View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6079_high_10 (Length: 440)

Name: NF6079_high_10
Description: NF6079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6079_high_10
NF6079_high_10
[»] chr1 (21 HSPs)
chr1 (20-110)||(9813541-9813631)
chr1 (398-440)||(48897075-48897117)
chr1 (398-440)||(35283571-35283613)
chr1 (53-112)||(9828363-9828422)
chr1 (401-440)||(44019346-44019385)
chr1 (398-440)||(3560339-3560381)
chr1 (398-440)||(6462994-6463036)
chr1 (398-440)||(7166185-7166227)
chr1 (398-440)||(11215071-11215113)
chr1 (398-440)||(16526135-16526177)
chr1 (398-440)||(18467156-18467198)
chr1 (398-440)||(19011425-19011467)
chr1 (398-440)||(22563456-22563498)
chr1 (398-440)||(32589447-32589489)
chr1 (398-440)||(36726631-36726673)
chr1 (398-440)||(45333670-45333712)
chr1 (398-440)||(45517226-45517268)
chr1 (398-440)||(46965810-46965852)
chr1 (398-440)||(52369667-52369709)
chr1 (408-440)||(28502657-28502689)
chr1 (398-438)||(51050262-51050302)
[»] chr2 (17 HSPs)
chr2 (397-440)||(17601149-17601192)
chr2 (398-437)||(5613027-5613066)
chr2 (401-440)||(13292965-13293004)
chr2 (397-440)||(21438904-21438947)
chr2 (398-440)||(13773470-13773512)
chr2 (398-440)||(17034805-17034847)
chr2 (398-440)||(17089313-17089355)
chr2 (398-440)||(27913428-27913470)
chr2 (398-440)||(34355791-34355833)
chr2 (398-440)||(36182712-36182754)
chr2 (398-440)||(41566832-41566874)
chr2 (398-440)||(43936771-43936813)
chr2 (398-440)||(44857192-44857234)
chr2 (398-435)||(30390327-30390364)
chr2 (399-440)||(32609146-32609187)
chr2 (401-437)||(22574382-22574418)
chr2 (404-440)||(27082390-27082426)
[»] scaffold0276 (1 HSPs)
scaffold0276 (398-440)||(1330-1372)
[»] scaffold0038 (1 HSPs)
scaffold0038 (398-440)||(23430-23472)
[»] chr8 (19 HSPs)
chr8 (398-440)||(11787221-11787263)
chr8 (398-440)||(16432086-16432128)
chr8 (398-440)||(94469-94511)
chr8 (398-440)||(2792849-2792891)
chr8 (398-440)||(8265338-8265380)
chr8 (398-440)||(11875956-11875998)
chr8 (398-440)||(11890963-11891005)
chr8 (398-440)||(13647415-13647457)
chr8 (398-440)||(13747840-13747882)
chr8 (398-440)||(14876560-14876602)
chr8 (398-440)||(16449195-16449237)
chr8 (398-440)||(34413132-34413174)
chr8 (398-440)||(43856340-43856382)
chr8 (399-440)||(4654068-4654109)
chr8 (398-439)||(6511474-6511515)
chr8 (398-438)||(11289381-11289421)
chr8 (400-440)||(29716930-29716970)
chr8 (404-440)||(30925329-30925365)
chr8 (398-438)||(43656108-43656148)
[»] chr7 (17 HSPs)
chr7 (398-440)||(15238959-15239001)
chr7 (398-440)||(32856875-32856917)
chr7 (398-440)||(3766881-3766923)
chr7 (398-440)||(11745257-11745299)
chr7 (398-440)||(12772185-12772227)
chr7 (398-440)||(13720840-13720882)
chr7 (398-440)||(19331458-19331500)
chr7 (398-440)||(31727750-31727792)
chr7 (398-440)||(33996839-33996881)
chr7 (398-440)||(36469663-36469705)
chr7 (398-440)||(38889451-38889493)
chr7 (398-440)||(42931788-42931830)
chr7 (398-440)||(44616672-44616714)
chr7 (398-440)||(48119540-48119582)
chr7 (398-440)||(48719869-48719911)
chr7 (399-440)||(14204342-14204383)
chr7 (398-438)||(5804927-5804967)
[»] chr6 (11 HSPs)
chr6 (398-440)||(9888483-9888525)
chr6 (398-440)||(10913037-10913079)
chr6 (398-440)||(28222932-28222974)
chr6 (398-440)||(34432755-34432797)
chr6 (399-440)||(7418348-7418389)
chr6 (398-440)||(3640584-3640626)
chr6 (398-440)||(3795732-3795774)
chr6 (398-440)||(6210124-6210166)
chr6 (398-440)||(22574940-22574982)
chr6 (398-440)||(26347474-26347516)
chr6 (398-440)||(32166439-32166481)
[»] chr5 (9 HSPs)
chr5 (398-440)||(13958452-13958494)
chr5 (398-440)||(17545130-17545172)
chr5 (398-436)||(8750860-8750898)
chr5 (398-436)||(10241370-10241408)
chr5 (398-440)||(28308304-28308346)
chr5 (398-440)||(29045939-29045981)
chr5 (398-440)||(36124469-36124511)
chr5 (398-440)||(42317463-42317505)
chr5 (398-438)||(5900363-5900403)
[»] chr3 (11 HSPs)
chr3 (398-440)||(15975366-15975408)
chr3 (398-440)||(44764528-44764570)
chr3 (398-440)||(6488194-6488236)
chr3 (398-440)||(10349470-10349512)
chr3 (398-440)||(17218558-17218600)
chr3 (398-440)||(22501889-22501931)
chr3 (398-440)||(25938888-25938930)
chr3 (398-440)||(33606898-33606940)
chr3 (398-440)||(38819282-38819324)
chr3 (398-436)||(52575536-52575574)
chr3 (398-440)||(52945964-52946006)
[»] scaffold0121 (1 HSPs)
scaffold0121 (405-440)||(2465-2500)
[»] scaffold0445 (1 HSPs)
scaffold0445 (398-440)||(3972-4014)
[»] scaffold0179 (1 HSPs)
scaffold0179 (398-440)||(6047-6089)
[»] scaffold0079 (1 HSPs)
scaffold0079 (398-440)||(50802-50844)
[»] chr4 (17 HSPs)
chr4 (398-440)||(626940-626982)
chr4 (398-440)||(1457976-1458018)
chr4 (398-440)||(3763966-3764008)
chr4 (398-440)||(4958514-4958556)
chr4 (398-440)||(15064160-15064202)
chr4 (398-440)||(15603998-15604040)
chr4 (398-440)||(16342017-16342059)
chr4 (398-440)||(25726267-25726309)
chr4 (398-440)||(33107426-33107468)
chr4 (398-440)||(33530863-33530905)
chr4 (398-440)||(42334022-42334064)
chr4 (398-440)||(43978077-43978119)
chr4 (398-440)||(47890765-47890807)
chr4 (398-440)||(47934030-47934072)
chr4 (398-440)||(48569134-48569176)
chr4 (398-440)||(51511967-51512009)
chr4 (398-440)||(53572285-53572327)


Alignment Details
Target: chr1 (Bit Score: 79; Significance: 9e-37; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 9813541 - 9813631
Alignment:
Q  20 ataggacatcgaaagtttgcctattcttaaaaacacaagcattaatctaaattgaacttttctgcatacctgctagcatcacaagagctaa 110  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  9813541 ataggacatcgaaagtttgcgtattcttaaaaacacaagcattaatctaaatgtaacttttctgcatacctgctagcatcacaagagctaa 9813631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 48897075 - 48897117
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  48897075 tagtggttagagctcacacaattaaattatggagaagtggagt 48897117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 35283613 - 35283571
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  35283613 tagtggttagagctcacacaattaaattgtggagaagtggagt 35283571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 9828363 - 9828422
Alignment:
Q  53 cacaagcattaatctaaattgaacttttctgcatacctgctagcatcacaagagctaaat 112  Q
    ||||||||||||| ||| |  ||||||||||||||||||  ||||||| |||||||||||    
T  9828363 cacaagcattaatataattgtaacttttctgcatacctgtcagcatcaaaagagctaaat 9828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 440
Target Start/End: Complemental strand, 44019385 - 44019346
Alignment:
Q  401 tggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  44019385 tggttagagctcacacaattaaattgtggagaagtggagt 44019346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 3560339 - 3560381
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  3560339 tagtggctagagctcacacaattaaattgtggagaagtggagt 3560381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 6462994 - 6463036
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||    
T  6462994 tagtggctagagttcacataattaaattgtggagaagtggagt 6463036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 7166185 - 7166227
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  7166185 tagtggctagagctcacacaattaaattgtggagaagtggagt 7166227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 11215113 - 11215071
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  11215113 tagtggctagagctcacacaattaaattgtggagaagtggagt 11215071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 16526135 - 16526177
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  16526135 tagtggttagagctcacacaatttaattgtggagaagtggagt 16526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 18467156 - 18467198
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  18467156 tagtggctagagctcacacaattaaattgtggagaagtggagt 18467198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 19011467 - 19011425
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  19011467 tagtggctagagctcacacaattaaattgtggagaagtggagt 19011425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 22563498 - 22563456
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  22563498 tagtggctagagctcacacaattaaattgtggagaagtggagt 22563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 32589447 - 32589489
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  32589447 tagtggttagagctcacacaatttaattgtggagaagtggagt 32589489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 36726673 - 36726631
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  36726673 tagtggttagagctcacacaatttaattgtggagaagtggagt 36726631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 45333670 - 45333712
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  45333670 tagtggctagagctcacacaattaaattgtggagaagtggagt 45333712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 45517226 - 45517268
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  45517226 tagtggctagagctcacacaattaaattgtggagaagtggagt 45517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 46965852 - 46965810
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  46965852 tagtggctagagctcacacaatttaattatggagaagtggagt 46965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 52369709 - 52369667
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  52369709 tagtggctagagctcacacaatttaattatggagaagtggagt 52369667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Complemental strand, 28502689 - 28502657
Alignment:
Q  408 agctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||| |||||||||||||||||||    
T  28502689 agctcacataatttaattatggagaagtggagt 28502657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 51050302 - 51050262
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgga 438  Q
    |||||| ||||||||||| ||||||||| ||||||||||||    
T  51050302 tagtggctagagctcacacaattaaattgtggagaagtgga 51050262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 17601192 - 17601149
Alignment:
Q  397 gtagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  17601192 gtagtggttagagctcacataattaaattgtggagaagtggagt 17601149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 5613066 - 5613027
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgg 437  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  5613066 tagtggttagagctcacacaattaaattgtggagaagtgg 5613027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 440
Target Start/End: Original strand, 13292965 - 13293004
Alignment:
Q  401 tggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  13292965 tggttagagctcacataatttaattatagagaagtggagt 13293004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 21438947 - 21438904
Alignment:
Q  397 gtagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||    
T  21438947 gtagtgattagagctcacacaattaaattgtggagaagtggagt 21438904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 13773512 - 13773470
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  13773512 tagtggttagagctcacacaatttaattgtggagaagtggagt 13773470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 17034847 - 17034805
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||||||||||||||| |||| ||||||||||||||    
T  17034847 tagtggctagagctcacataatttaattgtggagaagtggagt 17034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 17089355 - 17089313
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||||||||||||||| |||| ||||||||||||||    
T  17089355 tagtggctagagctcacataatttaattgtggagaagtggagt 17089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 27913428 - 27913470
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||    
T  27913428 tagtggttagagcttacacaattaaattgtggagaagtggagt 27913470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 34355833 - 34355791
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||| | ||||||||| ||||||||||||||    
T  34355833 tagtggttagagctcatacaattaaattgtggagaagtggagt 34355791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 36182754 - 36182712
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  36182754 tagtggttagagctcacacaatttaattgtggagaagtggagt 36182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 41566874 - 41566832
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  41566874 tagtggctagagctcacacaattaaattgtggagaagtggagt 41566832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 43936813 - 43936771
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  43936813 tagtggttagagctcacacaatttaattgtggagaagtggagt 43936771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 44857192 - 44857234
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||    
T  44857192 tagtggctagagcttacacaattaaattatggagaagtggagt 44857234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 30390327 - 30390364
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagt 435  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  30390327 tagtggttagagctcacacaattaaattgtggagaagt 30390364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 32609146 - 32609187
Alignment:
Q  399 agtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||| |||||||||| |||| ||||||||||||||    
T  32609146 agtggttagagatcacataatttaattgtggagaagtggagt 32609187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 22574418 - 22574382
Alignment:
Q  401 tggttagagctcacataattaaattatggagaagtgg 437  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  22574418 tggttagagctcacacaatttaattatggagaagtgg 22574382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 27082426 - 27082390
Alignment:
Q  404 ttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  27082426 ttagagctcacacaattaaattgtggagaagtggagt 27082390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 1372 - 1330
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  1372 tagtggctagagctcacataattaaattgtggagaagtggagt 1330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 23472 - 23430
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  23472 tagtggttagagctcacacaatttaattatggagaagtggagt 23430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 11787263 - 11787221
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  11787263 tagtggttagagctcacataatttaattgtggagaagtggagt 11787221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 16432086 - 16432128
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  16432086 tagtggctagagctcacacaattaaattatggagaagtggagt 16432128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 94469 - 94511
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  94469 tagtggttagagctcacacaatttaattgtggagaagtggagt 94511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 2792891 - 2792849
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||    
T  2792891 tagtggttggagctcacacaattaaattgtggagaagtggagt 2792849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 8265380 - 8265338
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  8265380 tagtggctagagctcacacaattaaattgtggagaagtggagt 8265338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 11875998 - 11875956
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  11875998 tagtggttagagctcacacaatttaattgtggagaagtggagt 11875956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 11891005 - 11890963
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  11891005 tagtggttagagctcacacaatttaattgtggagaagtggagt 11890963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 13647415 - 13647457
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  13647415 tagtggctagagctcacacaattaaattgtggagaagtggagt 13647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 13747840 - 13747882
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  13747840 tagtggctagagctcacacaattaaattgtggagaagtggagt 13747882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 14876560 - 14876602
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  14876560 tagtggttagagctcacacaattatattgtggagaagtggagt 14876602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 16449237 - 16449195
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  16449237 tagtggctagagctcacacaattaaattgtggagaagtggagt 16449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 34413174 - 34413132
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  34413174 tagtggttagagctcacacaatttaattgtggagaagtggagt 34413132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 43856340 - 43856382
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  43856340 tagtggttagagctctcacaattaaattgtggagaagtggagt 43856382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 4654068 - 4654109
Alignment:
Q  399 agtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||    
T  4654068 agtggctagagctcacacaattaaattgtggagaagtggagt 4654109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 6511474 - 6511515
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggag 439  Q
    |||||||||||||||||| ||||||||| || ||||||||||    
T  6511474 tagtggttagagctcacacaattaaattgtgaagaagtggag 6511515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 11289381 - 11289421
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgga 438  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  11289381 tagtggttagagctgacataatttaattgtggagaagtgga 11289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 29716970 - 29716930
Alignment:
Q  400 gtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||| |||| |||| ||||||||||||||    
T  29716970 gtggttagagctcacacaatttaattgtggagaagtggagt 29716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 30925329 - 30925365
Alignment:
Q  404 ttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  30925329 ttagagctcacataatttaattgtggagaagtggagt 30925365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 43656148 - 43656108
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgga 438  Q
    |||||| ||||||||||| ||||||||| ||||||||||||    
T  43656148 tagtggctagagctcacacaattaaattgtggagaagtgga 43656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 15239001 - 15238959
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  15239001 tagtggctagagctcacacaattaaattatggagaagtggagt 15238959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 32856875 - 32856917
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  32856875 tagtggctagagctcacataattaaattgtggagaagtggagt 32856917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 3766923 - 3766881
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  3766923 tagtggttagagctcacacaatttaattgtggagaagtggagt 3766881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 11745299 - 11745257
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||    
T  11745299 tagtggttagagctcacataatttaattgtggagaagtagagt 11745257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 12772227 - 12772185
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  12772227 tagtggctagagctcacacaatttaattatggagaagtggagt 12772185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 13720882 - 13720840
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  13720882 tagtggctagagctcacacaattaaattttggagaagtggagt 13720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 19331458 - 19331500
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  19331458 tagtggctagagctcacacaattaaattgtggagaagtggagt 19331500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 31727750 - 31727792
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||    
T  31727750 tagtggtttgagctcacacaattaaattgtggagaagtggagt 31727792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 33996839 - 33996881
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  33996839 tagtggctagagctcacacaatttaattatggagaagtggagt 33996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 36469663 - 36469705
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||    
T  36469663 tagtggctagcgctcacacaattaaattatggagaagtggagt 36469705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 38889451 - 38889493
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  38889451 tagtggatagagctcacacaattaaattgtggagaagtggagt 38889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 42931788 - 42931830
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||| |||||||||||||||||||||||||| ||||    
T  42931788 tagtggctagaactcacataattaaattatggagaagttgagt 42931830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 44616714 - 44616672
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  44616714 tagtggttagagctcacacaatttaattgtggagaagtggagt 44616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 48119582 - 48119540
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  48119582 tagtggctagagctcacacaattaaattgtggagaagtggagt 48119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 48719911 - 48719869
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  48719911 tagtggctagagctcacacaattaaattgtggagaagtggagt 48719869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 14204383 - 14204342
Alignment:
Q  399 agtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||| |||| ||||||||| ||||||||||||||    
T  14204383 agtggttagagcccacacaattaaattgtggagaagtggagt 14204342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 5804967 - 5804927
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgga 438  Q
    |||||| ||||||||||| ||||||||| ||||||||||||    
T  5804967 tagtggctagagctcacacaattaaattgtggagaagtgga 5804927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 9888483 - 9888525
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  9888483 tagtggttagagctcacataatttaattgtggagaagtggagt 9888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 10913037 - 10913079
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  10913037 tagtggctagagctcacacaattaaattatggagaagtggagt 10913079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 28222974 - 28222932
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  28222974 tagtggttagagctcacacaatttaattatggagaagtggagt 28222932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 34432755 - 34432797
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  34432755 tagtggttagagttcacataattaaattgtggagaagtggagt 34432797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 7418389 - 7418348
Alignment:
Q  399 agtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  7418389 agtggctagagctcacacaattaaattatggagaagtggagt 7418348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 3640626 - 3640584
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  3640626 tagtggctagagctcacacaattaaattgtggagaagtggagt 3640584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 3795732 - 3795774
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  3795732 tagtggctagagctcacacaattaaattgtggagaagtggagt 3795774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 6210166 - 6210124
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||    
T  6210166 tagtggttagaactcacacaattaaattgtggagaagtggagt 6210124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 22574982 - 22574940
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  22574982 tagtggttagagctcacacaatttaattgtggagaagtggagt 22574940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 26347516 - 26347474
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  26347516 tagtggctagagctcacacaattaaattgtggagaagtggagt 26347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 32166481 - 32166439
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  32166481 tagtggctagagctcacacaattaaattgtggagaagtggagt 32166439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 13958494 - 13958452
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  13958494 tagtggctagagctcacacaattaaattatggagaagtggagt 13958452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 17545130 - 17545172
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  17545130 tagtggctagagctcacacaattaaattatggagaagtggagt 17545172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 8750860 - 8750898
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtg 436  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  8750860 tagtggttagagctctcataattaaattgtggagaagtg 8750898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 10241408 - 10241370
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtg 436  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  10241408 tagtggctagagctcacacaattaaattatggagaagtg 10241370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 28308346 - 28308304
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||||||||||| |||||||||||    
T  28308346 tagtggctagagctcacacaattaaattatgcagaagtggagt 28308304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 29045981 - 29045939
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||    
T  29045981 tagtggttagagctcacacaattaaattgtggagaagtcgagt 29045939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 36124511 - 36124469
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| | ||||||| ||||||||||||||    
T  36124511 tagtggttagagctcacacagttaaattgtggagaagtggagt 36124469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 42317505 - 42317463
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||||||||||||||| |||| ||||||||||||||    
T  42317505 tagtggctagagctcacataatttaattgtggagaagtggagt 42317463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 5900403 - 5900363
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtgga 438  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  5900403 tagtagttagagctcacacaattaaattgtggagaagtgga 5900363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 15975366 - 15975408
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  15975366 tagtggttagagctcacacaatttaattatggagaagtggagt 15975408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 44764528 - 44764570
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  44764528 tagtggctagagctcacacaattaaattatggagaagtggagt 44764570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 6488236 - 6488194
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  6488236 tagtggctagagctcacacaattaaattgtggagaagtggagt 6488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 10349512 - 10349470
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  10349512 tagtggttagagctcacacaatttaattgtggagaagtggagt 10349470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 17218600 - 17218558
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  17218600 tagtggctagagctcacacaattaaattgtggagaagtggagt 17218558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 22501889 - 22501931
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  22501889 tagtggctagagctcacacaattaaattgtggagaagtggagt 22501931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 25938888 - 25938930
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| | ||||||||||||||||||||||    
T  25938888 tagtggctagagctcacacagttaaattatggagaagtggagt 25938930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 33606898 - 33606940
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  33606898 tagtggctagagctcacacaattaaattgtggagaagtggagt 33606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 38819282 - 38819324
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  38819282 tagtggctagagctcacacaattaaattgtggagaagtggagt 38819324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 52575574 - 52575536
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtg 436  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  52575574 tagtggttagagctcacataatttaattgtggagaagtg 52575536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 52946006 - 52945964
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||| | ||||||||| ||||||||||||||    
T  52946006 tagtggttagagctcatacaattaaattgtggagaagtggagt 52945964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 2465 - 2500
Alignment:
Q  405 tagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||| |||||||||||||||||||    
T  2465 tagagctcacataatttaattatggagaagtggagt 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 3972 - 4014
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  3972 tagtggctagagctcacacaattaaattgtggagaagtggagt 4014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 6089 - 6047
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||| || |||||||||||    
T  6089 tagtggttagagctcacacaattaaattgtgaagaagtggagt 6047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 50802 - 50844
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  50802 tagtggttagagctcacacaattaaattgtggagaaatggagt 50844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000004; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 626940 - 626982
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  626940 tagtggttagagctcacacaatttaattgtggagaagtggagt 626982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 1457976 - 1458018
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  1457976 tagtggttagagctcacacaatttaattgtggagaagtggagt 1458018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 3763966 - 3764008
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  3763966 tagtggctagagctcacacaattaaattgtggagaagtggagt 3764008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 4958514 - 4958556
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||    
T  4958514 tagtggttaaagctcacataatttaattgtggagaagtggagt 4958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 15064160 - 15064202
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  15064160 tagtggctagagctcacacaatttaattatggagaagtggagt 15064202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 15603998 - 15604040
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||| |||||||||||||||| ||||||||||||||    
T  15603998 tagtggctagaactcacataattaaattgtggagaagtggagt 15604040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 16342059 - 16342017
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  16342059 tagtggttagagctcacacaattaaattgtggagaaatggagt 16342017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 25726267 - 25726309
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  25726267 tagtggttagagctcgcacaattaaattgtggagaagtggagt 25726309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 33107468 - 33107426
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  33107468 tagtggttagagctcgcacaattaaattgtggagaagtggagt 33107426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 33530905 - 33530863
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  33530905 tagtggctagagctcacacaattcaattatggagaagtggagt 33530863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 42334022 - 42334064
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  42334022 tagtggctagagctcacacaatttaattatggagaagtggagt 42334064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 43978119 - 43978077
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||| | ||||||||| ||||||||||||||    
T  43978119 tagtggttagagctcatacaattaaattgtggagaagtggagt 43978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 47890807 - 47890765
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  47890807 tagtggttagagctcacacaatttaattgtggagaagtggagt 47890765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 47934030 - 47934072
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  47934030 tagtggctagagctcacacaattaaattgtggagaagtggagt 47934072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 48569134 - 48569176
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  48569134 tagtggctagagctcacacaattaaattgtggagaagtggagt 48569176  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 51511967 - 51512009
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||| |||||||||||||||| |||| ||||||||||||||    
T  51511967 tagtggctagagctcacataatttaattgtggagaagtggagt 51512009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 53572285 - 53572327
Alignment:
Q  398 tagtggttagagctcacataattaaattatggagaagtggagt 440  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||    
T  53572285 tagtggttagcgctcacacaattaaattgtggagaagtggagt 53572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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