View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_123 (Length: 265)
Name: NF6076_low_123
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_123 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 2705848 - 2705611
Alignment:
| Q |
8 |
ccaagaaaatcctctacttttttatttcataagaaagtgcttattcttttaattatagtgaagaatttaaggcttatcaatcatctttcaggtttcaaga |
107 |
Q |
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| T |
2705848 |
ccaataaaatcctctacttttttatttcataagaaagtgcttattcttttaattatagtgaagaatttaaggcttatcaatcatctttcaggtttcaaga |
2705749 |
T |
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| Q |
108 |
gatagtacctttgaagacctcaacagtaataggggcagaagatccatcagtggcaacaaattggaataatcttataggaaaaaccctaaacaacaaattt |
207 |
Q |
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| T |
2705748 |
gatagtacctttgaagacctcaacagtaataggggcagaagatccatcagtggcaacaaattggaataatcttataggaaaaaccctaaacaacaaattt |
2705649 |
T |
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| Q |
208 |
gatttcccatggttaacacctatgttaaattcatcctt |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2705648 |
gatttcccatggttaacacctatgttaaattcatcctt |
2705611 |
T |
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