View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6076_high_106 (Length: 279)

Name: NF6076_high_106
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6076_high_106
NF6076_high_106
[»] chr4 (54 HSPs)
chr4 (19-279)||(39049046-39049305)
chr4 (176-279)||(39113718-39113821)
chr4 (168-279)||(39533244-39533355)
chr4 (174-279)||(53184059-53184164)
chr4 (168-279)||(51392229-51392338)
chr4 (168-279)||(10089846-10089956)
chr4 (168-275)||(47750192-47750298)
chr4 (178-279)||(31848737-31848838)
chr4 (19-106)||(39054713-39054800)
chr4 (169-279)||(53348023-53348134)
chr4 (168-279)||(12158136-12158247)
chr4 (168-279)||(33526715-33526826)
chr4 (22-105)||(39236683-39236766)
chr4 (168-279)||(54356859-54356970)
chr4 (190-279)||(40596725-40596814)
chr4 (168-279)||(19409129-19409240)
chr4 (168-279)||(33523268-33523381)
chr4 (168-279)||(55408531-55408643)
chr4 (168-267)||(34564122-34564221)
chr4 (19-125)||(39292014-39292120)
chr4 (169-270)||(55888-55988)
chr4 (168-279)||(2215244-2215356)
chr4 (168-279)||(3533269-3533381)
chr4 (168-279)||(8991781-8991893)
chr4 (168-279)||(16020845-16020957)
chr4 (168-279)||(23540388-23540500)
chr4 (168-279)||(34199231-34199343)
chr4 (168-279)||(38173553-38173665)
chr4 (168-279)||(40721033-40721145)
chr4 (168-279)||(46917473-46917585)
chr4 (168-279)||(3618416-3618527)
chr4 (196-279)||(36656584-36656667)
chr4 (168-279)||(45081373-45081486)
chr4 (168-268)||(6290598-6290699)
chr4 (175-279)||(18469330-18469435)
chr4 (168-279)||(28899330-28899442)
chr4 (168-279)||(33604655-33604767)
chr4 (169-279)||(56054016-56054126)
chr4 (178-270)||(39418291-39418379)
chr4 (174-279)||(33077836-33077941)
chr4 (168-268)||(35809161-35809262)
chr4 (168-279)||(55560441-55560553)
chr4 (168-267)||(34463998-34464097)
chr4 (168-279)||(23389890-23390003)
chr4 (168-214)||(4981507-4981553)
chr4 (168-279)||(13094352-13094464)
chr4 (169-268)||(13110560-13110660)
chr4 (168-279)||(27863713-27863825)
chr4 (175-268)||(48403872-48403967)
chr4 (168-279)||(48506568-48506680)
chr4 (169-242)||(52017343-52017417)
chr4 (176-240)||(19272789-19272854)
chr4 (168-214)||(17329941-17329986)
chr4 (168-279)||(16174977-16175089)
[»] chr8 (42 HSPs)
chr8 (174-279)||(5212294-5212399)
chr8 (170-279)||(18029462-18029571)
chr8 (168-279)||(36912414-36912525)
chr8 (168-277)||(26749373-26749482)
chr8 (168-279)||(17741709-17741820)
chr8 (174-279)||(34955629-34955734)
chr8 (175-269)||(8609954-8610048)
chr8 (178-279)||(30470781-30470882)
chr8 (168-276)||(41477180-41477288)
chr8 (168-275)||(26632120-26632227)
chr8 (174-279)||(42860717-42860822)
chr8 (168-279)||(38584857-38584968)
chr8 (168-279)||(4625457-4625568)
chr8 (176-279)||(13814952-13815055)
chr8 (169-279)||(29637118-29637228)
chr8 (168-269)||(39811031-39811133)
chr8 (168-279)||(7990428-7990539)
chr8 (174-279)||(5735290-5735395)
chr8 (178-279)||(30289693-30289794)
chr8 (168-279)||(31129464-31129577)
chr8 (168-279)||(35099432-35099544)
chr8 (168-268)||(43525062-43525163)
chr8 (168-268)||(1958154-1958254)
chr8 (168-279)||(43524353-43524465)
chr8 (168-279)||(43618311-43618423)
chr8 (168-279)||(45100987-45101099)
chr8 (168-279)||(42859922-42860034)
chr8 (176-279)||(30532413-30532516)
chr8 (168-269)||(24431839-24431937)
chr8 (168-279)||(15053629-15053741)
chr8 (218-279)||(17494517-17494578)
chr8 (168-279)||(40283472-40283584)
chr8 (168-279)||(35931859-35931970)
chr8 (168-279)||(12272444-12272556)
chr8 (168-279)||(44149867-44149979)
chr8 (168-278)||(13947363-13947474)
chr8 (175-268)||(26244501-26244595)
chr8 (170-279)||(44503166-44503276)
chr8 (174-236)||(23353189-23353251)
chr8 (168-279)||(29731692-29731803)
chr8 (178-214)||(7511885-7511921)
chr8 (169-279)||(23549711-23549822)
[»] chr7 (35 HSPs)
chr7 (168-279)||(22737558-22737669)
chr7 (174-279)||(21654850-21654955)
chr7 (174-279)||(30630777-30630882)
chr7 (174-279)||(22191224-22191328)
chr7 (168-279)||(24793489-24793600)
chr7 (168-270)||(35193091-35193193)
chr7 (174-279)||(48984911-48985016)
chr7 (168-279)||(43571056-43571168)
chr7 (168-279)||(114488-114599)
chr7 (172-267)||(25038568-25038663)
chr7 (169-279)||(25218771-25218881)
chr7 (168-279)||(38970029-38970142)
chr7 (168-279)||(36518513-36518624)
chr7 (168-279)||(35029071-35029183)
chr7 (168-279)||(33078747-33078859)
chr7 (184-279)||(26013162-26013256)
chr7 (168-276)||(30566598-30566707)
chr7 (168-279)||(5813096-5813208)
chr7 (168-279)||(30720118-30720230)
chr7 (168-279)||(37887845-37887957)
chr7 (170-268)||(40302464-40302563)
chr7 (168-214)||(32130299-32130345)
chr7 (179-279)||(47159457-47159558)
chr7 (168-279)||(39769727-39769839)
chr7 (168-279)||(42881356-42881468)
chr7 (169-279)||(22656666-22656777)
chr7 (169-214)||(28318071-28318116)
chr7 (168-279)||(45549581-45549693)
chr7 (168-276)||(33508491-33508601)
chr7 (168-267)||(43202111-43202214)
chr7 (175-242)||(38351584-38351652)
chr7 (178-279)||(32748805-32748907)
chr7 (168-268)||(37951745-37951848)
chr7 (218-279)||(1940634-1940695)
chr7 (168-279)||(20354221-20354333)
[»] chr5 (43 HSPs)
chr5 (168-279)||(8176266-8176377)
chr5 (168-277)||(14278826-14278935)
chr5 (174-279)||(4577008-4577113)
chr5 (168-279)||(41152969-41153080)
chr5 (168-279)||(41263359-41263470)
chr5 (169-279)||(15972565-15972675)
chr5 (168-279)||(11954774-11954885)
chr5 (168-279)||(25032350-25032461)
chr5 (174-279)||(10569773-10569878)
chr5 (174-279)||(25652816-25652921)
chr5 (168-267)||(34529357-34529456)
chr5 (176-270)||(8681260-8681354)
chr5 (169-275)||(27407711-27407819)
chr5 (168-279)||(31013806-31013918)
chr5 (175-267)||(34918453-34918543)
chr5 (168-279)||(32976539-32976650)
chr5 (176-258)||(12912875-12912957)
chr5 (168-279)||(4938182-4938295)
chr5 (168-279)||(13479786-13479898)
chr5 (169-279)||(27407004-27407116)
chr5 (168-279)||(40888891-40889003)
chr5 (168-279)||(37882394-37882503)
chr5 (168-279)||(23089515-23089627)
chr5 (168-279)||(27942488-27942600)
chr5 (168-279)||(30648075-30648187)
chr5 (168-278)||(19241313-19241424)
chr5 (191-267)||(42608019-42608095)
chr5 (168-279)||(3454733-3454844)
chr5 (168-268)||(25670879-25670980)
chr5 (168-279)||(29618976-29619088)
chr5 (175-279)||(23649130-23649235)
chr5 (175-279)||(23809336-23809441)
chr5 (168-241)||(42807000-42807074)
chr5 (172-279)||(34709878-34709986)
chr5 (169-279)||(7651001-7651112)
chr5 (168-235)||(9274457-9274523)
chr5 (168-242)||(32363614-32363689)
chr5 (168-275)||(4219411-4219515)
chr5 (168-258)||(36609286-36609387)
chr5 (176-268)||(39238419-39238512)
chr5 (175-279)||(42317892-42317996)
chr5 (169-242)||(31008384-31008458)
chr5 (168-241)||(39008477-39008551)
[»] chr2 (36 HSPs)
chr2 (168-279)||(37245500-37245611)
chr2 (168-279)||(927855-927966)
chr2 (174-277)||(9074190-9074293)
chr2 (168-279)||(39433975-39434086)
chr2 (175-279)||(1987125-1987229)
chr2 (168-279)||(5146674-5146786)
chr2 (168-279)||(31192947-31193058)
chr2 (168-279)||(38901719-38901830)
chr2 (168-279)||(14152029-14152142)
chr2 (169-279)||(36855737-36855846)
chr2 (168-279)||(12855018-12855130)
chr2 (168-279)||(13151446-13151559)
chr2 (168-279)||(24997079-24997191)
chr2 (168-279)||(30822546-30822658)
chr2 (168-279)||(39490142-39490253)
chr2 (174-276)||(31174152-31174253)
chr2 (168-279)||(4296734-4296846)
chr2 (168-279)||(6362953-6363065)
chr2 (168-279)||(22351577-22351689)
chr2 (168-279)||(43021740-43021852)
chr2 (168-279)||(7588465-7588579)
chr2 (168-279)||(8852056-8852168)
chr2 (218-279)||(43495680-43495741)
chr2 (174-266)||(2780713-2780805)
chr2 (168-279)||(1073046-1073158)
chr2 (168-267)||(17485816-17485916)
chr2 (168-279)||(36209438-36209549)
chr2 (168-279)||(9117811-9117923)
chr2 (169-268)||(36526821-36526921)
chr2 (169-279)||(44279992-44280103)
chr2 (229-275)||(6333356-6333402)
chr2 (168-240)||(7763489-7763562)
chr2 (168-279)||(14382966-14383078)
chr2 (168-214)||(1308726-1308772)
chr2 (168-214)||(17929284-17929330)
chr2 (218-278)||(16218829-16218889)
[»] chr1 (42 HSPs)
chr1 (168-279)||(17783372-17783483)
chr1 (174-279)||(44451233-44451338)
chr1 (174-279)||(44651074-44651179)
chr1 (168-279)||(44929253-44929364)
chr1 (168-279)||(8464094-8464205)
chr1 (174-279)||(643785-643890)
chr1 (168-279)||(41542325-41542434)
chr1 (168-269)||(44334284-44334385)
chr1 (177-277)||(52933733-52933833)
chr1 (177-277)||(52941368-52941468)
chr1 (168-279)||(20584814-20584925)
chr1 (168-279)||(31468128-31468240)
chr1 (168-279)||(45239133-45239245)
chr1 (168-279)||(45456113-45456225)
chr1 (168-279)||(51494434-51494546)
chr1 (168-279)||(48404325-48404437)
chr1 (168-278)||(29523698-29523809)
chr1 (169-279)||(37646522-37646633)
chr1 (174-279)||(3754986-3755096)
chr1 (168-279)||(8468319-8468431)
chr1 (168-279)||(48388070-48388182)
chr1 (168-279)||(2478291-2478402)
chr1 (198-270)||(48729347-48729419)
chr1 (168-275)||(36302977-36303084)
chr1 (168-279)||(23092764-23092876)
chr1 (168-279)||(27630422-27630534)
chr1 (168-279)||(37420306-37420418)
chr1 (169-279)||(33164408-33164519)
chr1 (169-269)||(40500396-40500495)
chr1 (168-242)||(30878543-30878618)
chr1 (169-279)||(37822565-37822677)
chr1 (176-279)||(31159390-31159494)
chr1 (168-268)||(19578882-19578984)
chr1 (168-277)||(36230352-36230462)
chr1 (175-268)||(37691263-37691357)
chr1 (168-268)||(14096686-14096787)
chr1 (176-279)||(29919373-29919478)
chr1 (168-242)||(35847120-35847195)
chr1 (168-240)||(39149071-39149143)
chr1 (178-279)||(47300459-47300561)
chr1 (177-258)||(51520221-51520303)
chr1 (176-240)||(45623531-45623596)
[»] chr3 (63 HSPs)
chr3 (174-279)||(42601468-42601573)
chr3 (175-279)||(41890540-41890644)
chr3 (168-279)||(37410382-37410493)
chr3 (168-275)||(42601760-42601867)
chr3 (168-279)||(46572888-46572999)
chr3 (176-279)||(49147251-49147354)
chr3 (174-279)||(49823133-49823238)
chr3 (168-279)||(15493785-15493894)
chr3 (168-279)||(25450597-25450708)
chr3 (168-279)||(50033666-50033777)
chr3 (174-279)||(25832687-25832792)
chr3 (174-279)||(49357460-49357565)
chr3 (174-279)||(51427105-51427210)
chr3 (168-279)||(28410393-28410505)
chr3 (174-279)||(33934996-33935100)
chr3 (168-279)||(43022647-43022759)
chr3 (168-279)||(33748684-33748795)
chr3 (168-279)||(35853154-35853266)
chr3 (168-279)||(49710351-49710463)
chr3 (168-279)||(35423972-35424083)
chr3 (168-279)||(138974-139087)
chr3 (168-279)||(33795458-33795566)
chr3 (168-279)||(49407300-49407411)
chr3 (174-279)||(50017058-50017157)
chr3 (172-279)||(20139363-20139472)
chr3 (168-279)||(25790737-25790849)
chr3 (168-279)||(30418392-30418503)
chr3 (168-278)||(42258316-42258437)
chr3 (168-279)||(6048658-6048770)
chr3 (168-279)||(12974667-12974780)
chr3 (168-279)||(17466514-17466626)
chr3 (168-279)||(47144172-47144284)
chr3 (168-279)||(47701025-47701137)
chr3 (168-268)||(29701681-29701782)
chr3 (201-279)||(30862760-30862838)
chr3 (168-279)||(5845102-5845214)
chr3 (168-279)||(6832383-6832495)
chr3 (168-279)||(10426393-10426505)
chr3 (168-279)||(32120400-32120512)
chr3 (168-279)||(41183273-41183385)
chr3 (168-279)||(42560900-42561012)
chr3 (168-279)||(50415792-50415904)
chr3 (168-279)||(7521100-7521211)
chr3 (168-268)||(44084308-44084409)
chr3 (168-279)||(11908018-11908130)
chr3 (168-279)||(27847408-27847520)
chr3 (168-279)||(36178666-36178778)
chr3 (168-240)||(51999238-51999311)
chr3 (168-242)||(43473889-43473964)
chr3 (210-269)||(44995259-44995318)
chr3 (178-265)||(50176062-50176149)
chr3 (168-268)||(46123925-46124026)
chr3 (168-279)||(4045979-4046091)
chr3 (168-279)||(26165516-26165628)
chr3 (176-279)||(38572116-38572220)
chr3 (178-241)||(52000062-52000126)
chr3 (168-279)||(55026738-55026850)
chr3 (168-212)||(49028573-49028617)
chr3 (217-269)||(53722440-53722492)
chr3 (168-234)||(37183844-37183911)
chr3 (168-214)||(7008054-7008100)
chr3 (168-214)||(35472654-35472700)
chr3 (168-279)||(48886948-48887055)
[»] chr6 (19 HSPs)
chr6 (174-279)||(6380452-6380557)
chr6 (168-279)||(29428481-29428592)
chr6 (168-279)||(24348430-24348542)
chr6 (168-279)||(6725587-6725699)
chr6 (168-279)||(22627833-22627945)
chr6 (168-279)||(32359743-32359854)
chr6 (168-279)||(631515-631627)
chr6 (168-279)||(30446241-30446353)
chr6 (168-279)||(34838578-34838689)
chr6 (168-268)||(8660556-8660657)
chr6 (171-279)||(12501832-12501941)
chr6 (168-279)||(34328278-34328390)
chr6 (169-279)||(12512911-12513022)
chr6 (168-279)||(197801-197913)
chr6 (168-267)||(10883869-10883969)
chr6 (168-279)||(17961226-17961338)
chr6 (168-279)||(8669887-8669998)
chr6 (190-279)||(8218964-8219054)
chr6 (229-279)||(25834618-25834668)
[»] scaffold0100 (1 HSPs)
scaffold0100 (168-279)||(30501-30612)
[»] scaffold0012 (1 HSPs)
scaffold0012 (168-276)||(124013-124119)
[»] scaffold0054 (1 HSPs)
scaffold0054 (168-278)||(57706-57817)
[»] scaffold0016 (1 HSPs)
scaffold0016 (169-279)||(66034-66145)
[»] scaffold0362 (1 HSPs)
scaffold0362 (168-242)||(5322-5397)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 39049305 - 39049046
Alignment:
Q  19 tagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataatttttctgtttt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39049305 tagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataatttttctgtttt 39049206  T
Q  119 acaacattgatc-gtttatattagaccatctacaatgggnnnnnnnnnnncaacacccacttttttaattcccaacattccacatcattttctctctttt 217  Q
    |||||||||||| |||||||||||||||||||||||  |           ||||| |||||||||||||| |||||| ||||||||||||||||| | ||    
T  39049205 acaacattgatctgtttatattagaccatctacaat--gattttttctttcaacatccacttttttaatttccaacactccacatcattttctctttctt 39049108  T
Q  218 attcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||    
T  39049107 attcaacattcattcaacttttaccctctccgatggtttttcattcaacactctaccccacc 39049046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 39113821 - 39113718
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccc 275  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||| ||||    
T  39113821 actttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaacttttaccattttcaatggtttttcattcaacactctaccc 39113722  T
Q  276 cacc 279  Q
    ||||    
T  39113721 cacc 39113718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 39533355 - 39533244
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| |||| |||| ||||||| ||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  39533355 caacacccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttaccatctacaatgatttttcattcaaca 39533256  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  39533255 ctctaccccacc 39533244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 53184164 - 53184059
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||| ||    
T  53184164 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctccaatggtttttcattcaacactctac 53184065  T
Q  274 cccacc 279  Q
    ||||||    
T  53184064 cccacc 53184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 51392229 - 51392338
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||||||||| ||||| ||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  51392229 caacacacacttttttaattctcaacactccacatcattttttctctt--attcaacattcgttcaacttttaccctcttcaatggtttttcattcaaca 51392326  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  51392327 ctttaccccacc 51392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 10089846 - 10089956
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||  ||| | ||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  10089846 caacacccactttttcaattttcaatactccacatcatttt-tctctcttattcaacactcattcaacttttaccctctccaatgatttttcattcaaca 10089944  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  10089945 ctctaccccacc 10089956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 47750298 - 47750192
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| |||||||| || ||||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  47750298 caacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactcattcaacttttaccctctccaatgatttttcattcaaca 47750200  T
Q  268 ctcaaccc 275  Q
    ||| ||||    
T  47750199 ctctaccc 47750192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 31848838 - 31848737
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacccca 277  Q
    ||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||| ||||||    
T  31848838 tttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatggtttttcattcaacactctacccca 31848739  T
Q  278 cc 279  Q
    ||    
T  31848738 cc 31848737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 39054800 - 39054713
Alignment:
Q  19 tagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataa 106  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  39054800 tagacaccaatttccattgtgttctttgcattgatgagcttaatcaacatccttataagttgtccttcatcagcaggtgtggccataa 39054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 53348134 - 53348023
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||| ||||||||| ||||  ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaatgatttttcattcaaca 53348035  T
Q  268 ctcaaccccacc 279  Q
    | | ||||||||    
T  53348034 ccctaccccacc 53348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 12158136 - 12158247
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| |||| ||||  |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| | | ||||||| ||||||||||||||    
T  12158136 caacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaacttttatctttttcaatggtttttcattcaaca 12158235  T
Q  268 ctcaaccccacc 279  Q
    ||| ||| ||||    
T  12158236 ctctacctcacc 12158247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 33526715 - 33526826
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||| ||||| |||  |||||||||| |||||||||||| | |||||||||||||||||||| |||| |||||||||||||||    
T  33526715 caacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctccaataatttttcattcaaca 33526814  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  33526815 ctttaccccacc 33526826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 39236766 - 39236683
Alignment:
Q  22 acaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccata 105  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  39236766 acaccaatttctaacgtgttctttgcattgataagcttaaccaacatgcttataagttgtccttcatcaccgggtatagccata 39236683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 54356970 - 54356859
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||  |||||||||||||| ||||  |||| ||||||||||||||    
T  54356970 caacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctctctaatggtttttcattcaaca 54356871  T
Q  268 ctcaaccccacc 279  Q
    ||| ||| ||||    
T  54356870 ctctacctcacc 54356859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 40596814 - 40596725
Alignment:
Q  190 caacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    ||||| ||||| |||||||||||||||||||||||| | ||||||||||||| |||| ||||| ||||||||||||||||| ||||||||    
T  40596814 caacactccacgtcattttctctcttttattcaacacttattcaacttttactctctccaatggtttttcattcaacactctaccccacc 40596725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 19409129 - 19409240
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| |||| |||| | || |||| ||||||||||| |||||||| |||||||||||||||| | ||| ||||| ||||||||||||||    
T  19409129 caacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattcattcaacttttatcatctccaatggtttttcattcaaca 19409228  T
Q  268 ctcaaccccacc 279  Q
    |||  |||||||    
T  19409229 ctcttccccacc 19409240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 33523268 - 33523381
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||   |||| |||||| ||||| ||||||    
T  33523268 caacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatccattcaattttttatctctccaatgatttttttattcaa 33523367  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  33523368 cactctaccccacc 33523381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 55408643 - 55408531
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||| ||||||||   |||||| || ||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||| | |||||||||||||    
T  55408643 caacactcactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatagttttttcattcaac 55408544  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  55408543 actctaccccacc 55408531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 34564122 - 34564221
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||| ||||||||||| ||||| |  | || ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  34564122 caacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctcttcaatggttttttattcaaca 34564221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 39292014 - 39292120
Alignment:
Q  19 tagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataatttttctgtttt 118  Q
    ||||||||||||||||  ||||||||||||||||||||||| || | |||| | ||||| || ||||||||| ||||||||||||| || |  |||||||    
T  39292014 tagacaccaatttccattgtgttctttgcattgatgagcttaattagcatgttgataagctggccttcatcaccgggtgtagccatcatatacctgtttt 39292113  T
Q  119 acaacat 125  Q
    |||||||    
T  39292114 acaacat 39292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 55988 - 55888
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    ||||| |||||||| |||| |||||| ||| ||||||||||| ||| ||||||||| |||||| |||||||| | ||||||||| |||||||||||||||    
T  55988 aacactcactttttcaatttccaacactccgcatcattttctttctcttattcaactttcatt-aacttttatcatcttcaatggtttttcattcaacac 55890  T
Q  269 tc 270  Q
    ||    
T  55889 tc 55888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 2215356 - 2215244
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  2215356 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 2215258  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  2215257 caccctaccccacc 2215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 3533381 - 3533269
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  3533381 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 3533283  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  3533282 caccctaccccacc 3533269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8991781 - 8991893
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  8991781 caacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 8991879  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  8991880 caccctaccccacc 8991893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 16020845 - 16020957
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || ||||||||| ||||||| ||||| ||||| |||| | ||||||||||||    
T  16020845 caacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaattttta-cctctccaatggttttttcattcaa 16020943  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  16020944 caccctaccccacc 16020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 23540500 - 23540388
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| || |||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||||| ||||||||||||    
T  23540500 caacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaa 23540402  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  23540401 cactctaccccacc 23540388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 34199343 - 34199231
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||||| ||||||||||||    
T  34199343 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaa 34199245  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  34199244 caccctaccccacc 34199231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 38173553 - 38173665
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||| ||| ||||| ||||| |||| | ||||||||||||    
T  38173553 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatccaattttta-cctctccaatggttttttcattcaa 38173651  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  38173652 caccctaccccacc 38173665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 40721033 - 40721145
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  40721033 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 40721131  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  40721132 caccctaccccacc 40721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 46917585 - 46917473
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  46917585 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 46917487  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  46917486 caccctaccccacc 46917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 3618527 - 3618416
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| ||||| ||||| |||||||    
T  3618527 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatggttttttattcaac 3618429  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  3618428 accctaccccacc 3618416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 36656584 - 36656667
Alignment:
Q  196 tccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    ||||||||||||||||||| ||| |||| | ||||||||||||||| |||| | ||||||||||||||||||||| || |||||    
T  36656584 tccacatcattttctctctcttaatcaatactcattcaacttttacactctccgatgatttttcattcaacactctactccacc 36656667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 45081486 - 45081373
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatg--atttttcattca 264  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| ||||| ||||| |||||   |||||||||||    
T  45081486 caacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta-cctctccaatggtttttttcattca 45081388  T
Q  265 acactcaaccccacc 279  Q
    |||| | ||||||||    
T  45081387 acaccctaccccacc 45081373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 6290598 - 6290699
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  6290598 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 6290696  T
Q  266 cac 268  Q
    |||    
T  6290697 cac 6290699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 18469435 - 18469330
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttct-ctctttta-ttcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaa 272  Q
    |||||||| ||||||||||| ||||||||||||| | |||| ||| |||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||| |    
T  18469435 cactttttcaattcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacc-tctccaatggtttttcattcaacactcta 18469337  T
Q  273 ccccacc 279  Q
    |||||||    
T  18469336 ccccacc 18469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 28899330 - 28899442
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||| || ||||||||  ||||||| ||||| |||||  ||| | ||||||||||||    
T  28899330 caacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacacccattcaattttta-cctctctaatggttttttcattcaa 28899428  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  28899429 cactctaccccacc 28899442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 33604655 - 33604767
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  33604655 caacacccactttttcaattcccaacactccacatcattttctctatcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 33604753  T
Q  266 cactcaaccccacc 279  Q
    | ||| | ||||||    
T  33604754 ctctctatcccacc 33604767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 56054016 - 56054126
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| || |||| |||  ||||||| ||||  ||||| |||||| |||||||||||||    
T  56054016 aacatccactttttcaattcccaacactccacatcattttctctctcttaattctacacccattcaattttt--cctctccaatgattttttcattcaac 56054113  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  56054114 actctaccccacc 56054126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 39418379 - 39418291
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactc 270  Q
    ||||| ||||| |||||||||||||    |||||||||||||| |||||| |||||| |||||| |||||||||  |||||||||||||||||    
T  39418379 tttttcaattctcaacattccacat----ttctctcttttatttaacatttattcaatttttactctcttcaatagtttttcattcaacactc 39418291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 33077941 - 33077836
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaa 272  Q
    ||||||||| |||| |||||| ||||||||||||||||||||| ||| ||||  ||||||| ||||| ||||| |||| | ||||||||||||||| | |    
T  33077941 ccactttttcaatttccaacactccacatcattttctctctttaatttaacacccattcaattttta-cctctccaatggttttttcattcaacacccta 33077843  T
Q  273 ccccacc 279  Q
    |||||||    
T  33077842 ccccacc 33077836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 35809161 - 35809262
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  35809161 caacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaattttta-cctctccaatagttttttcattcaa 35809259  T
Q  266 cac 268  Q
    |||    
T  35809260 cac 35809262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 55560553 - 55560441
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||   |||||| ||||| ||||| |||| | ||||||||||||    
T  55560553 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacctattcaattttta-cctctccaatggttttttcattcaa 55560455  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  55560454 caccctaccccacc 55560441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 34464097 - 34463998
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||| || ||||||||  | ||||| ||||| ||||| ||||  |||||||||||||    
T  34464097 caacaccaacttttttaatttccaacatttcacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagtttttcattcaac 34463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 23390003 - 23389890
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatg--atttttcattca 264  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||||  | |||||| | |||||||| | ||| ||||| |||||   |||||||||||    
T  23390003 caacactcactttttcaattcccaacactccacattattttctctctcataattcaatactcattcaattgtta-cctctccaatggtttttttcattca 23389905  T
Q  265 acactcaaccccacc 279  Q
    |||||||||||||||    
T  23389904 acactcaaccccacc 23389890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 4981507 - 4981553
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  4981507 caacacccactttttcaattcccaacactccacatcattttctctct 4981553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 13094464 - 13094352
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| |||||  |||| |||| | ||||||||||||    
T  13094464 caacacccattttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaattttta-tctctccaatagttttttcattcaa 13094366  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  13094365 caccctaccccacc 13094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 13110560 - 13110660
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||| ||||||||||| |||||| |||||| ||||| || ||||||||  ||||||| ||||| ||||| |||| | |||||||||||||    
T  13110560 aacacccactttttcaattcccaacactccacaacattttttctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaac 13110658  T
Q  267 ac 268  Q
    ||    
T  13110659 ac 13110660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 27863713 - 27863825
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatgatttt-tcattcaa 265  Q
    ||||||| | ||||| ||||| ||||| ||||| ||||||||||| || || |||||||| ||||||| ||||||| ||| |||| ||||| ||||||||    
T  27863713 caacacctattttttcaattctcaacactccacgtcattttctctgttataattcaacatccattcaatttttacc-tctccaataattttttcattcaa 27863811  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  27863812 cactctaccccacc 27863825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 48403967 - 48403872
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgattttt--cattcaacac 268  Q
    |||||||| |||| |||||| |||||||||||||||||||  | |||||||| |||||||| ||||| ||||| |||||||||||  ||||||||||    
T  48403967 cactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgattttttccattcaacac 48403872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 48506680 - 48506568
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||  ||||| ||||||||||||||||||| || |||||||| |||||||| |||||  |||| |||| | |||||||| |||    
T  48506680 caacatccactttttcaattttcaacactccacatcattttctctctcttaattcaacactcattcaattttta-actctccaatggttttttcatgcaa 48506582  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  48506581 cactctaccccacc 48506568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 52017343 - 52017417
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    |||||| ||||||| |||||| |||| || |||||||||||||||| || |||||||| |||||||| |||||||    
T  52017343 aacacctactttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattcaatttttacc 52017417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 19272789 - 19272854
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 240  Q
    ||||||| ||||||||||| |||||||||||||||||||  | ||||||||| ||||||| |||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 19272854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 17329986 - 17329941
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  17329986 caacatccactttttcaattcc-aacattccacatcattttctctct 17329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 16175089 - 16174977
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||| ||||| ||||  ||||| |||||||||||||||| || || ||||||||  | ||||| ||||| ||||| |||| | ||||||||||||    
T  16175089 caacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacaccctttcaattttta-cctctccaatagttttttcattcaa 16174991  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  16174990 caccctaccccacc 16174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 5212294 - 5212399
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||    
T  5212294 ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgatttttcattcaacactctac 5212393  T
Q  274 cccacc 279  Q
    ||||||    
T  5212394 cccacc 5212399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 18029571 - 18029462
Alignment:
Q  170 acacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacact 269  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  18029571 acacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacact 18029472  T
Q  270 caaccccacc 279  Q
    | ||||||||    
T  18029471 ctaccccacc 18029462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 36912414 - 36912525
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  36912414 caacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaaca 36912513  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  36912514 ctctaccccacc 36912525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 26749482 - 26749373
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26749482 caacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctcttcaatggtttttcattcaaca 26749383  T
Q  268 ctcaacccca 277  Q
     || ||||||    
T  26749382 ttctacccca 26749373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 17741709 - 17741820
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  17741709 caacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatgatttttcattcaaca 17741808  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  17741809 ctctaccccacc 17741820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 34955734 - 34955629
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||| || ||    
T  34955734 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacattctac 34955635  T
Q  274 cccacc 279  Q
    ||||||    
T  34955634 cccacc 34955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 8610048 - 8609954
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacact 269  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  8610048 cactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctccaatggtttttcattcaacact 8609954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 30470882 - 30470781
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacccca 277  Q
    ||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  30470882 tttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttactctcttcaatggtttttcattcaacactctacccca 30470783  T
Q  278 cc 279  Q
    ||    
T  30470782 cc 30470781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 41477180 - 41477288
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  41477180 caacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttaccatctccaatggtttttcattcaaca 41477279  T
Q  268 ctcaacccc 276  Q
    ||| |||||    
T  41477280 ctctacccc 41477288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 26632227 - 26632120
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  26632227 caacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactcattcaacttttactctctccaatggtttttcattcaaca 26632128  T
Q  268 ctcaaccc 275  Q
    ||| ||||    
T  26632127 ctctaccc 26632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 42860717 - 42860822
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||||||| ||||||||| |||| ||||| ||||| ||||||||||||||||| ||    
T  42860717 ccactttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacatttaacctctccaatggtttttcattcaacactccac 42860816  T
Q  274 cccacc 279  Q
    ||||||    
T  42860817 cccacc 42860822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 38584968 - 38584857
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||| ||||||||||| ||||| ||||||||||||| |||||||||| || |||||||||||||| || ||||| ||||||||||||||    
T  38584968 caacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttacccactccaatggtttttcattcaaca 38584869  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  38584868 ctttaccccacc 38584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 4625568 - 4625457
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||| ||||||||||| |||| || ||||||||||| |||||||||| |||||||||||||| | ||| ||||| ||||||||||||||    
T  4625568 caacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaacttttatcatctccaatggtttttcattcaaca 4625469  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  4625468 ctataccccacc 4625457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 13814952 - 13815055
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccc 275  Q
    ||||||| |||| |||||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||| |||||||||||||| || ||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctccaatggtttttcattcaacattctaccc 13815051  T
Q  276 cacc 279  Q
    ||||    
T  13815052 cacc 13815055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 29637228 - 29637118
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    |||| ||| ||||| |||| |||||| ||||||| ||||||||| | ||||| |||| |||||||||||||||||||||||||  |||||||||||||||    
T  29637228 aacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaacttttaccctcttcaatagtttttcattcaacac 29637129  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  29637128 tctaccccacc 29637118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 39811133 - 39811031
Alignment:
Q  168 caacacccactttttt-aattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    |||||||||||||||| |||||| | || ||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||  |||||||||||||    
T  39811133 caacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctccaatagtttttcattcaac 39811034  T
Q  267 act 269  Q
    |||    
T  39811033 act 39811031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 7990428 - 7990539
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||| ||||||||  ||||| ||||| | ||||| | ||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  7990428 caacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaaca 7990527  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  7990528 ctttaccccacc 7990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 5735290 - 5735395
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||  ||| | || |||||||||||||||| |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| | ||    
T  5735290 ccactttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctccaatggtttttcattcaacaccctac 5735389  T
Q  274 cccacc 279  Q
    ||||||    
T  5735390 cccacc 5735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 30289794 - 30289693
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacccca 277  Q
    ||||| ||||| ||||| || |||||||||||||||| |||||||| |  ||||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  30289794 tttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctccaattgtttttcattcaacactctacccca 30289695  T
Q  278 cc 279  Q
    ||    
T  30289694 cc 30289693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 31129577 - 31129464
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||||| || |||| ||| |||||||||||||||| |||  ||||| ||||||||||||    
T  31129577 caacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttaccatctctaatgattttttcattcaa 31129478  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  31129477 cactctaccccacc 31129464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 35099432 - 35099544
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||| || |||||||| |||||||| ||||| ||||| |||||| ||||||||||||    
T  35099432 caacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatgattttttcattcaa 35099530  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  35099531 caccctaccccacc 35099544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 43525163 - 43525062
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  43525163 caacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 43525065  T
Q  266 cac 268  Q
    |||    
T  43525064 cac 43525062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 1958254 - 1958154
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| ||||| |||||||    
T  1958254 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttattcaac 1958156  T
Q  267 ac 268  Q
    ||    
T  1958155 ac 1958154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 43524465 - 43524353
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| ||||| ||||| |||||| ||||||||||||    
T  43524465 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgattttttcattcaa 43524367  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  43524366 caccctaccccacc 43524353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 43618423 - 43618311
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||| ||||| |||| | ||||||||||||    
T  43618423 caacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaattttta-cctctccaatggttttttcattcaa 43618325  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  43618324 caccctaccccacc 43618311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 45101099 - 45100987
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  45101099 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 45101001  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  45101000 caccctaccccacc 45100987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 42859922 - 42860034
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  42859922 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-catctccaatggttttttcattcaa 42860020  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  42860021 caccctaccccacc 42860034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 30532516 - 30532413
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacc 274  Q
    ||||||| |||||| |||| |||  |||||||||||||| |||||||||||||||||||||||| |  |||  ||||||||||||||||||||| | |||    
T  30532516 actttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaacttt-atactcaccaatgatttttcattcaacaccctacc 30532418  T
Q  275 ccacc 279  Q
    |||||    
T  30532417 ccacc 30532413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 24431937 - 24431839
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||  ||||| |||| |||| ||||||||||  |||||| | | |||||||||||||||||| ||||||||||||||||||||    
T  24431937 caacatccactttttcaattttcaacactccaaatcactttctctctt--attcaatact-attcaacttttaccctctccaatgatttttcattcaaca 24431841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 15053629 - 15053741
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||| || ||||||||  ||||||| ||||| || || |||| | ||||||||||||    
T  15053629 caacacccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacccattcaattttta-ccactccaatggttttttcattcaa 15053727  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  15053728 caccctaccccacc 15053741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 17494578 - 17494517
Alignment:
Q  218 attcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  17494578 attcaacaatcattgaacttttaccctctccaatggtttttcattcaacactctaccccacc 17494517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 40283472 - 40283584
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  40283472 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaattttta-cctctccaatagttttttcattcaa 40283570  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  40283571 caccctaccccacc 40283584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 35931859 - 35931970
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| ||||  |||||||||||||    
T  35931859 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagtttttcattcaac 35931957  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  35931958 accctaccccacc 35931970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 12272556 - 12272444
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||  ||||| ||||| ||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  12272556 caacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 12272458  T
Q  266 cactcaaccccacc 279  Q
    || || ||||||||    
T  12272457 cattctaccccacc 12272444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 44149867 - 44149979
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |  | |||||| |  ||||||| ||||| ||||| |||| | ||||||||||||    
T  44149867 caacactcacttttttaatttccaacattccacatcattttctctttcataattcaatacccattcaattttta-cctctccaatggttttttcattcaa 44149965  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  44149966 caccctaccccacc 44149979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 13947363 - 13947474
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||| |||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  13947363 caacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaattttta-cctctccaatggttttttcattcaa 13947461  T
Q  266 cactcaaccccac 278  Q
    ||| | |||||||    
T  13947462 cacactaccccac 13947474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 26244501 - 26244595
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacac 268  Q
    |||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | |||||||||||||||    
T  26244501 cactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaattttta-cctctccaatagttttttcattcaacac 26244595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 44503166 - 44503276
Alignment:
Q  170 acacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaaca 267  Q
    |||| |||||||| ||||||||||| ||||| ||||||||||||| || ||| ||||  ||||||| |||||  ||||||||| | ||||||||||||||    
T  44503166 acacacactttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaattttta-tctcttcaatggttttttcattcaaca 44503264  T
Q  268 ctcaaccccacc 279  Q
    | | ||||||||    
T  44503265 ccctaccccacc 44503276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 23353251 - 23353189
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaact 236  Q
    ||||||||| |||| |||||| ||||||||  ||||||||| ||||| |||||||||||||||    
T  23353251 ccactttttcaatttccaacactccacatccctttctctctcttatttaacattcattcaact 23353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 29731692 - 29731803
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||| ||||||| |||||  || |||||||  ||||||| ||||| | ||| |||| | ||||||||||||    
T  29731692 caacacccactttttcaattcccaacactccacgtcatttt-tctctcataattcaacacccattcaatttttaac-tctccaatagttttttcattcaa 29731789  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  29731790 caccctaccccacc 29731803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 7511921 - 7511885
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctct 214  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7511921 ttttttaatttccaacactccacatcattttctctct 7511885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 23549711 - 23549822
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||| | ||||| ||||||||||| ||||||  |||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | |||||||||||||    
T  23549711 aacacctattttttcaattcccaacactccacactattttctctctcataattcaacacccattcaattttta-cctctccaatggttttttcattcaac 23549809  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  23549810 accctaccccacc 23549822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 22737669 - 22737558
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  22737669 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccttctccaatggtttttcattcaaca 22737570  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  22737569 ctctaccccacc 22737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 21654850 - 21654955
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||| ||    
T  21654850 ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatggtttttcattcaacactctac 21654949  T
Q  274 cccacc 279  Q
    ||||||    
T  21654950 cccacc 21654955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 30630882 - 30630777
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||| ||    
T  30630882 ccacttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctctccaatggtttttcattcaacactctac 30630783  T
Q  274 cccacc 279  Q
    ||||||    
T  30630782 cccacc 30630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 22191224 - 22191328
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||  |||||||||||||||| ||    
T  22191224 ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatg-gttttcattcaacactctac 22191322  T
Q  274 cccacc 279  Q
    ||||||    
T  22191323 cccacc 22191328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 24793489 - 24793600
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||| |||||| || |||||||| |||| |||||||||||| | |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  24793489 caacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttacactctccaatggtttttcattcaaca 24793588  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  24793589 ctctaccccacc 24793600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 35193193 - 35193091
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||| ||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  35193193 caacactcactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttaccatctccaatggtttttcattcaaca 35193094  T
Q  268 ctc 270  Q
    |||    
T  35193093 ctc 35193091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 48984911 - 48985016
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| |||| |||||  ||||||||||||||||||| |||||||||| ||||||||| |||||| ||| ||||| ||||||||||||||||| ||    
T  48984911 ccactttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttaccatctccaatggtttttcattcaacactctac 48985010  T
Q  274 cccacc 279  Q
    ||||||    
T  48985011 cccacc 48985016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 43571168 - 43571056
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||| | |||||||||||||    
T  43571168 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaac 43571069  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  43571068 actctaccccacc 43571056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 114488 - 114599
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| ||||| |||||||| | ||| ||||| |||||||||||| |    
T  114488 caacacccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaacttttatcatctccaatggtttttcattcaata 114587  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  114588 ctttaccccacc 114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 25038663 - 25038568
Alignment:
Q  172 acccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||||||||||||||| || | ||||||||||||||||| |||||| ||| |||||||| ||||||||||| ||||| ||||||||||||||    
T  25038663 acccacttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctctccaatggtttttcattcaaca 25038568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 25218881 - 25218771
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    |||| ||||||||| |||| |||||| | || |||||||||||||| |||||||| | ||||| |||||||||||||| ||||| |||||||||||||||    
T  25218881 aacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctccaatggtttttcattcaacac 25218782  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  25218781 tctaccccacc 25218771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 38970029 - 38970142
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctct--cttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| ||||||||||||| | |  || |||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  38970029 caacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttaccgtctccaatgatttttcattcaa 38970128  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  38970129 caccctaccccacc 38970142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 36518513 - 36518624
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| ||||| ||||| |||||||    
T  36518513 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttattcaac 36518611  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  36518612 accctaccccacc 36518624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 35029183 - 35029071
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  35029183 caacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 35029085  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  35029084 caccctaccccacc 35029071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 33078859 - 33078747
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||| | ||||||||||| || ||||||||||||||||| ||||| ||||| |||| | ||||||||||||    
T  33078859 caacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattcattcaattttta-cctctccaatagttttttcattcaa 33078761  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  33078760 cactctaccccacc 33078747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 26013256 - 26013162
Alignment:
Q  184 aattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||| |||||| |||| |||||||||||||| || ||||| | ||||||||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  26013256 aatttccaacactccatatcattttctctctctt-ttcaatactcattcaacttttactctctccaatgatttttcattcaacactttaccccacc 26013162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 30566598 - 30566707
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || |||||||| |||||||| |||||  |||| |||| | ||||||||||||    
T  30566598 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaattttta-tctctccaatagttttttcattcaa 30566696  T
Q  266 cactcaacccc 276  Q
    ||||| |||||    
T  30566697 cactctacccc 30566707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 5813096 - 5813208
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||| || |||||||| | |||||| ||||| ||||| |||| | ||||||||||||    
T  5813096 caacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaattttta-cctctccaatggttttttcattcaa 5813194  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  5813195 caccctaccccacc 5813208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 30720118 - 30720230
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||| ||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| |||||||||| | ||||||||||||    
T  30720118 caacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctcttcaatggttttttcattcaa 30720216  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  30720217 caccctaccccacc 30720230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 37887845 - 37887957
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||||| || ||||||||| |||| || ||||| |||||||||| | ||||||||||||    
T  37887845 caacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccatttaattttta-cctcttcaatagttttttcattcaa 37887943  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  37887944 cactctaccccacc 37887957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 40302563 - 40302464
Alignment:
Q  170 acacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaaca 267  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||||    
T  40302563 acacccattttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaaca 40302465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 32130345 - 32130299
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctct 32130299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 47159558 - 47159457
Alignment:
Q  179 tttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaacccc 276  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||||| | |||||    
T  47159558 tttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaacaccctacccc 47159460  T
Q  277 acc 279  Q
    |||    
T  47159459 acc 47159457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 39769727 - 39769839
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||  | |||||||| |||||||| ||||| |||||  ||| | ||||||||||||    
T  39769727 caacacccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaattttta-cctctctaatggttttttcattcaa 39769825  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  39769826 caccctaccccacc 39769839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 42881356 - 42881468
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||   |||||| ||||| ||||| |||| | ||||||||||||    
T  42881356 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccaattcaattttta-cctctccaatggttttttcattcaa 42881454  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  42881455 caccctaccccacc 42881468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 22656666 - 22656777
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||| ||| |||||||||||| ||||  ||||||||||||||||||||| ||||||||| |||| || ||||| |||||||||| | ||||| |||||||    
T  22656666 aacatccatttttttaattcctaacacgccacatcattttctctcttttaattcaacatccatttaattttta-cctcttcaatggtttttttattcaac 22656764  T
Q  267 actcaaccccacc 279  Q
    |||| || |||||    
T  22656765 actctactccacc 22656777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 28318116 - 28318071
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  28318116 aacatccacttttttaattcccaacactccacatcattttctctct 28318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 45549693 - 45549581
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| |||||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  45549693 caacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaattttta-cctctccaatagttttttcattcaa 45549595  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  45549594 caccctaccccacc 45549581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 33508601 - 33508491
Alignment:
Q  168 caacacccactttttt-aattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattca 264  Q
    ||||||||| |||||| ||||||||||| || || ||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||| |    
T  33508601 caacacccatttttttcaattcccaacactctacgtcattttctctctcttaattcaacactcattcaattttta-cctctccaataattttttcattta 33508503  T
Q  265 acactcaacccc 276  Q
    |||||| |||||    
T  33508502 acactctacccc 33508491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 43202214 - 43202111
Alignment:
Q  168 caacacccacttttttaattcccaa-cattccacatcattttctctcttttattcaacattcatt---caacttttaccctcttcaatgatttttcattc 263  Q
    ||||| ||||||||| ||| ||||| || | ||||| ||||||||||| ||| |||||| |||||   ||||||||||||||| ||||| ||||| ||||    
T  43202214 caacatccactttttcaatgcccaatcacttcacattattttctctctcttactcaacactcattattcaacttttaccctctccaatggttttttattc 43202115  T
Q  264 aaca 267  Q
    ||||    
T  43202114 aaca 43202111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 38351584 - 38351652
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    ||||||||||||| |||||| ||||||||||||||||| |  | |||||||||||||| || |||||||    
T  38351584 cacttttttaatttccaacactccacatcattttctctttcataattcaacattcatttaatttttacc 38351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 32748805 - 32748907
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaacactcaaccc 275  Q
    ||||| ||||||||||| ||||||| |||||||||||  | ||| |||| |||||||| ||||| | ||| |||||| ||||||||||||||| | ||||    
T  32748805 tttttcaattcccaacactccacattattttctctctcataatttaacactcattcaattttta-catctccaatgattttttcattcaacaccctaccc 32748903  T
Q  276 cacc 279  Q
    ||||    
T  32748904 cacc 32748907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 37951745 - 37951848
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct---tttattcaacattcattcaacttttaccctcttcaat-gatttttcattc 263  Q
    ||||||| ||||||| ||||||||||| |||| ||||||||| ||||   || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||    
T  37951745 caacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattc 37951843  T
Q  264 aacac 268  Q
    |||||    
T  37951844 aacac 37951848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 1940695 - 1940634
Alignment:
Q  218 attcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||||||| | |||||||||||||||||||||||   ||||||| |||||||  ||||||||    
T  1940695 attcaacacttattcaacttttaccctcttcaatagattttcatacaacactttaccccacc 1940634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 20354221 - 20354333
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||| ||||||| |||||| |||| ||||||||||||| ||| |  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  20354221 caacacctactttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaattttta-cctctccaatggttttttcattcaa 20354319  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  20354320 caccctaccccacc 20354333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 8176377 - 8176266
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  8176377 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaaca 8176278  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  8176277 ctctaccccacc 8176266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 14278826 - 14278935
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14278826 caacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccctctccaatggtttttcattcaaca 14278925  T
Q  268 ctcaacccca 277  Q
    ||| ||||||    
T  14278926 ctctacccca 14278935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 4577008 - 4577113
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 4577107  T
Q  274 cccacc 279  Q
    ||||||    
T  4577108 cccacc 4577113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 41153080 - 41152969
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||| ||||| ||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41153080 caacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttaccttcttcaatgatttttcattcaaca 41152981  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  41152980 ctctaccccacc 41152969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 41263359 - 41263470
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  41263359 caacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttaccctctccaatggtttttcattcaaca 41263458  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  41263459 ctataccccacc 41263470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 15972565 - 15972675
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    |||| ||||||||| |||| |||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15972565 aacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctcttcaataatttttcattcaacac 15972664  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  15972665 tctaccccacc 15972675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 11954774 - 11954885
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||| |||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  11954774 caacacctacttttctaattatcaacactccacatcattttctctctcttattcaacattcattcaacttttatcctcgtcaatggtttttcattcaaca 11954873  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  11954874 ctctaccccacc 11954885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 25032350 - 25032461
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||||| |||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||  |||||||||||||    
T  25032350 caacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctttaatgggttttcattcaaca 25032449  T
Q  268 ctcaaccccacc 279  Q
     || ||||||||    
T  25032450 ttctaccccacc 25032461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 10569878 - 10569773
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||| | ||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||| ||    
T  10569878 ccactttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctctccaatggtttttcattcaacactctac 10569779  T
Q  274 cccacc 279  Q
    ||||||    
T  10569778 cccacc 10569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 25652816 - 25652921
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| ||||| || ||||||||||| ||||| ||||||||||||||||| ||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctccaatggtttttcattcaacactctac 25652915  T
Q  274 cccacc 279  Q
    ||||||    
T  25652916 cccacc 25652921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 34529456 - 34529357
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||| ||||||||||||| |||||   ||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  34529456 caacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaacttttatcctctccaatggtttttcattcaaca 34529357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 8681354 - 8681260
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactc 270  Q
    ||||||| |||| |||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  8681354 actttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctccaatggtttttctttcaacactc 8681260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 27407819 - 27407711
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcatttt--ctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    |||| ||||||||| |||| |||| | |||||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaac 27407720  T
Q  267 actcaaccc 275  Q
    |||| ||||    
T  27407719 actctaccc 27407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 31013918 - 31013806
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  31013918 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 31013820  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  31013819 caccctaccccacc 31013806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 34918543 - 34918453
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||| |||| |||||| ||||||||||||||| ||||  |||||||| |||||||||||||||||||| || |||||||||||||||||    
T  34918543 cactttttcaatttccaacactccacatcattttctttctt--attcaacactcattcaacttttaccctctccattgatttttcattcaaca 34918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 32976650 - 32976539
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| ||||| |||||||    
T  32976650 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttattcaac 32976552  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  32976551 accctaccccacc 32976539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 12912875 - 12912957
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgattttt 258  Q
    |||||||||||||| |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||||||  ||||||||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctctaatgattttt 12912957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 4938182 - 4938295
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    |||||| || ||||| ||||| ||| | || |||||||||||||||| ||| ||||||| | |||||||||||||||||| |||||| ||||||||||||    
T  4938182 caacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaattcaacttttaccctctccaatgattttttcattcaa 4938281  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  4938282 cactctaccccacc 4938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 13479898 - 13479786
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  13479898 caacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta-catctccaatagttttttcattcaa 13479800  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  13479799 caccctaccccacc 13479786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 27407116 - 27407004
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattc-aacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||| || |||| |||| |||||||||||||| ||||| |||||| ||||||||||||    
T  27407116 aacactcactttttcaattcccaacactccacattattttctctctcttaattctaacactcattcaactttta-cctctccaatgattttttcattcaa 27407018  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  27407017 cactctaccccacc 27407004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 40888891 - 40889003
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  40888891 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatagttttttcattcaa 40888989  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  40888990 caccctaccccacc 40889003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 37882503 - 37882394
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||  |||||||||  |||||||||||||||| | | ||||  ||||||||||||||    
T  37882503 caacacccattttttcaattcccaacactccacatcattttttctc--ttattcaacgctcattcaacttttaccatttccaatagtttttcattcaaca 37882406  T
Q  268 ctcaaccccacc 279  Q
    |||  |||||||    
T  37882405 ctcttccccacc 37882394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 23089515 - 23089627
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  23089515 caacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaattttta-cctctccaatggttttttcattcaa 23089613  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  23089614 caccctaccccacc 23089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 27942488 - 27942600
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  27942488 caacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 27942586  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  27942587 caccctaccccacc 27942600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 30648187 - 30648075
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||| ||| |||||| |||||| ||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  30648187 caacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 30648089  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  30648088 cactctaccccacc 30648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 19241313 - 19241424
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  19241313 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 19241411  T
Q  266 cactcaaccccac 278  Q
    ||| | |||||||    
T  19241412 caccctaccccac 19241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 42608095 - 42608019
Alignment:
Q  191 aacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||| ||||| |||||||||||||||||||||||| | |||||||||||||||| | ||||  ||||||||||||||    
T  42608095 aacactccacgtcattttctctcttttattcaacacttattcaacttttaccctttccaatagtttttcattcaaca 42608019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 3454733 - 3454844
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||||||||  | |||||||| |||||||| |||||  |||| |||||| ||||||||||||    
T  3454733 caacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaattttta--ctctccaatgattttttcattcaa 3454830  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  3454831 caccctaccccacc 3454844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 25670980 - 25670879
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgat-ttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| |||||  |||| ||||| | |||||||||||    
T  25670980 caacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta-actctccaatggtgttttcattcaa 25670882  T
Q  266 cac 268  Q
    |||    
T  25670881 cac 25670879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 29619088 - 29618976
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  29619088 caacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaattttta-cctctccaatggttttttcattcaa 29618990  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  29618989 caccctaccccacc 29618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 23649235 - 23649130
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaa 272  Q
    |||||||| ||||||||||| |||| |||||||||||| | || |||||||||| ||| || ||||| |||||||||| | ||||||||||||||| | |    
T  23649235 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaattttta-cctcttcaatggttttttcattcaacacccta 23649137  T
Q  273 ccccacc 279  Q
    |||||||    
T  23649136 ccccacc 23649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 23809336 - 23809441
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaa 272  Q
    |||||||| ||||||||||| |||| |||||||||||| | || |||||||||| ||| || ||||| |||||||||| | ||||||||||||||| | |    
T  23809336 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaattttta-cctcttcaatggttttttcattcaacacccta 23809434  T
Q  273 ccccacc 279  Q
    |||||||    
T  23809435 ccccacc 23809441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 42807074 - 42807000
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 241  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| ||||||    
T  42807074 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttac 42807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 34709878 - 34709986
Alignment:
Q  172 acccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaacact 269  Q
    ||||||||||| ||||  ||||||||||| ||||||| ||||| || ||||||||  |||| || ||||| ||| |||||||| ||||||||||||||||    
T  34709878 acccactttttcaattttcaacattccacgtcattttttctctcttaattcaacacccatttaattttta-cctattcaatgattttttcattcaacact 34709976  T
Q  270 caaccccacc 279  Q
    | ||||||||    
T  34709977 ctaccccacc 34709986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 7651001 - 7651112
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||| | ||||| ||||||||||| ||||||||||||||||||| || ||||||||  |||| || |||||||| || |||| | |||||||||||||    
T  7651001 aacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacacccatttaatttttaccc-ctccaatggttttttcattcaac 7651099  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  7651100 accctaccccacc 7651112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 9274523 - 9274457
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaac 235  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| ||||| ||||| |||| |||||||||    
T  9274523 caacatccactttttcaattcccaacactccacatcatttt-tctctcttatttaacactcattcaac 9274457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 32363689 - 32363614
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttacc 242  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||||||||| ||||||||  |||| || |||||||    
T  32363689 caacacccacttttttaattttcaacactccacattattttctctcttttaattcaacacccatttaatttttacc 32363614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 4219515 - 4219411
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||    | ||||||||  ||||||| ||||| ||||| |||| | |||||||||||||    
T  4219515 caacacccactttttcaattcccaacacttcacatcattttctc---ataattcaacacccattcaattttta-cctctccaatggttttttcattcaac 4219420  T
Q  267 actcaaccc 275  Q
    |||| ||||    
T  4219419 actctaccc 4219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 36609286 - 36609387
Alignment:
Q  168 caacacccacttttttaatt-cccaacattccacatcattttctctctttt----------attcaacattcattcaacttttaccctcttcaatgattt 256  Q
    |||||| |||||||||| || ||||||| ||||||||||||||||||||||          |||||||| ||||||||||||||  ||||||||||||||    
T  36609286 caacacacacttttttattttcccaacactccacatcattttctctcttttccacctaataattcaacactcattcaacttttagactcttcaatgattt 36609385  T
Q  257 tt 258  Q
    ||    
T  36609386 tt 36609387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 39238419 - 39238512
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaacac 268  Q
    ||||||| ||||||||||| |||||||||||||||||||  | ||||||||| ||||||| |||||  |||| |||| | |||||||||||||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta-tctctccaataattttttcattcaacac 39238512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 42317892 - 42317996
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    |||||||| |||| |||||| |||| |||||||||||||| || ||||||||  | ||||| ||||| ||||| ||||  ||||||||||||||| | ||    
T  42317892 cactttttcaatttccaacactccatatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagtttttcattcaacaccctac 42317990  T
Q  274 cccacc 279  Q
    ||||||    
T  42317991 cccacc 42317996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 31008458 - 31008384
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||| || ||| ||||  ||||||| |||||||    
T  31008458 aacacccactttttcaattctcaacacttcacatcattttctctctcttaatttaacacccattcaatttttacc 31008384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 39008477 - 39008551
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 241  Q
    ||||| ||||||||| ||||||||||| |||| ||| ||||||||||  | ||||||||| ||||||| ||||||    
T  39008477 caacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaatttttac 39008551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 37245500 - 37245611
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  37245500 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaaca 37245599  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  37245600 ctctaccccacc 37245611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 927966 - 927855
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  927966 caacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctctaatggtttttcattcaaca 927867  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  927866 ctctaccccacc 927855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 9074293 - 9074190
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  9074293 ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 9074194  T
Q  274 ccca 277  Q
    ||||    
T  9074193 ccca 9074190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 39434086 - 39433975
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  39434086 caacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaacttttatcctctccaatgatttttcattcaaca 39433987  T
Q  268 ctcaaccccacc 279  Q
    ||| | ||||||    
T  39433986 ctctatcccacc 39433975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 1987125 - 1987229
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacc 274  Q
    |||||||| ||||| ||||| ||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||    
T  1987125 cactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctctccaatgatttttcattcaacactctacc 1987224  T
Q  275 ccacc 279  Q
    |||||    
T  1987225 ccacc 1987229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 5146786 - 5146674
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  5146786 caacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactcatttaacttttaccctctgcaatgatttttcattcaac 5146687  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  5146686 accctaccccacc 5146674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 31193058 - 31192947
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||| | ||||| |||| |||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||| ||||||||||||||    
T  31193058 caacacctattttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatggtttttcattcaaca 31192959  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  31192958 ctctaccccacc 31192947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 38901719 - 38901830
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||| ||||||||||||||    
T  38901719 caacacacactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctccaatggtttttcattcaaca 38901818  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  38901819 ctttaccccacc 38901830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 14152142 - 14152029
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| | ||||||||||||    
T  14152142 caacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaacttttaccatcttcaatggttttttcattcaa 14152043  T
Q  266 cactcaaccccacc 279  Q
    |||||  |||||||    
T  14152042 cactctgccccacc 14152029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 36855846 - 36855737
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    |||||||| ||||| ||||||||||| ||| ||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  36855846 aacaccca-tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctccaatgatttttaattcaacac 36855748  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  36855747 tctaccccacc 36855737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 12855018 - 12855130
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  12855018 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaattttta-cctctccaatggttttttcattcaa 12855116  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  12855117 caccctaccccacc 12855130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 13151559 - 13151446
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| | ||||| ||||| | ||| ||| ||||||| |||||||||||||||||||| |||| | ||||||||||||    
T  13151559 caacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctccaatggttttttcattcaa 13151460  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  13151459 cactctaccccacc 13151446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 24997079 - 24997191
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  24997079 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatagttttttcattcaa 24997177  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  24997178 caccctaccccacc 24997191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 30822658 - 30822546
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  30822658 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaattttta-cctctccaatggttttttcattcaa 30822560  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  30822559 caccctaccccacc 30822546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 39490142 - 39490253
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| |||| |||||| ||||||| || |||||||| |||||||| |||||  |||| |||||||||||||||||||    
T  39490142 caacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaattttta-tctctccaatgatttttcattcaac 39490240  T
Q  267 actcaaccccacc 279  Q
    |||| ||| ||||    
T  39490241 actctacctcacc 39490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 31174253 - 31174152
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||| ||||  ||||| |||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||| ||    
T  31174253 ccactttttcaattcccaacactccacattattta-tctctcttattcaacactcattcaacttttaccatccccaatggtttttcattcaacactctac 31174155  T
Q  274 ccc 276  Q
    |||    
T  31174154 ccc 31174152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 4296846 - 4296734
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  4296846 caacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 4296748  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  4296747 caccctaccccacc 4296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 6362953 - 6363065
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaa-tgatttttcattcaa 265  Q
    ||||| ||||||||| |||||| |||| || |||||||||||||||| ||| ||||||| |||||||||||||||||||| ||| || ||||||||||||    
T  6362953 caacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactcattcaacttttaccctctacaattgttttttcattcaa 6363051  T
Q  266 cactcaaccccacc 279  Q
    ||||  ||||||||    
T  6363052 cactttaccccacc 6363065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 22351689 - 22351577
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  22351689 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 22351591  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  22351590 caccctaccccacc 22351577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 43021740 - 43021852
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatt-tttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| || ||||||||||    
T  43021740 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttctttcattcaa 43021838  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  43021839 caccctaccccacc 43021852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 7588579 - 7588465
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct---tttattcaacattcattcaacttttaccctcttcaat-gatttttcattc 263  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||   || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||    
T  7588579 caacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattc 7588481  T
Q  264 aacactcaaccccacc 279  Q
    ||||| | ||||||||    
T  7588480 aacaccctaccccacc 7588465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8852056 - 8852168
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| ||||| || |||||  |||| |||| | ||||||||||||    
T  8852056 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaattttta-tctctccaatggttttttcattcaa 8852154  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  8852155 caccctaccccacc 8852168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 43495741 - 43495680
Alignment:
Q  218 attcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  43495741 attcaacactcattcaacttttatcctctccaatgatttttcattcaacactctaccccacc 43495680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 2780805 - 2780713
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||| |||||| ||||||| |||||||||||||||| ||||||||||   ||| ||||||||| ||||  ||| ||||||||||||||    
T  2780805 ccactttttcaattcctaacattctacatcattttctctctcttattcaacacctatttaacttttactctctctaataatttttcattcaac 2780713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 1073158 - 1073046
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||  ||||| ||||| ||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  1073158 caacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 1073060  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  1073059 cactctaccccacc 1073046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 17485816 - 17485916
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| ||||| |||||  ||||| ||||||||||||    
T  17485816 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta-cctctctaatgattttttcattcaa 17485914  T
Q  266 ca 267  Q
    ||    
T  17485915 ca 17485916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 36209549 - 36209438
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||| | || |||||||| |||||||| |||||  |||| | ||| |||| ||||||||    
T  36209549 caacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttta-tctctcctatggttttccattcaac 36209451  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  36209450 actctaccccacc 36209438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 9117811 - 9117923
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||  ||||| ||||  ||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  9117811 caacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 9117909  T
Q  266 cactcaaccccacc 279  Q
    || || ||||||||    
T  9117910 cattctaccccacc 9117923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 36526821 - 36526921
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||| || ||| ||||  |||| || ||||| ||||| |||||| |||||||||||||    
T  36526821 aacacccactttttcaattcccaacactccacattattttctctctcttaatttaacacccatttaattttta-cctctccaatgattttttcattcaac 36526919  T
Q  267 ac 268  Q
    ||    
T  36526920 ac 36526921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 44279992 - 44280103
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| |||| | |||||||||||||    
T  44279992 aacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagttttttcattcaac 44280090  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  44280091 accctaccccacc 44280103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 6333402 - 6333356
Alignment:
Q  229 attcaacttttaccctcttcaatgatttttcattcaacactcaaccc 275  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  6333402 attcaacttttatcctctccaatgatttttcattcaacactctaccc 6333356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 7763562 - 7763489
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 240  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| |||||    
T  7763562 caacaccaactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttta 7763489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 14382966 - 14383078
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| |||||| |||| ||||||||||||||||||| || ||||||||    ||||| ||||| ||||| |||| | ||||||||||||    
T  14382966 caacatccactttttcaattcctaacactccacatcattttctctctcttaattcaacaccttttcaattttta-cctctccaatggttttttcattcaa 14383064  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  14383065 caccctaccccacc 14383078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 1308772 - 1308726
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  1308772 caacatccactttttcaatttccaacactccacatcattttctctct 1308726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 17929330 - 17929284
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||| ||| ||||| ||||||||||| |||||||||||||||||||    
T  17929330 caacatccattttttcaattcccaacactccacatcattttctctct 17929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 16218889 - 16218829
Alignment:
Q  218 attcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccac 278  Q
    |||||||| |||||||| || |||||||| || |  ||||||||||||||||| |||||||    
T  16218889 attcaacactcattcaatttgtaccctctccattagtttttcattcaacactctaccccac 16218829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 17783372 - 17783483
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  17783372 caacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctctccaatggtttttcattcaaca 17783471  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  17783472 ctctaccccacc 17783483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 44451338 - 44451233
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 44451239  T
Q  274 cccacc 279  Q
    ||||||    
T  44451238 cccacc 44451233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 44651074 - 44651179
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  44651074 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 44651173  T
Q  274 cccacc 279  Q
    ||||||    
T  44651174 cccacc 44651179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 44929364 - 44929253
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||| ||||| ||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  44929364 caacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctccaatggtttttcattcaaca 44929265  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  44929264 ctctaccccacc 44929253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8464094 - 8464205
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| |||||||| |||||| |||| ||||| ||||||||||||||    
T  8464094 caacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctctccaatggtttttcattcaaca 8464193  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  8464194 ctctaccccacc 8464205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 643890 - 643785
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||| ||||||||||  |||| ||||||||||||||||| ||    
T  643890 ccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctcaaatggtttttcattcaacactctac 643791  T
Q  274 cccacc 279  Q
    ||||||    
T  643790 cccacc 643785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 41542325 - 41542434
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||| |||||||||  |||||||||||||| ||||| ||||| ||||||||||||||    
T  41542325 caacatccactttttcaattcccaacactccacatcatattctctctcttattcaac--tcattcaacttttatcctctccaatggtttttcattcaaca 41542422  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  41542423 ctctaccccacc 41542434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 44334284 - 44334385
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||| ||    
T  44334284 caacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctctccaatggtttttcattcatca 44334383  T
Q  268 ct 269  Q
    ||    
T  44334384 ct 44334385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 52933833 - 52933733
Alignment:
Q  177 cttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacccc 276  Q
    |||||| |||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||| |||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatggtttttcattcaacactctacccc 52933734  T
Q  277 a 277  Q
    |    
T  52933733 a 52933733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 52941468 - 52941368
Alignment:
Q  177 cttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacccc 276  Q
    |||||| |||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||| |||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatggtttttcattcaacactctacccc 52941369  T
Q  277 a 277  Q
    |    
T  52941368 a 52941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 20584925 - 20584814
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| |||||||| ||||||||||| |||||||||||||||| || ||||| |||| | |||||||||||| | ||| ||| ||||||||||||||||    
T  20584925 caacacacactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaacttttatcttctccaaagatttttcattcaaca 20584826  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  20584825 ctctaccccacc 20584814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 31468128 - 31468240
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||| | ||||||||||||    
T  31468128 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaattttta-cctctccaatagttttttcattcaa 31468226  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  31468227 caccctaccccacc 31468240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 45239133 - 45239245
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  45239133 caacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaattttta-cctctccaatggttttttcattcaa 45239231  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  45239232 caccctaccccacc 45239245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 45456225 - 45456113
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| ||||| ||||| |||| ||||||||||||||    
T  45456225 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaattttta-cctctccaatggatttttcattcaa 45456127  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  45456126 cactctaccccacc 45456113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 51494546 - 51494434
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||| | ||||||||||||    
T  51494546 caacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 51494448  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  51494447 caccctaccccacc 51494434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 48404325 - 48404437
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||||| ||||||||||||    
T  48404325 caacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttta-cctctccaatgattttttcattcaa 48404423  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  48404424 caccctaccccacc 48404437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 29523698 - 29523809
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||| | ||| |||||| ||||||||||||    
T  29523698 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaattttta-catctccaatgattttttcattcaa 29523796  T
Q  266 cactcaaccccac 278  Q
    ||| | |||||||    
T  29523797 caccctaccccac 29523809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 37646633 - 37646522
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||||| |||||||||||||    
T  37646633 aacacctacttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaac 37646535  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  37646534 accctaccccacc 37646522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 3755096 - 3754986
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaa-----tgatttttcattcaacac 268  Q
    ||||||||| ||||| ||||| || |||||||||||||||| |||||||||||||| |||||||||||||||| |||     |  |||||||||||||||    
T  3755096 ccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttaccctctccaatagttttttttttcattcaacac 3754997  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  3754996 tctaccccacc 3754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8468319 - 8468431
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgat-ttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  |||| |||||||| |||||   ||||| |||||||||||    
T  8468319 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaactttta-cctctctgatgatattttcattcaa 8468417  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  8468418 cactctaccccacc 8468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 48388182 - 48388070
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  48388182 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 48388084  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  48388083 caccctaccccacc 48388070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 2478402 - 2478291
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| ||||| ||||| |||||||    
T  2478402 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatggttttttattcaac 2478304  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  2478303 accctaccccacc 2478291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 48729347 - 48729419
Alignment:
Q  198 cacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactc 270  Q
    ||||||||||||||| | ||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||    
T  48729347 cacatcattttctctttcttattcaacacacattcaacttttaccctctccaatggtttttcattcaacactc 48729419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 36302977 - 36303084
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||| ||||| ||||  ||||| ||||||| ||||||||| | ||||||||||   |||||||||||||||||| ||||| ||||||||||||||    
T  36302977 caacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctccaatggtttttcattcaaca 36303076  T
Q  268 ctcaaccc 275  Q
    ||| ||||    
T  36303077 ctccaccc 36303084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 23092764 - 23092876
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||| || ||||||||  ||||||  ||||| ||||| |||||| ||||||||||||    
T  23092764 caacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcagttttta-cctctccaatgattttttcattcaa 23092862  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  23092863 caccctaccccacc 23092876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 27630534 - 27630422
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  27630534 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttta-catctccaatggttttttcattcaa 27630436  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  27630435 caccctaccccacc 27630422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 37420418 - 37420306
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  37420418 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttta-catctccaatggttttttcattcaa 37420320  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  37420319 caccctaccccacc 37420306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 33164408 - 33164519
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||| || |||||||| |||||||| ||||| | ||| |||||| |||||||||||||    
T  33164408 aacacccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaattttta-catctccaatgattttttcattcaac 33164506  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  33164507 accctaccccacc 33164519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 40500396 - 40500495
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacac 268  Q
    |||||||||||||| | |||| |||| | ||||| |||||||| || |||||||||| ||||| |||||||||||||| || || |||||||||||||||    
T  40500396 aacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctctccagtggtttttcattcaacac 40500494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 30878618 - 30878543
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||| ||||||| |||||||    
T  30878618 caacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacc 30878543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 37822565 - 37822677
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctc--ttttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| |||||||| ||||| ||||| ||||||||||||||||||   || |||||||| |||||||| ||||| ||||| |||||| |||||| |||||    
T  37822565 aacactcactttttcaattctcaacactccacatcattttctctcctcttaattcaacactcattcaattttta-cctctccaatgattttttctttcaa 37822663  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  37822664 cactctaccccacc 37822677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 31159390 - 31159494
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaac 273  Q
    ||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||||| | ||    
T  31159390 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaacaccctac 31159488  T
Q  274 cccacc 279  Q
    ||||||    
T  31159489 cccacc 31159494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 19578984 - 19578882
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat--gatttttcattca 264  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||  | |||||||||||    
T  19578984 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaattggttttttcattca 19578886  T
Q  265 acac 268  Q
    ||||    
T  19578885 acac 19578882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 36230352 - 36230462
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||| ||||||| ||||||||||| | ||||||||||| ||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  36230352 caacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 36230450  T
Q  266 cactcaacccca 277  Q
    ||||| ||||||    
T  36230451 cactctacccca 36230462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 37691357 - 37691263
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacac 268  Q
    |||||||| ||||||||||| ||||||| ||||||||||| || ||||||||| ||||||| ||||| ||||| |||| | |||||||||||||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaattttta-cctctccaatggttttttcattcaacac 37691263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 14096686 - 14096787
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||| ||||||| ||||||||||| |||| |||||||| ||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  14096686 caacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaattttta-cctctccaataattttttcattcaa 14096784  T
Q  266 cac 268  Q
    |||    
T  14096785 cac 14096787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 29919373 - 29919478
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaac 273  Q
    ||||||| ||||||||||| |||| |||||||||||||| || ||||||||   |||||| ||||  ||||| |||| | ||||||||||||||||| ||    
T  29919373 actttttcaattcccaacactccatatcattttctctctcttaattcaacacctattcaattttttacctctccaatggttttttcattcaacactctac 29919472  T
Q  274 cccacc 279  Q
    ||||||    
T  29919473 cccacc 29919478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 35847195 - 35847120
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  35847195 caacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaatttttacc 35847120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 39149071 - 39149143
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 240  Q
    ||||||||| |||||   ||| ||||| || |||||||||||||| | |||||||| ||||||||||||||||    
T  39149071 caacacccattttttctcttctcaacactctacatcattttctctatcttattcaatattcattcaactttta 39149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 47300561 - 47300459
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaatga-tttttcattcaacactcaaccc 275  Q
    ||||| ||||| || || |||||||||||||||||||||| ||||||||  ||||||| ||||| | | | |||||| ||||||||||||||||| || |    
T  47300561 tttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaattttta-cttttccaatgattttttcattcaacactctactc 47300463  T
Q  276 cacc 279  Q
    ||||    
T  47300462 cacc 47300459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 51520221 - 51520303
Alignment:
Q  177 cttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatgattttt 258  Q
    |||||| ||||  ||||| ||||||||||||| ||||| ||| || |||| | |||||||||||||||||| ||||| |||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctccaatggttttt 51520303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 45623596 - 45623531
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 240  Q
    ||||||| |||||| |||| ||||||||||||||||||| || |||||||| ||||| || |||||    
T  45623596 actttttcaattcctaacactccacatcattttctctctcttaattcaacactcatttaattttta 45623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 42601573 - 42601468
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  42601573 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 42601474  T
Q  274 cccacc 279  Q
    ||||||    
T  42601473 cccacc 42601468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 41890540 - 41890644
Alignment:
Q  175 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaacc 274  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  41890540 cactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctacc 41890639  T
Q  275 ccacc 279  Q
    |||||    
T  41890640 ccacc 41890644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 37410493 - 37410382
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  37410493 caacaccatctttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctctccaatggtttttcattcaaca 37410394  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  37410393 ctctaccccacc 37410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 42601760 - 42601867
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  42601760 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccttctccaatggtttttcattcaaca 42601859  T
Q  268 ctcaaccc 275  Q
    ||| ||||    
T  42601860 ctctaccc 42601867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 46572999 - 46572888
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||  ||||||||||||||    
T  46572999 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactcattcaacttttaccctctccaatagtttttcattcaaca 46572900  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  46572899 ctctaccccacc 46572888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 49147354 - 49147251
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccc 275  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  49147354 actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacctttttcaatgatttttcattcaacacccaaccc 49147255  T
Q  276 cacc 279  Q
    ||||    
T  49147254 cacc 49147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 49823238 - 49823133
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||| ||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatggtttttcattcaacactctac 49823139  T
Q  274 cccacc 279  Q
    ||||||    
T  49823138 cccacc 49823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 15493894 - 15493785
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||| |||||| ||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  15493894 caacaccctctttttcaattcccaacactccacatcactttctctctt--attcaacattcattcaacttttaccatctccaatgatttttcattcaaca 15493797  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  15493796 ctctaccccacc 15493785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 25450708 - 25450597
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||  ||||||||||||||    
T  25450708 caacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttatcctctccaatagtttttcattcaaca 25450609  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  25450608 ctctaccccacc 25450597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 50033666 - 50033777
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| |||||||||||||| ||||||||| |||||||||| ||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  50033666 caacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctctccaatgatttttcattcaaca 50033765  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  50033766 ctataccccacc 50033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 25832792 - 25832687
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||    
T  25832792 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaacttttaccccctccaatggtttttcattcaacactctac 25832693  T
Q  274 cccacc 279  Q
    ||||||    
T  25832692 cccacc 25832687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 49357565 - 49357460
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    |||||||||||||||| |||||| || |||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||| |||| ||    
T  49357565 ccacttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaatactctac 49357466  T
Q  274 cccacc 279  Q
    ||||||    
T  49357465 cccacc 49357460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 51427105 - 51427210
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||  ||    
T  51427105 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatggtttttcattcaacactttac 51427204  T
Q  274 cccacc 279  Q
    ||||||    
T  51427205 cccacc 51427210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 28410393 - 28410505
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||    
T  28410393 caacacccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttaccatctccaatgattttttcattcaac 28410492  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  28410493 actctaccccacc 28410505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 33934996 - 33935100
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||||  |||||||||||||||| ||    
T  33934996 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctccaatg-gttttcattcaacactctac 33935094  T
Q  274 cccacc 279  Q
    ||||||    
T  33935095 cccacc 33935100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 43022647 - 43022759
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||| | |||||||||||||    
T  43022647 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattcaac 43022746  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  43022747 actctaccccacc 43022759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 33748684 - 33748795
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||||| | ||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  33748684 caacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttaccttctccaatggtttttcattcaaca 33748783  T
Q  268 ctcaaccccacc 279  Q
    ||| | ||||||    
T  33748784 ctctatcccacc 33748795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 35853266 - 35853154
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||| | |||||||||||||    
T  35853266 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaac 35853167  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  35853166 actctaccccacc 35853154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 49710463 - 49710351
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||| | |||||||||||||    
T  49710463 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaac 49710364  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  49710363 actctaccccacc 49710351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 35424083 - 35423972
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||||| |||||||||| |||||| |||||||||||||  |||| ||||||||||||||    
T  35424083 caacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctcaaatggtttttcattcaaca 35423984  T
Q  268 ctcaaccccacc 279  Q
    ||  ||||||||    
T  35423983 ctttaccccacc 35423972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 138974 - 139087
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| || |||||| ||||||||||| ||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| |||||| ||||| ||||||    
T  138974 caacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaacttttaccctctccaatgattttttaattcaa 139073  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  139074 cactctaccccacc 139087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 33795566 - 33795458
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||||||||||||||| |||   ||||||||||| | |||||||||| ||||||||||||||| |||||||||  ||||||||||||||    
T  33795566 caacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttactctcttcaatagtttttcattcaaca 33795470  T
Q  268 ctcaaccccacc 279  Q
    ||| ||| ||||    
T  33795469 ctctaccgcacc 33795458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 49407411 - 49407300
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| |||| | |||| | ||| | |||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||    
T  49407411 caacatccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttaccttcttcaatggtttttcattcaaca 49407312  T
Q  268 ctcaaccccacc 279  Q
    | | ||||||||    
T  49407311 ccctaccccacc 49407300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 50017058 - 50017157
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||||||||      |||||||||||||||||||| ||    
T  50017058 ccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgatttttcattcaacactctac 50017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 20139363 - 20139472
Alignment:
Q  172 acccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacact 269  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||| || |||||||| |||||||||||||||| ||| |||| | ||||||||||||||||    
T  20139363 acccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactcattcaacttttaccttctccaatggttttttcattcaacact 20139462  T
Q  270 caaccccacc 279  Q
    | ||||||||    
T  20139463 ctaccccacc 20139472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 25790849 - 25790737
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  25790849 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaattttta-cctctccaatggttttttcattcaa 25790751  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  25790750 caccctaccccacc 25790737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 30418503 - 30418392
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| ||||| |||||||    
T  30418503 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttattcaac 30418405  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  30418404 accctaccccacc 30418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 42258316 - 42258437
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt----------attcaacattcattcaacttttaccctcttcaat-gattt 256  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| ||          |||||||||||||||||||||||||||||||||| | |||    
T  42258316 caacacccactttttctcttcccaacactccacatcattttctctctcttccatctatacattcaacattcattcaacttttaccctcttcaatagtttt 42258415  T
Q  257 ttcattcaacactcaaccccac 278  Q
    |||||||||||||| |||||||    
T  42258416 ttcattcaacactctaccccac 42258437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 6048770 - 6048658
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  6048770 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 6048672  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  6048671 caccctaccccacc 6048658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 12974667 - 12974780
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||  ||||  ||||| |||| | ||||||||||||    
T  12974667 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcatttttttacctctccaatggttttttcattcaa 12974766  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  12974767 cactctaccccacc 12974780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 17466514 - 17466626
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  17466514 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 17466612  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  17466613 caccctaccccacc 17466626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 47144172 - 47144284
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| | |||||| ||||| ||||| |||| | ||||||||||||    
T  47144172 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaattttta-cctctccaatagttttttcattcaa 47144270  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  47144271 caccctaccccacc 47144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 47701137 - 47701025
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatca-ttttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||||||||||||| ||||| ||||| ||||||||| |||| ||||| |||||||||| ||||| ||||||||| |||| ||  | |||||| ||||||    
T  47701137 caacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaacttttactctctccatggttttttctttcaac 47701038  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  47701037 actctaccccacc 47701025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 29701681 - 29701782
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||| || |||| | ||||||||||||    
T  29701681 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttaccc-ctccaatggttttttcattcaa 29701779  T
Q  266 cac 268  Q
    |||    
T  29701780 cac 29701782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 30862838 - 30862760
Alignment:
Q  201 atcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||||||||||||| |||||||||| ||||| ||  |||||||||| ||||||||||||||||||||||| || |||||    
T  30862838 atcattttctctctcttattcaacactcatttaatatttaccctctccaatgatttttcattcaacactctactccacc 30862760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 5845214 - 5845102
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  5845214 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttta-catctccaatggttttttcattcaa 5845116  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  5845115 caccctaccccacc 5845102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 6832383 - 6832495
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| |||||| |||||||| |||||||| |||||  |||| |||| | ||||||||||||    
T  6832383 caacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaattttta-tctctccaatggttttttcattcaa 6832481  T
Q  266 cactcaaccccacc 279  Q
    || || ||||||||    
T  6832482 cattctaccccacc 6832495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 10426505 - 10426393
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||| ||| || |  ||||||| ||||| ||||| |||||| ||||||||||||    
T  10426505 caacacccattttttcaattcccaacactccacatcattttctctcttttaatttaatacccattcaattttta-cctctccaatgattttttcattcaa 10426407  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  10426406 caccctaccccacc 10426393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 32120512 - 32120400
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| |||| | ||||||||||||    
T  32120512 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagttttttcattcaa 32120414  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  32120413 caccctaccccacc 32120400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 41183273 - 41183385
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||| ||| ||||| ||||| |||| | ||||||||||||    
T  41183273 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatacaattttta-cctctccaatggttttttcattcaa 41183371  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  41183372 caccctaccccacc 41183385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 42560900 - 42561012
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||  | ||||| |||||  |||| |||| | ||||||||||||    
T  42560900 caacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacaccctttcaattttta-actctccaatagttttttcattcaa 42560998  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  42560999 caccctaccccacc 42561012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 50415904 - 50415792
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  50415904 caacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttcattcaa 50415806  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  50415805 caccctaccccacc 50415792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 7521211 - 7521100
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||||| |||||| |||| |||||| | || |||||||||||||| |||||||||| |||||||||   |||  |||| |||| ||| ||||||||||    
T  7521211 caacacccgctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaacaaatacattctttaatggtttatcattcaaca 7521112  T
Q  268 ctcaaccccacc 279  Q
     |||||||||||    
T  7521111 atcaaccccacc 7521100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 44084308 - 44084409
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| ||||| ||||| |||| | ||||||||||||    
T  44084308 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttta-cctctccaatagttttttcattcaa 44084406  T
Q  266 cac 268  Q
    |||    
T  44084407 cac 44084409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 11908018 - 11908130
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||||  | ||||||||  ||||||| ||||| |||||||||| | ||||||||||||    
T  11908018 caacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaattttta-cctcttcaatggttttttcattcaa 11908116  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  11908117 caccctaccccacc 11908130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 27847408 - 27847520
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  |||| || ||||| |||||||||| | ||||||||||||    
T  27847408 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccatttaattttta-cctcttcaatggttttttcattcaa 27847506  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  27847507 caccctaccccacc 27847520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 36178778 - 36178666
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| | || ||||||||||||||  | ||||||||| ||||||| ||||| ||||| |||| | ||||||||||||    
T  36178778 caacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatccattcaattttta-cctctccaatggttttttcattcaa 36178680  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  36178679 caccctaccccacc 36178666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 51999311 - 51999238
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 240  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||    
T  51999311 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 51999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 43473889 - 43473964
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||| || ||||||||  ||||||| |||||||    
T  43473889 caacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacacccattcaatttttacc 43473964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 44995259 - 44995318
Alignment:
Q  210 tctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacact 269  Q
    ||||| ||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  44995259 tctctcttatttaacattcattcaacttttaccctcagcaatggtttttcattcaacact 44995318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 50176149 - 50176062
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaa 265  Q
    ||||| ||||||||||| ||||||||||||| ||||| |||||||||    |||||||||||||  ||||| ||| ||||||||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttactttcttcgatggtttttcattcaa 50176062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 46123925 - 46124026
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||| ||||||| |||| ||||||||| ||||||||||||||||  | |||||||| |||||||| ||||| ||||| || ||| ||||||||||||    
T  46123925 caacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaattttta-cctctccattgattttttcattcaa 46124023  T
Q  266 cac 268  Q
    |||    
T  46124024 cac 46124026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 4045979 - 4046091
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | || || ||||| ||||| |||| | ||||||||||||    
T  4045979 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccttttaattttta-cctctccaatagctttttcattcaa 4046077  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  4046078 caccctaccccacc 4046091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 26165628 - 26165516
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  26165628 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaattttta-cctctccaatggttttttcattcaa 26165530  T
Q  266 cactcaaccccacc 279  Q
     || | ||||||||    
T  26165529 aaccctaccccacc 26165516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 38572220 - 38572116
Alignment:
Q  176 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaacactcaac 273  Q
    ||||||| ||||| ||||| ||||||| ||||||||||| || |||||||||  |||||| ||||| ||||| |||| | ||||||||||||||||| ||    
T  38572220 actttttcaattctcaacactccacattattttctctctcttaattcaacatctattcaattttta-cctctccaatggttttttcattcaacactctac 38572122  T
Q  274 cccacc 279  Q
    ||||||    
T  38572121 cccacc 38572116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 52000126 - 52000062
Alignment:
Q  178 ttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 241  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||||||| |||||| ||||||    
T  52000126 ttttttaattcccaacactccacatcattttctctctcataattcaacatttattcaatttttac 52000062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 55026738 - 55026850
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||| ||||| ||||  ||||| | ||| ||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  55026738 caacacccattttttcaattttcaacacttcacttcattttctctctcttaattcaacactcattcaattttta-cctctccaatggttttttcattcaa 55026836  T
Q  266 cactcaaccccacc 279  Q
    || || ||||||||    
T  55026837 cattctaccccacc 55026850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 49028617 - 49028573
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctct 212  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||    
T  49028617 caacacacacttttttaattcccaacactccatatcattttctct 49028573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 53722440 - 53722492
Alignment:
Q  217 tattcaacattcattcaacttttaccctcttcaatgatttttcattcaacact 269  Q
    ||||||| ||| ||||||||||||| |||| ||||| ||||||||||||||||    
T  53722440 tattcaatatttattcaacttttactctctccaatggtttttcattcaacact 53722492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 37183911 - 37183844
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaa 234  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||| || ||||||||  |||||||    
T  37183911 caacactcactttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 37183844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 7008054 - 7008100
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||||    
T  7008054 caacacccactttttcaatttccaacactctacatcattttctctct 7008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 35472700 - 35472654
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct 214  Q
    ||||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  35472700 caacatccactttttcaattcccaacactccacattattttctctct 35472654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 48887055 - 48886948
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatgattttt-cattcaa 265  Q
    ||||| ||||||||| |||||||||||     ||| ||||||||||| ||| || ||||| ||||||| ||||||| ||| ||||| ||||| |||||||    
T  48887055 caacatccactttttcaattcccaaca-----cattattttctctctcttaatttaacatccattcaatttttacc-tctccaatggttttttcattcaa 48886962  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  48886961 cactctaccccacc 48886948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 6380557 - 6380452
Alignment:
Q  174 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaacactcaac 273  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  6380557 ccactttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctccaatggtttttcattcaacactctac 6380458  T
Q  274 cccacc 279  Q
    ||||||    
T  6380457 cccacc 6380452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 29428592 - 29428481
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  29428592 caacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctcaaatggtttttcattcaaca 29428493  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  29428492 ctctaccccacc 29428481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 24348430 - 24348542
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||| | ||||||||||||    
T  24348430 caacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacatccattcaattttta-cctcttcaatggttttttcattcaa 24348528  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  24348529 cactctaccccacc 24348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 6725699 - 6725587
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaac 266  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||| | |||||||||||||    
T  6725699 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattcaac 6725600  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  6725599 actctaccccacc 6725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 22627833 - 22627945
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattc-aacttttaccctcttcaatgatttttcattcaac 266  Q
    |||||||||| |||| |||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||||| | ||| ||||||||||||||||| |    
T  22627833 caacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaaacttttatcttctccaatgatttttcattcagc 22627932  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  22627933 actctaccccacc 22627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 32359743 - 32359854
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||| ||||  |||||||||||||     
T  32359743 caacactcaatttttcaattcccaacattccacatcattttctctctcttattcaacactcattccatttttaccctctccaatagtttttcattcaacg 32359842  T
Q  268 ctcaaccccacc 279  Q
     || ||||||||    
T  32359843 ttctaccccacc 32359854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 631515 - 631627
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  631515 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaattttta-cctctccaatggttttttcattcaa 631613  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  631614 caccctaccccacc 631627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 30446241 - 30446353
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||||||| ||||| |||||| |||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||||| ||||||||||||    
T  30446241 caacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaa 30446339  T
Q  266 cactcaaccccacc 279  Q
    ||||| ||||||||    
T  30446340 cactctaccccacc 30446353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 34838578 - 34838689
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| ||||| |||||||    
T  34838578 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatggttttttattcaac 34838676  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  34838677 accctaccccacc 34838689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 8660556 - 8660657
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||| | ||||||||||||    
T  8660556 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaattttta-cctctccaatggttttttcattcaa 8660654  T
Q  266 cac 268  Q
    |||    
T  8660655 cac 8660657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 12501832 - 12501941
Alignment:
Q  171 cacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaacac 268  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| |||||  ||||| |||||||||||||||    
T  12501832 cacccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacccattcaattttta-cctctctaatgattttttcattcaacac 12501930  T
Q  269 tcaaccccacc 279  Q
    || ||||||||    
T  12501931 tctaccccacc 12501941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 34328278 - 34328390
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||| | ||| |||| | ||||||||||||    
T  34328278 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttta-catctccaatggttttttcattcaa 34328376  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  34328377 caccctaccccacc 34328390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 12512911 - 12513022
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||| ||||||||| ||||  ||||||||||||||||||| ||||| || ||||||||  ||||||| ||||| ||||| |||||| |||||||||||||    
T  12512911 aacatccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaac 12513009  T
Q  267 actcaaccccacc 279  Q
    |||| ||||||||    
T  12513010 actctaccccacc 12513022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 197801 - 197913
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||| || ||||||||  ||||||| ||||| | ||| |||||| ||||||||||||    
T  197801 caacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaattttta-catctccaatgattttttcattcaa 197899  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  197900 caccctaccccacc 197913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 10883869 - 10883969
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaa 265  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| ||||| |||||| ||||||||||||    
T  10883869 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgattttttcattcaa 10883967  T
Q  266 ca 267  Q
    ||    
T  10883968 ca 10883969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 17961338 - 17961226
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || ||||||||  ||| ||| ||||| ||||| |||| | ||||||||||||    
T  17961338 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaattttta-cctctccaatggttttttcattcaa 17961240  T
Q  266 cactcaaccccacc 279  Q
    ||| | ||||||||    
T  17961239 caccctaccccacc 17961226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8669887 - 8669998
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatgatttttcattcaac 266  Q
    ||||| ||||||||| |||| |||||| | ||||| ||||||||||| || ||||||||  ||||||| ||||| ||||| ||||| |||||||||||||    
T  8669887 caacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacccattcaattttta-cctctccaatggtttttcattcaac 8669985  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  8669986 accctaccccacc 8669998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 8218964 - 8219054
Alignment:
Q  190 caacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctcttcaatgatttt-tcattcaacactcaaccccacc 279  Q
    ||||| ||||||| ||||||||||| ||| |||||||  ||||||||||||||| ||| ||||| |||| ||||||||||||| ||||||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttacc-tctccaatggttttttcattcaacactctaccccacc 8219054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 25834668 - 25834618
Alignment:
Q  229 attcaacttttaccctcttcaatgatttttcattcaacactcaaccccacc 279  Q
    |||||||||||||||||| ||||| |||||| || ||||||| ||||||||    
T  25834668 attcaacttttaccctctccaatggtttttcgttgaacactctaccccacc 25834618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 30612 - 30501
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| ||||| ||||| |||| || ||||||||||| |||||||||| | ||||||||||||| |||| ||||| ||||||||||||||    
T  30612 caacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttattcaacttttactctctccaatggtttttcattcaaca 30513  T
Q  268 ctcaaccccacc 279  Q
    ||| ||||||||    
T  30512 ctctaccccacc 30501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 124013 - 124119
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttcaatgatttttcattcaaca 267  Q
    ||||| ||||||||| |||| |||||| ||||||||||||| ||||||  |||||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  124013 caacatccactttttcaatttccaacactccacatcattttttctctt--attcaacactcattcaacttttaccatctccaatggtttttcattcaaca 124110  T
Q  268 ctcaacccc 276  Q
    ||| |||||    
T  124111 ctctacccc 124119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 57817 - 57706
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaat-gatttttcattcaa 265  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||| |||||||||| | ||||||||||||    
T  57817 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctcttcaatggttttttcattcaa 57719  T
Q  266 cactcaaccccac 278  Q
    ||| | |||||||    
T  57718 caccctaccccac 57706  T

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Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 66145 - 66034
Alignment:
Q  169 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctcttcaatga-tttttcattcaac 266  Q
    |||||| ||||||| ||||| ||||| |||||||||||||||||||  | |||||||| |||||||| ||||| |||||||||| | |||||||||||||    
T  66145 aacacctactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaattttta-cctcttcaataattttttcattcaac 66047  T
Q  267 actcaaccccacc 279  Q
    || | ||||||||    
T  66046 accctaccccacc 66034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 5397 - 5322
Alignment:
Q  168 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 242  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | || ||||||||| ||||||| |||||||    
T  5397 caacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccattcaatttttacc 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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