View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6074_low_38 (Length: 239)
Name: NF6074_low_38
Description: NF6074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6074_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3466786 - 3467016
Alignment:
| Q |
1 |
tcttgccgttctctttagcctctcatttgcgaatttgtaccggaaatgatcggttatgtacctcaagttttgagcatcaagaccgaatgcttcagttgat |
100 |
Q |
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| T |
3466786 |
tcttgccgttctctttagcctctcatttgcgaatttgtaccggaaatgatcggttatgtacctcaagttttgagcatcaagaccaaatgcttcagttgat |
3466885 |
T |
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| Q |
101 |
tcaagacaaacaaatgtggccgaggaagctggaagccggtcgataaaagggcgtctaaggcaccaagaaagtagttcgtcgcctaagaaacctcctggtt |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
3466886 |
tcaagacaaacaaatgtggccgaagaagctggaagccggtcaataaaaggacgtctaaggcaccaagaaagtagttcatcgcctaagaaacctcctggtt |
3466985 |
T |
|
| Q |
201 |
cgaggacactagttgctacaattcctttgct |
231 |
Q |
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||||||||||||| || ||||| |||||||| |
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| T |
3466986 |
cgaggacactagtcgcgacaatgcctttgct |
3467016 |
T |
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