View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6084_high_14 (Length: 238)
Name: NF6084_high_14
Description: NF6084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6084_high_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33542443 - 33542636
Alignment:
| Q |
1 |
caaaactacaaaacttgatccttaaaccaaatcttctcaagttaaacttgaaaggttaagaataaagggccaccttcattacaagaatctttcttttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33542443 |
caaaactacaaaacttgatccttaaaccaaatcttctcaagttaaacttgaaaggttaagaataaagggccaccttcattacaagaatctttcttttgct |
33542542 |
T |
|
| Q |
101 |
ttttccttgcataagaaaactgcatcttctctttaaggaccatccagacagagaaattaaatataaggaatatgaaaggtagattaaataatca |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33542543 |
ttttccttgcataagaaaactgcatcttctctttaaggaccatccagacagagaaattaaatataaggaatatgaaaggtagattaaataatca |
33542636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University