View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6082_high_8 (Length: 452)

Name: NF6082_high_8
Description: NF6082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6082_high_8
NF6082_high_8
[»] chr4 (61 HSPs)
chr4 (1-438)||(3700351-3700792)
chr4 (279-435)||(25483325-25483490)
chr4 (283-412)||(54343014-54343145)
chr4 (279-439)||(1731649-1731818)
chr4 (279-434)||(36608663-36608827)
chr4 (279-427)||(54017597-54017754)
chr4 (281-434)||(10245910-10246071)
chr4 (279-434)||(22183266-22183430)
chr4 (279-434)||(50002416-50002580)
chr4 (279-431)||(36629230-36629391)
chr4 (279-434)||(36572009-36572173)
chr4 (283-431)||(2740693-2740848)
chr4 (279-435)||(4390103-4390268)
chr4 (307-435)||(4955347-4955484)
chr4 (282-434)||(22027966-22028127)
chr4 (267-431)||(39792850-39793023)
chr4 (288-431)||(3244462-3244614)
chr4 (352-434)||(3341118-3341201)
chr4 (279-434)||(39404388-39404552)
chr4 (352-434)||(52884877-52884960)
chr4 (279-429)||(3340802-3340961)
chr4 (279-421)||(55933126-55933277)
chr4 (279-412)||(44620365-44620507)
chr4 (279-436)||(50459709-50459875)
chr4 (359-434)||(45489421-45489497)
chr4 (288-431)||(52884688-52884841)
chr4 (352-431)||(54741261-54741341)
chr4 (292-354)||(15841383-15841445)
chr4 (352-432)||(41707547-41707628)
chr4 (281-426)||(49302902-49303058)
chr4 (279-412)||(50630757-50630899)
chr4 (352-431)||(10246340-10246420)
chr4 (315-435)||(34646687-34646816)
chr4 (355-434)||(49076534-49076614)
chr4 (279-354)||(23817683-23817758)
chr4 (352-430)||(44620654-44620733)
chr4 (282-357)||(54936272-54936346)
chr4 (279-421)||(39404021-39404172)
chr4 (279-421)||(41370360-41370511)
chr4 (279-341)||(43174233-43174295)
chr4 (279-409)||(44621017-44621156)
chr4 (352-409)||(54108928-54108986)
chr4 (352-431)||(28034222-28034302)
chr4 (282-354)||(32941128-32941200)
chr4 (352-411)||(54017785-54017845)
chr4 (306-409)||(45496820-45496932)
chr4 (325-431)||(2741064-2741179)
chr4 (279-357)||(18932751-18932829)
chr4 (282-412)||(20825848-20825987)
chr4 (352-421)||(49880163-49880233)
chr4 (252-349)||(18879890-18879987)
chr4 (315-434)||(16888854-16888983)
chr4 (311-370)||(41707275-41707334)
chr4 (174-249)||(41921939-41922014)
chr4 (373-412)||(50788088-50788127)
chr4 (359-412)||(44620308-44620362)
chr4 (373-438)||(19504691-19504756)
chr4 (352-412)||(20826229-20826290)
chr4 (352-435)||(11348411-11348495)
chr4 (389-437)||(11706642-11706690)
chr4 (356-434)||(43174496-43174576)
[»] chr8 (59 HSPs)
chr8 (252-432)||(5420643-5420832)
chr8 (279-435)||(3038294-3038459)
chr8 (279-434)||(9309345-9309508)
chr8 (352-434)||(147441-147524)
chr8 (277-412)||(18371663-18371802)
chr8 (277-421)||(3670063-3670216)
chr8 (283-434)||(34834866-34835026)
chr8 (298-412)||(70297-70420)
chr8 (283-421)||(3669690-3669837)
chr8 (257-434)||(6876844-6877031)
chr8 (348-412)||(25561725-25561790)
chr8 (288-429)||(45122070-45122220)
chr8 (291-434)||(147819-147962)
chr8 (279-411)||(20870577-20870718)
chr8 (352-435)||(25561901-25561985)
chr8 (277-412)||(9482606-9482750)
chr8 (282-421)||(30441084-30441236)
chr8 (277-435)||(30359260-30359427)
chr8 (267-421)||(40518585-40518748)
chr8 (279-412)||(34835221-34835363)
chr8 (282-407)||(45121663-45121797)
chr8 (298-434)||(33113390-33113535)
chr8 (279-355)||(41129066-41129142)
chr8 (352-435)||(43274864-43274948)
chr8 (278-421)||(1013874-1014026)
chr8 (354-412)||(1514002-1514061)
chr8 (279-354)||(5915946-5916021)
chr8 (356-434)||(8794101-8794180)
chr8 (352-434)||(8918849-8918932)
chr8 (284-431)||(20995425-20995566)
chr8 (283-410)||(45122638-45122774)
chr8 (277-399)||(9483189-9483320)
chr8 (353-426)||(18372785-18372859)
chr8 (352-434)||(45122996-45123077)
chr8 (352-412)||(41416256-41416317)
chr8 (352-431)||(9608738-9608818)
chr8 (278-434)||(30359599-30359764)
chr8 (352-431)||(41972151-41972231)
chr8 (352-431)||(9308970-9309052)
chr8 (356-426)||(45121999-45122070)
chr8 (353-426)||(18372342-18372416)
chr8 (279-357)||(40518147-40518225)
chr8 (372-433)||(32640633-32640694)
chr8 (281-434)||(37544496-37544658)
chr8 (352-431)||(4154751-4154831)
chr8 (282-357)||(9507858-9507933)
chr8 (277-412)||(18371996-18372140)
chr8 (360-411)||(20130462-20130513)
chr8 (282-357)||(40579276-40579351)
chr8 (375-421)||(6731907-6731953)
chr8 (352-421)||(40579591-40579661)
chr8 (301-354)||(5274854-5274907)
chr8 (291-348)||(12283957-12284014)
chr8 (356-421)||(18372692-18372757)
chr8 (356-412)||(18373020-18373077)
chr8 (354-421)||(1014332-1014400)
chr8 (279-351)||(8919148-8919220)
chr8 (279-354)||(9620682-9620755)
chr8 (321-357)||(12156704-12156740)
[»] chr7 (57 HSPs)
chr7 (283-434)||(30244260-30244420)
chr7 (288-434)||(7517570-7517725)
chr7 (279-434)||(1085620-1085784)
chr7 (288-434)||(45434626-45434781)
chr7 (283-434)||(30245067-30245223)
chr7 (306-434)||(7554015-7554152)
chr7 (350-434)||(30255329-30255414)
chr7 (279-435)||(34218038-34218203)
chr7 (279-434)||(23381-23545)
chr7 (325-434)||(22566712-22566830)
chr7 (350-434)||(30245484-30245569)
chr7 (288-436)||(45754704-45754860)
chr7 (375-434)||(41910703-41910762)
chr7 (279-412)||(6054572-6054714)
chr7 (279-412)||(11845203-11845345)
chr7 (350-434)||(30244691-30244776)
chr7 (352-435)||(40094859-40094943)
chr7 (283-434)||(22567047-22567206)
chr7 (352-434)||(24177425-24177508)
chr7 (279-434)||(45433231-45433395)
chr7 (279-412)||(14681522-14681662)
chr7 (296-436)||(24838722-24838872)
chr7 (357-433)||(36109007-36109084)
chr7 (279-424)||(37533368-37533522)
chr7 (288-412)||(19122744-19122876)
chr7 (352-435)||(36534869-36534953)
chr7 (352-434)||(47129085-47129168)
chr7 (315-421)||(29157568-29157683)
chr7 (283-433)||(36939741-36939900)
chr7 (352-421)||(37533095-37533165)
chr7 (352-429)||(40230376-40230454)
chr7 (279-332)||(30244453-30244506)
chr7 (283-354)||(30253571-30253638)
chr7 (315-434)||(1085288-1085417)
chr7 (356-435)||(43241484-43241564)
chr7 (352-434)||(118386-118469)
chr7 (352-434)||(16569186-16569269)
chr7 (352-434)||(16596393-16596476)
chr7 (352-434)||(36622950-36623033)
chr7 (282-332)||(30253671-30253721)
chr7 (316-357)||(23569043-23569084)
chr7 (279-332)||(30245256-30245309)
chr7 (374-431)||(40094502-40094559)
chr7 (279-352)||(47129450-47129523)
chr7 (352-431)||(8128526-8128606)
chr7 (370-434)||(9901635-9901698)
chr7 (352-431)||(28301628-28301708)
chr7 (279-355)||(37167859-37167935)
chr7 (291-434)||(41854625-41854776)
chr7 (360-411)||(44361557-44361608)
chr7 (279-345)||(37532755-37532821)
chr7 (284-325)||(7517765-7517806)
chr7 (284-325)||(7518031-7518072)
chr7 (308-353)||(37345998-37346043)
chr7 (285-350)||(45755010-45755075)
chr7 (306-354)||(2512582-2512630)
chr7 (356-435)||(20599303-20599383)
[»] chr1 (47 HSPs)
chr1 (279-434)||(26661526-26661690)
chr1 (279-435)||(31767165-31767330)
chr1 (252-434)||(34364497-34364688)
chr1 (279-437)||(41156978-41157145)
chr1 (288-434)||(37556101-37556256)
chr1 (279-431)||(22077499-22077660)
chr1 (314-432)||(17294569-17294696)
chr1 (288-433)||(37555721-37555874)
chr1 (279-432)||(41157367-41157529)
chr1 (279-421)||(44290828-44290980)
chr1 (279-421)||(44290462-44290613)
chr1 (352-436)||(41184510-41184595)
chr1 (279-428)||(45084378-45084530)
chr1 (252-412)||(3875308-3875477)
chr1 (279-434)||(41142362-41142527)
chr1 (352-422)||(50052108-50052179)
chr1 (277-431)||(24600316-24600479)
chr1 (272-434)||(34364915-34365086)
chr1 (279-409)||(48588492-48588631)
chr1 (279-412)||(3537603-3537745)
chr1 (283-433)||(40082398-40082556)
chr1 (288-432)||(9955899-9956054)
chr1 (279-434)||(37850604-37850768)
chr1 (352-421)||(3537232-3537302)
chr1 (296-434)||(26661919-26662066)
chr1 (279-412)||(14318879-14319021)
chr1 (279-412)||(45493978-45494124)
chr1 (352-435)||(21378126-21378210)
chr1 (279-435)||(29798188-29798353)
chr1 (279-434)||(11977270-11977434)
chr1 (279-434)||(34649428-34649592)
chr1 (315-421)||(3550723-3550838)
chr1 (307-421)||(32594748-32594871)
chr1 (279-421)||(41759486-41759637)
chr1 (356-412)||(5528843-5528900)
chr1 (377-434)||(35154150-35154207)
chr1 (355-418)||(5575110-5575174)
chr1 (279-354)||(22077114-22077189)
chr1 (281-352)||(22793360-22793431)
chr1 (278-432)||(66475-66638)
chr1 (292-434)||(39066217-39066368)
chr1 (176-252)||(35998176-35998252)
chr1 (372-431)||(4878796-4878855)
chr1 (282-357)||(32168705-32168780)
chr1 (290-421)||(38804370-38804510)
chr1 (292-354)||(47380184-47380246)
chr1 (352-432)||(5320050-5320131)
[»] chr3 (58 HSPs)
chr3 (281-434)||(31190007-31190161)
chr3 (283-412)||(39934963-39935101)
chr3 (279-432)||(54017820-54017982)
chr3 (279-434)||(25739429-25739593)
chr3 (279-421)||(37726507-37726650)
chr3 (279-434)||(42342392-42342556)
chr3 (279-436)||(15772842-15773008)
chr3 (279-436)||(35946510-35946676)
chr3 (281-434)||(15773182-15773346)
chr3 (279-435)||(32589693-32589857)
chr3 (279-431)||(33803256-33803417)
chr3 (312-431)||(8327897-8328025)
chr3 (279-434)||(37990643-37990807)
chr3 (279-434)||(37990981-37991145)
chr3 (279-434)||(43346795-43346959)
chr3 (352-436)||(29644987-29645072)
chr3 (292-435)||(52634665-52634816)
chr3 (279-435)||(12114566-12114731)
chr3 (279-434)||(54018202-54018366)
chr3 (282-411)||(22304582-22304720)
chr3 (279-434)||(53117979-53118142)
chr3 (279-434)||(32462904-32463069)
chr3 (352-434)||(29644666-29644749)
chr3 (267-434)||(42342082-42342258)
chr3 (283-432)||(45395661-45395819)
chr3 (370-435)||(53577353-53577418)
chr3 (314-434)||(11661525-11661639)
chr3 (288-435)||(39914241-39914397)
chr3 (279-357)||(22303663-22303741)
chr3 (279-357)||(41359769-41359847)
chr3 (373-439)||(43346635-43346701)
chr3 (352-421)||(51886564-51886634)
chr3 (321-357)||(46546371-46546407)
chr3 (288-434)||(11661941-11662096)
chr3 (356-434)||(25755384-25755463)
chr3 (283-357)||(22303963-22304037)
chr3 (301-431)||(47964544-47964683)
chr3 (356-421)||(50612541-50612607)
chr3 (352-412)||(42584907-42584968)
chr3 (352-436)||(49336772-49336857)
chr3 (356-431)||(21832432-21832508)
chr3 (373-421)||(22304249-22304297)
chr3 (306-354)||(39336001-39336049)
chr3 (356-434)||(45901703-45901783)
chr3 (301-352)||(25317239-25317290)
chr3 (279-357)||(3135458-3135536)
chr3 (352-421)||(39389073-39389143)
chr3 (352-412)||(3135158-3135219)
chr3 (373-434)||(3135568-3135629)
chr3 (356-428)||(7767403-7767476)
chr3 (279-348)||(50612451-50612520)
chr3 (352-431)||(9240142-9240222)
chr3 (392-432)||(12747878-12747918)
chr3 (325-357)||(17731954-17731986)
chr3 (325-357)||(19033185-19033217)
chr3 (360-434)||(32462651-32462727)
chr3 (352-431)||(33175749-33175829)
chr3 (325-357)||(54017598-54017630)
[»] chr2 (50 HSPs)
chr2 (280-427)||(7598606-7598754)
chr2 (281-421)||(36178611-36178760)
chr2 (281-434)||(15880253-15880415)
chr2 (298-434)||(28254262-28254405)
chr2 (279-434)||(6421375-6421539)
chr2 (279-421)||(37106191-37106342)
chr2 (279-431)||(962591-962752)
chr2 (279-435)||(38796622-38796789)
chr2 (279-421)||(5542629-5542780)
chr2 (279-421)||(5543002-5543153)
chr2 (322-434)||(31468797-31468914)
chr2 (355-434)||(38796306-38796386)
chr2 (282-421)||(14745674-14745822)
chr2 (352-434)||(31899511-31899594)
chr2 (279-353)||(6421811-6421885)
chr2 (281-434)||(15511501-15511661)
chr2 (301-432)||(30313170-30313309)
chr2 (279-421)||(37105927-37106078)
chr2 (279-421)||(41283479-41283630)
chr2 (373-434)||(36785670-36785731)
chr2 (279-434)||(40733873-40734036)
chr2 (277-357)||(3672777-3672857)
chr2 (279-429)||(35580728-35580886)
chr2 (279-431)||(42514642-42514803)
chr2 (356-434)||(16542439-16542518)
chr2 (282-437)||(36005887-36006050)
chr2 (283-434)||(40733507-40733667)
chr2 (373-434)||(29676893-29676954)
chr2 (301-354)||(29873563-29873616)
chr2 (356-427)||(1769889-1769961)
chr2 (279-434)||(6712966-6713131)
chr2 (279-427)||(7598225-7598382)
chr2 (352-431)||(28531399-28531479)
chr2 (352-431)||(37632682-37632762)
chr2 (279-354)||(3673147-3673222)
chr2 (282-357)||(6422186-6422261)
chr2 (376-434)||(6421294-6421352)
chr2 (279-345)||(6421714-6421780)
chr2 (279-357)||(23346312-23346390)
chr2 (352-436)||(31259701-31259789)
chr2 (288-436)||(33731634-33731793)
chr2 (351-412)||(40163457-40163519)
chr2 (310-431)||(33561486-33561616)
chr2 (279-431)||(40679633-40679794)
chr2 (325-412)||(14745344-14745440)
chr2 (279-406)||(36178175-36178311)
chr2 (360-437)||(5367442-5367520)
chr2 (389-434)||(3673075-3673120)
chr2 (325-357)||(37895111-37895143)
chr2 (308-352)||(41678401-41678445)
[»] chr5 (42 HSPs)
chr5 (279-438)||(36492221-36492389)
chr5 (279-437)||(15370086-15370253)
chr5 (283-421)||(32487397-32487543)
chr5 (252-435)||(300948-301132)
chr5 (279-432)||(3295349-3295509)
chr5 (279-434)||(40296319-40296483)
chr5 (290-412)||(41170646-41170777)
chr5 (279-434)||(25327925-25328089)
chr5 (288-431)||(26074159-26074311)
chr5 (279-421)||(6500454-6500604)
chr5 (275-421)||(18603120-18603275)
chr5 (288-434)||(26074602-26074757)
chr5 (352-436)||(26075247-26075332)
chr5 (298-429)||(35150002-35150141)
chr5 (323-434)||(11417025-11417143)
chr5 (352-434)||(6224186-6224269)
chr5 (284-431)||(13415769-13415925)
chr5 (325-434)||(299479-299597)
chr5 (283-412)||(38427560-38427697)
chr5 (277-357)||(624272-624352)
chr5 (279-431)||(1028521-1028682)
chr5 (360-435)||(12662745-12662821)
chr5 (279-434)||(42405602-42405764)
chr5 (352-434)||(26074867-26074950)
chr5 (354-434)||(35914839-35914920)
chr5 (282-434)||(3295022-3295184)
chr5 (279-421)||(6500826-6500976)
chr5 (279-421)||(27502040-27502191)
chr5 (278-412)||(34753028-34753171)
chr5 (283-431)||(36568577-36568732)
chr5 (356-432)||(42508604-42508681)
chr5 (352-431)||(41632775-41632855)
chr5 (291-350)||(623901-623960)
chr5 (277-351)||(26590912-26590986)
chr5 (385-434)||(35150737-35150786)
chr5 (385-434)||(35151028-35151077)
chr5 (277-412)||(33747783-33747927)
chr5 (279-357)||(15370478-15370556)
chr5 (307-357)||(36522269-36522319)
chr5 (352-412)||(9498739-9498800)
chr5 (356-432)||(31509615-31509692)
chr5 (306-354)||(36527126-36527174)
[»] chr6 (36 HSPs)
chr6 (290-434)||(1950200-1950353)
chr6 (283-435)||(2579880-2580041)
chr6 (283-431)||(10074371-10074528)
chr6 (279-421)||(29518506-29518657)
chr6 (279-421)||(29518923-29519074)
chr6 (279-421)||(32741182-32741333)
chr6 (279-434)||(2578447-2578610)
chr6 (283-436)||(2377742-2377904)
chr6 (288-421)||(3409262-3409404)
chr6 (279-412)||(5832031-5832172)
chr6 (279-434)||(16454897-16455061)
chr6 (279-421)||(2378129-2378280)
chr6 (279-421)||(35210207-35210358)
chr6 (279-421)||(14748346-14748493)
chr6 (356-435)||(9062438-9062518)
chr6 (288-435)||(16107667-16107823)
chr6 (279-421)||(1846751-1846902)
chr6 (315-421)||(26544052-26544167)
chr6 (356-436)||(593798-593879)
chr6 (315-412)||(3058238-3058344)
chr6 (279-431)||(10073620-10073779)
chr6 (279-431)||(10911558-10911720)
chr6 (279-431)||(10073995-10074156)
chr6 (324-412)||(32460629-32460726)
chr6 (288-355)||(12085047-12085114)
chr6 (352-434)||(16108053-16108136)
chr6 (279-434)||(16454565-16454729)
chr6 (279-421)||(3409663-3409814)
chr6 (279-349)||(12071695-12071765)
chr6 (279-354)||(2843634-2843709)
chr6 (298-412)||(3415470-3415593)
chr6 (373-434)||(2579212-2579273)
chr6 (288-412)||(1127372-1127505)
chr6 (307-431)||(12092514-12092647)
chr6 (352-434)||(6999881-6999964)
chr6 (277-354)||(2579494-2579571)
[»] scaffold0702 (2 HSPs)
scaffold0702 (283-436)||(522-684)
scaffold0702 (355-421)||(230-297)
[»] scaffold0391 (2 HSPs)
scaffold0391 (277-434)||(1108-1274)
scaffold0391 (372-434)||(3091-3153)
[»] scaffold0734 (2 HSPs)
scaffold0734 (352-434)||(5767-5850)
scaffold0734 (352-436)||(5384-5469)
[»] scaffold0078 (2 HSPs)
scaffold0078 (352-432)||(5349-5430)
scaffold0078 (282-435)||(4971-5133)
[»] scaffold0171 (1 HSPs)
scaffold0171 (352-434)||(17541-17624)
[»] scaffold0504 (1 HSPs)
scaffold0504 (352-434)||(10196-10279)


Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 438
Target Start/End: Complemental strand, 3700792 - 3700351
Alignment:
Q  1 acagacaaaccagacccaacctaaaagatgttatacttatttcaagacaaggttaacaactaacatctaccccacatatatgnnnnnnn--gacctatat 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||    
T  3700792 acagacaaaccagacccaacctaaaagatgttatacttatttcaagacaagcttaacaactaacatctaccccacatatatgttcttttttgacctatat 3700693  T
Q  99 gatacaaacttaatccatacatgatggatattttattgttgctgcannnnnnnn-gacttaattcaaacaactacaaagtgtgtgtttgatttcgggatt 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||||    
T  3700692 gatacaaacttaatccatacatgatggatgttttattgttgctgcatttttttttgacttaattcaaacatctacaaagtgtgtgtttgatttcgggatt 3700593  T
Q  198 gcaacacacaaaaatatgtttgcatactttccgatgcgtttttgtcgtgatttttgttaggtcattggaggagttcagagaaccgtccatatcgaggctt 297  Q
    |||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||| |   |||||||| ||||||||||    
T  3700592 gcaacacacaaaaacacgtttgcatactttctgatgcgtgtttgtcgtgatttttgttaggtcactagaggagttcgggagaccgtccacatcgaggctt 3700493  T
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttcaaccttcactcttttatcc 396  Q
    ||| ||| |||||| ||||||| |||||| |||||||  |||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||    
T  3700492 gaataaccacacaaatgagagagacatcatactcttatccaaaaccttaaggcaatgagtccttttacttataaggtgttcaacatttactcttttatcc 3700393  T
Q  397 gatgtgggacatataatccacacttacacacaacaacaattt 438  Q
    ||||| ||||||||||  ||||||| |||||||||| |||||    
T  3700392 gatgtaggacatataactcacacttgcacacaacaataattt 3700351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 279 - 435
Target Start/End: Complemental strand, 25483490 - 25483325
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        |||||||||||||    
T  25483490 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttata 25483391  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     ||||||||||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||||||    
T  25483390 agatgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaa 25483325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 54343014 - 54343145
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat-gggtcctcttacttat-agatgttcaac 380  Q
    |||| ||||||||| ||||||| || ||||  ||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||||    
T  54343014 tccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaaggcaatggggtcctcttacttataaggtgttcaac 54343113  T
Q  381 cttcactcttttatccgatgtgggacatataa 412  Q
    ||| ||| ||||||||||||||||||||||||    
T  54343114 ctttactattttatccgatgtgggacatataa 54343145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 439
Target Start/End: Original strand, 1731649 - 1731818
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| || |||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        ||||||||||| |||||    
T  1731649 accgtccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttata 1731748  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatttg 439  Q
     ||||||||||||| ||| ||||||| ||||||||||||||||  |||| || |||||||||||||||||    
T  1731749 agatgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaacaacaatttg 1731818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 36608663 - 36608827
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||| |||||||||||| ||        |||| |||||||||||||     
T  36608663 accgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatg 36608762  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || |||||||| || ||||||||||||||||| ||||||||||  ||||||| ||||||||||||    
T  36608763 aggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 427
Target Start/End: Original strand, 54017597 - 54017754
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||| ||| |||  ||||| |||||||||||||||  ||||||||||||||        ||||||||||||||||||     
T  54017597 accgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttata 54017696  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 427  Q
    |||||||||||||| ||| ||||||| || |||||||||||||  ||||||| |||||    
T  54017697 agatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 10246071 - 10245910
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata-ga 372  Q
    |||||| ||||||||| ||||||| | |||||  || || ||| ||||||||||| ||||||||||||||  |||||       ||||||||||||| |     
T  10246071 cgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaaggctttgggtttatggtcctcttacttataagg 10245972  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||| |||||||||||||||||||| |||||||  ||||||| ||||||||||||    
T  10245971 tgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 22183266 - 22183430
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||   |||||||||||| ||  ||||||||||  |||||||||||||||||||||        ||| |||||||||    
T  22183266 accgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttata 22183365  T
Q  371 gat-gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     || ||||||| || ||||||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  22183366 aattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 50002580 - 50002416
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    |||| ||| ||||||||| |||||||  ||||||| ||||| ||| ||||||||||| |||||||||||| ||||||        ||||||||||||| |    
T  50002580 accgcccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaa 50002481  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| |||||||||||||||||| |||||||||  ||||||| || |||||||||    
T  50002480 aagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 36629391 - 36629230
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  36629391 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 36629292  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || |||| ||| || ||| || |||||||||||||||||||||  |||||||  ||||||||    
T  36629291 aggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 36572173 - 36572009
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    ||||| || |||||||||||||||||  |||||| |||||| ||| || ||||| || |||||||||||||||||||        ||| |||||||||||    
T  36572173 accgttcacatcgaggcttgaacaaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttata 36572074  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||||||| || |||||||||| |||||||||||||||||  |||||||  |||||||||||    
T  36572073 aggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 431
Target Start/End: Complemental strand, 2740848 - 2740693
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 373  Q
    |||||||||||||| |||||||  ||||||||||||| ||  |||||||||||  |||||||||||||  |||||        ||||||||||||| | |    
T  2740848 tccatatcgaggctagaacaac--cacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggt 2740751  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||||||| ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  2740750 gttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 4390103 - 4390268
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 370  Q
    |||||||  ||||||||| |||||||  ||||||  ||||| || |||||||||||| ||||||||||| |||||| |        ||||||||||||||    
T  4390103 accgtccgcatcgaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttata 4390202  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     | ||||||||||| ||||||||||| ||||||||| || |||  ||||||| |||||||||||||    
T  4390203 aggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaacaa 4390268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 435
Target Start/End: Original strand, 4955347 - 4955484
Alignment:
Q  307 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccg 397  Q
    ||||||| ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| |||||||||    
T  4955347 cacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccg 4955446  T
Q  398 atgtgggacatataatccacacttacacacaacaacaa 435  Q
    || || |||||||||  ||||||| |||||||||||||    
T  4955447 atatgagacatataactcacacttgcacacaacaacaa 4955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 434
Target Start/End: Original strand, 22027966 - 22028127
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata-ga 372  Q
    ||||| |||||| ||  |||||| ||| ||| |||||| ||| |||| |||||| |||||||||||||||||        ||||||||||||||||| |     
T  22027966 gtccacatcgagactaaaacaaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataagg 22028065  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||   | ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  22028066 tgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 267 - 431
Target Start/End: Original strand, 39792850 - 39793023
Alignment:
Q  267 ggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtc 358  Q
    |||| |||||| |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        || ||    
T  39792850 ggagctcagaggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttc 39792949  T
Q  359 ctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||| ||||| || |||||||| || ||| || |||| ||||||||||||||||  |||||||  ||||||||    
T  39792950 ctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 431
Target Start/End: Original strand, 3244462 - 3244614
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 378  Q
    ||||||||| ||||||| | |||||||||||| ||  |||| |||||| |||||| ||||| |||||        |||||||||||||||| ||||||||    
T  3244462 atcgaggctggaacaaccatacaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttca 3244561  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||| ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  3244562 acctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 3341201 - 3341118
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  3341201 atgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 39404552 - 39404388
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    ||||| || ||||||||| ||||||| |||||||  ||||| ||| |||| |||| | |||||||||||||| ||        |||||||||||||||||    
T  39404552 accgttcacatcgaggctagaacaaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttata 39404453  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||| ||||| ||||||||||| ||||||||||||||||  |||||||  |||||||||||    
T  39404452 aggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 52884960 - 52884877
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  52884960 atggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 429
Target Start/End: Complemental strand, 3340961 - 3340802
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||| | ||| ||||||||||| |||||||||||||||        |||||||||||||||||||    
T  3340961 accgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttata 3340862  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 429  Q
     | || |||||||| ||||||| ||| |||| |||||||||||  ||||||| |||||||    
T  3340861 aggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 55933126 - 55933277
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||   |||||| ||||| ||| ||||||||||| |||||| ||||||||        ||||||||||||||||||     
T  55933126 accgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttata 55933225  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || ||||||||| | ||| ||||||||||||| ||||||||||  |||||||    
T  55933226 aggtgttcaacccttactattttatccgatgtaggacatataactcacactt 55933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 44620507 - 44620365
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat- 369  Q
    |||||||| ||| ||| | ||||||| |||||||  ||||| ||||||||||||||| |||||||||||||||||||||         |||||| ||||     
T  44620507 accgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttata 44620408  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || ||||||||||| ||| ||||||||||||||| ||||||||    
T  44620407 aggtgttcaacctttactgttttatccgatgtggaacatataa 44620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 50459875 - 50459709
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    ||||| || ||||||||| ||||||| |||||||  ||||| ||| ||| |||||||  |||||||||||  |||||||        |||||||||||||    
T  50459875 accgtgcacatcgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttata 50459776  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
     ||||||||||||| ||||||||| ||||||||| ||||||||  ||||||||  ||| ||||||||    
T  50459775 agatgttcaacctttactcttttaaccgatgtggaacatataactcacacttatgcactacaacaat 50459709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 45489421 - 45489497
Alignment:
Q  359 ctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||| | ||||||||||| |||||||||||||||||| |||||||||| |||||||  |||||||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaaca 45489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 431
Target Start/End: Complemental strand, 52884841 - 52884688
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacac-aaaaccttaaggcaatgggt--------cctcttacttata-gatgttc 377  Q
    ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| | ||||||||||||||||||||        | ||||||||||| | |||||    
T  52884841 atcgaggctagatcaaccgcacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttc 52884742  T
Q  378 aaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||| ||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  52884741 aacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 54741261 - 54741341
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||||||| | ||||||||||| ||| || ||||||||||| |||||||||| ||||||| |||||||||    
T  54741261 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 15841383 - 15841445
Alignment:
Q  292 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    ||||| || |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  15841383 aggctagagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatg 15841445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 41707547 - 41707628
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    |||||| || ||||||||| | ||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||    
T  41707547 atgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 426
Target Start/End: Complemental strand, 49303058 - 49302902
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-- 370  Q
    |||||| ||||||| | ||||||   || |||| ||||| ||| ||||||||||| |||||||||||||||||||||        |||||||||| ||      
T  49303058 cgtccacatcgaggatagaacaatcgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttata 49302959  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 426  Q
     ||||||||||||| ||| ||||||  ||||||||||||||||  ||||||||||||    
T  49302958 agatgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 50630757 - 50630899
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||| ||| |||||||||  ||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  50630757 accgcccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 50630856  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |  ||||||||||| ||| ||||||||||||| ||||||||||    
T  50630857 atgtgttcaacctttactattttatccgatgtaggacatataa 50630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 10246420 - 10246340
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||| || |||||||||   |||||| |||||||||    
T  10246420 atgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 435
Target Start/End: Original strand, 34646687 - 34646816
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||| ||||||||||| |||||||||||||||||| ||        ||||||| ||||| | |||||||| || ||| |||||||||||||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtggga 34646786  T
Q  406 catataatccacacttacacacaacaacaa 435  Q
    |||||||  |||||||  ||||||||||||    
T  34646787 catataactcacacttgtacacaacaacaa 34646816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 49076534 - 49076614
Alignment:
Q  355 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||||||| | ||||||||||| ||| ||||||||||| ||| ||||||||  ||||||| ||||||||||||    
T  49076534 ggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaacaaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 23817683 - 23817758
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| ||||||||| ||||||| |||| ||  ||||| ||| ||||||||||| ||||||||||||||||||    
T  23817683 accgtccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggcaatg 23817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 430
Target Start/End: Complemental strand, 44620733 - 44620654
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaac 430  Q
    ||||||||||||||||||| | ||||||||||  ||| ||| ||||||||||||||||||||  ||||||| ||||||||    
T  44620733 atgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 54936346 - 54936272
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| ||||||||| ||||||| ||| | |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  54936346 gtccacatcgaggctagaacaaccacata-gtgagagagacaccacactcttacccaaaaccttaaggcaatgggt 54936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 39404172 - 39404021
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||  ||||||||||| ||||||||||| ||         ||| |||||||||||||||    
T  39404172 accgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttata 39404073  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| |||||||||| | |||| ||||||||||  |||||||    
T  39404072 aagtgttcaacctttactcttttattcaatgtaggacatataactcacactt 39404021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 41370511 - 41370360
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| |||  |||||||||| |||||| ||||||||||        ||||||||||||||||     
T  41370511 accgtccacatcgaggctagaacaaccactcaagcaagagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttata 41370412  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || | |||||| || ||| ||||||||||| ||||||||||||  |||||||    
T  41370411 aggttttcaacatttactattttatccgatttgggacatataactcacactt 41370360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 43174295 - 43174233
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa 341  Q
    |||||||| ||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  43174295 accgtccacatcaaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaa 43174233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 409
Target Start/End: Complemental strand, 44621156 - 44621017
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat- 369  Q
    |||||||| ||||||||| ||| |||  ||||||  ||||| ||| ||||||||||| |||||||||||| ||||| ||        ||||||||||||     
T  44621156 accgtccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttata 44621057  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacata 409  Q
    || ||||||||||| ||| |||||||||||||||| ||||    
T  44621056 aggtgttcaacctttactgttttatccgatgtgggtcata 44621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 54108986 - 54108928
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacata 409  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||    
T  54108986 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 28034302 - 28034222
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||| |||| ||||||| | |||||||||| |||| || ||||||||| |||||||||||| ||||||| |||||||||    
T  28034302 atgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 32941128 - 32941200
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    ||||| ||||||||| |||||||  ||||||  ||||| || |||||||||||| ||||||||||||||||||    
T  32941128 gtccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatg 32941200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 54017785 - 54017845
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatata 411  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||| |||||    
T  54017785 atgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 45496932 - 45496820
Alignment:
Q  306 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatcc 396  Q
    |||||||  ||||| ||| ||||||||||| |||||||||||| |||||        |||||||||||||||| | ||||||||||| ||  ||||||||    
T  45496932 acacaagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatcc 45496833  T
Q  397 gatgtgggacata 409  Q
    |||||||||||||    
T  45496832 gatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 2741179 - 2741064
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 415  Q
    ||||||||||| |||||||||||||||||||        ||||||||||||||| | | ||||||||| ||| || |||| ||||||||||||||||  |    
T  2741179 cacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactc 2741080  T
Q  416 acacttacacacaaca 431  Q
    |||||| |||| ||||    
T  2741079 acacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 18932751 - 18932829
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| || |||||||||  |||||| || ||||| ||||| ||| |||||||||||  ||||||||||||||||||||    
T  18932751 accgtacacatcgaggctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggt 18932829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 412
Target Start/End: Complemental strand, 20825987 - 20825848
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata-ga 372  Q
    ||||| ||| ||||| |||||||  || |||  ||||| ||| ||||||||||| |||||||||||||| |        ||||| |||||| ||||| |     
T  20825987 gtccacatcaaggctagaacaaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataagg 20825888  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20825887 tgttcaacctttactcttttatccgatgtggaacatataa 20825848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 49880233 - 49880163
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||| | |||||||||||||||  |||||||    
T  49880233 atgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacactt 49880163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 349
Target Start/End: Complemental strand, 18879987 - 18879890
Alignment:
Q  252 tgttaggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaagg 349  Q
    |||| ||||||||| |||| || ||| |||||||| ||||| ||| ||||||| ||||||   | ||| || |||||||||||| |||||||||||||    
T  18879987 tgttgggtcattgggggagctcggaggaccgtccacatcgaagctagaacaaccacacaaccaaaagagacgtcacactcttacccaaaaccttaagg 18879890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 16888854 - 16888983
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||||||||||||||| ||||||| |||| |||||        ||| |||||||||||| | | ||||||||| ||| || ||||||||||||||    
T  16888854 agagagacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtggga 16888953  T
Q  406 catataatccacactt-acacacaacaaca 434  Q
    |||||||  |||||||  ||||||||||||    
T  16888954 catataactcacacttgccacacaacaaca 16888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 41707275 - 41707334
Alignment:
Q  311 agtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata 370  Q
    ||||||||| | | |||||| |||| ||||||||||||| |||||||| |||||||||||    
T  41707275 agtgagagagataccacacttttacccaaaaccttaaggtaatgggtcatcttacttata 41707334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 41921939 - 41922014
Alignment:
Q  174 aagtgtgtgtttgatttcgggattgcaacacacaaaaatatgtttgcatactttccgatgcgtttttgtcgtgatt 249  Q
    |||||| |||||||||||    |||||||||||||||| | ||||||| ||||||| |||| |||||| |||||||    
T  41921939 aagtgtatgtttgatttcctctttgcaacacacaaaaacacgtttgcacactttccaatgcatttttgccgtgatt 41922014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 412
Target Start/End: Original strand, 50788088 - 50788127
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  50788088 tgttcaacctttactattttatccgatgtgggacatataa 50788127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 44620362 - 44620308
Alignment:
Q  359 ctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||||||| | ||||||||||| ||| |||||||| |||||||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataa 44620308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 19504756 - 19504691
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaattt 438  Q
    |||||||| || ||| ||||||||||| ||||||||||||  || ||||  |||||||||||||||    
T  19504756 tgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaacaattt 19504691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 20826290 - 20826229
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||| ||||||||||||   |||||||| || ||| ||||||||||||||||||||||||    
T  20826290 atgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataa 20826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 11348411 - 11348495
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    |||| |||||| ||||||| | |||||||||| |||| ||||||| ||||| | ||||||||  |||| || |||||||||||||    
T  11348411 atggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaacaa 11348495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 11706642 - 11706690
Alignment:
Q  389 ttttatccgatgtgggacatataatccacacttacacacaacaacaatt 437  Q
    ||||||||||||||||||||| ||  ||| ||| |||||||||||||||    
T  11706642 ttttatccgatgtgggacatacaactcacccttgcacacaacaacaatt 11706690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 43174576 - 43174496
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||| | ||||||||||| |||||||| ||| |||||| | |||||||  |||||||  |||||||||||    
T  43174576 gtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaacaaca 43174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 432
Target Start/End: Complemental strand, 5420832 - 5420643
Alignment:
Q  252 tgttaggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    |||| ||||| ||| ||||||| | | || ||||| ||||||||||||||||| ||||||||||| || || ||||||||||||| ||||||||||||||    
T  5420832 tgttgggtcagtgggggagttccgcggacggtccacatcgaggcttgaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggca 5420733  T
Q  352 atgg--------gtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    ||||        |||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||| ||||||| || |||||||    
T  5420732 atgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 3038294 - 3038459
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| |   ||||||||||| |||||||||||||||||||||        ||| |||||||||    
T  3038294 accgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttata 3038393  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||  ||||||||||||    
T  3038394 aagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaacaacaa 3038459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 9309508 - 9309345
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| ||| |  ||||||| ||| ||||||||||| | | ||||||||||||||        ||||||||||||||||    
T  9309508 accgtccacatcgaggctagaacaaccacatac-tgagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttata 9309410  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  9309409 aggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 9309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 147524 - 147441
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  147524 atgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 412
Target Start/End: Original strand, 18371663 - 18371802
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca-------atgggtcctcttacttat 369  Q
    |||||||||| ||||| ||| || ||||  ||||| ||||||||||| ||||||||||| |||||||||||||||       ||||||| |||||||||     
T  18371663 gaaccgtccacatcgaagctagagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaaggcatgggtttatgggtcttcttactta- 18371761  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
      |||||||||||| ||| |||||||||||||| |||||||||    
T  18371762 --atgttcaacctttactattttatccgatgtgtgacatataa 18371802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 277 - 421
Target Start/End: Complemental strand, 3670216 - 3670063
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 368  Q
    |||||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |        |||||||||| ||||||    
T  3670216 gaaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatactta 3670117  T
Q  369 t-agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    | || |||| |||||| ||| ||||||||||||||||||||||||  |||||||    
T  3670116 taaggtgttaaacctttactattttatccgatgtgggacatataactcacactt 3670063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 434
Target Start/End: Complemental strand, 34835026 - 34834866
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 373  Q
    |||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| ||| |||||||||| || |    
T  34835026 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggt 34834927  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||| |||||| ||| |||||||| |||||||||||||||  |||||||  |||||||||||    
T  34834926 gtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 70297 - 70420
Alignment:
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaaccttcactc 388  Q
    ||||||| |||||||  ||| | || ||||||||||||  ||||||||||||||        ||||||||||||||||||| |||||||||| || ||||    
T  70297 gaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactc 70396  T
Q  389 ttttatccgatgtgggacatataa 412  Q
    ||||||||||||||||||||||||    
T  70397 ttttatccgatgtgggacatataa 70420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 3669837 - 3669690
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 373  Q
    |||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| |||||||||||||| || |    
T  3669837 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggt 3669738  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    |||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  3669737 gttcaacctttactattttatctgatgtgggacatataactcacactt 3669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 434
Target Start/End: Original strand, 6876844 - 6877031
Alignment:
Q  257 ggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg-- 354  Q
    ||||||||| |||| || | | |||||||| ||||||||| ||||||| ||||||   ||||| ||| ||||||||||| ||||||| |||| |||||      
T  6876844 ggtcattgggggagctcgggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatgag 6876943  T
Q  355 ------ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggac-atataatccacacttacacacaacaaca 434  Q
          |||| ||||| ||||| | ||||||||||| ||| |||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  6876944 tgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 25561725 - 25561790
Alignment:
Q  348 ggcaatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  25561725 ggcaatgggtactcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataa 25561790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 429
Target Start/End: Original strand, 45122070 - 45122220
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 378  Q
    ||||||||| |||||||  ||||||| ||||| ||| ||||||||||| ||||||||||||  ||||        ||| |||||||||||| | ||||||    
T  45122070 atcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttca 45122169  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaa 429  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||| |||||||    
T  45122170 acctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 434
Target Start/End: Complemental strand, 147962 - 147819
Alignment:
Q  291 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaaccttcactct 389  Q
    |||||| |||||||  ||||||| ||||| ||| ||||||||||| ||||||||||||||||| |||  | |   ||||| | |||||||| || ||| |    
T  147962 gaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaaccttaaggcaataggt-ttatgggttatatgttgttcaacatttacttt 147864  T
Q  390 tttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||||    
T  147863 tttatcagatgtgggacatataactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 411
Target Start/End: Original strand, 20870577 - 20870718
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||||||| ||| | ||||||| |||||||  ||||| ||| ||||||||||  ||||| |||||||||        |||||||||||||||||||    
T  20870577 accgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttata 20870676  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatata 411  Q
     ||||||||||||| ||| ||||||| ||||||| |||||||    
T  20870677 agatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 25561901 - 25561985
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||  |||||||  | ||||||||||    
T  25561901 atgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaacaacaa 25561985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 277 - 412
Target Start/End: Original strand, 9482606 - 9482750
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 368  Q
    |||||||||| ||||||||| |||||||  ||||||  ||||| | | |||||||||| |||||| ||| |||||||||||        |||||||||||    
T  9482606 gaaccgtccacatcgaggctagaacaaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttactta 9482705  T
Q  369 ta-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || | ||||||||||| |||||||||||| |||||| ||||||||    
T  9482706 taaggtgttcaacctttactcttttatcccatgtggaacatataa 9482750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 421
Target Start/End: Complemental strand, 30441236 - 30441084
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat---- 369  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||        
T  30441236 gtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataatt 30441137  T
Q  370 -agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     || ||||||||||| ||| ||||| ||||||||||||||||||  |||||||    
T  30441136 aaggtgttcaacctttactattttagccgatgtgggacatataactcacactt 30441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 30359427 - 30359260
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 368  Q
    ||||| |||| || ||||||  ||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||| ||||||        |||||| ||||    
T  30359427 gaaccatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgctta 30359328  T
Q  369 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    || | |||||||| || |||||||||||||||||| |||||||||  |||||||  ||||||||||||    
T  30359327 taaggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgtacacaacaacaa 30359260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 421
Target Start/End: Complemental strand, 40518748 - 40518585
Alignment:
Q  267 ggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtc 358  Q
    |||| |||||| |||||||| || |||||| ||||||| |||||||  ||||  || |||||||||||| |||||||||||| ||        |||||||    
T  40518748 ggagctcagaggaccgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtc 40518649  T
Q  359 ctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    |||||| |||| || ||||||||||| ||| || |||| ||||||||||||||||  |||||||    
T  40518648 ctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacactt 40518585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 34835363 - 34835221
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||| | ||||||||| ||| ||| |||||||  ||||  ||| ||||||||||| |||||| |||||||||||        ||||||||||||||||    
T  34835363 accgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835264  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
     | ||||||||||| ||| ||||||| ||||||||||||||||    
T  34835263 aggtgttcaacctttactattttatcggatgtgggacatataa 34835221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 45121663 - 45121797
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat-aga 372  Q
    ||||| ||||||||| |||||||  || |||| ||||| | ||||||||||||| ||||||||||||||         |||| ||||||||||||| ||     
T  45121663 gtccacatcgaggctagaacaaccccataagtaagagagatatcacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataagg 45121762  T
Q  373 tgttcaaccttcactcttttatccgatgtgggaca 407  Q
    || |||||||| |||||||||||||||||||||||    
T  45121763 tgatcaacctttactcttttatccgatgtgggaca 45121797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 33113390 - 33113535
Alignment:
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactc 388  Q
    ||||||| |||| ||  ||||| ||| ||||||||||| ||||| ||||||||||||        |||||||||||||||| || |||||||||| |||     
T  33113390 gaacaaccacactagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttacta 33113489  T
Q  389 ttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||| ||||||||||  || ||||  |||||||||||    
T  33113490 ttttatccgatgtaggacatataactcaaacttgtacacaacaaca 33113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 41129142 - 41129066
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 355  Q
    |||||||| ||||||| ||||||||| |||||||| ||||| ||| ||||||| ||| |||||||||||| ||||||    
T  41129142 accgtccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaagacaatgg 41129066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 43274864 - 43274948
Alignment:
Q  352 atgggtcctcttacttatag-atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    |||||||||||||||||||  || ||||||||| ||||||||||| ||||||  ||||||||  |||||||| ||||||||||||    
T  43274864 atgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcacacttatacacaacaacaa 43274948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 421
Target Start/End: Original strand, 1013874 - 1014026
Alignment:
Q  278 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat 369  Q
    |||| |||| ||||||||| |||||||  ||||||| | ||| ||| ||||||||||| ||||||  ||||||||||        |||||||||||||||    
T  1013874 aaccatccacatcgaggctagaacaaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttat 1013973  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    | | |||||||| || ||| ||||||||||||||| ||||||||  |||||||    
T  1013974 agggtgttcaacttttactattttatccgatgtggaacatataactcacactt 1014026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 1514002 - 1514061
Alignment:
Q  354 gggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||    
T  1514002 gggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataa 1514061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 5916021 - 5915946
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||    
T  5916021 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 5915946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 8794180 - 8794101
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||| |||||||||| || | |||||||||||||||| |||||||||  |||||||  |||||||||||    
T  8794180 gtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaaca 8794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 8918849 - 8918932
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | ||||||||||| |||||  |||| |||||||||||| |||  ||||||| ||||||||||||    
T  8918849 atgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaacaaca 8918932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 431
Target Start/End: Original strand, 20995425 - 20995566
Alignment:
Q  284 ccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttatagatgttcaacctt 383  Q
    ||||||| ||||  || |||| |||||||||||||| ||| |||| |||||| |||||||||||||||||||| |     |  || || ||||||||||     
T  20995425 ccatatctaggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggcaatgggac-----aaataaag-tgttcaacctc 20995518  T
Q  384 cactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||| ||||||| |||||| |||||||||  ||||||| |||||||||    
T  20995519 cacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 45122774 - 45122638
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 373  Q
    |||| ||||||||||||||||| |||||||  ||||| ||  ||||||| ||| |||||||||||| |||||        |||||||||||||||| | |    
T  45122774 tccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggt 45122675  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatat 410  Q
    |||||||||| ||| |||||||||||| ||| |||||    
T  45122674 gttcaacctttactattttatccgatgcgggccatat 45122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 399
Target Start/End: Original strand, 9483189 - 9483320
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 368  Q
    |||||||||| ||||||||| |||||||  ||| ||  | ||| ||| ||||||||||| |||||||||||| ||        |||||||||||||||||    
T  9483189 gaaccgtccacatcgaggctagaacaaccgcacgagcaaaagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttactta 9483288  T
Q  369 t-agatgttcaaccttcactcttttatccgat 399  Q
    | || ||||||||||| |||||||||||||||    
T  9483289 taaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 426
Target Start/End: Original strand, 18372785 - 18372859
Alignment:
Q  353 tgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 426  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 45123077 - 45122996
Alignment:
Q  352 atgggtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| ||||||||| || |||| |||||| ||| ||||||||||||||||||||||||  ||||||| |||||| |||||    
T  45123077 atgggtcatcttactta-aggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacagcaaca 45122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 41416256 - 41416317
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||    
T  41416256 atggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa 41416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 9608818 - 9608738
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||| ||||||||||| | ||||||||||| ||| || |||||||| ||||||||||||  ||||||| |||||||||    
T  9608818 atgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 434
Target Start/End: Complemental strand, 30359764 - 30359599
Alignment:
Q  278 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat 369  Q
    ||||||||| ||||| | | |||||||  || |||| ||||| ||| ||||||||||| ||||| |||||||  ||||||        ||||||||||||    
T  30359764 aaccgtccacatcgaagttagaacaaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttat 30359665  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | | |||||||| || ||||||||||| |||||| |||||||||  |||||||  |||||||||||    
T  30359664 aaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 30359599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 41972231 - 41972151
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||| | ||||||| | ||||||||||| ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  41972231 atgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 9309052 - 9308970
Alignment:
Q  352 atgggtcctcttacttatag-atgttcaaccttcactcttttatccgatgtg--ggacatataatccacacttacacacaaca 431  Q
    |||||||||||||||||||  ||||||||| || ||||||||||| ||||||  ||||||||||  ||||||| |||||||||    
T  9309052 atgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 426
Target Start/End: Original strand, 45121999 - 45122070
Alignment:
Q  356 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 426  Q
    ||||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||  ||||||| ||||    
T  45121999 gtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 426
Target Start/End: Original strand, 18372342 - 18372416
Alignment:
Q  353 tgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 426  Q
    |||||| ||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||    
T  18372342 tgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 40518225 - 40518147
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||| ||| ||||| ||||||| |||||||  ||||| ||  ||||||||||| ||||||||||||||| |||||    
T  40518225 accgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggt 40518147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 32640633 - 32640694
Alignment:
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 433  Q
    |||||||||||| |||||||||||||||||| |||| ||||  ||||||| ||| |||||||    
T  32640633 atgttcaacctttactcttttatccgatgtgagacagataactcacacttccacgcaacaac 32640694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 434
Target Start/End: Original strand, 37544496 - 37544658
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-ag 371  Q
    |||||| ||||||||| |||||||  ||||||| ||| | ||| ||||||||||| ||||||||||| | |        |||||||||||| ||||| |     
T  37544496 cgtccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataat 37544595  T
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     ||||||||||| ||| |||||||||||||| ||| |||||  |||||||   ||||||||||    
T  37544596 gtgttcaacctttactattttatccgatgtgcgacttataactcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 4154751 - 4154831
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||| | ||||||| | |||||||||| |||| || |||| ||||||||||||||||  ||||||| |||||||||    
T  4154751 atgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 9507933 - 9507858
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| ||||||||||||||||| | | ||| || ||| ||  ||||||||||| ||||||||||||| |||||||    
T  9507933 gtccacatcgaggcttgaacaaccatataagagatagagacgccacactcttacccaaaaccttaaggtaatgggt 9507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 412
Target Start/End: Original strand, 18371996 - 18372140
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 368  Q
    ||||||| || || |||||| || ||||  |||||| |||||| ||| ||||||||||| ||||||||||| |||        |||| ||||||||||||    
T  18371996 gaaccgttcacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttactta 18372095  T
Q  369 t-agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    | || ||||||||||| ||| ||||||  ||||||| ||||||||    
T  18372096 taaggtgttcaacctttactattttattggatgtggtacatataa 18372140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 20130513 - 20130462
Alignment:
Q  360 tcttacttatagatgttcaaccttcactcttttatccgatgtgggacatata 411  Q
    ||||||||| || |||||||| || |||||||||||||||||| ||||||||    
T  20130513 tcttacttaaaggtgttcaacttttactcttttatccgatgtgagacatata 20130462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 40579276 - 40579351
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||| | |||||||||||||    
T  40579276 gtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaatcctaaggcaatgggt 40579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 6731953 - 6731907
Alignment:
Q  375 ttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacactt 6731907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 40579591 - 40579661
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||| || ||  ||||||||| |||||||    
T  40579591 atgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacactt 40579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 5274907 - 5274854
Alignment:
Q  301 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||| ||||||| || ||| ||||||||||||||| ||||| ||||||||||||    
T  5274907 caacaacacaagcgatagagacatcacactcttactcaaaatcttaaggcaatg 5274854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 12284014 - 12283957
Alignment:
Q  291 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaag 348  Q
    |||||| ||||||| |||||||||||||| |||  |||||||||  ||||||||||||    
T  12284014 gaggctagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaag 12283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 18372692 - 18372757
Alignment:
Q  356 gtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||  ||| ||||||||  |||||||    
T  18372692 gtcctcttacttataagtgttcaacctttactattttatccgaaatggaacatataaatcacactt 18372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 18373020 - 18373077
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||| ||||| | ||||||||||| ||| |||||||||| |||||||||||||    
T  18373020 gtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataa 18373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 1014332 - 1014400
Alignment:
Q  354 gggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||| | ||||||||||| ||| ||||||| |||||  |||||||||  |||||||    
T  1014332 gggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacactt 1014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 8919148 - 8919220
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    |||||||| ||||| ||| ||||||| |||||||  | ||| ||| ||||||||||  |||||||||||||||    
T  8919148 accgtccacatcgaagctagaacaaccacacaagcaaaagagacaccacactcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 9620682 - 9620755
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| ||| |||| ||| |||| |||||||||||||| |||||| ||||||  | |||| ||||||||||||    
T  9620682 accgtccacatccaggcctgagcaaccacacaagtgagagagacatcaaactctt--ataaaatcttaaggcaatg 9620755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 12156704 - 12156740
Alignment:
Q  321 acatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  12156704 acatcacactcttacccaaaaccttaagacaatgggt 12156740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 283 - 434
Target Start/End: Complemental strand, 30244420 - 30244260
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agat 373  Q
    |||| ||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || |    
T  30244420 tccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggt 30244321  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     ||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  30244320 cttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 7517725 - 7517570
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 378  Q
    ||||||||| ||||||| |||||||||||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||    
T  7517725 atcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttca 7517626  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  7517625 acctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 1085620 - 1085784
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||| ||||| ||  ||||||||||| |||||||||||||||||||||        |||||||||||||    
T  1085620 accgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 1085719  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  1085720 aagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 45434781 - 45434626
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttca 378  Q
    ||||||||| |||||||  ||||||| ||||| ||||||||||||||| |||||||||||||||        ||||||||||||||||||| | ||||||    
T  45434781 atcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttca 45434682  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||| ||| ||||||||||||||||||||||||   ||||||  |||||||||||    
T  45434681 acctttacttttttatccgatgtgggacatataacttacacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 434
Target Start/End: Complemental strand, 30245223 - 30245067
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 373  Q
    |||| ||||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||||||        |||| ||||||||||| | |    
T  30245223 tccacatcgaggcttgaacaaccacacaag--agagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggt 30245128  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||| ||||||||||||||||||| ||||||||  |||||||  |||||||||||    
T  30245127 gttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 7554152 - 7554015
Alignment:
Q  306 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatcc 396  Q
    ||||||| |||||| ||| ||||||||||| |||||||||||||| ||||||        ||||||||||||| | ||||||||||| ||| ||||||||    
T  7554152 acacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatcc 7554053  T
Q  397 gatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||  ||||||| ||||||||||||    
T  7554052 gatgtgggacatataactcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 30255414 - 30255329
Alignment:
Q  350 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  30255414 caatgggccctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 34218038 - 34218203
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat- 369  Q
    |||||||| ||||||||||||||||| | ||||| |||||| ||| ||||||||||| |||||||||||| ||||||        ||||||| ||||||     
T  34218038 accgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttata 34218137  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    || |||||||| || ||| |||||||||||||| |||||||||  |||| ||  ||||||||||||    
T  34218138 aggtgttcaacatttacttttttatccgatgtgagacatataactcacatttgtacacaacaacaa 34218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 23381 - 23545
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||  |||| |  ||||| ||| ||||||||||| |||||||||||||||||        |||||||||||||||||    
T  23381 accgtccaaatcgaggctagaacaaccgcacatgcaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttata 23480  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||| || |||||||||||| ||||||||  |||| || ||||||||||||    
T  23481 aggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 22566712 - 22566830
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 415  Q
    ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| |||||||||||||||||||||||||| |  |    
T  22566712 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactc 22566811  T
Q  416 acacttacacacaacaaca 434  Q
    |||||| || |||||||||    
T  22566812 acacttgcatacaacaaca 22566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 30245569 - 30245484
Alignment:
Q  350 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| ||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  30245569 caatgggccctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 45754860 - 45754704
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 378  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| ||||        ||| |||||||||| || ||||||    
T  45754860 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttca 45754761  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    || || ||| ||||||||||||| ||||||||||  |||||||  |||||||||||||    
T  45754760 acatttactattttatccgatgt-ggacatataactcacacttgtacacaacaacaat 45754704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 41910703 - 41910762
Alignment:
Q  375 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  41910703 ttcaacctttactcttttatccgatgtgggacatataactcacacttacacacaacaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 6054714 - 6054572
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||| ||||| ||||||| | ||||||  |||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  6054714 accgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttata 6054615  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || |||||||| || ||| |||||||||||||| |||||||||    
T  6054614 aggtgttcaacatttactattttatccgatgtgagacatataa 6054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 11845345 - 11845203
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    |||||| | ||||||||| |||||||  ||||||  ||||| ||| ||||||||||  |||||||||||||||||||        |||||||||||||||    
T  11845345 accgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttata 11845246  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
     | ||||||||||| ||| ||||||||||||||| ||||||||    
T  11845245 aggtgttcaacctttactattttatccgatgtggaacatataa 11845203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 30244776 - 30244691
Alignment:
Q  350 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| |||||||||| ||||| | ||||||||||| |||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  30244776 caataggtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 40094859 - 40094943
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||||||||||| | |||| |||||| |||||||||| ||||||| |||||||||  ||||||| |||||||||||||    
T  40094859 atgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaacaa 40094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 434
Target Start/End: Original strand, 22567047 - 22567206
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 373  Q
    |||| ||||||||  |||||||  ||||||  ||||| ||| |||||||||||  |||||||||||||||||        |||||||||||||||| | |    
T  22567047 tccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 22567146  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||| ||||||||||||||||| |||||||| |  ||||||| || |||||||||    
T  22567147 gttcaacctttactcttttatccgatgt-ggacatattactcacacttgcatacaacaaca 22567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 24177508 - 24177425
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||| |||||||||| | |||||| |||| ||||||||||||||||||||||||||||  || |||| ||||||||||||    
T  24177508 atgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 45433395 - 45433231
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc--------ctcttacttata 370  Q
    |||| ||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||| ||||||||||| |||         ||||||||||||    
T  45433395 accgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttata 45433296  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| |||||||||||||||||||  |||||||  |||||||  |||||||||||    
T  45433295 aggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaacaaca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 14681662 - 14681522
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta-t 369  Q
    |||||||| ||| ||||| ||||||| ||||  |||||||||||  ||||||||||| |||||||||||| ||||||||        |||||||||||      
T  14681662 accgtccacatcaaggctagaacaaccacacttgtgagagacac--cacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttaca 14681565  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || ||||||||||| ||| ||||||| ||||||||||||||||    
T  14681564 aggtgttcaacctttactattttatctgatgtgggacatataa 14681522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 24838722 - 24838872
Alignment:
Q  296 ttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt---------cctcttacttata-gatgttcaaccttca 385  Q
    ||||||||| |||||||  ||||| || |||||||||||| |||||||||||| ||| ||||         | ||||||||||| | ||||||||||| |    
T  24838722 ttgaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaaccttta 24838821  T
Q  386 ctcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||| ||||||| |||||||||   ||||||| |||||||||||||    
T  24838822 ctcttttattcgatgtgagacatataacttacacttatacacaacaacaat 24838872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 433
Target Start/End: Original strand, 36109007 - 36109084
Alignment:
Q  357 tcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 433  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||| || ||||||  ||||||| |||||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 424
Target Start/End: Original strand, 37533368 - 37533522
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  37533368 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttata 37533467  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttaca 424  Q
    || ||||||||||| ||| |||||| | |||| | ||||||||  ||||||||||    
T  37533468 aggtgttcaacctttactattttattcaatgtagaacatataactcacacttaca 37533522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 412
Target Start/End: Complemental strand, 19122876 - 19122744
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 378  Q
    |||||| || ||||||| |||||||  ||| | ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || ||||||    
T  19122876 atcgagactagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttca 19122777  T
Q  379 accttcactcttttatccgatgtgggacatataa 412  Q
    ||||| ||| ||||||||||||| ||||||||||    
T  19122776 acctttactattttatccgatgt-ggacatataa 19122744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 36534869 - 36534953
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||||||||||| | ||||||||||  ||| |||||||||| |||||||||||||   |||||| |||||||||||||    
T  36534869 atgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaacaacaa 36534953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 47129168 - 47129085
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||  |||||||   ||||||||||    
T  47129168 atgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttgtgcacaacaaca 47129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 29157683 - 29157568
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||| ||||||||||| |||||||||||||||||||        ||| ||||||||||| | ||||||||||| ||| ||||||||| |||||||    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtggga 29157584  T
Q  406 catataatccacactt 421  Q
    |||||||  |||||||    
T  29157583 catataactcacactt 29157568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 433
Target Start/End: Original strand, 36939741 - 36939900
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gat 373  Q
    |||| ||||||||| |||||||  || |||  ||||| ||| |||||| |||| |||||||||||||||||||        ||||||||||||||| | |    
T  36939741 tccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggt 36939840  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 433  Q
    ||||||| || ||| |||||| |||| ||||||||||||  ||||||| |||| ||||||    
T  36939841 gttcaacttttactattttatacgatttgggacatataactcacacttgcacagaacaac 36939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 37533095 - 37533165
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||| |||||||||||||||  |||||||    
T  37533095 atgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacactt 37533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 40230376 - 40230454
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 429  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| |||||||||||||||||   |||||| |||||||    
T  40230376 atgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 30244506 - 30244453
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 332  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  30244506 accgtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 30253638 - 30253571
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||| ||||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||||||    
T  30253638 tccacatcgaggcttgaacaaccacacaag--agagacac--cacactcttacccaaaaccttaaggcaatg 30253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 1085288 - 1085417
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat-agatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||| ||||||||||| ||||||||||||||||||        ||| ||||||||||| || |||||||| || ||| ||||||||||| |||||    
T  1085288 agagaaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatggga 1085387  T
Q  406 catataatc-cacacttacacacaacaaca 434  Q
    |||| || | ||||||| ||||||||||||    
T  1085388 cataaaaactcacacttgcacacaacaaca 1085417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 43241564 - 43241484
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||| ||||||||| | ||||||||||| | | ||||||||||||||| ||||||||  ||||||| |||||||||||||    
T  43241564 gtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaacaa 43241484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 118386 - 118469
Alignment:
Q  352 atgggtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| ||||||||||||| || ||||||||||| ||| || |||| ||||||||||||||||   |||||| ||||||||||||    
T  118386 atggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 16569269 - 16569186
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | | ||||||||| ||| || ||||||||||| |||||||||  ||||||| || |||||||||    
T  16569269 atgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 16596393 - 16596476
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | | ||||||||| ||| || ||||||||||| |||||||||  ||||||| || |||||||||    
T  16596393 atgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 36623033 - 36622950
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| ||||| |||||||| | |||| |||||| ||| ||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  36623033 atggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaataaca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 30253721 - 30253671
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 332  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  30253721 gtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30253671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 23569043 - 23569084
Alignment:
Q  316 gagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  23569043 gagagacatcacactcttacccaaaaccttaaggcaatgggt 23569084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 30245309 - 30245256
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 332  Q
    |||||||| || |||||||||||||| |||||||||||||| ||| ||||||||    
T  30245309 accgtccacattgaggcttgaacaaccacacaagtgagagagacaccacactct 30245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||||||| ||||||||||| ||||| ||||||||||  ||||||| |||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 47129523 - 47129450
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 352  Q
    |||||||| ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||    
T  47129523 accgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 8128526 - 8128606
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||||||||||| |||| | ||||||||||| | | || |||||||| ||||||||||||  ||||||| |||||||||    
T  8128526 atgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 9901698 - 9901635
Alignment:
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||  |||||||| |||||| ||||    
T  9901698 agatgttcaacctttactgttttatccgatgt-ggacatataactcacacttatacacaataaca 9901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 28301628 - 28301708
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||||||| | |||||| | || ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  28301628 atgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 37167935 - 37167859
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 355  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||| ||||| ||||||    
T  37167935 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaactttaagtcaatgg 37167859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 434
Target Start/End: Complemental strand, 41854776 - 41854625
Alignment:
Q  291 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agatgttcaacc 381  Q
    |||||| |||||||  ||||||| ||| | || |||||||||||| |||||||||||||||        || |||| |||| ||||| || |||||||||    
T  41854776 gaggctagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacc 41854677  T
Q  382 ttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || ||||||||| | ||||||||||||||||  || |||| ||||||| ||||    
T  41854676 tttactctttta-ctgatgtgggacatataactcatacttgcacacaaaaaca 41854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 44361557 - 44361608
Alignment:
Q  360 tcttacttatagatgttcaaccttcactcttttatccgatgtgggacatata 411  Q
    ||||||||| || |||||||| || |||||||||||||||||| ||||||||    
T  44361557 tcttacttaaaggtgttcaacttttactcttttatccgatgtgagacatata 44361608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 37532755 - 37532821
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaacctt 345  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||    
T  37532755 accgtccacatcgaggctagaacaacagcacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 7517806 - 7517765
Alignment:
Q  284 ccatatcgaggcttgaacaacgacacaagtgagagacacatc 325  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  7517806 ccatatcgaggctagaacaaccacacaagtgagagagacatc 7517765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 7518072 - 7518031
Alignment:
Q  284 ccatatcgaggcttgaacaacgacacaagtgagagacacatc 325  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  7518072 ccatatcgaggctagaacaaccacacaagtgagagagacatc 7518031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 37346043 - 37345998
Alignment:
Q  308 acaagtgagagacacatcacactcttacacaaaaccttaaggcaat 353  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||    
T  37346043 acaagtgagagagacgtcacactcttactcaaaactttaaggcaat 37345998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 45755075 - 45755010
Alignment:
Q  285 catatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc 350  Q
    |||||||||||||||||||| |||||||| || || ||| |||||| |||| |||||  |||||||    
T  45755075 catatcgaggcttgaacaaccacacaagtaagggagacaccacacttttacccaaaattttaaggc 45755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 2512630 - 2512582
Alignment:
Q  306 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||||||||| | |||||||||||||||||||  ||||| |||||    
T  2512630 acacaagtgagagatatatcacactcttacacaaaatattaagacaatg 2512582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 20599383 - 20599303
Alignment:
Q  356 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||| ||||| | |||| | |||| ||| ||||||||||| ||||||||||||  |||||||| | ||||||||||    
T  20599383 gtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcacacttatagacaacaacaa 20599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 6e-35; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 26661526 - 26661690
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||| |||||||||||||||        ||||||||||| ||||||     
T  26661526 accgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttata 26661625  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || ||||||||||| ||||||||| ||||||||||||||||||  |||||||  |||||||||||    
T  26661626 aggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 31767165 - 31767330
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| |||||| || ||||||| |||||||  ||| | || |||||||||||| |||||||||||||||        |||||||||||||||||||    
T  31767165 accgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttata 31767264  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     | ||||||||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  31767265 aggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgcacacaacaacaa 31767330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 434
Target Start/End: Complemental strand, 34364688 - 34364497
Alignment:
Q  252 tgttaggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    |||| ||||| ||| |||| |||| ||||| |||| ||||||||| || ||||  || ||| |||||| ||||||||||||||| ||||||||||||||     
T  34364688 tgttgggtcactgggggagctcagggaaccatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggct 34364589  T
Q  352 atgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||        ||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  34364588 atgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 34364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 41157145 - 41156978
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||| ||| ||||||||| ||||||| |||||||  | ||| ||| ||||||||||| ||||||||||| ||||||        ||||||||||||||||    
T  41157145 accgcccacatcgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttata 41157046  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 437  Q
     | ||||||||||| ||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  41157045 aggtgttcaacctttactcttttatccgttatgggacatataattcacacttgcacacaacaacaatt 41156978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 37556256 - 37556101
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata-gatgttcaa 379  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| ||||||       ||||||||||||| |||||||||    
T  37556256 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatggtcctcttacttataagatgttcaa 37556157  T
Q  380 ccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| ||| |||| ||||||||||||||||||||  |||||||  |||||||||||    
T  37556156 cctttactatttttatccgatgtgggacatataactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 22077499 - 22077660
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata 370  Q
    |||||||||||||| |||||||||||  || |||||||||| ||  ||||||||||| |||||||||||||| |        ||||||||||||||||||    
T  22077499 accgtccatatcgatgcttgaacaaccgcataagtgagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttata 22077598  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
     | ||||||||||| ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  22077599 aggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 432
Target Start/End: Complemental strand, 17294696 - 17294569
Alignment:
Q  314 gagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga-tgttcaaccttcactcttttatccgatgtggg 404  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  17294696 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtggg 17294597  T
Q  405 acatataatccacacttacacacaacaa 432  Q
    ||||||||  |||||||  |||||||||    
T  17294596 acatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 37555874 - 37555721
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg-------ggtcctcttacttatagatg--ttca 378  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| | |       |||||||||||||||| |||  ||||    
T  37555874 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctaaggatttaaggtcctcttacttata-atgtattca 37555776  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 433  Q
    ||||||||| |||||||||||||||||| |||||  |||||||  ||||||||||    
T  37555775 accttcactattttatccgatgtgggacttataactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 279 - 432
Target Start/End: Complemental strand, 41157529 - 41157367
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||| ||| ||||||||| ||||||| |||||||  ||| | ||| ||||||||||| |||||||| ||||||||||||        |||||||||||||    
T  41157529 accgcccacatcgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttata 41157430  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
     | |||||||| || ||||||||||| ||||||||||||||||  ||||||| ||||||||||    
T  41157429 aggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 44290828 - 44290980
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactctt-acacaaaaccttaaggcaatgggt--------cctcttacttat 369  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||| || |||||||||||||||||||||        ||||||||||||    
T  44290828 accgtccacatcgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat 44290927  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    | | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  44290928 aaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 44290980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 44290462 - 44290613
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||   |||||  ||| | ||| || |||||||| |||||||||||||||||||||        |||||||||||||    
T  44290462 accgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 44290561  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     ||||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  44290562 agatgttcaacctttactattttatccgatgtgggacatataactcacactt 44290613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 41184510 - 41184595
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  41184510 atgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaat 41184595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 428
Target Start/End: Complemental strand, 45084530 - 45084378
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--atgggtcctcttacttata-gatgt 375  Q
    |||||||  ||||||| | |||||||  ||||||  ||||| ||| ||| ||||||| |||||||||||| |   ||||||||||||||||||| | |||    
T  45084530 accgtccgcatcgaggttagaacaaccgcacaagcaagagagacaccactctcttacccaaaaccttaagacgttatgggtcctcttacttataaggtgt 45084431  T
Q  376 tcaaccttcactcttttatccgatgtgggacatataatccacacttacacaca 428  Q
    |||||||| ||| ||||||||||||||||| ||||||  ||||||| ||||||    
T  45084430 tcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 3875308 - 3875477
Alignment:
Q  252 tgttaggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    |||||||||||  | |||| || ||| |||||||| ||||||||| ||||||| |||| ||||||||| ||  |||| ||||||  ||||||||||||||    
T  3875308 tgttaggtcatgaggggagctcggaggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggca 3875407  T
Q  352 atgg--------gtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||        |||||||||||||| || ||| ||||||| ||| |||||||||||||| |||||||||    
T  3875408 atgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataa 3875477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 41142527 - 41142362
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactctt-acacaaaaccttaaggcaatgggt--------cctcttacttat 369  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||  ||||||||| ||  ||||||||||||||||||||        ||| ||||||||    
T  41142527 accgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttat 41142428  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| |||| |||||||    
T  41142427 aaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaacaaca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 422
Target Start/End: Original strand, 50052108 - 50052179
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactta 422  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  50052108 atgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactta 50052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 24600316 - 24600479
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 368  Q
    |||| ||||| ||||||||| ||||||| | || || |||||| ||| |||||||||||||||||||||||| ||        ||| || ||||||||||    
T  24600316 gaactgtccacatcgaggctagaacaaccatactagcgagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttactta 24600415  T
Q  369 t-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    | | |||||||||||| ||| || |||||||| ||||||||||||  ||||||| |||||||||    
T  24600416 taatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 434
Target Start/End: Complemental strand, 34365086 - 34364915
Alignment:
Q  272 tcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctctt 363  Q
    |||| ||||| |||| ||||||| | || ||||  || ||| |||||| ||| ||||||||||| |||||||||||||| ||||||        ||||||    
T  34365086 tcagggaaccatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctctt 34364987  T
Q  364 acttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| | ||||||||||| | | |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  34364986 acttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 409
Target Start/End: Original strand, 48588492 - 48588631
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||| ||||| ||| | ||||||||| |||||||||||||||||        ||||| ||||||||||     
T  48588492 accgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttata 48588591  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacata 409  Q
    || ||||||||||| ||| ||||||||||||| |||||||    
T  48588592 aggtgttcaacctttactattttatccgatgtcggacata 48588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 3537603 - 3537745
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||| |||||        |||||||||||| ||     
T  3537603 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcata 3537702  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || ||||||||||| ||| ||||||||||||||||||||||||    
T  3537703 aggtgttcaacctttactattttatccgatgtgggacatataa 3537745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 433
Target Start/End: Complemental strand, 40082556 - 40082398
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg-------ggtcctcttacttata-gatg 374  Q
    |||| ||||||||| ||||||   ||||||  ||||| | | ||||||||||| ||||||||||||||||||       | |||||||||||||| | ||    
T  40082556 tccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttatgatcctcttacttataaggtg 40082457  T
Q  375 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 433  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||| | |||||||||    
T  40082456 ttcaacctttactattttatccgatgtaggacatataactcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 9956054 - 9955899
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat---------gggtcctcttacttataga-tgttc 377  Q
    ||||||||| || ||||  ||||||  ||||| ||||||||||||||| |||||||||||||||||         |||||||||||||||||   |||||    
T  9956054 atcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttc 9955955  T
Q  378 aaccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaa 432  Q
    |||||| ||| |||| ||| ||||||||||||||||  |||||| |||||||||||    
T  9955954 aacctttactttttttatctgatgtgggacatataactcacactaacacacaacaa 9955899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 37850604 - 37850768
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| ||||||||| || ||||  ||||||||||||| ||| ||||||||||  | |||||||||  ||        |||||| ||||||||||||    
T  37850604 accgtccacatcgaggctagagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttata 37850703  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||  ||| |||||| |||||||||||||||||  ||||||| ||||||||||||    
T  37850704 aggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 3537232 - 3537302
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  3537232 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 3537302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 434
Target Start/End: Original strand, 26661919 - 26662066
Alignment:
Q  296 ttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agatgttcaaccttcac 386  Q
    ||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||| ||| |||||| || ||||||||||| ||    
T  26661919 ttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttac 26662018  T
Q  387 tcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||| ||| ||||| ||||||  |||||||  |||||||||||    
T  26662019 tcttttatctgatatgggatatataactcacacttgtacacaacaaca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 412
Target Start/End: Complemental strand, 14319021 - 14318879
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| || |||||| |||||||  ||||| | ||||| ||| ||||||||||| |||||||||||||||        ||||||| ||||||||||     
T  14319021 accgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttata 14318922  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || ||||||||||| ||| |||||||||| |||| ||||||||    
T  14318921 aggtgttcaacctttactattttatccgacgtggaacatataa 14318879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 45493978 - 45494124
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 370  Q
    |||||||| ||||||||||||||||| ||| |||  ||||| ||| ||||||||||  |||||| |||||||||||||        || |||||||||||    
T  45493978 accgtccacatcgaggcttgaacaaccacataaggaagagagacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttata 45494077  T
Q  371 -----gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
         | ||||||||||| ||| ||||||||||||||||||||||||    
T  45494078 tatatggtgttcaacctttactattttatccgatgtgggacatataa 45494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 21378126 - 21378210
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||||||||||| ||| ||||||||| ||| || |||||||| ||||||||||||   |||||| |||||||||||||    
T  21378126 atgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaacaa 21378210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 435
Target Start/End: Complemental strand, 29798353 - 29798188
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||| ||||||||| | ||||||| ||||  |  ||||| ||| ||||||||||  ||| |||||||||||||||||        |||||||||||||    
T  29798353 accgtctatatcgaggttagaacaaccacacttgcaagagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttata 29798254  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     | ||||||||||| ||| |||||||| |||| ||||||||||  ||||||| || ||||||||||    
T  29798253 aggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaacaa 29798188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 11977434 - 11977270
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  |||  |  ||||| ||||||||||||||| |||||||||||||||        ||| || |||||||||||     
T  11977434 accgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttata 11977335  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || |||||||| || ||| ||||| ||||||||||||||||||  |||||||  ||||| |||||    
T  11977334 aggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgtacacagcaaca 11977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 34649592 - 34649428
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||| ||  ||||| ||  | ||||||||| |||||||||||||||        |||||| ||   |||||||    
T  34649592 accgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttata 34649493  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||||||||||||||||||||||||||||  |||||||  | |||||||||    
T  34649492 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 3550838 - 3550723
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||| ||||||||||| |||||| ||||||||||||||        ||||||||||||| | ||||||||||| ||| ||||||| |||||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 3550739  T
Q  406 catataatccacactt 421  Q
    |||||||  |||||||    
T  3550738 catataactcacactt 3550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 32594748 - 32594871
Alignment:
Q  307 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccg 397  Q
    ||||||| ||||| ||| ||||||||||| |||||||||||| |||||        |||||||||||||||| | ||||||||||| ||| ||||||| |    
T  32594748 cacaagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctg 32594847  T
Q  398 atgtgggacatataatccacactt 421  Q
    |||| ||||||||||  |||||||    
T  32594848 atgtaggacatataactcacactt 32594871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 41759637 - 41759486
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||| ||||| ||||||| ||| |||  ||||| ||| ||||||||||| |||||||||||||||        |||| || ||||||||||     
T  41759637 accgtccacatcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttata 41759538  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || |||||||| || ||| |||||||||||||| |||||||||  |||||||    
T  41759537 aggtgttcaacttttactattttatccgatgtgtgacatataactcacactt 41759486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 5528843 - 5528900
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  5528843 gtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataa 5528900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 434
Target Start/End: Original strand, 35154150 - 35154207
Alignment:
Q  377 caaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 5575174 - 5575110
Alignment:
Q  355 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccaca 418  Q
    |||||||||||||||| | ||||||||||| |||||| ||||||| |||||||||||||| ||||    
T  5575174 ggtcctcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 22077114 - 22077189
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| |||||||||||||||||  || ||||||| || || |||||||||||  |||||||||| |||||||    
T  22077114 accgtccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatg 22077189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 22793431 - 22793360
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 352  Q
    ||||||||| |||||  ||||||| |||||||| ||||| || |||||||||||| ||||||| ||||||||    
T  22793431 cgtccatattgaggccagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaa 22793360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 432
Target Start/End: Original strand, 66475 - 66638
Alignment:
Q  278 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat 369  Q
    ||||||||| || |||||| |||||||  |||||| |||||| ||   | |||||||| |||||||||||||| ||        || |||||||||||||    
T  66475 aaccgtccacattgaggctagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttat 66574  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    | | ||||||||||| ||| || |||||||| ||| ||||||||  ||||||| ||||||||||    
T  66575 aaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 434
Target Start/End: Original strand, 39066217 - 39066368
Alignment:
Q  292 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaacct 382  Q
    ||||| ||||||| ||| |||| ||||| ||| ||||||||||  |||||||||||| |||||        |||| ||||| ||||| | ||||||||||    
T  39066217 aggctagaacaaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacct 39066316  T
Q  383 tcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | ||| || |||||||||||| | ||||||  ||||||| ||||||||||||    
T  39066317 ttacttttctatccgatgtggaatatataactcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 35998252 - 35998176
Alignment:
Q  176 gtgtgtgtttgatttcgggattgcaacacacaaaaatatgtttgcatactttccgatgcgtttttgtcgtgattttt 252  Q
    |||| |||||||||||  | |||||| ||||||||  | |||||||| ||| | |||||||||||||||||||||||    
T  35998252 gtgtttgtttgatttcccgtttgcaatacacaaaagcacgtttgcatgcttcctgatgcgtttttgtcgtgattttt 35998176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 4878855 - 4878796
Alignment:
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||||| ||||||| ||||||||||||||| ||||||||  |||| || |||||||||    
T  4878855 atgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 32168705 - 32168780
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||| ||||||||||||    
T  32168705 gtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggt 32168780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 38804370 - 38804510
Alignment:
Q  290 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga-tgttcaac 380  Q
    ||||||| |||||||  ||||||  ||||| |||  |||||||||| |||||||||||||  ||||||        |||||||||||||   ||||||||    
T  38804370 cgaggctagaacaaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaac 38804469  T
Q  381 cttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||| |||||||||| ||||||||||| |||||  |||||||    
T  38804470 ctttactcttttattcgatgtgggacgtataactcacactt 38804510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 47380184 - 47380246
Alignment:
Q  292 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| |||| | |||||||||||| |  |||||||||||| |||||| |||||||||||    
T  47380184 aggcttgagcaaccagacaagtgagagagatgtcacactcttacccaaaactttaaggcaatg 47380246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 5320050 - 5320131
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    ||||||||||| ||||||| | |||||||| || ||| || |||||||||||| ||||||||  ||||||| || |||||||    
T  5320050 atgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 31190161 - 31190007
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaa 379  Q
    |||||| ||||||||| |||||||   |||||  ||||| ||| ||||||||||| |||||||||||||| ||||||||||| ||||||| | |||||||    
T  31190161 cgtccaaatcgaggctagaacaacccgacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtcctctaacttataaggtgttcaa 31190062  T
Q  380 ccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| |||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  31190061 cctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 39934963 - 39935101
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttat-agat 373  Q
    |||| ||||||||| ||||||| |||||||  ||||| ||||||||||||||| |||||| |||||||||||||        ||||||||||||| || |    
T  39934963 tccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggt 39935062  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  39935063 gttcaacctttactcttttatccgatgtaggacatataa 39935101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 432
Target Start/End: Original strand, 54017820 - 54017982
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||| ||| ||||| ||| ||||||| |||||||| ||||| ||| ||||||||||| ||||||||||||||         ||| |||||||||||||||    
T  54017820 accgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttata 54017919  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
     | ||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  54017920 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 25739429 - 25739593
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| |||| ||  ||||||  ||||| || |||||||||||| |||||||| || ||||||        ||||||||||||||||    
T  25739429 accgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttata 25739528  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     |||||||||| || ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  25739529 tgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 37726650 - 37726507
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttc 377  Q
    |||||||| ||||||||| ||||||| | |||||| ||| | || |||||||||||  |||||||| |||||||||| ||||||||||||| || | |||    
T  37726650 accgtccacatcgaggctagaacaactatacaagtaagataaacgtcacactcttatccaaaacctaaaggcaatggatcctcttacttataaggtattc 37726551  T
Q  378 aaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||| || ||| |||||||||||||| |||||||||  |||||||    
T  37726550 aacatttactattttatccgatgtgagacatataactcacactt 37726507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 42342392 - 42342556
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    |||||||| || |||||| |||||||  ||||||  ||||| || |||||||||||| |||||||||||| ||||||        |||||||||||||||    
T  42342392 accgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttata 42342491  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||| |||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  42342492 aggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 15773008 - 15772842
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||| | ||||||| |||||||  ||||| ||| ||||||||||  ||||||||||| ||||||        ||||||||||||||||    
T  15773008 accgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttata 15772909  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
     | |||||||| || ||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||    
T  15772908 aggtgttcaacatttactcttttatccgatatgggacatataactcacacttgcacacgacaacaat 15772842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 35946676 - 35946510
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| |||||| |||| ||||||||||||||||        ||||||||||||||||||    
T  35946676 accgtccacatcgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttata 35946577  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  35946576 aggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaacagcaat 35946510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 15773346 - 15773182
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgag--agacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 370  Q
    |||||| ||||||| | ||||||| |||||||  ||  ||| ||||||||||||||| |||||| ||||||||||| |        ||||||||||||||    
T  15773346 cgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttata 15773247  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     |||||||||| || |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  15773246 agatgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 435
Target Start/End: Complemental strand, 32589857 - 32589693
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 369  Q
    |||||||| |||||| || ||||||| |||||||  ||||| ||||| ||||||||| |||||||||||||||||        ||||||||||||||||     
T  32589857 accgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 32589758  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    || ||||||||||| | | |||||||  |||||||||||||| | ||||||| |||||||||||||    
T  32589757 aggtgttcaacctttattattttatcttatgtgggacatatact-cacacttgcacacaacaacaa 32589693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 33803256 - 33803417
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||| ||||||| ||| || ||  ||||||||||| ||| ||||||| |||||||||        |||||||||||||    
T  33803256 accgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttata 33803355  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||| || |||||||||    
T  33803356 tggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 431
Target Start/End: Complemental strand, 8328025 - 8327897
Alignment:
Q  312 gtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtg 402  Q
    |||||||| ||| ||||||||||| |||||||||||||||        |||||| |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  8328025 gtgagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtg 8327926  T
Q  403 ggacatataatccacacttacacacaaca 431  Q
    ||||||||||  ||||||| |||||||||    
T  8327925 ggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 37990643 - 37990807
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||  |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| ||||||||||||||     
T  37990643 accgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttata 37990742  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || |||||||| || ||| ||||||||||||||| ||||||||  |||||||  |||||||||||    
T  37990743 aggtgttcaacatttactattttatccgatgtggaacatataactcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 37990981 - 37991145
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| ||| |||  ||||| ||| ||||||||||| |||||||||||||| |||        ||||||||||||||||    
T  37990981 accgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttata 37991080  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||| |||||||| ||||| |||||||||  |||||||  |||||||||||    
T  37991081 aggtgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaaca 37991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 43346795 - 43346959
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| || |||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        ||| ||||||||||||    
T  43346795 accgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttata 43346894  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||| ||||||| ||||||||||||||||  |||||||  |||||||||||    
T  43346895 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 29644987 - 29645072
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||   |||||| ||||||||||||||    
T  29644987 atgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaacaacaat 29645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 435
Target Start/End: Complemental strand, 52634816 - 52634665
Alignment:
Q  292 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc-------ctcttacttata-gatgttcaacctt 383  Q
    ||||| |||||||  ||||||  ||||| || |||||||||||| |||||||||||||||||||||        |||||||||||| |  ||||||||||    
T  52634816 aggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtctcttacttataaggcgttcaacctt 52634717  T
Q  384 cactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     ||| ||||||||||||||||||||||||  |||||||  ||||||||||||    
T  52634716 tactgttttatccgatgtgggacatataactcacacttgtacacaacaacaa 52634665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 12114566 - 12114731
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||| ||| |||| |||| |||||||  ||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||        |||||||||||||    
T  12114566 accgaccacatcgtggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata 12114665  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
     | ||||||||||| ||| || |||||||||||||| ||||||   |||||| |||||||||||||    
T  12114666 aggtgttcaacctttacttttctatccgatgtgggatatataacttacacttgcacacaacaacaa 12114731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 54018202 - 54018366
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||| ||| ||||||||| ||||||| |||||||   |||| ||| ||||||||||| ||||||||||||||         |||||||||||||||||||    
T  54018202 accgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttata 54018301  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||| ||| ||||||||||||||||  ||||||||||  ||||||| |||| |||||||    
T  54018302 aggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcacataacaaca 54018366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 22304720 - 22304582
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 372  Q
    ||||| |||||| || |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||| |     
T  22304720 gtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataagg 22304621  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatata 411  Q
    | ||||||||| ||| |||||||||||||||||||||||    
T  22304620 tattcaacctttactattttatccgatgtgggacatata 22304582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 53117979 - 53118142
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata- 370  Q
    ||||| || ||||| ||| ||||||| ||||  |||||||| |||  |||||||||| ||||| |||||||||||||||       ||||| |||||||     
T  53117979 accgttcacatcgatgctagaacaaccacacttgtgagagagacactacactcttacccaaaatcttaaggcaatgggttttgaatcctctcacttataa 53118078  T
Q  371 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | ||||||||||| ||||||||||||||| ||| ||||||||  ||||||| | ||||||||||    
T  53118079 ggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 32462904 - 32463069
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat- 369  Q
    ||||| || ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||        ||| ||||||||||     
T  32462904 accgtacacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttata 32463003  T
Q  370 agatgttcaacc-ttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || | ||||||| || |||||| |||||||||||||||||||||  |||||||  |||||||||||    
T  32463004 aggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 29644666 - 29644749
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||| |||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||||||| ||||    
T  29644666 atgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaaaaaca 29644749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 42342082 - 42342258
Alignment:
Q  267 ggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtc 358  Q
    ||||||| ||| |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||        ||| |||    
T  42342082 ggagttcggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtc 42342181  T
Q  359 ctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||| ||   || ||| || ||||||||||||||||||| |||||| |  ||||||| ||||||||||||    
T  42342182 ctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaacaaca 42342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 432
Target Start/End: Original strand, 45395661 - 45395819
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttat-agat 373  Q
    |||| ||||||||| || ||||  ||||||||||||| ||| ||||||||||| |||||| ||||| |||||||        ||||||||||||| |  |    
T  45395661 tccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgt 45395760  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    ||| |||||| |||||||||| |||||||||| ||||||   |||||| ||||||||||    
T  45395761 gtttaacctttactcttttattcgatgtgggatatataacttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 53577418 - 53577353
Alignment:
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    |||||||||||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||||||    
T  53577418 agatgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaacaa 53577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 11661639 - 11661525
Alignment:
Q  314 gagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||| ||| ||||||||||| ||||||||||||||       ||||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  11661639 gagagagacaccacactcttacccaaaaccttaaggc-------cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataa 11661547  T
Q  413 tccacacttacacacaacaaca 434  Q
      |||||||  ||||| |||||    
T  11661546 ctcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 435
Target Start/End: Complemental strand, 39914397 - 39914241
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttca 378  Q
    ||||||||| |||||||  || |||||||||| ||| ||||||||||  |||||  ||||||||        ||||||||||||| ||||| | ||||||    
T  39914397 atcgaggctagaacaaccgcataagtgagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttca 39914298  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||  ||| ||||||| |||||| |||||||||  ||||||| |||||||||||||    
T  39914297 acctctactgttttatctgatgtgagacatataactcacacttgcacacaacaacaa 39914241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 22303663 - 22303741
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||| | ||||||||| ||||||   ||||||| ||||| ||| ||||||||||| |||||||||||||||||||||    
T  22303663 accgtctacatcgaggctagaacaatcgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggt 22303741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 41359769 - 41359847
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||| ||| ||||||||| ||||||| ||||||| |||||| ||  |||| |||||| |||||||||||||||||||||    
T  41359769 accgcccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggt 41359847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 43346701 - 43346635
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatttg 439  Q
    ||||||||||| ||| ||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  43346701 tgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaacagtttg 43346635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 51886634 - 51886564
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| |||||||||  |||||||    
T  51886634 atgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacactt 51886564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 46546371 - 46546407
Alignment:
Q  321 acatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||||||||||||||||||||||||||||||||    
T  46546371 acatcacactcttacacaaaaccttaaggcaatgggt 46546407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 11662096 - 11661941
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa-ccttaaggcaatgggt--------cctcttacttata-gatgttc 377  Q
    ||||||||| ||||||| |||||| ||||||| ||| | ||||||||| ||||| |||||||||||| |||        ||||| |||| || | |||||    
T  11662096 atcgaggctagaacaaccacacaa-tgagagagacacctcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttc 11661998  T
Q  378 aaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||| |||||||||||| ||||||| ||| |||  |||||||||| |||||||||    
T  11661997 aacctttactcttttatccaatgtggggcatttaactcacacttacatacaacaaca 11661941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 25755463 - 25755384
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||| | | ||||||||| ||||||||||| |||||| |||||||||  |||||||  |||||||||||    
T  25755463 gtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 25755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 22303963 - 22304037
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||| ||||||||| ||||||| || ||||  ||||| ||| ||||||||||  |||||||||||||||||||||    
T  22303963 tccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggcaatgggt 22304037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 431
Target Start/End: Original strand, 47964544 - 47964683
Alignment:
Q  301 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttt 391  Q
    |||| |||||||||||||| ||  ||||||||||| |||||||||||||||        ||||||||||| ||||||| |  ||||||||| |||  ||     
T  47964544 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatttc 47964643  T
Q  392 tatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||| |||||||| ||  ||||||| |||||||||    
T  47964644 tatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 50612541 - 50612607
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||||||  |||||||    
T  50612541 gtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacactt 50612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 42584907 - 42584968
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||| |||||||||||||| | ||||||| ||| |||||| |||||||||||||||||||||    
T  42584907 atggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatataa 42584968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 49336772 - 49336857
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||||||||||||| | || |||||||| ||| || ||||||||||| ||||| |||  |||||||  |||||||||||||    
T  49336772 atgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaacaat 49336857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 21832432 - 21832508
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||| | ||||||||||| ||| || ||||| |||||||||||||||  ||||||| |||| ||||    
T  21832432 gtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 22304297 - 22304249
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  22304297 tgttcaacctttactattttatccgatgtgggacatataactcacactt 22304249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 39336001 - 39336049
Alignment:
Q  306 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    ||||||| |||||| ||| ||||||||||| ||||||||||||||||||    
T  39336001 acacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 39336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 45901783 - 45901703
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcact-cttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||| | |||||||||||   | |||||||||||||||||||||||||  |||||||  |||||||||||    
T  45901783 gtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 25317290 - 25317239
Alignment:
Q  301 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 352  Q
    |||| ||||||||||||||||||  ||||| |||| ||||||||||||||||    
T  25317290 caaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaa 25317239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 3135458 - 3135536
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||   ||||||||||||||||||||    
T  3135458 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggt 3135536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 39389143 - 39389073
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||||| || || | ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  39389143 atgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcacactt 39389073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 3135158 - 3135219
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||| || ||||||||| | |||||||| || ||| ||||||||||||||||||||||||    
T  3135158 atgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataa 3135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 3135568 - 3135629
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||| || ||||||||||| || |||||||||||||  |||||||  |||||||||||    
T  3135568 tgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 7767403 - 7767476
Alignment:
Q  356 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacaca 428  Q
    ||||||||| ||||| | ||| ||||||| ||| || |||||||||||||||||||||  || |||||||||||    
T  7767403 gtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 50612451 - 50612520
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaag 348  Q
    ||||||||  |||||| | ||||||| || ||||  ||||| ||||||||||||||| ||||||||||||    
T  50612451 accgtccacgtcgaggatggaacaaccactcaagcaagagagacatcacactcttacccaaaaccttaag 50612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 9240222 - 9240142
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||||||| | |||||| | || |||  | |||||||||||| ||||||||  ||||||| |||||||||    
T  9240222 atgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Original strand, 12747878 - 12747918
Alignment:
Q  392 tatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  12747878 tatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 17731954 - 17731986
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||| |||||||||||||||||||||    
T  17731954 cacactcttactcaaaaccttaaggcaatgggt 17731986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 19033185 - 19033217
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||| |||||||||||||||||||||    
T  19033185 cacactcttactcaaaaccttaaggcaatgggt 19033217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 32462651 - 32462727
Alignment:
Q  360 tcttacttata-gatgttcaaccttc-actcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||| | |||||||||||  ||||||| || |||||||||||||||||  |||||||  |||||||||||    
T  32462651 tcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 33175749 - 33175829
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||| |||||||||||| | ||||||||||| ||| || |||| |||||| |||||||||  |||||||  ||||||||    
T  33175749 atgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 54017598 - 54017630
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||| |||||||||||||||||||||    
T  54017598 cacactcttacccaaaaccttaaggcaatgggt 54017630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 427
Target Start/End: Complemental strand, 7598754 - 7598606
Alignment:
Q  280 ccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttca 378  Q
    ||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||||  ||||| ||||||  |||||||||||||||||| || ||||||    
T  7598754 ccgtccacatcgatgcttgaacaaccacacaagtgagagagacaccacactcttaccaaaaacgttaaggttatgggtcctcttacttataaggtgttca 7598655  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacac 427  Q
    ||||| ||| ||||||| ||||||||||||||||  ||||||| |||||    
T  7598654 acctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 421
Target Start/End: Original strand, 36178611 - 36178760
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-g 371  Q
    |||||| || |||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| |    
T  36178611 cgtccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataag 36178710  T
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  36178711 gtgttcaacctttactattttatccgatgtgggacatataactcacactt 36178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 15880415 - 15880253
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-g 371  Q
    |||||| |||||||||  ||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| |    
T  15880415 cgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataag 15880316  T
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     ||||||||||| ||||||||||||||||||| ||||||||  |||||||  |||||||||||    
T  15880315 gtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 28254262 - 28254405
Alignment:
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactc 388  Q
    |||||||  |||||| |||||||||  ||||||||||| ||||||||||||||||||        |||||||||||||||| ||||||||||||| |||     
T  28254262 gaacaaccccacaagagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttactt 28254359  T
Q  389 ttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || |||||||||||||||||||||  ||||||  ||||||||||||    
T  28254360 ttctatccgatgtgggacatataagtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 6421539 - 6421375
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| |||||| || |||||||  ||||||  ||||| ||| ||||||||||| |||||||| ||||||||| ||        |||||||||||||    
T  6421539 accgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttata 6421440  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||||||||||||||||||||||||||||  |||||||   ||||||||||    
T  6421439 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 37106342 - 37106191
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  37106342 accgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttata 37106243  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  37106242 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 37106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 962752 - 962591
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||||||| |||||||  ||||  ||| ||||||||||| |||||||||||| ||        ||||||||||| ||||||     
T  962752 accgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttata 962653  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || ||||||||||| ||| || |||||||||||||||||||||  ||||||| || ||||||    
T  962652 aggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 435
Target Start/End: Original strand, 38796622 - 38796789
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcaca--ctcttacacaaaaccttaaggca--------atgggtcctcttactta 368  Q
    |||||| | ||||||||||||||||| |||||||  | ||| ||  ||||  ||||||| |||||||||||||||        |||||||||||||||||    
T  38796622 accgtcgacatcgaggcttgaacaaccacacaagcaatagagacgccacatactcttacccaaaaccttaaggcattaggtttatgggtcctcttactta 38796721  T
Q  369 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    || | ||||||||||| | | ||||||| ||||||||||||||||  ||||||| |||||||||||||    
T  38796722 taaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaacaacaa 38796789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 5542629 - 5542780
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| |||||| ||||||||||  ||||||  ||||| ||| |||||||||||  ||||||||||||||        ||||||||||||||||||     
T  5542629 accgtccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttata 5542728  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || ||||||||||| ||| |||||| |||| ||||||||||||  |||||||    
T  5542729 aggtgttcaacctttactattttattcgatatgggacatataactcacactt 5542780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 5543002 - 5543153
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| |||||||||||||||||  ||||||  | ||| ||| ||||||||||| ||||| |||||||||        |||| |||||||||||||     
T  5543002 accgtccacatcgaggcttgaacaaccgcacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttata 5543101  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || ||||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  5543102 aggtgttcaacctttactattttatcggatgtgggacatataactcacactt 5543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 31468797 - 31468914
Alignment:
Q  322 catcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataat 413  Q
    |||||||||||||| ||||||||||||||||||        ||||||||||  || |||| ||||||||| ||| ||||||||||||||||||||||||     
T  31468797 catcacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta--ta-agatattcaacctttactattttatccgatgtgggacatataac 31468893  T
Q  414 ccacacttacacacaacaaca 434  Q
     ||||||| ||||||||||||    
T  31468894 tcacacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 38796306 - 38796386
Alignment:
Q  355 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||||||| | |||||||| || ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  38796306 ggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 14745674 - 14745822
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-ga 372  Q
    ||||| ||||||||| ||||||| ||||  |  ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| |     
T  14745674 gtccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagg 14745773  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||||| ||| |||||||| |||||||||||||||  |||||||    
T  14745774 tgttcaacctttactattttatccaatgtgggacatataactcacactt 14745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 31899511 - 31899594
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | |||||||| || ||| ||||||||||||||| ||||||||  ||||||| ||||||||||||    
T  31899511 atgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 6421885 - 6421811
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat 353  Q
    |||||||| ||||||||  ||||||| |||||||| ||||| ||| ||||||||||| |||||||||||||||||    
T  6421885 accgtccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaat 6421811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 434
Target Start/End: Original strand, 15511501 - 15511661
Alignment:
Q  281 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga 372  Q
    |||||| |||||| || ||||||| |||||||  ||||| ||| ||||||||||| ||||| |||||| ||||||||        |||||||||||||      
T  15511501 cgtccacatcgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataac 15511600  T
Q  373 -tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     ||||||||||| ||||||||||||| |||| |||||||||  | ||||| ||||||||||||    
T  15511601 gtgttcaacctttactcttttatccgttgtgtgacatataa--ctcacttgcacacaacaaca 15511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 432
Target Start/End: Complemental strand, 30313309 - 30313170
Alignment:
Q  301 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttatagatgttcaaccttcactctttt 392  Q
    |||| |||||||||||||| ||  ||||||||||| ||||| ||||||||||||        |||||||| |||||||  |||||||||| |||| || |    
T  30313309 caaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataagtgttcaacctccacttttct 30313210  T
Q  393 atccgatgtgggacatataatccacacttacacacaacaa 432  Q
    |||||||||| |||||||||  ||| ||| ||||||||||    
T  30313209 atccgatgtgagacatataacacacgcttgcacacaacaa 30313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 37106078 - 37105927
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||   |||||  ||||| ||| ||||||||||| ||||| ||||||||||||        ||||| ||||||||||    
T  37106078 accgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttata 37105979  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| |||||| |||||||||||||||||  |||||||    
T  37105978 aggtgttcaacctttactattttattcgatgtgggacatataactcacactt 37105927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 41283479 - 41283630
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||| ||||| ||||||| ||||||   ||||| ||  |||||||||||  |||||||||||||||||        ||||||||||||||||    
T  41283479 accgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttata 41283578  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||| ||||||||||||  |||||||    
T  41283579 aggtgttcaacctttactattttatccgatatgggacatataactcacactt 41283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 36785670 - 36785731
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  36785670 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 40734036 - 40733873
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc-------aatgggtcctcttacttat-a 370  Q
    |||||||| |||||| |||||||||| ||||||| |||| | ||| ||||||||||| |||||| |||||||        ||| | |||||||||||| |    
T  40734036 accgtccacatcgagacttgaacaaccacacaagcgagacagacaccacactcttacccaaaactttaaggctgtaggttatgagccctcttacttataa 40733937  T
Q  371 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | |||| || ||| |||||||||| |||||||||||||||||  |||||||  |||||| ||||    
T  40733936 ggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaataaca 40733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 3672857 - 3672777
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||||| |||||| || ||||||| |||||| | ||||| ||| ||||||||||| ||||| |||||||||||||||    
T  3672857 gaaccgtccacatcgagactagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggt 3672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 429
Target Start/End: Original strand, 35580728 - 35580886
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata- 370  Q
    |||||||| ||||||||| |||||||  |||||   ||||| ||  | ||||||||| |||||||||||||||||||||       ||||| |||||||     
T  35580728 accgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaaggcaatgggtttatggtcctctcacttataa 35580827  T
Q  371 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 429  Q
    | |||||||| || | | ||||||||||||||||||||||||  ||||||| |||||||    
T  35580828 ggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 42514803 - 42514642
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||| ||||| ||  ||||||||||| ||||| ||||||||         ||||||||||||||||||     
T  42514803 accgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttata 42514704  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || ||||||||||| ||| || |||| ||||| ||||||||||  ||||||| || ||||||    
T  42514703 aggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 16542518 - 16542439
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||| ||||| | ||||||||||| ||| |||||||||||||||||| |||||  ||||||| ||||||||||||    
T  16542518 gtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 437
Target Start/End: Original strand, 36005887 - 36006050
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 372  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||  |||||| |||| ||||||||||||||||||        |||||||||||||||| |     
T  36005887 gtccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagg 36005986  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 437  Q
    |||||||| || ||| || ||| |||||||||||||||||  |||||||  ||||||||||||||    
T  36005987 tgttcaacttttact-ttctattcgatgtgggacatataactcacacttgtacacaacaacaatt 36006050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 434
Target Start/End: Complemental strand, 40733667 - 40733507
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gat 373  Q
    |||| |||||| ||||||| || ||||||| |||||| ||| ||||||||||| |||||| ||||||          ||||||||||||||||||| | |    
T  40733667 tccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggt 40733568  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||| || ||| ||||||| ||||||||||||||||  |||||||  |||||| ||||    
T  40733567 gttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaataaca 40733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 434
Target Start/End: Complemental strand, 29676954 - 29676893
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| |||||| ||||||||||||||||||||||||||||  ||||| | ||||||||||||    
T  29676954 tgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 29873563 - 29873616
Alignment:
Q  301 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||| |||||||||||||| || |||||||||||| ||||||||||||||||||    
T  29873563 caaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatg 29873616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 427
Target Start/End: Complemental strand, 1769961 - 1769889
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 427  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||| |||||||||  ||||||| |||||    
T  1769961 gtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 6713131 - 6712966
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa-ccttaaggcaat--------gggtcctcttacttat 369  Q
    |||||||| ||||||||| ||||||   || |||  ||||| ||||||||||||||| ||||| |||||| |||||        ||||||||||||||||    
T  6713131 accgtccacatcgaggctagaacaatcccataagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttat 6713032  T
Q  370 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    | | |||||||| || ||| |||||||||||||| |||||||||  |||||||  | |||||||||    
T  6713031 aaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaaca 6712966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 427
Target Start/End: Complemental strand, 7598382 - 7598225
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 369  Q
    ||||| || |||||||||||||||||  ||||||||||||| ||| || | |||||| ||||||||||||||         ||||||||||||| ||||     
T  7598382 accgttcacatcgaggcttgaacaaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttata 7598283  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 427  Q
    || |||| |||||| ||| || ||| |||||| | ||||||||| ||||||| |||||    
T  7598282 aggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 28531399 - 28531479
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||| ||||||||||||| | |||||||||||  || || |||||||||||||||||||||  ||||||| |||||||||    
T  28531399 atgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 37632682 - 37632762
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||||||| | |||  |||||| ||| ||||||||||||| ||||||||||  ||||||| |||||||||    
T  37632682 atgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 3673222 - 3673147
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| ||||||||| ||||||| |||| ||| ||||| ||||||||||||||  ||||| ||||| ||||||    
T  3673222 accgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatg 3673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 6422261 - 6422186
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||| ||||||||| ||||||| |||||||  ||||| ||| |||||||||||  ||||||||||||| ||||||    
T  6422261 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggt 6422186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 6421352 - 6421294
Alignment:
Q  376 tcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 6421780 - 6421714
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaacctt 345  Q
    |||||||| ||||||||  ||||||| |||||||| ||||| ||| ||||||||||| |||||||||    
T  6421780 accgtccacatcgaggccggaacaaccacacaagttagagagacaccacactcttacccaaaacctt 6421714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 23346390 - 23346312
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||| ||| ||||| |||||||  ||||||  ||||| |||||||||||||||  ||||||||||||| ||||||    
T  23346390 accgtccacatctaggctagaacaaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggt 23346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 31259701 - 31259789
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatg---tgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||| ||||||||||| | |||| |||||| ||||||||||||||||   || |||||||||  | ||||||||||||||||||||    
T  31259701 atgggtcatcttacttataaggtgttgaacctttactcttttatccgatgatgtgagacatataactcgcacttacacacaacaacaat 31259789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 33731793 - 33731634
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 378  Q
    ||||||||| |||||||  || |||  ||||| ||| || |||||||| ||||||||||||||||| |||        ||||||||||||| | || |||    
T  33731793 atcgaggctagaacaaccgcataagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctca 33731694  T
Q  379 accttcactcttttatccgatgtgggacatataa-tc-cacacttacacacaacaacaat 436  Q
    ||||| |||||||||||||||||| || |||||| || |||||||  |||||||||||||    
T  33731693 acctttactcttttatccgatgtgagatatataactcacacacttgaacacaacaacaat 33731634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 40163457 - 40163519
Alignment:
Q  351 aatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||| ||||||||||| | ||||||||||| ||| || |||||||||||||||||||||    
T  40163457 aatgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataa 40163519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 33561486 - 33561616
Alignment:
Q  310 aagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatg 400  Q
    |||||||||| | ||||||||||||| |||||||||||| ||        ||||||||||| ||||||| | |||| ||||| |||| || |||| ||||    
T  33561486 aagtgagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatg 33561585  T
Q  401 tgggacatataatccacacttacacacaaca 431  Q
    ||| ||||||||  ||||||| |||||||||    
T  33561586 tggaacatataactcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 40679633 - 40679794
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 369  Q
    |||||||| |||||| || |||||||  ||||||| ||||| ||  ||||||||||| ||||| ||||||||         |||||| |||||||||||     
T  40679633 accgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttata 40679732  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || ||||||||| | ||| || |||||||| ||||||||||||  |||| || |||||||||    
T  40679733 aggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 14745344 - 14745440
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||||| |||||||||||||||||||||        |||| |||||| | ||||||||||| | ||| |||||| |||||||||||||||||    
T  14745344 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataa 14745440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 406
Target Start/End: Original strand, 36178175 - 36178311
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||| | |||||||||  |||||| |||||||  |||||  || ||||||||||| ||||| |||||||||        |||||| | |||||||||     
T  36178175 accgtctacatcgaggctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttata 36178274  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggac 406  Q
    || ||||||||||| ||| ||||||||||||||||||    
T  36178275 aggtgttcaacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 5367520 - 5367442
Alignment:
Q  360 tcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 437  Q
    ||||||||||| | |||||||||||  |||||||||||||| |||||||||||   |||||||  |||||||| |||||    
T  5367520 tcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaacatcaatt 5367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 3673120 - 3673075
Alignment:
Q  389 ttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||| |||||||||||||||  ||||||| ||||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaaca 3673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 37895111 - 37895143
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||| |||||||||||||||||||||    
T  37895111 cacactcttacccaaaaccttaaggcaatgggt 37895143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 41678401 - 41678445
Alignment:
Q  308 acaagtgagagacacatcacactcttacacaaaaccttaaggcaa 352  Q
    |||||||||||| || | |||||||||| ||||||||||||||||    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaa 41678445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 36492221 - 36492389
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||  |||||||| |||| ||||        ||||||||||||||||    
T  36492221 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttata 36492320  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaattt 438  Q
     | ||||||||||| ||||||||||||||||||||||||||||  ||||||| || |||||||||||||    
T  36492321 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaacaattt 36492389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 15370253 - 15370086
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| ||||||||||| ||||||||||||||         |||||||||||||||||||    
T  15370253 accgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttata 15370154  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 437  Q
     ||||||||||||| ||| |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  15370153 agatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaacaatt 15370086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 32487543 - 32487397
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttatagatg 374  Q
    |||| ||||||||| ||||||| ||| |||  ||||| || |||||||||||| |||||||||||||||||||||        |||||||||||||| ||    
T  32487543 tccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataggtg 32487444  T
Q  375 ttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  32487443 ttcaacctttactattttatccgatgtgggacatataactcacactt 32487397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 301132 - 300948
Alignment:
Q  252 tgttaggtcattggaggagttcagagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    |||| ||||||| | ||||||| ||| ||||| ||  ||||| |||||||| | |||||||  ||||| ||| |||||||||||  |||| |||||||||    
T  301132 tgttgggtcattaggggagttcggaggaccgttcacgtcgagacttgaacagccacacaagcaagagagacaccacactcttaccaaaaatcttaaggca 301033  T
Q  352 atgggtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    |||| | ||||||||||| || | ||||||||| ||| ||||||| |||||||||||||||| ||||||||  |||||| |||||    
T  301032 atggattctcttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaaaaacaa 300948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 432
Target Start/End: Original strand, 3295349 - 3295509
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        |||||||||||||||||    
T  3295349 accgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactcttac-caaaaccttaaggcaattggtttatgggtcctcttacttata 3295447  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
     | ||||||||||| ||| ||||||||||||||| ||||||| | ||||||| ||||||||||    
T  3295448 aggtgttcaacctttactattttatccgatgtggaacatatact-cacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 40296319 - 40296483
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||| ||||||||||||        |||||||||||||    
T  40296319 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttata 40296418  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||||||||||  || ||||||||||||||||||||||||  ||||||| |||||| |||||    
T  40296419 aggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 41170777 - 41170646
Alignment:
Q  290 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaac 380  Q
    ||||||| ||||||| |||||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| ||||||||||    
T  41170777 cgaggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaac 41170678  T
Q  381 cttcactcttttatccgatgtgggacatataa 412  Q
    ||| ||| ||||||||||||||||||||||||    
T  41170677 ctttactattttatccgatgtgggacatataa 41170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 25328089 - 25327925
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 370  Q
    |||||||| || |||||| ||||||| ||||  |  ||||| ||| ||||||||||| |||||||||||||||        |||||||||||||||||||    
T  25328089 accgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttata 25327990  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||||||| || ||| ||||||||||||| ||||||||||  |||||||| |||||||||||    
T  25327989 aggtgttcaacttttactgttttatccgatgtaggacatataactcacacttagacacaacaaca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 431
Target Start/End: Original strand, 26074159 - 26074311
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat-agatgttca 378  Q
    ||||||| | || |||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||||        |||||||| ||| || ||||||    
T  26074159 atcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttca 26074258  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  26074259 acctttacttttttatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 6500604 - 6500454
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||     
T  6500604 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttata 6500505  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  6500504 aggtgttcaacctttactattttatccgatgt-ggacatataactcacactt 6500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 421
Target Start/End: Original strand, 18603120 - 18603275
Alignment:
Q  275 gagaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttact 366  Q
    |||||||||||| ||||||||| |||| || |||||||  ||||| |   ||||||||||| |||||||||||||||        |||||||||||||||    
T  18603120 gagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttact 18603219  T
Q  367 tat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||| || ||||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  18603220 tataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 18603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 26074757 - 26074602
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 378  Q
    ||||||| | || |||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||    
T  26074757 atcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttca 26074658  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||| ||||||||||||||| ||| ||||||||  |||||||  |||||| ||||    
T  26074657 acctttactcttttatccgatatggaacatataactcacacttgtacacaaaaaca 26074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 26075247 - 26075332
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||  |||||||  |||||||||||||    
T  26075247 atgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaacaacaat 26075332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 429
Target Start/End: Complemental strand, 35150141 - 35150002
Alignment:
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc-------ctcttacttata-gatgttcaaccttcactct 389  Q
    ||||||| |||| ||||||||| ||| |||||| |||| |||||||||||| |||||| |        |||||||||||| | ||||||||||| |||||    
T  35150141 gaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtctcttacttataaggtgttcaaccttgactct 35150042  T
Q  390 tttatccgatgtgggacatataatccacacttacacacaa 429  Q
    |||||||||||||||||||||||  ||||||| |||||||    
T  35150041 tttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 11417025 - 11417143
Alignment:
Q  323 atcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataat 413  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| ||||||||||||||| ||||||||     
T  11417025 atcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataa- 11417123  T
Q  414 ccacacttacacacaacaaca 434  Q
     | ||||| ||||||||||||    
T  11417124 -ctcacttgcacacaacaaca 11417143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 6224269 - 6224186
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||  |||||||  |||||||||||    
T  6224269 atgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 431
Target Start/End: Original strand, 13415769 - 13415925
Alignment:
Q  284 ccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata-gatg 374  Q
    |||| |||||||| |||||||  ||||||  ||||| ||  ||||||||||| ||||||||||||| |||        ||||||||||||||||| | ||    
T  13415769 ccatttcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtg 13415868  T
Q  375 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||| |||  |||||||||||||||||||||||  ||||||| |||||||||    
T  13415869 ttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 299597 - 299479
Alignment:
Q  325 cacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 415  Q
    |||||||||||||||||||||||||| |||        |||| ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |    
T  299597 cacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 299498  T
Q  416 acacttacacacaacaaca 434  Q
    |||||| | ||||||||||    
T  299497 acacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 38427697 - 38427560
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat-agat 373  Q
    |||| ||||||| | |||||||  ||||||||||||| || ||||||||||||||||||||||||| |        ||||||||||| ||||||| ||||    
T  38427697 tccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctc-tacttataagat 38427599  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||||| ||| || ||||| |||||||||||||||    
T  38427598 gttcaacctttacttttctatccaatgtgggacatataa 38427560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 624352 - 624272
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||||| ||||||||| |||||||  ||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||    
T  624352 gaaccgtccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggt 624272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 1028521 - 1028682
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||||||||| ||  |||||||||||  ||||||||||||  ||        |||||||||||||||||    
T  1028521 accgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttata 1028620  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
     | |||||| |||| ||| || |||||||||||||||||||||  |||||||  ||||||||    
T  1028621 aagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 12662745 - 12662821
Alignment:
Q  360 tcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  12662745 tcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacaa 12662821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 42405602 - 42405764
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| |||||||  ||||||  ||||||||  ||||||||||| |||||||||||||||        ||| ||||| |||||| |     
T  42405602 accgtccacatcgaggctagaacaaccgcacaagcaagagacac--cacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgta 42405699  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||  |||||||||||    
T  42405700 aggtgttcaacctttactattttatccgatgttggacatataactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 26074867 - 26074950
Alignment:
Q  352 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||| ||||||||   ||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  26074867 atgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 35914920 - 35914839
Alignment:
Q  354 gggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||| ||||||||||| | ||||||||||| |||||||||||||||||| |||||||||  || ||||| |||||||||||    
T  35914920 gggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 434
Target Start/End: Original strand, 3295022 - 3295184
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-ga 372  Q
    ||||| |||||||||  |||||| ||||||   ||||| ||| ||||||| ||| |||||||| ||||||||||||        | ||||||||||| |     
T  3295022 gtccacatcgaggctacaacaaccacacaaccaagagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataagg 3295121  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt--acacacaacaaca 434  Q
    ||||||||||| ||| ||||||||||||||||||||||| | |||||||  |||||||||||||    
T  3295122 tgttcaacctttactattttatccgatgtgggacatatact-cacacttgcacacacaacaaca 3295184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 6500976 - 6500826
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||| ||| |||  ||||||| ||||| ||| ||||||||||  |||||||||||||||        ||||||||| ||| ||||     
T  6500976 accgtccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttata 6500877  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  6500876 aggtgttcaacctttactattttatccgatgt-ggacatataactcacactt 6500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 27502040 - 27502191
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| ||||||| | ||||||| |||||||  ||||| ||| |||||| ||||  |||| |||||||||||        |||||||||||||||||    
T  27502040 accgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttata 27502139  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | |||| |||||| ||| |||||||| |||||||||||||||  |||||||    
T  27502140 aggtgtttaacctttactattttatccaatgtgggacatataactcacactt 27502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 412
Target Start/End: Original strand, 34753028 - 34753171
Alignment:
Q  278 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat 369  Q
    ||||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||        ||||||| ||||||||||    
T  34753028 aaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttat 34753127  T
Q  370 -agatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
     || |||||||| || ||| || ||||| |||||||||||||||    
T  34753128 aaggtgttcaacttttacttttctatccaatgtgggacatataa 34753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 36568577 - 36568732
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat-agat 373  Q
    |||| ||||||| | ||||||| ||||||| ||||||| |  |||||||||||  ||||||||||||||||        ||||| ||| |||||| || |    
T  36568577 tccacatcgaggatagaacaaccacacaagagagagacgc--cacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggt 36568674  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||| || ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  36568675 gttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 42508681 - 42508604
Alignment:
Q  356 gtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    |||||||||||||| ||||||| |||||| ||| || |||||||||||||| ||||||| |||||||  |||||||||    
T  42508681 gtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacacaacaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 41632855 - 41632775
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||||||||||| | ||||||||||| ||| || ||||||||||| |||||||||   |||||| |||||||||    
T  41632855 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 623960 - 623901
Alignment:
Q  291 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc 350  Q
    |||||| |||||||  ||||||||||||| ||| ||||||||||| ||||||||||||||    
T  623960 gaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaaggc 623901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 26590912 - 26590986
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 351  Q
    ||||| |||| ||||||| | ||||||| |||| ||||||||| ||  ||||||||||| |||||||||||||||    
T  26590912 gaaccatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggca 26590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 35150786 - 35150737
Alignment:
Q  385 actcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  35150786 actcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 35151077 - 35151028
Alignment:
Q  385 actcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  35151077 actcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 412
Target Start/End: Complemental strand, 33747927 - 33747783
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 368  Q
    |||||||||| ||| ||||| |||||||  || |||  ||||| ||| ||||||||||  ||||| |||||||||||| ||        |||||||||||    
T  33747927 gaaccgtccacatcaaggctagaacaaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttactta 33747828  T
Q  369 taga-tgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    || | | || |||||| ||| ||||||||||||||||||||||||    
T  33747827 taaagtatttaacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 15370556 - 15370478
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    |||||||| ||||||||| |||||||  |||||   ||||| ||  ||||||||||| |||||||||||||| ||||||    
T  15370556 accgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggctatgggt 15370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 36522269 - 36522319
Alignment:
Q  307 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 357  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||  |||||||    
T  36522269 cacaagtgagagagacaccacactcttacccaaaaccttaagataatgggt 36522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 9498739 - 9498800
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    ||||||||||||||||||| | ||||||||||| ||| || |||| |||||| |||||||||    
T  9498739 atgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataa 9498800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 31509692 - 31509615
Alignment:
Q  356 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    ||||||| ||||||| | || ||||||| |||| || ||||||||||| |||||||||  ||||||| ||||||||||    
T  31509692 gtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 36527126 - 36527174
Alignment:
Q  306 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||||||||| ||| ||||||||||  ||||| ||||||||||||    
T  36527126 acacaagtgagagagacagcacactcttatccaaaatcttaaggcaatg 36527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 434
Target Start/End: Original strand, 1950200 - 1950353
Alignment:
Q  290 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaac 380  Q
    ||||||| |||||||  ||||||| ||||| || |||||||||||| |||||||||||||||        |||| ||||||||||| || | ||||||||    
T  1950200 cgaggctagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaac 1950299  T
Q  381 cttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||| ||||||||||||||||||||||||||||  |||||||| || ||||||||    
T  1950300 ctttactcttttatccgatgtgggacatataactcacacttatacgcaacaaca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 2579880 - 2580041
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-t 373  Q
    |||| ||||||||| |||||||  ||||||  ||||| ||| |||| |||||| ||||||||||||||         |||||||||||||||||||   |    
T  2579880 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgt 2579979  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  2579980 gttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaacaa 2580041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 10074371 - 10074528
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 373  Q
    |||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||| |||||||||||||||        |||||||||||||||||| || |    
T  10074371 tccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 10074470  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    |||||||||| ||| || ||||||||||||||| | |||  ||||||| |||||||||    
T  10074471 gttcaacctttacttttctatccgatgtgggacctctaactcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 29518657 - 29518506
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  29518657 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 29518558  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  29518557 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 29519074 - 29518923
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  29519074 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 29518975  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  29518974 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 32741333 - 32741182
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  32741333 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 32741234  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  32741233 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 32741182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 2578447 - 2578610
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||| |||||||||||||| ||||||        |||||||||||||    
T  2578447 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 2578546  T
Q  371 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||||||||||||| ||||||||||||||  |||||||  |||||||||||    
T  2578547 aagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 2377904 - 2377742
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 373  Q
    |||| ||||||||| ||| ||| || ||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | |    
T  2377904 tccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 2377805  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||   ||||||||||||    
T  2377804 gttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaacaat 2377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 3409404 - 3409262
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 378  Q
    ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||| | ||||||    
T  3409404 atcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttca 3409305  T
Q  379 accttcactcttttatccgatgtgggacatataatccacactt 421  Q
    ||||| ||| ||||||| ||||||||||||||||  |||||||    
T  3409304 acctttactattttatctgatgtgggacatataactcacactt 3409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 5832031 - 5832172
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca-------atgggtcctcttacttata- 370  Q
    |||||| | ||||||||| ||||||| |||||||| ||||| ||| |||||| |||| ||||| |||||||         |||||||||||||||||||     
T  5832031 accgtctacatcgaggctagaacaaccacacaagtaagagagacaccacacttttacccaaaatcttaaggggtggctttatgggtcctcttacttataa 5832130  T
Q  371 gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    | ||||||||||| |||||||||||| |||||||||||||||    
T  5832131 ggtgttcaacctttactcttttatccaatgtgggacatataa 5832172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 16455061 - 16454897
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||||        ||||||| |||||||||    
T  16455061 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttata 16454962  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | ||||||||||| ||||||||||| ||||||||||| ||||  |||| ||  |||||||||||    
T  16454961 aggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaacaaca 16454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 2378280 - 2378129
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| ||| |||| ||||||  |||||||||||| |||||||        |||||||||||||    
T  2378280 accgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttata 2378181  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  2378180 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 2378129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 35210358 - 35210207
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    |||||||| ||||||||| || ||||  ||||||  | ||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||||    
T  35210358 accgtccacatcgaggctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttata 35210259  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| |||||||||||||| |||||||||  |||||||    
T  35210258 aggtgttcaacctttactattttatccgatgtgagacatataactcacactt 35210207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 14748346 - 14748493
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 370  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||    ||||||||||| ||||||||||| ||||||        |||||||||| |||||    
T  14748346 accgtccacatcgaggctagaacaaccacacaagcaagagac----cacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttata 14748441  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  14748442 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 14748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 9062438 - 9062518
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||  |||| ||| |||||| |||||    
T  9062438 gtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacatttatacacaataacaa 9062518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 435
Target Start/End: Complemental strand, 16107823 - 16107667
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 378  Q
    ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || |||| |    
T  16107823 atcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttta 16107724  T
Q  379 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    ||||| ||| ||||||||||||||  ||||||||  |||||||  ||||||||||||    
T  16107723 acctttacttttttatccgatgtgacacatataactcacacttgtacacaacaacaa 16107667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 1846902 - 1846751
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||  |||||||||||||||||||        || ||||||||||||    
T  1846902 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttata 1846803  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     | ||||||||||| ||| |||||||||||||| |||||| ||| |||||||    
T  1846802 aggtgttcaacctttactattttatccgatgtgagacatagaattcacactt 1846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 26544167 - 26544052
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||||||||||||||| ||||||||||||||         |||||||||||||||||||   ||||||||||| ||| |||||||||||||||||    
T  26544167 agagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtggga 26544068  T
Q  406 catataatccacactt 421  Q
    |||||||  |||||||    
T  26544067 catataactcacactt 26544052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 593798 - 593879
Alignment:
Q  356 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||  ||||||| ||| || |||||||    
T  593798 gtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgcactcagcaacaat 593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 3058344 - 3058238
Alignment:
Q  315 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 405  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||        |||| |||||||| | ||||||||||| ||| |||||||||||||||||    
T  3058344 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtggga 3058245  T
Q  406 catataa 412  Q
    |||||||    
T  3058244 catataa 3058238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 10073620 - 10073779
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||| ||| ||||||| |||| ||||||||| ||| ||||||||||| ||||| |||||| ||        |||| |||||||||||||     
T  10073620 accgtccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttata 10073719  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || ||||||||||| |  ||||| |||||||||||||||||||   |||||| |||||||||    
T  10073720 aggtgttcaaccttta--cttttctccgatgtgggacatataactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 10911720 - 10911558
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    |||||||| ||||||||||||||||| |||  ||| ||||| ||||||||||||||  |||||| ||||||||        ||| ||||||||||||||     
T  10911720 accgtccacatcgaggcttgaacaacaacattagtaagagagacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttata 10911621  T
Q  370 agatgttcaaccttcac-tcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || ||||||||||| || | ||||||| ||||| ||||||||||  ||||||| || ||||||    
T  10911620 aggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 10073995 - 10074156
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 369  Q
    ||||||||  |||||||| ||||||| | | ||| |||||| ||| |||||| |||| |||||||||||||||        ||||||||||||||||||     
T  10073995 accgtccacgtcgaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 10074094  T
Q  370 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 431  Q
    || |||||||| || ||| || |||||||||||||| ||||||  ||| ||| |||||||||    
T  10074095 aggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 412
Target Start/End: Original strand, 32460629 - 32460726
Alignment:
Q  324 tcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 412  Q
    |||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||    
T  32460629 tcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataa 32460726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 12085047 - 12085114
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 355  Q
    ||||||||| ||||||| |||||||||||||| ||  ||||||||||| |||||||||||||| ||||    
T  12085047 atcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggccatgg 12085114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 16108136 - 16108053
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | |||||||| || ||||||||||| ||||||| ||||||||  |||||||  |||||||||||    
T  16108136 atgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaaca 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 434
Target Start/End: Complemental strand, 16454729 - 16454565
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||  ||||| |||||||||||||||        |||||||||||||    
T  16454729 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttata 16454630  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
     | |||||||| || | ||||||||| ||||||||||| ||||  |||||||  |||||||||||    
T  16454629 aggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaacaaca 16454565  T

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Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 3409814 - 3409663
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 370  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||  | ||||||||||||        |||||||||||||    
T  3409814 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttata 3409715  T
Q  371 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
     |||||||||| || ||| ||||||| ||||||| ||||||||  |||||||    
T  3409714 agatgttcaacttttactattttatctgatgtggtacatataactcacactt 3409663  T

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Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 12071695 - 12071765
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaagg 349  Q
    ||||| || ||||||||| ||||||| |||||||||||||| ||  ||||||||||| |||||||||||||    
T  12071695 accgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaagg 12071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 2843709 - 2843634
Alignment:
Q  279 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| | | ||||||||||| ||||||||||||||||||    
T  2843709 accgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatg 2843634  T

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Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 3415593 - 3415470
Alignment:
Q  298 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactc 388  Q
    |||||||  ||||||  ||||| ||| |||||||||||  ||||||||||||||||||||        ||||||||||||| | ||||||||||| |||     
T  3415593 gaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttacta 3415494  T
Q  389 ttttatccgatgtgggacatataa 412  Q
    ||||||  ||||||||||||||||    
T  3415493 ttttatgtgatgtgggacatataa 3415470  T

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Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 2579212 - 2579273
Alignment:
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||| || ||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  2579212 tgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 412
Target Start/End: Complemental strand, 1127505 - 1127372
Alignment:
Q  288 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 378  Q
    ||||||| | || |||| ||| |||| ||||| ||  ||||||||||| ||||||||||||| |||||||        ||||||||||||| | ||||||    
T  1127505 atcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttca 1127406  T
Q  379 accttcactcttttatccgatgtgggacatataa 412  Q
    ||||| ||| ||||| ||||||||||| ||||||    
T  1127405 acctttactattttacccgatgtgggatatataa 1127372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 431
Target Start/End: Original strand, 12092514 - 12092647
Alignment:
Q  307 cacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccg 397  Q
    ||||||||||||| ||| |||| |||||| |||||||||||||||        |||| |||||| ||||||| | || ||||||| |||| || ||||||    
T  12092514 cacaagtgagagagacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccg 12092613  T
Q  398 atgtgggacatataatccacacttacacacaaca 431  Q
    ||||||||||| |||  ||| ||| |||||||||    
T  12092614 atgtgggacatctaacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 6999881 - 6999964
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||| ||||||||| |||| | |||||||| || ||| ||||||||||||| ||||||||||  |||||||| |||||| ||||    
T  6999881 atggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactcacacttatacacaataaca 6999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 2579494 - 2579571
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 354  Q
    ||||| |||| ||||||| | ||||||| |||||||  ||||| ||| || ||| |||| ||||||||||||||||||    
T  2579494 gaaccatccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatg 2579571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 522 - 684
Alignment:
Q  283 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 373  Q
    |||| ||||||||| ||| ||| || ||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | |    
T  522 tccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 621  T
Q  374 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||   ||||||||||||    
T  622 gttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaacaat 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 230 - 297
Alignment:
Q  355 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 421  Q
    |||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 1108 - 1274
Alignment:
Q  277 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 368  Q
    |||||||||| ||||||||| ||||||| ||| ||   ||||| ||| || |||||||| |||||||||||||||||||||        ||| || ||||    
T  1108 gaaccgtccacatcgaggctagaacaaccacataaacaagagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttctta 1207  T
Q  369 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    || | ||||||||||| |||||||||||| |||||||||||||||  |||||||  |||||||||||    
T  1208 taaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgtacacaacaaca 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 434
Target Start/End: Original strand, 3091 - 3153
Alignment:
Q  372 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||| | ||||||||||||    
T  3091 atgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 5850 - 5767
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  5850 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaaca 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 5469 - 5384
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 436  Q
    ||||| ||||||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  5469 atgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaacaat 5384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 5430 - 5349
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 432  Q
    ||||||||||||||||||| | ||||||||||| ||| || |||||||||||| ||||||||  ||||||| ||||||||||    
T  5430 atgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 435
Target Start/End: Complemental strand, 5133 - 4971
Alignment:
Q  282 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 372  Q
    ||||| ||||||||| || ||||  || ||| |||||| ||| ||||||||||| ||||||| ||||||||||        |||| | ||||||||| ||    
T  5133 gtccacatcgaggctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataaga 5034  T
Q  373 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 435  Q
    | || |||||| ||| || | ||||||||| |||||||||| ||||||| |||||||||||||    
T  5033 tattaaacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaacaa 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 17541 - 17624
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||| | | ||||||||||| ||| ||||||| |||||| |||||||||  ||||||| ||||||||||||    
T  17541 atgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaaca 17624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 10196 - 10279
Alignment:
Q  352 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 434  Q
    ||||||||||||||||||| | |||||||| || ||  |||||||||||||| |||||||||  |||||||   ||||||||||    
T  10196 atgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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