View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_149 (Length: 244)
Name: NF6076_low_149
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_149 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 35797201 - 35796968
Alignment:
| Q |
7 |
atggttgtgattacacaagataactcatagaaaagaaagaagatatgaaattttgcctggaatacaagtgaaaagctttctaacataaagtaagtatttg |
106 |
Q |
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| T |
35797201 |
atggttgtgattacacaagataactcatagaaaagaaagaagatatgaaattttgcctggaatacaattgaaaagctttctaacataaagtaagtatttg |
35797102 |
T |
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| Q |
107 |
agataagggttcaattgcctctttctagtttagacttgatttggattctacgcattttacaacattttaagaagctccaattgaagtttcctacaactga |
206 |
Q |
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| T |
35797101 |
agataagggttcaattgcctctttctagtttagacttgatttggattctacgcattttacaacattttaagaagctccaattgaagtttcctacaactaa |
35797002 |
T |
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| Q |
207 |
ataatttaaataactcattgtttgtctatttcat |
240 |
Q |
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|||||||||||||||| ||||||||||||||||| |
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| T |
35797001 |
ataatttaaataactcgttgtttgtctatttcat |
35796968 |
T |
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