View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_high_186 (Length: 226)
Name: NF6076_high_186
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_high_186 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 21 - 202
Target Start/End: Complemental strand, 24054686 - 24054505
Alignment:
| Q |
21 |
ctgattgaaggcgtatgtatgccctctatttcaataactctgatgttgagtttattagaagacgtgtagatggggtagttcatgctttagcaaggatggt |
120 |
Q |
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| T |
24054686 |
ctgattgaaggcgtatgtatgccctctatttcaataactctagtgttgagtttattagatgacgtgtagatggggtagttcatgctttagcaaggatggt |
24054587 |
T |
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| Q |
121 |
gtcggtctttttattaatacaccatcttatgttgatcatattatattacaaataaaatgaatttgattttccctcttaaaat |
202 |
Q |
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| T |
24054586 |
gtcggtctttttattgatacaccatcttatgttgatcatattatattacaaataaaatgaatttgattttcccttttaaaat |
24054505 |
T |
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