View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_high_117 (Length: 269)
Name: NF6076_high_117
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_high_117 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 12837393 - 12837154
Alignment:
| Q |
20 |
gactactactatttgccctaaacaagttaaaacataaaacgagacagcaaacggtagctaagtatgtgtttttcaataagataaagtagagcgaaaacat |
119 |
Q |
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| T |
12837393 |
gactactactatttgccctaaacaagttaaaacttaaaacgagacagcaaacggtagctacgtatgtgtttttcaataagataaagtagagcgaaaacat |
12837294 |
T |
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| Q |
120 |
ctttcaaacttgcttcctgtcttgttcgaaaataagcatacattttcattgatgtgctttcttcatcttttttctattgcttctcctcataaaaacaaca |
219 |
Q |
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| T |
12837293 |
ctttcaaacttggttcctgtcttgttcgaaaataattatacattttcattgatgtgctttcttcatcttttttctattgcttctcctcataaaaacaaca |
12837194 |
T |
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| Q |
220 |
ccccttttcttttcattctcatctcacactttctcctttg |
259 |
Q |
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||||||||||||||||||||||||||||||||||| |||| |
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| T |
12837193 |
ccccttttcttttcattctcatctcacactttctcttttg |
12837154 |
T |
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