View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_157 (Length: 242)
Name: NF6076_low_157
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_157 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 55034190 - 55033963
Alignment:
| Q |
1 |
tgcagataaaaagatacattatgcacttttttaatacctatctagcttgtgtagcagcttctagttgcatttatgtcatacttgaaatttgttattagtc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
55034190 |
tgcagataaaaagatacattatgcacttttttaatacctatctagcttgtgtagcagcttctagttgcatttatgtcatagttgaaatttgttattagtc |
55034091 |
T |
|
| Q |
101 |
acttagttccaacaaactgacaaaactatcagttagttcaaacacactgacaaaactatcagttagtttagggttttttaatgacaagtatcagatgtta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55034090 |
acttagttccaacaaactgacaaaactatcagttagttcaaacacactgacaaaactatcagttagtttagggttttttaatgacaagtatcagatgtta |
55033991 |
T |
|
| Q |
201 |
tattattagtgaagggagttgaacctat |
228 |
Q |
| |
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|||||||||||||||||||||||||||| |
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|
| T |
55033990 |
tattattagtgaagggagttgaacctat |
55033963 |
T |
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