||||||| ||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtat-tttttaaaaaaaaaagcaatgatcta 25010513  T
Q  144 tttata--ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||  |||||||||||||||||| ||||||          |||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  25010512 tttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 25010424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 219  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  | | ||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 23859169 - 23859077
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||||||||| |||||| |  | ||||||| |||||||||||||||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgagga 23859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 6765680 - 6765771
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 219  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| | |  ||||||||| |||||||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 27237421 - 27237524
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||| | |  | |||  ||||||||| |||| |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  227 aacc 230  Q
    ||||    
T  27237521 aacc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 36891674 - 36891579
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||||||||||||| ||| ||||||| |||  |||||||| ||||||| | |  ||||||||| ||||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  129 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| || ||||||||||  |||||||||  ||||||||| | ||| |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 12981422 - 12981327
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||| |||||||||  |  ||||||||| ||||| ||||| ||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacc 12981327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 18201234 - 18201138
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||||||||||  |||||||||   |||| || ||||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacc 18201138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 20153297 - 20153206
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||| |||||||||||||||||||||| |||  ||||||||||| || ||| |  | ||||||| ||| ||||||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 21763586 - 21763652
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 194  Q
    ||||| || ||||||||||| |||||||||||||||||||||| ||  |||||||||||| ||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacacc 21763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  151 tttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 229  Q
    |||||||||||||||||||||||| ||||||||||   ||||||||   |||||||| ||||||||| ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 12419493 - 12419536
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaa 170  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 40357303 - 40357364
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa 111  Q
    ||||| ||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaa 40357364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 184  Q
    ||||| ||||||| |||||| |||||||||||||||||||||| |||  ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Original strand, 42765783 - 42765813
Alignment:
Q  15 atttatgatacaatgaggcggcacgccacgc 45  Q
    |||||||||||||||||||||||||||||||    
T  42765783 atttatgatacaatgaggcggcacgccacgc 42765813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 40357413 - 40357453
Alignment:
Q  176 cgtatatatgcggtacacctagtggtgaaaatgactaccgt 216  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  40357413 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 40357453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 7e-64; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 54780968 - 54780773
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||  ||| |        |||||||||||||||||    
T  54780968 cagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt-tttttttaaaagagcaatgttcta 54780870  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  54780869 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 54780773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 34768492 - 34768685
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||| |        |||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacatattt---tttttaaaagagcaatgttcta 34768588  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||    
T  34768589 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaac 34768685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 47129172 - 47128983
Alignment:
Q  49 gccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattta 147  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||| |        |||||| ||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattt---tttttaaaagaacaatgttctattta 47129076  T
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||||    
T  47129075 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaac 47128983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 38209520 - 38209702
Alignment:
Q  57 tgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatatttttt 155  Q
    |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||  |         ||||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataattttttttt--aaagagcaatgttctatttatatttttt 38209617  T
Q  156 aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  38209618 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 38209702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 32915575 - 32915381
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    | |        |||||||| ||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggtttt--ttttttaaaagagcgatgttcta 32915478  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||| |||||||||||||||||||||||| |||||    
T  32915477 tttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaac 32915381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 34027768 - 34027575
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        |||| ||||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---ttttaaaaaaagcaatgttcta 34027672  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||| |||||||||||||||||||| |||||    
T  34027671 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaac 34027575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 10979093 - 10978896
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||| ||||||||||||||| |  ||| || |||||||||||||  ||||||||||||||||  ||| |        ||||||||||||||||    
T  10979093 gcagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttct 10978994  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||    
T  10978993 atttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaac 10978896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 45 - 239
Target Start/End: Original strand, 2790659 - 2790851
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||| || ||||||||||||||||||| || |||||||||||| |||||||||||||||||| || | |        |||||| ||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattttt---tttttaaaagaacaatgttcta 2790755  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaa 239  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||    
T  2790756 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 43455463 - 43455642
Alignment:
Q  59 agaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatattttttaa 157  Q
    |||||||||||||||| || || ||||||||||||| |||||||||||||||||  ||| ||       |||||||||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtat-tattttt--aaaagagcaatgttctatttatattttttaa 43455559  T
Q  158 aagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  43455560 aagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 43455642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 37777140 - 37777334
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| |||||| | ||||||||||||||||| || ||||||||||||| |||||||||||||||||  ||| |        |||| || |||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt--tttaaaaaaaaagtaatgttcta 37777237  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||    
T  37777238 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaac 37777334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 37514848 - 37514655
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctat 144  Q
    |||||||||||||||||||| |||||||| ||  | |||||||||||||||||||||||||||||||  ||| |        ||| |||| |||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagcggg-gaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaa-gagcgatgttctat 37514751  T
Q  145 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| ||| ||||| |||||    
T  37514750 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaac 37514655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 48209437 - 48209236
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaa-----atcaaaatatatatannnnnnnaaaagagcaat 137  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||| |||||||||||     |||||||  ||| |        |||||||||||    
T  48209437 gcagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattt-tttttttaaaagagcaat 48209339  T
Q  138 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaact 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||| |||||||| ||    
T  48209338 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacct 48209239  T
Q  238 aac 240  Q
    |||    
T  48209238 aac 48209236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 32128775 - 32128580
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| |||||| |||||||||||| || ||||||||| ||| |||||||||||||||||  ||| |        ||||||||||||||||    
T  32128775 gcagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtattt--ttttttaaaagagcaatgttct 32128678  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||||||||||||||||||||| || |||||||| |||||    
T  32128677 atttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaac 32128580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 1105717 - 1105528
Alignment:
Q  49 gccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattta 147  Q
    ||||||| ||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  ||| |        |||||||  ||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagtgatgttctattta 1105621  T
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||    
T  1105620 tattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaac 1105528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 5128757 - 5128953
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||||||||| ||| |  | |        | |||||| || ||||    
T  5128757 gcagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaa-acgtttttttttttagaagagcgatattct 5128855  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||| || |||||||||||||||||||||||||||||||| ||| |||||    
T  5128856 atttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaac 5128953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 54083159 - 54083345
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||| |        |||| | ||||| |||    
T  54083159 gcagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtattt---ttttaaaaaaaacaatgatct 54083255  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |  | | ||||||||||||||||||||||||||||||    
T  54083256 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccc 54083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 10428116 - 10428316
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||  |||||||||||||||||||| || ||||||||||||| ||||| |||||||||||| ||| |         ||| ||||||||||||    
T  10428116 cagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttatttttttt----aaaaagcaatgttcta 10428211  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctag--------tggtgaaaatgactaccgtatacatgaggaacccccaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        | ||||||||||||||||||||||||||||||| |||     
T  10428212 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctccac 10428311  T
Q  236 ctaac 240  Q
    |||||    
T  10428312 ctaac 10428316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 16845210 - 16845017
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| ||  |||||||| || ||||||||||||||||||  ||| |        |||||||||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaag-ccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 16845115  T
Q  144 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| |||||||||||| |||||| ||||||||||  ||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  16845114 tttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaac 16845017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 17679590 - 17679432
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||| |||||||||||||||||||| | || |||||||||||| ||||||||||||||||||  ||| |        ||||||||||| ||||    
T  17679590 gcagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtattt---tttttaaaagagcaatattct 17679494  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  17679493 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 19498691 - 19498500
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||| || |||||||||||||||||||  || |||||||| |||||| ||||||||||||||  ||| |        |||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgtattt---tgtttaaaagagcaatgttcta 19498595  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||| | |  ||||||||||||||| |||||||||||||||||||| |||||    
T  19498594 tttatattttttaaaagataaatataaggtgccgt--atatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaac 19498500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 55255448 - 55255265
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||        |||||||||||||||     
T  55255448 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacata-at-tttttttaaaagagcaatgttcc 55255351  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||             |||| || |||||||||||||||||||||||||||||||||||| |||||    
T  55255350 atttatattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 55255265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 35779248 - 35779426
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||| |||||||||||||| ||| || ||| ||||||||||||| ||||||||||||||||  ||| |         ||||||||||||||||||     
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt----aaagagcaatgttctatt- 35779342  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  35779343 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 35779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 35465284 - 35465103
Alignment:
Q  56 ctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatattttt 154  Q
    |||||||||||||||||||  | || ||||||||||||| ||||||||||||||||| |||| |        |||||| ||||||| |||||||||||||    
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatattt---tttttaaaagaacaatgttatatttatattttt 35465188  T
Q  155 taaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    || |||||||||| ||||||| ||||||||||||||||||||   |||||||| |||||||||||||||||||| ||||| |||||    
T  35465187 tacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaac 35465103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 13460306 - 13460203
Alignment:
Q  137 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaac 236  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||| |    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  237 taac 240  Q
    ||||    
T  13460206 taac 13460203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 16882312 - 16882506
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| |||||||||||||||||||  || |||||||||| | |||||||||||||||||  ||| |        |||| | |||||||||    
T  16882312 gcagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtattt---ttttaaaaaaaacaatgttct 16882408  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||| ||||||||||||||||| |||||||||| ||||| ||||||||| |  ||||||||||||||||||||  ||| ||||||| || |||||    
T  16882409 atttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaac 16882506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 40089714 - 40089512
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||| ||||||| ||||||||||||||||||| |  ||||||||||| | |||||||||||||||||  ||| |        |||| ||||||||| ||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattt---tttttaaaaaagcaatgtttta 40089618  T
Q  144 tttatattt---------tttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    |||||||||         ||||||||||||||| |||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||    
T  40089617 tttatatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaaccccca 40089518  T
Q  235 actaac 240  Q
     |||||    
T  40089517 cctaac 40089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 194  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 16922245 - 16922386
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||||||||||||||  | | |        |||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttt-tatttttaaaagagcaatgttcta 16922343  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgc 186  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  16922344 tttatattttttaaaagataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 51964897 - 51964736
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||| ||| ||| ||||||||| ||||||| || |||||||||||||||  ||||||||||||||  ||| |        ||||||||||||||||||||    
T  51964897 ggccatccttgaaaattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgtattt---tttttaaaagagcaatgttctattt 51964801  T
Q  147 atatttttt---aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 208  Q
    |||||||||   |||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  51964800 atattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 52468395 - 52468292
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||   |||| | |  ||||||||| |||||||||| |||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  227 aacc 230  Q
    ||||    
T  52468295 aacc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||| |||||| |||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 23508427 - 23508564
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||| |||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |         || |||||||||||||    
T  23508427 caggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattt--tttttttaatgagcaatgttcta 23508524  T
Q  144 tttat-attttttaaaagataaatacaaggtgccgtatat 182  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  23508525 tttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 27112132 - 27112036
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| |   |||||||| ||||||||||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 10041998 - 10042101
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||||||| |||| | ||||||||   |||||||| ||||||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  227 aacc 230  Q
    ||||    
T  10042098 aacc 10042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 9578662 - 9578728
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggt-gccgtatatatgcggtaca 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 36118463 - 36118559
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||| |    ||||||| ||||||||||||||||| ||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacc 36118559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 23509846 - 23509909
Alignment:
Q  177 gtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaac 23509909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 24969536 - 24969433
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||          |||||||||| |  ||||||||||||||||||||||||||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T
Q  227 aacccccaactaac 240  Q
    |||||||| |||||    
T  24969446 aacccccacctaac 24969433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 36178774 - 36178684
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 224  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||| |   |||||||| |||||| |||||||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 38352189 - 38352366
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttata 149  Q
    ||||||| ||||||||||||||||||| || ||||||||||||  |||||||||||||||||  ||| |         ||| || |||| ||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtattt---ttttttaaaaagtaatgatctatttata 38352285  T
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||| ||||||          |||||||||| |  |||||||||||||||||| ||||||||||||||||| |||||    
T  38352286 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaac 38352366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 207  Q
    |||||| |||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||||| |  |||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 24397043 - 24396940
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||| || |||||| ||||||||||||||||||| ||||||| ||||||||| | |||||  |  ||||||||| |||| |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  227 aacc 230  Q
    ||||    
T  24396943 aacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 2135326 - 2135422
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||| | |  ||| || || |||| |||||| ||||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacc 2135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 37744916 - 37745011
Alignment:
Q  136 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||| ||||| |||||||||||||| |||||| || ||||||||| |||| | |  ||||||||| |||||||||||| |||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 39329390 - 39329492
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||||||  ||||||||| | |||||| |  | |||||||   ||||||||||| ||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggagg 39329489  T
Q  227 aac 229  Q
    |||    
T  39329490 aac 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 24969786 - 24969719
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa 111  Q
    ||||||||||||| |||||||||||||||| || || |||||||||||||| |||||||||| |||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaa 24969719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 36362869 - 36362928
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 186  Q
    |||||| ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgc 36362928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaag 171  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 40217327 - 40217276
Alignment:
Q  141 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 192  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| ||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgataca 40217276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 29425187 - 29425237
Alignment:
Q  142 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 192  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||| |||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtaca 29425237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaataca 169  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 45656277 - 45656224
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcg 187  Q
    ||||||| |||||| |||||||||||||||||| ||||||| | ||||||||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcg 45656224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 9578575 - 9578635
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaa 104  Q
    ||||||||||| |||||||||||||||||| || || || ||||||||||| |||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaa 9578635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 15735189 - 15735142
Alignment:
Q  137 tgttctatttatattttttaaaagataaatacaaggtgccgtatatat 184  Q
    ||||||||||| |||||||||||||||||||||||  | |||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat 15735142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 11906904 - 11906954
Alignment:
Q  142 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 192  Q
    |||||| ||||||  ||||||||||||||||| ||||||||||| ||||||    
T  11906904 tatttaaatttttataaagataaatacaaggtaccgtatatatgtggtaca 11906954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 980395 - 980363
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct 77  Q
    |||| ||||||||||||||||||||||||||||    
T  980395 caggaccgtccctgagaattcggaggctcggct 980363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 7e-64; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 21582960 - 21582765
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||| |        |||||| ||||||| ||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattt-tttttttaaaagaacaatgtttta 21582862  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  21582861 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 21582765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 54619121 - 54619315
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||| |||| |||||||||||||| |||  |        |||||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataatt--ttttttaaaagagcaatgttcta 54619218  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  54619219 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 54619315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 38681011 - 38681205
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        |||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatgttcta 38681108  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||||| ||||| |||||    
T  38681109 tttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaac 38681205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 36715942 - 36716137
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||| ||| ||        |||||||||||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacata-atttttatttaaaagagcaatgttcta 36716040  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||| ||||| ||||||| |||||    
T  36716041 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaac 36716137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 47467872 - 47467678
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||  | | |         ||||||| ||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgtttttttttt--aaagagcgatgttcta 47467775  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  47467774 tttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 47467678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 3953816 - 3954008
Alignment:
Q  46 agggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctat 144  Q
    ||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||| ||||| ||| |        |||||| |||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgtattt---tttttaaaagaacaatgttctat 3953912  T
Q  145 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||| |||||    
T  3953913 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaac 3954008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 27078485 - 27078673
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||||||||||||||||| ||| ||        |||| |||||||||||    
T  27078485 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27078583  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||    
T  27078584 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 27084282 - 27084470
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||||||||||||||||| ||| ||        |||| |||||||||||    
T  27084282 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27084380  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||    
T  27084381 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 45 - 232
Target Start/End: Original strand, 8073257 - 8073442
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||  ||| |        ||||||| |||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagtaatgttcta 8073353  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |   |||||||||||||||||||||||||||||||||    
T  8073354 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccc 8073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 42098989 - 42098803
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgagaa-tgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||| |||||| ||| | ||| ||||||||||||||||||||||||||||| | | |        |||||||| ||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtcttt--ttttttaaaagagcgatgttcta 42098892  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  42098891 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 43207157 - 43207349
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||| | ||||  ||| |        |||||||||||||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattt---tttttaaaagagcaatgttcta 43207253  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| |||||    
T  43207254 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 43207349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 233
Target Start/End: Original strand, 50939151 - 50939338
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||| |        |||| ||||||| |||    
T  50939151 gcagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattt---ttttaaaaaaagcaatgatct 50939247  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccc 233  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||| |  ||| |||||||||||||||||||||||||||||||    
T  50939248 atttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaaccccc 50939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 34290554 - 34290748
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| | ||||||||||||||||||| || ||||||||||| | |||||||||||||||||  ||| |        |||| | ||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtattt--ttttttaaaaaaacaatgttcta 34290651  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||| |||||    
T  34290652 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaac 34290748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 37168551 - 37168361
Alignment:
Q  49 gccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattta 147  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| |        |||| | ||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt--ttttttaaaaaaacaatgttctattta 37168454  T
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||| |  ||||||||||||||||||||||||||||||| |||| |||||    
T  37168453 tattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaac 37168361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 44708660 - 44708471
Alignment:
Q  49 gccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattta 147  Q
    ||||||||| |||||||||||||||  || || |||||||||||||||||||||||||||||||  ||| |        |||| || |||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtattt---ttttaaaaaaagaaatgttctattta 44708564  T
Q  148 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  44708563 tattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 44708471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 53506802 - 53506996
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| | |||||||| |||||||||| || ||||||| ||||||||||||||||||||||| |||| |        |||| | ||||||||||    
T  53506802 cagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaa-caatgttcta 53506899  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||| |||||||| |||||    
T  53506900 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaac 53506996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 53149235 - 53149426
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    ||||||| |||||||||||||||||| | | | | ||||||||||| ||||||||||||||||||  | | |        |||||||| |||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgttttt--ttttttaaaagagcgatgttctattt 53149332  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || | | |||||||||||||||||||||||||||||||| |||||    
T  53149333 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaac 53149426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 54407072 - 54407269
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagag-caatgttc 141  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||  | | |        |||| |  ||||||||    
T  54407072 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttc 54407171  T
Q  142 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||| || |||||||| |||||    
T  54407172 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaac 54407269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 234
Target Start/End: Original strand, 50258541 - 50258730
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||||||||  ||||||||||||||||| |||| |        |||||||| |||||||    
T  50258541 gcagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatattt---ttttaaaaagagcgatgttct 50258637  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctag-tggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |  ||||||||||||||  |||| |||||||||||||||    
T  50258638 atttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaaccccca 50258730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 18372658 - 18372473
Alignment:
Q  57 tgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatatttttt 155  Q
    |||||||||||||||||| |  || ||||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttctatttatatttttt 18372562  T
Q  156 aaaagataaatacaaggtgccgtatatat----gcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||| |||||||||    |||||||||  || |||||||||||||||||||||||||||||| ||||| |||||    
T  18372561 aaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaac 18372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 36606149 - 36605973
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||| |||||||||| |||||| ||  |||||||||||| |||||||||||||||||  ||| |        || |||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaatagagcaatgttctattt 36606053  T
Q  147 atattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||    
T  36606052 atattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

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Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 9878686 - 9878799
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |  |||||||||||||| ||||||||| |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  227 aacccccaactaac 240  Q
    |||||||| |||||    
T  9878786 aacccccatctaac 9878799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 29620423 - 29620500
Alignment:
Q  163 aaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||||||| |||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 29620500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 54574826 - 54574929
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||| |   || ||||| |||||| |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  227 aacc 230  Q
    ||||    
T  54574926 aacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 8420425 - 8420330
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |   |||||||| ||| ||||||| | ||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacc 8420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 234
Target Start/End: Complemental strand, 48157310 - 48157139
Alignment:
Q  51 cgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttata 149  Q
    ||||||| ||||||||||||||||| |  | |||| |||||||||||||||||||||||||| | || |        ||||  |||||| ||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacattt---ttaaaaaaaatgcaatgatctatttata 48157214  T
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccca 234  Q
    |||||||||||||||||| ||||||          |||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  48157213 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaaccccca 48157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 32319162 - 32319257
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||| |  ||||||||| |||| | |||| | ||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacc 32319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 28689368 - 28689458
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||| || | | |  ||||||||| ||| |||||||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaat 106  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  139 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 192  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 42453511 - 42453442
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccta 196  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacaccta 42453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 49393195 - 49393099
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||| | ||||||||||  ||||||| |  ||| ||||| |||||||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 26279649 - 26279590
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 186  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgc 26279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 25855527 - 25855426
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||  || |||| |  | ||||||| ||||||||||||| || ||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaaga 25855429  T
Q  228 acc 230  Q
    |||    
T  25855428 acc 25855426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 48720429 - 48720496
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa 111  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||  ||||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaa 48720496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 52374763 - 52374660
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||   | |||||||||| ||| |||||| ||||| |||| |||  || |||||| |||||||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  227 aacc 230  Q
    ||||    
T  52374663 aacc 52374660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 790042 - 789940
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||| ||||||||| ||||||||||  |||||||||||||| | ||||||||  ||||||| |  ||| ||||| || ||| ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  228 acc 230  Q
    |||    
T  789942 acc 789940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 7e-64; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 3155401 - 3155207
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgagaa-tgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||||||||||||||| | || |||||||||| |||||||||||| |||| |||  |        |||||||||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataatt--ttttttaaaagagcaatgttcta 3155304  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  3155303 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 3155207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 4506078 - 4505884
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||  |        |||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatt--ttttttaaaagagcaatgttcta 4505981  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||||    
T  4505980 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaac 4505884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 6965186 - 6964997
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||  | |        ||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaataatttt----ttttaaaagagcaatgttctattt 6965091  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  6965090 atattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 6964997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 12337365 - 12337560
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||| ||        |||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatata-atttttttttaaaagagcaatgttcta 12337463  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  12337464 tttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 12337560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 8906996 - 8907191
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||        ||||||| |||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagtaatgttcta 8907094  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||    
T  8907095 tttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaac 8907191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 45 - 233
Target Start/End: Complemental strand, 24410623 - 24410434
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||||  ||| |         ||| | ||||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttcta 24410524  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccc 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  24410523 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccc 24410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 27506659 - 27506852
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |        |||| ||||||| ||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattt---tttaaaaaaaagcaatgatcta 27506755  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| |  ||| ||||||||||| ||||||||||||||| |||| |||||    
T  27506756 tttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaac 27506852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 29939781 - 29939974
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||| ||||||||||||||||| |||||||||| || |||| |||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 29939877  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||| |||||    
T  29939878 tttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaac 29939974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 3953189 - 3952996
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggcttgagaa-tgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||| |||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||||||||| ||| |         ||||| | |||||||    
T  3953189 gcagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt----aaagaccgatgttct 3953094  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||||| ||||||||||||||| |||||    
T  3953093 atttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaac 3952996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 26716313 - 26716118
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggctt-gagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||  |||||||||| | ||||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtattt--ttttttaaaagagcaatgttcta 26716216  T
Q  144 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  26716215 tttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 26716118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 40636322 - 40636164
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||| ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||| |        ||||||||||||||||    
T  40636322 gcagagccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatattt---tttttaaaagagcaatgttct 40636226  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 204  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  40636225 atttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 7162967 - 7162782
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||| |||| |||||| ||| | | ||||||||||||||||||||||||| ||||| | | |        |||||||| ||||||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtcttt---tttttaaaagagcgatgttcta 7162871  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||| ||||||||||||    
T  7162870 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccc 7162782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 10762488 - 10762677
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||| |||||| |||||||| ||| || |||||||||||||||||||||||||| ||||  | | |         |||||||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgtttttttttt----aaagagcaatgttctattt 10762583  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  10762584 atattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 10762677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 9046213 - 9046019
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||  ||||||||  ||||| ||| || |||| ||||||||||||||||||||||||||  |||          |||||| ||||||||||    
T  9046213 cagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgtat---tgtttttaaaagaacaatgttcta 9046117  T
Q  144 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  9046116 tttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 9046019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 34694155 - 34693991
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    ||||||||||||||||||||||| |||| | ||  |||||||||||||| |||||||||||||||  ||| |        ||||||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattt---tttttaaaagagcaatgttctattt 34694059  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactacc 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  34694058 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 34716567 - 34716403
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    ||||||||||||||||||||||| |||| | ||  |||||||||||||| |||||||||||||||  ||| |        ||||||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattt---tttttaaaagagcaatgttctattt 34716471  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactacc 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  34716470 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||| ||||||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  227 aa 228  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 16097111 - 16097008
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |  ||||||||| |||||| |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  227 aacc 230  Q
    ||||    
T  16097011 aacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 204
Target Start/End: Original strand, 5952642 - 5952791
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttata 149  Q
    |||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||||||||  ||| |        |||||||||||||| |||||||     
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgtattt---tttttaaaagagcaatgttatatttat- 5952737  T
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 204  Q
     |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5952738 -tttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 38400899 - 38400798
Alignment:
Q  129 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaa 228  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||   |  ||||||||| ||||||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  229 cc 230  Q
    ||    
T  38400799 cc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||| | |||| | |   |||||||| ||||||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  227 aacc 230  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 13800543 - 13800647
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca-cctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| || |  ||||||||| |||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  226 gaacc 230  Q
    |||||    
T  13800643 gaacc 13800647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 12134039 - 12134142
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |   ||||||||||||||||||||| ||||||||||||| |||||| |   |||||||| |||||||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  227 aacc 230  Q
    ||||    
T  12134139 aacc 12134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 28425709 - 28425812
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||||| ||||||| |   |||||||| |||||| |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  227 aacc 230  Q
    ||||    
T  28425809 aacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 1396617 - 1396730
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||| ||| |||||||||||||||||| || ||  |||||||||||||||||||||||||||||| ||| ||        |||||||||||||||||    
T  1396617 cagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacata-at-tttttttaaaagagcaatgttcta 1396714  T
Q  144 tttatattttttaaaa 159  Q
    ||||||||||||||||    
T  1396715 tttatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 16227368 - 16227470
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||| | |||||| |  | ||||||| |||||  ||||||| ||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  228 acc 230  Q
    |||    
T  16227468 acc 16227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 7742132 - 7742236
Alignment:
Q  127 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||| | |||||||||| |||| | |  ||||||||  |||| ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  226 gaacc 230  Q
    |||||    
T  7742232 gaacc 7742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 42029247 - 42029168
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 207  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||| | |||| |||  |||||||||  |||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 11912757 - 11912859
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| ||||   |||| |||||||||| |||||||||||||||  |||| | |  | ||||||| |||||||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  228 acc 230  Q
    |||    
T  11912857 acc 11912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 37182739 - 37182670
Alignment:
Q  161 ataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||| |||||||||||  |||||| |   |||||||| ||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 8327721 - 8327674
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtg 174  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  8327721 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatac 168  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 184  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| ||| |||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  156 aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 224  Q
    ||||||||||||| | ||| ||||||||||||||||||| |   |||||||| |||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 10252511 - 10252472
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtg 174  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtg 10252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 14146496 - 14146302
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||  ||| |        |||||||| |||||||    
T  14146496 gcagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcgatgttct 14146400  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| |||||    
T  14146399 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaac 14146302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 23185622 - 23185429
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgagaat-gaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||  ||| |        |||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 23185526  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  23185525 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaac 23185429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 44655936 - 44655743
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||| |||   |       |||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacata---atttttttaaaagagcaatgttcta 44655840  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||||    
T  44655839 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaac 44655743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 6771990 - 6771793
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  | | |         ||||||| |||||||    
T  6771990 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttct 6771891  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||| |||||    
T  6771890 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaac 6771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 5316875 - 5316682
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||| ||||||||| | | || |||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcaatgttcta 5316779  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  5316778 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 5316682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 21740852 - 21741029
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |        |||||||||||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttcta 21740951  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtataca 221  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||    
T  21740952 tttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 50881621 - 50881432
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||| ||| |        ||||||||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctattt----ttttaaaagagcaatgttctattt 50881526  T
Q  147 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||| |||||    
T  50881525 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaac 50881432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 5027746 - 5027551
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||||||||||||||||||||||| || | | ||||||||||||||||||||||||||||||  ||| |        |||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattt-tttttttaaaagagcaatgttcta 5027648  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||||||||||| |||||    
T  5027647 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaac 5027551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 51 - 240
Target Start/End: Complemental strand, 16140244 - 16140057
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttata 149  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  ||| |        |||||||  ||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtattt---tttttaaaagagtgatgttctatttata 16140148  T
Q  150 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  16140147 ttttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaac 16140057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 4971536 - 4971729
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| |||||||||||||| ||||||||| | | | ||||||||||| |||||||||||||||||| |||| |         ||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatattttttttt---aaagagcaatgttcta 4971632  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||| |||||    
T  4971633 tttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaac 4971729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 9172940 - 9173134
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||| | ||||| ||| |        ||||   ||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9173037  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| |||||    
T  9173038 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 9173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 9180922 - 9181116
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||| | ||||| ||| |        ||||   ||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9181019  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| |||||    
T  9181020 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 9181116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 19955912 - 19955719
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||   || |         ||| ||||||| ||||    
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaattttttttt---aaaaagcaatgatcta 19955816  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||| |||||    
T  19955815 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaac 19955719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 13913401 - 13913593
Alignment:
Q  48 ggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctattt 146  Q
    |||||||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||| |        |||| ||||||| |||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattt---tttttaaaaaagcaatgatctattt 13913497  T
Q  147 atattttttaaaagataaatacaaggtgccg--tatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||| ||| |||||  |||||||||||||||||||   |||||||||||||||||||||||||| |||||||| |||||    
T  13913498 atattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaac 13913593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 17169151 - 17168966
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||||||||  ||| |        |||| ||||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattt---ttttaaaaaaagcaatgttcta 17169055  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccc 232  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  17169054 tttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccc 17168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 3406614 - 3406420
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| ||||||||||||| |||||||| ||| | | |||||||||||| |||||||||||| ||||  | | |        |||||||| ||||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttttt--ttttttaaaagagcgatgttcta 3406517  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | |||||||||||||||||||||||||||||||||||| |||||    
T  3406516 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaac 3406420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 3440206 - 3440400
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggcttgag-aatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||| ||||||||||||| |||||||| ||| | | |||||||||||| |||||||||||| ||||  | | |        |||||||| ||||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttttt--ttttttaaaagagcgatgttcta 3440303  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | |||||||||||||||||||||||||||||||||||| |||||    
T  3440304 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaac 3440400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 40501707 - 40501901
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||||||||  ||| |        |||| || |||| ||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattt--tttaaaaaaaaagtaatgatcta 40501804  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||| |||||||||||||||||||||| ||||| ||| |||||    
T  40501805 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaac 40501901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 27559752 - 27559639
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  227 aacccccaactaac 240  Q
    |||||||| |||||    
T  27559652 aacccccacctaac 27559639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 1366797 - 1366989
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    |||||||||| ||  ||||| |||||||| ||| || |||||||||||||||||||||||| | |||| |||| |          |||||||||||||||    
T  1366797 cagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatattttttttt----aagagcaatgttcta 1366892  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  | ||||||||||||||||||||| |||||||||||| |||||    
T  1366893 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaac 1366989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 27906645 - 27906828
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||        |||||||||||||||     
T  27906645 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacata-at-tttttttaaaagagcaatgttcc 27906742  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||||||||||||||             |||| || |||||||||||||||||||||||||||||||||||| |||||    
T  27906743 atttatattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaac 27906828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 6889805 - 6889634
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtattt----ttttaaaagagcaatgttcta 6889710  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 219  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||| | || ||||||||||| | |||||||    
T  6889709 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 6891651 - 6891480
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||  ||| |        |||||||||||||||||    
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtattt----ttttaaaagagcaatgttcta 6891556  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 219  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||| | || ||||||||||| | |||||||    
T  6891555 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 240
Target Start/End: Original strand, 41697072 - 41697248
Alignment:
Q  62 attcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttctatttatattttttaaaag 160  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||||||||  ||| |        |||||||| |||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcgatgttctatttatattttttaaaag 41697168  T
Q  161 ataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||| ||  ||||||||||| ||||| | ||  ||||||||||||||||||||||||||||||||||| |||||    
T  41697169 ataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaac 41697248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 51607357 - 51607550
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    ||||| |||||||| | ||||||||||||||||| || ||||||||||||| |||||||||||||||||  ||| |        |||| |  |||||| |    
T  51607357 gcaggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt----ttttaaaaaaaaaatgtttt 51607452  T
Q  143 atttatattttttaaaagataaatacaaggtg-ccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaa 239  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |   |||||||||||||||||||||||||||||| |||| ||||    
T  51607453 atttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaa 51607550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 207
Target Start/End: Original strand, 22865377 - 22865538
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||| || ||||||||||||||  ||| |        ||||||||||||||||    
T  22865377 gcagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattt--tttttcaaaagagcaatgttct 22865474  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 207  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||||||| |  |||||||||    
T  22865475 atttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 38547035 - 38547137
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |   |||||||| |||| | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  228 acc 230  Q
    |||    
T  38547135 acc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 33170867 - 33170771
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||| |||||| |||||||||||  ||||||||| |||  |||||||||||||||||| | |||||||||| ||||||||||||||||| ||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 39134720 - 39134824
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||  |||||| |  ||||| ||| ||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  226 gaacc 230  Q
    |||||    
T  39134820 gaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 45758609 - 45758506
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||  |||||||||   |||| | |  ||||||||| ||||||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  227 aacc 230  Q
    ||||    
T  45758509 aacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  127 aaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| |||| ||||||||| ||||||| |||||||||| |||||||||||||||||||  |||||   |  ||||||||| |||||||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  226 gaa 228  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 38853637 - 38853539
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 225  Q
    |||||| || ||||||||||| |||||||||| ||||||||||||||| ||||||||||  ||| | | |  ||||||||| |||||||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 26804059 - 26803960
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| ||||| | |||||| ||||||||||||||||||||||| || |||||||||||| |||||     ||||||||| ||||||||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggta 190  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 44895754 - 44895654
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaaccccc 233  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||  |      |||||||| |  ||||||||||| |||||||||||||||||||||||    
T  44895754 caatgatctatttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccccc 44895661  T
Q  234 aactaac 240  Q
    | |||||    
T  44895660 acctaac 44895654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 6221791 - 6221690
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||| | |   |||||||| | || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  228 acc 230  Q
    |||    
T  6221692 acc 6221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 43235774 - 43235871
Alignment:
Q  135 aatgttctatttatatttttta--aaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| |||||||   ||||||||||||||| || ||||||||||  ||||||| |  ||||||||| |||| |||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 50146411 - 50146308
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| | ||||| |||||||||| ||||||||||| |||||| | || ||| |  ||| ||||| | |||| |||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagg 50146312  T
Q  227 aacc 230  Q
    ||||    
T  50146311 aacc 50146308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgta 217  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||||||||||||| | | |  ||||||||| |||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 34247216 - 34247155
Alignment:
Q  51 cgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaa 111  Q
    ||||| ||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaa 34247155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 34247106 - 34247066
Alignment:
Q  176 cgtatatatgcggtacacctagtggtgaaaatgactaccgt 216  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  34247106 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 34247066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 52127460 - 52127492
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct 77  Q
    |||| ||||||||||||||||||||||||||||    
T  52127460 caggaccgtccctgagaattcggaggctcggct 52127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 1528 - 1334
Alignment:
Q  44 gcagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttct 142  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||  ||| |        ||||||||| ||||||    
T  1528 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattt---tttttaaaagagcactgttct 1432  T
Q  143 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| |||||    
T  1431 atttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaac 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 106723 - 106529
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||  ||| |        |||||| ||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattt--ttttttaaaagaacaatgttcta 106626  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||    
T  106625 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaac 106529  T

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Target: scaffold0012 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 206496 - 206591
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

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Target: scaffold1590 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 257 - 360
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |   |||||||| |||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  227 aacc 230  Q
    ||||    
T  357 aacc 360  T

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Target: scaffold0018 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 173516 - 173612
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| |  ||| ||||| |||||||||||| |||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

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Target: scaffold0097 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 39022 - 38926
Alignment:
Q  134 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||  |   |||||||| ||||||||||| ||||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

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Target: scaffold0001 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 183244 - 183106
Alignment:
Q  45 cagggccgtccctgagaattcggaggctcggct-tgagaatgaaaagaggccagtgataaaatcaaaatatatatannnnnnnaaaagagcaatgttcta 143  Q
    ||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||| ||||  ||| |        |||||||  ||||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgtattt---tttttaaaagagagatgttcta 183148  T
Q  144 tttatattttttaaaagataaatacaaggtgccgtatatatg 185  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  183147 tttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 181969 - 181910
Alignment:
Q  181 atatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacccccaactaac 240  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||||| |||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaac 181910  T

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Target: scaffold0182 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 227  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |   |||||||| | |||||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  228 a 228  Q
    |    
T  24093 a 24093  T

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Target: scaffold1320 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 1450 - 1355
Alignment:
Q  135 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 230  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||| |   |||||||| |||| |||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

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Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  127 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 226  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||||||  ||||||||||| || ||| |  ||||||||| |||||| |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  227 aac 229  Q
    |||    
T  230958 aac 230960  T

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Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 40191 - 40086
Alignment:
Q  127 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 224  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||    ||||||||| || | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  225 ggaacc 230  Q
    | ||||    
T  40091 gcaacc 40086  T

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Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 138251 - 138146
Alignment:
Q  127 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 224  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||    ||||||||| || | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  225 ggaacc 230  Q
    | ||||    
T  138151 gcaacc 138146  T

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Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 16168 - 16123
Alignment:
Q  128 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 173  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaaggt 16123  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  154 ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 207  Q
    ||||||||||||||||||||| ||||||||||  ||||||| |  |||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

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