View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_147 (Length: 246)
Name: NF6076_low_147
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_147 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 10479279 - 10479048
Alignment:
| Q |
1 |
aaaattggtagtgtatataatgtgtctattttacgtgtagatgtacctaatatatggcactaataatttcttttgataggaaccaatcatctaattctat |
100 |
Q |
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| T |
10479279 |
aaaattggtagtgtatataatgtgtctattttacgtgtagatgtacctaatatatggcgctaataattttttttcataggaaccaatcatctaattctat |
10479180 |
T |
|
| Q |
101 |
--gtttcagttatttcatttgtataaggttcttcatttaaatttgaattctggtttatgtttactattttatttctgtaaattcgatgttgagagggaaa |
198 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10479179 |
atgtttcaattatttcatttgtataaggttcttcatttaaatttgaattctggtttatggttactattttatttctgtaaattcgatgttgagagggaaa |
10479080 |
T |
|
| Q |
199 |
tgaagtagttttttgtttggaacctgtaataa |
230 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
10479079 |
tgaagtagttttttgtttggaacctgtaataa |
10479048 |
T |
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