View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_187 (Length: 229)
Name: NF6076_low_187
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_187 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 40382737 - 40382541
Alignment:
| Q |
17 |
caaagggattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagctgttgaagagcttgagtagtacactagggactaac |
116 |
Q |
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| T |
40382737 |
caaagggattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagctgttgaagagcttgagtagtacactagggactaac |
40382638 |
T |
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| Q |
117 |
ataacgagttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaacttagtaaatggaactgcttgttcatcaccattg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382637 |
ataacgagttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaacttagtaaatggaactgcttgttcatcaccattg |
40382541 |
T |
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