View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_142 (Length: 248)
Name: NF6076_low_142
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_142 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 39210870 - 39210639
Alignment:
| Q |
1 |
tgtgggtaattatcggtaaaggtgcaatggttggttggttttcagtccaaaaatctccaaactgaccaaatttatattggtctcgnnnnnnnnnnnnnnn |
100 |
Q |
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| T |
39210870 |
tgtgggtaattatcggtaagggtgcaatggttggttggttttcagtccaaaaatctccaaactgaccaaatttatattggtctcgttttgttttttgtgt |
39210771 |
T |
|
| Q |
101 |
nnnncataagctgaaatgtacaaagtaaattggtgacaatcggattggtttgcctgaaaatgcaattaacaaaacttttgttcggtcttaccaatatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39210770 |
ttttcataagctgaaatgtacaaagtaaattggtgacaatcggattggtttgcctgaaaatgcaattaacaaaacttttgttcggtcttaccaatatatt |
39210671 |
T |
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| Q |
201 |
attaagaattgttgattctttgttgataatac |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
39210670 |
attaagaattgttgattctttgttgataatac |
39210639 |
T |
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