View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6082_low_49 (Length: 236)
Name: NF6082_low_49
Description: NF6082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6082_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 46232591 - 46232812
Alignment:
| Q |
1 |
aataacctagctgcataatagagtgcatcctcaaaaattgctctacgtacacttaaaatacatatgatcaatcaacatgtcaaatccaacaaagtatacg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46232591 |
aataacctagctgcataatagagtgcatcctcaaaaattgctctacgtacacttaaaatacatatgatcaatcaacatgtcaaatccaacaaagtatacg |
46232690 |
T |
|
| Q |
101 |
tacacgacccaactttatgatctcgacttatgaagatggcaccaaagttcaatattccatataccaaacctacacaagttcaatatgcctaaatcattta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
46232691 |
tacacgacccaactttatgatctcgacttatgaagatgggaccaaagttcaatattccatataccaaacctacacaagttcaatatgcctaaatcattga |
46232790 |
T |
|
| Q |
201 |
tcattccctccttgttcattgt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
46232791 |
tcattccctccttgttcattgt |
46232812 |
T |
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