View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6076_low_38 (Length: 432)
Name: NF6076_low_38
Description: NF6076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6076_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 19 - 428
Target Start/End: Original strand, 35810420 - 35810829
Alignment:
| Q |
19 |
cataccttatttcaattatgtcctattgttcaatttaccatctctttaaatatttatctttgtcttttgttgcaggtggatatgttacaaccggaggcat |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35810420 |
cataccttatttcaattatgtcctattgttcaatttaccatctctttaaatatttatctttgtcttttgttgtaggtggatatgttacaaccggaggcat |
35810519 |
T |
|
| Q |
119 |
tattggattccttttttcacggaatcctgcaacactggccagtggtgtgctctttgggggtgctttactattcctcagcacctttagcttgaaggtctgg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35810520 |
tattggattccttttttcacggaatcctgcaacactggccagtggtgtgctctttgggggtgctttactattcctcagcacctttagcttgaaggtctgg |
35810619 |
T |
|
| Q |
219 |
aggcaaggaaagtcaagtttaccatttattctaggacaagcaggtataagatttaatcagcattaagactccattgatcttggagttaaaagtaaagaaa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35810620 |
aggcaaggaaagtcaagtttaccatttattctaggacaagcaggtataagatttaatcagcattaagactccattgatcttggagttaaaagtaaagaaa |
35810719 |
T |
|
| Q |
319 |
catgaaaggctgcagcatgatttatttggatagttgttctttaatcttttgttctgtaactttgcagcattggcagggatccttttctggaaaaactttc |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35810720 |
catgaaaggctgcagcatgatttatttggatagttgttctttaatcttttgttctgtaattttgcagcattggcagggatccttttctggaaaaactttc |
35810819 |
T |
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| Q |
419 |
agagctactc |
428 |
Q |
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|||||||||| |
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| T |
35810820 |
agagctactc |
35810829 |
T |
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