View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6075_high_5 (Length: 295)
Name: NF6075_high_5
Description: NF6075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6075_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 1374854 - 1374576
Alignment:
| Q |
1 |
cttcgattgaggccttttccctaacaagacggtcaatttcgatgtgttttgttcgttcatagagggaagaattggatgcgatgtagtgagcagaccggcc |
100 |
Q |
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| T |
1374854 |
cttcgattgaggccttttccctaacaagacggtcaatttcgatgtgttttgttcgttcatagagggaagaattggatgcgatgtagtgagcagaccggcc |
1374755 |
T |
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| Q |
101 |
atcaacggtataataaagattggaaaatgaaaagtaaatgggaatcatactgaaggtatgtaagccattgcaaacagtagaaggtaagaggcctgatatt |
200 |
Q |
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| T |
1374754 |
atcaacggtataataaagattggaaaatgaaaagtaaatgggaatcatactgaaggtatgtaagccattgcaaacagtagaaggtaagaggcctgatatt |
1374655 |
T |
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| Q |
201 |
tagcgtctgaagatgattttcagaccacgaatggctttgagactttttggaatgcaatagtaaaagtttgcctaataac |
279 |
Q |
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| T |
1374654 |
tagcgtctgaagatgattttcagaccacgaatggctttgagactttttggaatgcaatggtaaaagtttgcctaataac |
1374576 |
T |
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