View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6085_low_7 (Length: 240)

Name: NF6085_low_7
Description: NF6085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6085_low_7
NF6085_low_7
[»] chr6 (19 HSPs)
chr6 (82-240)||(15347430-15347589)
chr6 (81-240)||(17732795-17732954)
chr6 (83-240)||(30709490-30709645)
chr6 (89-240)||(6009407-6009558)
chr6 (84-232)||(30710266-30710413)
chr6 (82-231)||(17732013-17732162)
chr6 (84-231)||(6008641-6008788)
chr6 (80-218)||(15348198-15348335)
chr6 (83-197)||(4137655-4137769)
chr6 (101-197)||(10917877-10917973)
chr6 (101-193)||(1387596-1387688)
chr6 (101-197)||(4138916-4139011)
chr6 (82-197)||(10919272-10919388)
chr6 (105-197)||(1378477-1378568)
chr6 (105-197)||(1386225-1386316)
chr6 (101-189)||(8812840-8812928)
chr6 (83-171)||(23075347-23075436)
chr6 (108-218)||(1792644-1792753)
chr6 (101-189)||(14394690-14394778)
[»] chr8 (31 HSPs)
chr8 (84-240)||(14790672-14790829)
chr8 (84-240)||(20112255-20112411)
chr8 (83-231)||(14791442-14791590)
chr8 (80-231)||(20111488-20111638)
chr8 (84-197)||(32672291-32672404)
chr8 (102-197)||(767605-767700)
chr8 (101-195)||(14864990-14865084)
chr8 (84-197)||(35123237-35123350)
chr8 (101-197)||(35124626-35124722)
chr8 (84-197)||(11680170-11680284)
chr8 (101-197)||(11681568-11681664)
chr8 (96-195)||(21190056-21190155)
chr8 (108-203)||(32673670-32673765)
chr8 (101-195)||(27242993-27243087)
chr8 (101-195)||(27254568-27254662)
chr8 (24-83)||(41120003-41120059)
chr8 (84-195)||(32219538-32219650)
chr8 (82-197)||(12128081-12128196)
chr8 (82-171)||(36469176-36469265)
chr8 (81-218)||(26544525-26544659)
chr8 (101-195)||(14866109-14866204)
chr8 (101-189)||(14053958-14054046)
chr8 (99-143)||(27241617-27241661)
chr8 (99-143)||(27247490-27247534)
chr8 (164-208)||(45105524-45105567)
chr8 (80-171)||(18809566-18809657)
chr8 (140-190)||(36338521-36338571)
chr8 (101-189)||(355945-356033)
chr8 (81-189)||(9737137-9737246)
chr8 (81-126)||(36251813-36251858)
chr8 (80-171)||(38713359-38713451)
[»] chr5 (45 HSPs)
chr5 (81-240)||(5347720-5347880)
chr5 (95-240)||(36429294-36429438)
chr5 (83-231)||(5348494-5348642)
chr5 (82-229)||(36681841-36681986)
chr5 (83-224)||(31808276-31808417)
chr5 (84-228)||(7491248-7491395)
chr5 (103-234)||(29500028-29500159)
chr5 (101-197)||(19897410-19897506)
chr5 (152-232)||(36430053-36430132)
chr5 (84-217)||(33136590-33136723)
chr5 (81-195)||(38561144-38561258)
chr5 (84-197)||(34088576-34088688)
chr5 (101-197)||(43492769-43492865)
chr5 (101-197)||(17640371-17640467)
chr5 (101-197)||(38559589-38559685)
chr5 (108-218)||(10326845-10326955)
chr5 (101-169)||(17641744-17641812)
chr5 (84-195)||(1302791-1302902)
chr5 (83-197)||(23094739-23094854)
chr5 (84-138)||(36430117-36430172)
chr5 (101-197)||(26626570-26626667)
chr5 (84-197)||(34089951-34090064)
chr5 (141-236)||(36681095-36681186)
chr5 (106-224)||(29500700-29500817)
chr5 (106-230)||(7493198-7493323)
chr5 (141-213)||(21012417-21012487)
chr5 (101-197)||(19898806-19898902)
chr5 (102-193)||(34384993-34385085)
chr5 (84-143)||(26625042-26625101)
chr5 (101-197)||(1301245-1301339)
chr5 (116-189)||(5874292-5874365)
chr5 (101-138)||(23093257-23093294)
chr5 (107-195)||(27915075-27915161)
chr5 (83-171)||(26359879-26359967)
chr5 (103-195)||(43492563-43492654)
chr5 (105-210)||(971249-971352)
chr5 (101-189)||(459487-459575)
chr5 (101-189)||(6681263-6681351)
chr5 (101-189)||(8159953-8160041)
chr5 (85-138)||(13544558-13544611)
chr5 (101-189)||(38482972-38483060)
chr5 (101-189)||(39760587-39760675)
chr5 (101-189)||(18146441-18146529)
chr5 (82-126)||(25823799-25823843)
chr5 (84-136)||(38978477-38978529)
[»] chr3 (49 HSPs)
chr3 (83-240)||(54560032-54560190)
chr3 (84-240)||(50838238-50838394)
chr3 (82-231)||(54560805-54560954)
chr3 (84-231)||(1576486-1576633)
chr3 (82-231)||(47471464-47471613)
chr3 (89-240)||(43546371-43546521)
chr3 (84-231)||(1577499-1577645)
chr3 (84-231)||(50837460-50837606)
chr3 (84-231)||(35942098-35942247)
chr3 (105-210)||(50382749-50382853)
chr3 (152-240)||(47470763-47470850)
chr3 (83-218)||(50381851-50381986)
chr3 (84-210)||(31800374-31800499)
chr3 (101-197)||(52946384-52946480)
chr3 (81-197)||(1137609-1137726)
chr3 (81-197)||(11032384-11032501)
chr3 (101-197)||(49725987-49726083)
chr3 (101-197)||(52118264-52118360)
chr3 (84-195)||(51149966-51150077)
chr3 (83-231)||(28539345-28539491)
chr3 (101-193)||(1136258-1136350)
chr3 (101-197)||(52947788-52947883)
chr3 (108-218)||(35942778-35942887)
chr3 (84-197)||(40954645-40954759)
chr3 (106-218)||(31799493-31799603)
chr3 (84-197)||(11033763-11033877)
chr3 (106-180)||(33831660-33831734)
chr3 (103-197)||(34651382-34651476)
chr3 (81-197)||(34649872-34649989)
chr3 (101-196)||(49964696-49964791)
chr3 (84-138)||(20186401-20186455)
chr3 (103-193)||(32610839-32610929)
chr3 (101-189)||(10657146-10657234)
chr3 (83-187)||(43640785-43640890)
chr3 (101-138)||(47470741-47470778)
chr3 (101-134)||(52116928-52116961)
chr3 (105-197)||(25580806-25580897)
chr3 (105-192)||(43643792-43643879)
chr3 (101-171)||(35234857-35234927)
chr3 (82-171)||(36026967-36027057)
chr3 (84-126)||(52395207-52395249)
chr3 (83-136)||(9104036-9104089)
chr3 (101-189)||(13342367-13342455)
chr3 (101-138)||(49724644-49724681)
chr3 (84-171)||(1033840-1033927)
chr3 (101-189)||(3370777-3370865)
chr3 (147-195)||(25582422-25582470)
chr3 (101-189)||(35154662-35154750)
chr3 (101-189)||(45078350-45078438)
[»] chr2 (25 HSPs)
chr2 (84-240)||(4592627-4592784)
chr2 (82-231)||(4593392-4593541)
chr2 (83-231)||(10256478-10256626)
chr2 (103-218)||(22539115-22539226)
chr2 (152-240)||(10255738-10255825)
chr2 (105-197)||(45114914-45115006)
chr2 (101-193)||(36657634-36657726)
chr2 (107-197)||(33003741-33003831)
chr2 (82-197)||(39619273-39619390)
chr2 (102-197)||(10865201-10865296)
chr2 (107-231)||(33002900-33003022)
chr2 (81-197)||(17600710-17600825)
chr2 (101-197)||(39618046-39618141)
chr2 (83-197)||(36764752-36764867)
chr2 (82-171)||(28780079-28780169)
chr2 (107-197)||(36766103-36766193)
chr2 (81-195)||(45227214-45227327)
chr2 (82-171)||(1090541-1090632)
chr2 (82-171)||(6924103-6924194)
chr2 (84-191)||(43201426-43201533)
chr2 (96-134)||(10255711-10255749)
chr2 (84-138)||(15829909-15829963)
chr2 (147-197)||(32946712-32946762)
chr2 (107-210)||(38018411-38018514)
chr2 (102-189)||(44258005-44258092)
[»] chr4 (44 HSPs)
chr4 (84-231)||(27454917-27455063)
chr4 (83-231)||(621524-621672)
chr4 (84-231)||(620470-620617)
chr4 (83-236)||(21225798-21225949)
chr4 (84-231)||(49681264-49681409)
chr4 (83-240)||(49682012-49682167)
chr4 (104-218)||(31633614-31633726)
chr4 (101-195)||(23102304-23102398)
chr4 (83-231)||(21224245-21224391)
chr4 (84-197)||(56065151-56065264)
chr4 (101-197)||(2613649-2613745)
chr4 (101-197)||(16508143-16508239)
chr4 (101-197)||(50663013-50663109)
chr4 (101-197)||(50664422-50664518)
chr4 (135-218)||(11147797-11147879)
chr4 (101-197)||(16506887-16506983)
chr4 (96-231)||(21226512-21226643)
chr4 (101-197)||(55978493-55978589)
chr4 (152-231)||(27455702-27455780)
chr4 (101-197)||(23100956-23101052)
chr4 (118-218)||(31632417-31632514)
chr4 (83-197)||(2217152-2217267)
chr4 (134-218)||(11148098-11148180)
chr4 (101-197)||(56063665-56063762)
chr4 (83-138)||(27455765-27455821)
chr4 (81-197)||(52896304-52896420)
chr4 (102-197)||(52897714-52897809)
chr4 (101-199)||(677064-677162)
chr4 (84-138)||(3880855-3880909)
chr4 (81-197)||(2215782-2215899)
chr4 (83-217)||(31779860-31779995)
chr4 (101-197)||(2615022-2615118)
chr4 (83-189)||(21917078-21917184)
chr4 (80-189)||(28255921-28256030)
chr4 (83-171)||(15030821-15030909)
chr4 (83-171)||(22525288-22525376)
chr4 (81-128)||(5865445-5865492)
chr4 (101-172)||(36077284-36077355)
chr4 (83-126)||(39334468-39334511)
chr4 (80-126)||(23520143-23520189)
chr4 (80-126)||(47309263-47309309)
chr4 (81-126)||(36871028-36871073)
chr4 (82-126)||(1862185-1862229)
chr4 (152-196)||(3880894-3880938)
[»] scaffold0102 (2 HSPs)
scaffold0102 (80-240)||(32347-32508)
scaffold0102 (84-232)||(33131-33280)
[»] chr1 (37 HSPs)
chr1 (83-240)||(47445754-47445913)
chr1 (84-231)||(47444988-47445135)
chr1 (84-231)||(36475959-36476106)
chr1 (104-231)||(27585312-27585436)
chr1 (96-236)||(36475285-36475424)
chr1 (83-197)||(4564152-4564266)
chr1 (101-197)||(11343355-11343451)
chr1 (101-197)||(11501375-11501471)
chr1 (81-190)||(786732-786843)
chr1 (81-197)||(41707005-41707122)
chr1 (106-218)||(45575952-45576061)
chr1 (101-197)||(14282798-14282894)
chr1 (101-197)||(14284194-14284290)
chr1 (84-197)||(11341969-11342083)
chr1 (84-197)||(11499988-11500102)
chr1 (81-197)||(16420115-16420231)
chr1 (81-231)||(27585974-27586122)
chr1 (84-195)||(38482469-38482580)
chr1 (83-197)||(51304736-51304851)
chr1 (83-197)||(42813229-42813343)
chr1 (102-197)||(41729856-41729951)
chr1 (84-197)||(42813796-42813910)
chr1 (81-197)||(51306292-51306410)
chr1 (141-192)||(24646463-24646514)
chr1 (84-192)||(46318760-46318869)
chr1 (82-126)||(6918845-6918889)
chr1 (141-197)||(26991038-26991094)
chr1 (83-138)||(27235212-27235267)
chr1 (108-218)||(5158677-5158785)
chr1 (80-126)||(18542330-18542376)
chr1 (80-138)||(26441924-26441982)
chr1 (84-138)||(43759553-43759607)
chr1 (101-189)||(20898532-20898620)
chr1 (101-189)||(20899286-20899374)
chr1 (101-189)||(37612849-37612937)
chr1 (81-138)||(44396463-44396520)
chr1 (155-199)||(46319143-46319187)
[»] chr7 (28 HSPs)
chr7 (81-240)||(36067293-36067450)
chr7 (84-217)||(3987239-3987371)
chr7 (105-231)||(36068096-36068220)
chr7 (83-218)||(32390892-32391025)
chr7 (106-231)||(30480683-30480808)
chr7 (101-197)||(31285488-31285584)
chr7 (84-209)||(6733017-6733141)
chr7 (101-197)||(31286866-31286962)
chr7 (81-218)||(6733140-6733275)
chr7 (106-217)||(24240589-24240699)
chr7 (83-197)||(35394712-35394827)
chr7 (123-231)||(3986569-3986674)
chr7 (81-197)||(29721083-29721197)
chr7 (84-195)||(34894195-34894307)
chr7 (84-171)||(22021769-22021856)
chr7 (101-171)||(26157290-26157360)
chr7 (84-197)||(35393163-35393277)
chr7 (97-218)||(41589198-41589315)
chr7 (80-134)||(23351675-23351729)
chr7 (82-126)||(45258917-45258961)
chr7 (102-189)||(39628393-39628480)
chr7 (103-189)||(17271802-17271888)
chr7 (80-126)||(22023048-22023094)
chr7 (81-138)||(29417148-29417206)
chr7 (84-126)||(33228637-33228679)
chr7 (83-171)||(29418148-29418237)
chr7 (132-195)||(32389978-32390038)
chr7 (83-131)||(25143343-25143391)
[»] scaffold0020 (1 HSPs)
scaffold0020 (132-217)||(1997-2080)
[»] scaffold0169 (2 HSPs)
scaffold0169 (105-218)||(26706-26817)
scaffold0169 (141-218)||(27404-27477)
[»] scaffold0380 (1 HSPs)
scaffold0380 (89-124)||(7662-7697)
[»] scaffold0006 (1 HSPs)
scaffold0006 (84-171)||(43413-43501)
[»] scaffold0044 (1 HSPs)
scaffold0044 (80-126)||(59713-59759)
[»] scaffold0128 (1 HSPs)
scaffold0128 (90-134)||(37930-37974)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 15347430 - 15347589
Alignment:
Q  82 atgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15347430 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 15347529  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15347530 tagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 15347589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 17732954 - 17732795
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17732954 aatgagtgaataggcaaaaccccccttgaaattgtaactttcgtcaaaaaaccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 17732855  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  17732854 ttagccaattacccccc-tccgtttgttttggctgttaaatgactattttttaatttcttt 17732795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 30709490 - 30709645
Alignment:
Q  83 tgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||     
T  30709490 tgagtgaataggcaaaaacccctctgaaattgtaactttcgtcaaaaatccccctgatttttaagaaacttcaaaaacgcctctgaaattatcaaacgtc 30709589  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    |||| |||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  30709590 agtc-attaccccc--tccgtttgttttggctgttaaatgactattttttaatttcttt 30709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 6009558 - 6009407
Alignment:
Q  89 aataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaa 187  Q
    |||||||||||||||||| |||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6009558 aataggcaaaaacccccttgaaattataactttcgtcaaaaactttcctgatttttaagaaacttcaaaaactcccctgaaattatcaaacgttagtcaa 6009459  T
Q  188 ttaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||| ||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  6009458 ttatccctc-tccgtttgttttggctgttaaatgactattttttaatttcttt 6009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 30710413 - 30710266
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||    
T  30710413 gagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaac-cccctgaaattgccaaacgtta 30710315  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttta 232  Q
    |||||||| ||||| || |||||||||||||||||| |||||||||||||    
T  30710314 gtcaatta-cccccatctgtttgttttggctgttaaatgactatttttta 30710266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 17732013 - 17732162
Alignment:
Q  82 atgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||  ||| |||||||| ||||||||||||  |||||||    
T  17732013 atgagtaaataggcaaaaacccccctgaaattgtagttttcgtcaaaaatccccctgatttttagaaaatttcaaaaaaccccctgaaattgacaaacgt 17732112  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  17732113 tagtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 17732162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 6008641 - 6008788
Alignment:
Q  84 gagtaaataggcaaaaac-cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||  |||||||||    
T  6008641 gagtaaataggcaaaaaaacccctgaaattgtagctttcgtcaaaaacctccctgatttttaggaaacttcaaaaagccccctgaaattgacaaacgtta 6008740  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||| ||||||| ||| ||||||||||||||||| ||||| ||||||    
T  6008741 gtcaatcacccccc-tccatttgttttggctgttaaatgactttttttt 6008788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 15348335 - 15348198
Alignment:
Q  80 taatgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 178  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||  |||||    
T  15348335 taatgagtaaataggcagaaacccccctgaaattgtagctttcgtcaaaaatcccc-tgatttttaggaaacttcaaaaaaccccctgaaattgacaaac 15348237  T
Q  179 gttagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  15348236 gttagtcaattac-ccccttccgtttgttttggctgttaa 15348198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 4137655 - 4137769
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  4137655 tgagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtct 4137754  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  4137755 gtcaattacccccct 4137769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 10917877 - 10917973
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  10917877 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 10917973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 1387688 - 1387596
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccc 193  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||| ||||||| |||| |||  |||||||||||    
T  1387688 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccttgaaattgtcaagcgtctgtcaattaccc 1387596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 4139011 - 4138916
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  4139011 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtcggtcaattacccccct 4138916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 10919388 - 10919272
Alignment:
Q  82 atgagtaaataggcaaaaac-cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    |||||||||||| |||  || ||||||||||||||||||||||||||||||| | ||| ||||   |||  |||||||||||||||||||| |||| |||    
T  10919388 atgagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 10919289  T
Q  181 tagtcaattacccccct 197  Q
      |||||||||||||||    
T  10919288 ctgtcaattacccccct 10919272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 1378477 - 1378568
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  1378477 ctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtctgtcaattacccccct 1378568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 1386225 - 1386316
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  1386225 ctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtctgtcaattacccccct 1386316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 8812928 - 8812840
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||||||||||| ||| ||||||||||||||    
T  8812928 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaaatacccccctgaaatt-tcacaacgttagtcaatt 8812840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 23075436 - 23075347
Alignment:
Q  83 tgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||  |||||| | ||||||||| |||||||||  ||||||||||  || || |||||||||  ||||||||||||||    
T  23075436 tgagtaaataggcaattacccccctaaaattgtaagtttcgtcaattacccccctgaaattaaaaaaacttcaattacccccctgaaatt 23075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 1792644 - 1792753
Alignment:
Q  108 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccc-tgaaattatcaaacgttagtcaattaccccccttccgtttgt 206  Q
    ||||||||||||| |||||||| |||| ||| ||  ||||| ||||||||||||||| | ||||| |||| ||||  |||||||  |||| || ||||||    
T  1792644 aaattgtaacttttgtcaaaaatccccttgacttcaaagaatcttcaaaaaccccccataaaattgtcaagcgttgctcaatta--ccccatctgtttgt 1792741  T
Q  207 tttggctgttaa 218  Q
    |||||| |||||    
T  1792742 tttggcagttaa 1792753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 14394690 - 14394778
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  14394690 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 14394778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 14790672 - 14790829
Alignment:
Q  84 gagtaaataggcaaaa-accccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14790672 gagtaaataggcaaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 14790771  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14790772 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 14790829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 20112411 - 20112255
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20112411 gagtgaataggcaaaaacccctctgaaattgtaactttcgtaaaaaaaacccctgatttttaagaaacttcaaaaaccccactgaaattatcaaacgtta 20112312  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgacta-ttttttaatttcttt 240  Q
    |||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||    
T  20112311 gtcaattaccccc--tccgtttgttttggctgttaaatgactatttttttaatttcttt 20112255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 14791590 - 14791442
Alignment:
Q  83 tgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||    
T  14791590 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtt 14791491  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  14791490 agtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 14791442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 20111488 - 20111638
Alignment:
Q  80 taatgagtaaataggcaaaaaccccc--tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 177  Q
    |||||||||||||||||||||| |||  || ||||||| ||||||||||||  |||||| ||||||| |||| |||||||| || ||| ||||| |||||    
T  20111488 taatgagtaaataggcaaaaactccccttgtaattgtagctttcgtcaaaa--ccccctaatttttaggaaatttcaaaaatcctcctaaaattgtcaaa 20111585  T
Q  178 cgttagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    | ||||||||||||||||| |||||||||||| |||||||| ||| | ||||||    
T  20111586 cattagtcaattacccccc-tccgtttgttttagctgttaaatgattttttttt 20111638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 32672291 - 32672404
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |    
T  32672291 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctg 32672390  T
Q  184 tcaattacccccct 197  Q
    ||||||||||||||    
T  32672391 tcaattacccccct 32672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 767700 - 767605
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  767700 cccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 767605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 14864990 - 14865084
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||    
T  14864990 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattaccccc 14865084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 35123237 - 35123350
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  |||||||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||  |    
T  35123237 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctg 35123336  T
Q  184 tcaattacccccct 197  Q
    ||||||| ||||||    
T  35123337 tcaattatccccct 35123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 35124722 - 35124626
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  35124722 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaatccccctgaaattgtcaagcgtctgtcaattacccccct 35124626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 11680170 - 11680284
Alignment:
Q  84 gagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  |||| |||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  11680170 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11680269  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  11680270 gtcaattacccccct 11680284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 11681664 - 11681568
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| | || |||  |||||||||||||||    
T  11681664 ccccctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaacccccctgaaattgttaagcgtctgtcaattacccccct 11681568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 21190056 - 21190155
Alignment:
Q  96 aaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    ||||| || |||||||| ||||||| |||||||  |||| ||| ||||||| ||||| ||||| | || |||||||||||||||||||||||||||||||    
T  21190056 aaaaaacctctgaaattataacttttgtcaaaagaccccttgaattttaaggaactttaaaaaactccatgaaattatcaaacgttagtcaattaccccc 21190155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 32673765 - 32673670
Alignment:
Q  108 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtt 203  Q
    ||||||||||||||||||||||   |||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||||||||    
T  32673765 aaattgtaactttcgtcaaaaatttccctgaattttgcaaaatatcaaaaacccccctgaaattgtcaagcgtctgtcaattaccccccttccgtt 32673670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 27243087 - 27242993
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||   |||  |||||||| ||||||||||| |||| |||  |||||||||||||    
T  27243087 ccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtccgtcaattaccccc 27242993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 27254662 - 27254568
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||   |||  |||||||| ||||||||||| |||| |||  |||||||||||||    
T  27254662 ccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtccgtcaattaccccc 27254568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 41120059 - 41120003
Alignment:
Q  24 actgtctgtaatttgtatatgtaataaataatatttaatttaatgaaaacattgactaat 83  Q
    ||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  41120059 actgtgtgtaatttgtatatgtaataaata---tttaatttaatgaaaacattgactaat 41120003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 32219538 - 32219650
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||||| |||||||||| |||||||||||| | |||| | ||||   |||||||||| |||||||||||||| |||| |||      
T  32219538 gagtaaatagtcaattacccccttgaaattgtaattttcgtcaaaaatctccctaaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtct 32219637  T
Q  183 gtcaattaccccc 195  Q
    |||||||||||||    
T  32219638 gtcaattaccccc 32219650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 12128196 - 12128081
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    |||| ||||||| |||  |||||||| |||||||||||||||||||||  | ||||| ||||   |||||||||| || ||| ||||||| |||| |||     
T  12128196 atgattaaatagtcaattaccccctggaattgtaactttcgtcaaaaattctcctgaattttgcaaaacttcaaatactcccttgaaattgtcaagcgtc 12128097  T
Q  182 agtcaattacccccct 197  Q
     |||||||||||||||    
T  12128096 tgtcaattacccccct 12128081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 36469265 - 36469176
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||  ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||| |||||||    
T  36469265 atgagtaaataggcaattaccccctgaaattgtaagtttcatcaattacccccctgaaattaagaaaacttcaaatacccccttgaaatt 36469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 26544525 - 26544659
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||| |||||| |||||| | |||||||||||| ||| || ||||| || |     ||||||||||||| |||||| ||| ||||||| ||||||||    
T  26544525 aatgagtgaataggtaaaaactctctgaaattgtaatttttgtaaaaaatcctcgc---ttttaagaaacttgaaaaacacccttgaaattgtcaaacgt 26544621  T
Q  181 tagtc-aattaccccccttccgtttgttttggctgttaa 218  Q
    ||||| ||||| ||||| || ||||||||||||| ||||    
T  26544622 tagtcaaattaaccccc-tctgtttgttttggctattaa 26544659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 14866204 - 14866109
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaac-ccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||   |||  |||||||| ||| |||||||| |||| |||  |||||||||||||    
T  14866204 ccccctgaaattgtaactttcttcaaaaatccccctgaattttgcaaaatgtcaaaaactccctctgaaattgtcaagcgtctgtcaattaccccc 14866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 14054046 - 14053958
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  14054046 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 14053958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 27241617 - 27241661
Alignment:
Q  99 aaccccctgaaattgtaactttcgtcaaaaacccccctgattttt 143  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||    
T  27241617 aaccccctaaaattgtaactttcgtcaaaaactcccctgaatttt 27241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 27247490 - 27247534
Alignment:
Q  99 aaccccctgaaattgtaactttcgtcaaaaacccccctgattttt 143  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||    
T  27247490 aaccccctaaaattgtaactttcgtcaaaaactcccctgaatttt 27247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 45105524 - 45105567
Alignment:
Q  164 ctgaaattatcaaacgttagtcaattaccccccttccgtttgttt 208  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  45105524 ctgaaattgtcaaacgttagtcaattacccccc-tccgtttgttt 45105567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 18809566 - 18809657
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||| |||   |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  18809566 taatgagtaaatagtcaatttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 18809657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 36338571 - 36338521
Alignment:
Q  140 ttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatta 190  Q
    ||||||||||||||||||||||   | ||||| ||||||||||||||||||    
T  36338571 ttttaagaaacttcaaaaacccttataaaattgtcaaacgttagtcaatta 36338521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 356033 - 355945
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  356033 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 355945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 9737246 - 9737137
Alignment:
Q  81 aatgagtaaataggcaaa-aaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  |||||||||||||||||| |||| ||||  |||||| |||  || |  |||||||||  |||||||||||||| |  ||||    
T  9737246 aatgagtaaatagtcaattaaccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaactacccccctgaaattttacaacg 9737147  T
Q  180 ttagtcaatt 189  Q
    ||| ||||||    
T  9737146 ttaatcaatt 9737137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 36251813 - 36251858
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||||||||  ||||| ||||||||||| |||||||||    
T  36251813 aatgagtaaataggcaattaccccttgaaattgtaagtttcgtcaa 36251858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 38713359 - 38713451
Alignment:
Q  80 taatgagtaaataggcaa-aaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||||  | |||||| ||||||||| |||||||||  |||| |||||  || |  |||||||||  ||||||||||||||    
T  38713359 taatgagtaaataggcaattacccccctcaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatt 38713451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 5347720 - 5347880
Alignment:
Q  81 aatgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5347720 aatgagtgaataggcaaaaacccctctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 5347819  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5347820 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 5347880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 36429294 - 36429438
Alignment:
Q  95 caaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccc 194  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36429294 caaaaaccccctgaaattgtaactttcgtcaaaaatccccctgatttttaagaaacttcaaaaacgcccctgaaattatcaaacgtcagtcaattacccc 36429393  T
Q  195 ccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    || ||||||||||||||||||||| |||||||||||||||||||||    
T  36429394 cc-tccgtttgttttggctgttaaatgactattttttaatttcttt 36429438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 5348642 - 5348494
Alignment:
Q  83 tgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||    
T  5348642 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtt 5348543  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  5348542 agtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 5348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 36681986 - 36681841
Alignment:
Q  82 atgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    |||||| ||||| |||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||  |||||||| ||||||| ||||||||    
T  36681986 atgagtgaatagacaaaaatccccttgaaattgtaactttcgttaaaaatccccctgatttttaaaaaacttc--aaacccccatgaaattgtcaaacgt 36681889  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactatttt 229  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  36681888 tagtcaattacccccc-tccgtttgttttgactgttaaatgactatttt 36681841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 31808276 - 31808417
Alignment:
Q  83 tgagtaaataggcaaaaacc-ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||| |||||||||||| | ||||||| |||||||||||||||||||   ||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  31808276 tgagtgaataggcaaaaatctccctgaatttgtaactttcgtcaaaaatttccctgatttttaagaaacttcaaaaactctcctgaaattgttaaacgtt 31808375  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgact 224  Q
    ||||||||||||||| || |||||||||||||||||| |||||    
T  31808376 agtcaattacccccc-tcagtttgttttggctgttaaatgact 31808417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 228
Target Start/End: Original strand, 7491248 - 7491395
Alignment:
Q  84 gagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacc---cccctgaaattatcaaacg 179  Q
    |||| |||||||||| |||| ||| |||||||||||||||||||||| | |||||| ||||||||||||| |||||     ||||||||||| | |||||    
T  7491248 gagtgaataggcaaacaccctcctaaaattgtaactttcgtcaaaaatcaccctgacttttaagaaacttaaaaaaaaaaacccctgaaattgtgaaacg 7491347  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattt 228  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  7491348 ttagtcaattacccccctt-cgtttgttttggctgttaaatgactattt 7491395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 29500028 - 29500159
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacc-cccctgaaattatcaaacgttagtcaattaccccccttccg 201  Q
    |||| ||||| ||||||| || ||||| |||||| ||||||||||||||||| ||||| | | | ||||| |||||||||||||||||||||| | ||||    
T  29500028 ccctcaaattataacttttgttaaaaatccccctaatttttaagaaacttcataaacctctcataaaattgtcaaacgttagtcaattacccctc-tccg 29500126  T
Q  202 tttgttttggctgttaagtgactattttttaat 234  Q
    |||||||||||| |||| |||||||||||||||    
T  29500127 tttgttttggctcttaaatgactattttttaat 29500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 19897410 - 19897506
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  19897410 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 19897506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 36430132 - 36430053
Alignment:
Q  152 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgactatttttta 232  Q
    ||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  36430132 tcaaaaacccccctgaaattgccaaacgttagtcaattac-ccccatccgtttgttttggctgttaaatgactatttttta 36430053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 33136723 - 33136590
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||| ||| | |||| ||||||||| |||||||| | |||| ||||||   ||||||||||||| ||||||||||| | ||||||||    
T  33136723 gagtgaataggcaaaaatccctttgaaagtgtaacttttgtcaaaaaactccctaatttttgcaaaacttcaaaaactcccctgaaattgttaaacgtta 33136624  T
Q  183 gtcaattaccccccttccgtttgttttggctgtta 217  Q
    |||||||||||||| ||| | ||||||||||||||    
T  33136623 gtcaattacccccc-tccatctgttttggctgtta 33136590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 38561258 - 38561144
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| ||||   |||  ||||||| |||||||||||| |||| |||    
T  38561258 aatgagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgt 38561159  T
Q  181 tagtcaattaccccc 195  Q
      |||||||||||||    
T  38561158 ctgtcaattaccccc 38561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 34088576 - 34088688
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||  |    
T  34088576 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtctg 34088674  T
Q  184 tcaattacccccct 197  Q
    ||||||||||||||    
T  34088675 tcaattacccccct 34088688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 43492865 - 43492769
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||| ||||||||| ||||   |||| ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  43492865 ccccctgaaattgtaactttcgtcaaaaccccccctgaattttgcaaaacatcaaaaatccccctgaaattgtcaagcgtctgtcaattacccccct 43492769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 17640371 - 17640467
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||||||||||| |||||||| |||    |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  17640371 ccccctgaaattgtaactttcgtcaaaaatccccctgaatttggtaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 17640467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 38559589 - 38559685
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||||||| ||||   |||  |||||||||||||||||||| |||| | |  |||||||||||||||    
T  38559589 ccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcatctgtcaattacccccct 38559685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 10326955 - 10326845
Alignment:
Q  108 aaattgtaactttcgtcaaaaacccccctgatttttaagaaactt-caaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgt 206  Q
    |||||||||||||||||||||||| || |||||||||||||||||  |||||    | ||||||| |||||| |||||||| |||||||| ||||| |||    
T  10326955 aaattgtaactttcgtcaaaaacctccatgatttttaagaaacttaaaaaaaaaatcttgaaattgtcaaacattagtcaactacccccc-tccgtctgt 10326857  T
Q  207 tttggctgttaa 218  Q
    ||||||||||||    
T  10326856 tttggctgttaa 10326845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 17641812 - 17641744
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaa 169  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||||||||||||||    
T  17641812 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaa 17641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 1302902 - 1302791
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||| |||||| | ||||   |||  ||||||| |||||||||||| |||| |||  |    
T  1302902 gagtaaatagtcaattaccctctgaaattgtaactttcgtcaaaaatccccctaaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtctg 1302803  T
Q  184 tcaattaccccc 195  Q
    ||||||||||||    
T  1302802 tcaattaccccc 1302791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 23094854 - 23094739
Alignment:
Q  83 tgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||| || ||||| ||||   |||  |||||||||||||||||||| |||| |||     
T  23094854 tgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaacctcctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgta 23094755  T
Q  182 agtcaattacccccct 197  Q
     |||||||| ||||||    
T  23094754 tgtcaattatccccct 23094739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 36430172 - 36430117
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctga 138  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  36430172 gagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctga 36430117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 26626667 - 26626570
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaa-acccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||||||| ||||   |||| ||||||  ||||||||||||| |||| |||  ||||||||| |||||    
T  26626667 ccccctgaaattgtaactttcgtcaaaaactcccctgaattttgtaaaacgtcaaaacccccccctgaaattgtcaagcgtctgtcaattacgcccct 26626570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 34090064 - 34089951
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||  || |||| ||||   |||  ||||||||||| |||||||| |||| |||  |    
T  34090064 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaattcctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtctg 34089965  T
Q  184 tcaattacccccct 197  Q
    ||||||| ||||||    
T  34089964 tcaattatccccct 34089951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 36681095 - 36681186
Alignment:
Q  141 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaattt 236  Q
    ||||| |||||||||||||||   ||||||| |||||||||||||||||||||||    |||| |||||||||||||| ||||||| |||||||||    
T  36681095 tttaaaaaacttcaaaaaccctt-tgaaattgtcaaacgttagtcaattaccccc---tcgttcgttttggctgttaaatgactatgttttaattt 36681186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 29500817 - 29500700
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccc-tgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 204  Q
    ||||||| ||| ||||||||||||| |||| | | |||||||||| ||||||||   || ||||||| ||||||||||||||||||||  |  |||||||    
T  29500817 tgaaattataattttcgtcaaaaactccccataacttttaagaaagttcaaaaaaatccttgaaattgtcaaacgttagtcaattaccttc--tccgttt 29500720  T
Q  205 gttttggctgttaagtgact 224  Q
    ||||||| |||||| |||||    
T  29500719 gttttggttgttaaatgact 29500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 7493323 - 7493198
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaaccc-ccctgatttttaagaaacttcaaaaacccccc-tgaaattatcaaacgttagtcaattaccccccttccgtt 203  Q
    |||||| ||||||||||| ||||| || |||| |||||||||||| |||||||||| ||| | ||||| |||||  ||||||||||| |  ||| | |||    
T  7493323 tgaaatcgtaactttcgtaaaaaatcctccctaatttttaagaaatttcaaaaacctcccataaaattgtcaaatattagtcaattatcttcct-ctgtt 7493225  T
Q  204 tgttttggctgttaagtgactattttt 230  Q
    |||||||| |||||| |||||||||||    
T  7493224 tgttttggttgttaaatgactattttt 7493198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 21012487 - 21012417
Alignment:
Q  141 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggct 213  Q
    ||||||||||||||||| ||| | ||||||| |||||||||| ||||||||||||  || |||||||||||||    
T  21012487 tttaagaaacttcaaaaccccacttgaaattgtcaaacgttaatcaattaccccc--tctgtttgttttggct 21012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 19898902 - 19898806
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||   |||  |||||  |||||| |||||| |||| |||  |||||||||||||||    
T  19898902 ccccctaaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaacccccccccgaaattgtcaagcgtcggtcaattacccccct 19898806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 34384993 - 34385085
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccc-tgaaattatcaaacgttagtcaattaccc 193  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||   |||| ||||||||||||| ||||||| |||| |||  |||||||||||    
T  34384993 cccctgaaattgtaattttcgtcaaaaaaccccttgaattttgcaaaacgtcaaaaaccccccttgaaattgtcaagcgtctgtcaattaccc 34385085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 26625042 - 26625101
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgattttt 143  Q
    |||||||||| |||  |||||||||||||||||||||||| |||||||| ||||| ||||    
T  26625042 gagtaaatagtcaattaccccctgaaattgtaactttcgtaaaaaaccctcctgaatttt 26625101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 1301245 - 1301339
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||   |||  |||||||   |||||||||| |||| |||  |||||||||||||||    
T  1301245 ccccttgaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaaaa--tccctgaaattgtcaagcgtctgtcaattacccccct 1301339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 5874292 - 5874365
Alignment:
Q  116 actttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||| ||| || |||| ||||||| |||||||||||||||   ||||||| ||||||||| |||||||    
T  5874292 actttcgtcataaatcctcctggtttttaaaaaacttcaaaaacccttttgaaattgtcaaacgttggtcaatt 5874365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 23093257 - 23093294
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  23093257 ccccctgaaattgtaactttcgtcaaaaaaccccctga 23093294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 27915161 - 27915075
Alignment:
Q  107 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||||| |||||||||||||||| |||  |||  ||||||||||||||||||   || | ||||| ||||| |||||||||||||||||    
T  27915161 gaaattataactttcgtcaaaaaaccc--tgacatttaagaaacttcaaaaaaatccattaaattgtcaaatgttagtcaattaccccc 27915075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 26359967 - 26359879
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||| |||  ||||||||||||||||| |||||||||  |||||| |||  || |  |||||||||  ||||||||||||||    
T  26359967 tgagtaaatagtcaattaccccctgaaattgtaattttcgtcaattacccccttgaaattaacaaaacttcaattacccccctgaaatt 26359879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 43492563 - 43492654
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||||||||||||||||||||||||||||||    | ||||   |||| || ||||||||||||||||| |||| |||  |||||||||||||    
T  43492563 ccctgaaattgtaactttcgtcaaaaaccccttgaaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgtctgtcaattaccccc 43492654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 971352 - 971249
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg--ttagtcaattaccccccttccgt 202  Q
    |||||||||||| |||||||||||| ||   |||||||||||| |||||||||| ||   ||||||| |||||||  ||| |||||||  |||||||| |    
T  971352 ctgaaattgtaattttcgtcaaaaaacct--tgatttttaagagacttcaaaaaacctattgaaattgtcaaacgttttactcaatta--ccccttccat 971257  T
Q  203 ttgttttg 210  Q
    ||||||||    
T  971256 ttgttttg 971249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 459487 - 459575
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  459487 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 459575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 6681351 - 6681263
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  6681351 ccccctgaaattgtaagtttcatcaagtacccccctgaaattaacaaaacttcaactacccccctgaaatt-tcacaacgttagtcaatt 6681263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 8159953 - 8160041
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  8159953 ccccctgaaattgtaagtttcatcaattacccccctgaaattaataaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 8160041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 13544558 - 13544611
Alignment:
Q  85 agtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||   |||||||||||||||| |||||||||  ||||||||||    
T  13544558 agtaaataggcaattgccccctgaaattgtaagtttcgtcaattacccccctga 13544611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 38482972 - 38483060
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  38482972 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 38483060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 39760587 - 39760675
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  39760587 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 39760675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 18146529 - 18146441
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  |||| |||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  18146529 ccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 18146441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 25823843 - 25823799
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||    
T  25823843 atgagtaaataggcaattacctcctgaaattgtaagtttcgtcaa 25823799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 38978529 - 38978477
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccct 136  Q
    ||||||||| ||||  ||||||||||||||||| |||||||||  ||||||||    
T  38978529 gagtaaatatgcaattaccccctgaaattgtaagtttcgtcaattacccccct 38978477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 54560032 - 54560190
Alignment:
Q  83 tgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54560032 tgagtgaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaattatcaaacgtt 54560131  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54560132 agtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 54560190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 50838394 - 50838238
Alignment:
Q  84 gagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  50838394 gagtgaataggcaaaaatccccctgaaattgtaactttcgtcaaaaacccccctaatttttaagaaacttcaaaaactcccctgaaattatcaaacgtta 50838295  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  50838294 gtcaattacccccc-tccgtttgttttggctgttaaatgactattttttaatttcttt 50838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 54560954 - 54560805
Alignment:
Q  82 atgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  54560954 atgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgt 54560855  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  54560854 tagtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 54560805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 1576486 - 1576633
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  1576486 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 1576585  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  1576586 gtcaattacccccc-tccgtttgttttggctattaaatgactttttttt 1576633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 47471613 - 47471464
Alignment:
Q  82 atgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  47471613 atgagtaaataggcaaaaaaccccttgaaattgtagctttcgtcaaaaccccccctgatttttaggaaacttcaaaaacccccctgaaattgccaaacgt 47471514  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||    
T  47471513 tagtcaattacccccc-tctgtttgttttggctgttaaatgactatttttt 47471464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 43546371 - 43546521
Alignment:
Q  89 aataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaa 187  Q
    ||||||||||||| || ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  43546371 aataggcaaaaactcctctgaaattgtaactttcgtcaaaaatcttcctgatttttaagaaacttcaaaaacccctctgaaattatcaaacgtcagtcaa 43546470  T
Q  188 ttaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  43546471 ttacccccc-tccgtttgttttggctgttaaatgacta-tttttaatttcttt 43546521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 84 - 231
Target Start/End: Complemental strand, 1577645 - 1577499
Alignment:
Q  84 gagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||    
T  1577645 gagtaaatagtcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaac-cccctgaaattgacaaacgtta 1577547  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  1577546 gtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 1577499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 50837460 - 50837606
Alignment:
Q  84 gagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||  |||||||||    
T  50837460 gagtgaataggcaaaaatccccctgaaattgtaactttcgtcaaaaacccccctgatttttagaaaatttcaaaaa-ccccctgaaattgacaaacgtta 50837558  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  50837559 gtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 50837606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 35942098 - 35942247
Alignment:
Q  84 gagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||||| | |||||||||||||||||||  ||||| ||||||||||| ||||||||||    
T  35942098 gagtgaataggcaaaactccccctaaaattgtaactttcgtcaaaaactctcctgatttttaagaaactt-taaaactcccctgaaattgtcaaacgtta 35942196  T
Q  183 gtcaattacccc--ccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||| ||||||  || ||| ||||||||||||||||| ||||||||||||    
T  35942197 gtcaactaccccctccctccatttgttttggctgttaaatgactatttttt 35942247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 50382853 - 50382749
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 204  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  50382853 ctgaaatcgtaactttcgtcaaaaactcccctgacttttaagaaacttcaaacacccccatgaaatggtcaaacgttagtcaattacccccctt-cgttt 50382755  T
Q  205 gttttg 210  Q
    ||||||    
T  50382754 gttttg 50382749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 47470763 - 47470850
Alignment:
Q  152 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  47470763 tcaaaaatccccctgaaattatcaaacgtcagtcaattacccccct-ccgtttgttttggctgttaaatgactattttttaatttcttt 47470850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 218
Target Start/End: Original strand, 50381851 - 50381986
Alignment:
Q  83 tgagtaaataggcaaaaacc--ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||||||||    ||| ||||||||| | || |||||||||||| ||||  ||||||||||||||||  |||| |||||||| ||||||||    
T  50381851 tgagtaaataggcaaaaaaaaaccccgaaattgtagcatttgtcaaaaacccctctgacatttaagaaacttcaaat-cccctctgaaattgtcaaacgt 50381949  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    |||||||||||||||| || ||||||||||||||||||    
T  50381950 tagtcaattacccccc-tctgtttgttttggctgttaa 50381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 31800499 - 31800374
Alignment:
Q  84 gagtaaataggcaaaaac-cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| ||||||||||||| |||| |||||||||||||||||||||||  ||| |||||||||||||||||| ||||| ||  | ||||| | ||||||||    
T  31800499 gagtgaataggcaaaaactcccccgaaattgtaactttcgtcaaaaaatcccatgatttttaagaaacttctaaaactcctataaaattgtgaaacgtta 31800400  T
Q  183 gtcaattaccccccttccgtttgttttg 210  Q
    |||| ||||||||  |||||||||||||    
T  31800399 gtcagttaccccc--tccgtttgttttg 31800374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 52946384 - 52946480
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  52946384 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 52946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 1137726 - 1137609
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||| ||||   |||  |||||| ||||||||||||| |||| ||    
T  1137726 aatgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaccccccctgaaattgtcaagcg 1137627  T
Q  180 ttagtcaattacccccct 197  Q
    |  |||||||||||||||    
T  1137626 tctgtcaattacccccct 1137609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 11032384 - 11032501
Alignment:
Q  81 aatgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  ||||| |||||||| ||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| ||    
T  11032384 aatgagtaaatagtcaattacccccctgaaattttaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcg 11032483  T
Q  180 ttagtcaattacccccct 197  Q
    |  |||||||||||||||    
T  11032484 tctgtcaattacccccct 11032501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 49726083 - 49725987
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  49726083 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtctgtcaattacccccct 49725987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 52118360 - 52118264
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  52118360 ccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 52118264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 51149966 - 51150077
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||| |||| ||||   |||  ||||||||||| |||||||| |||| |||  |    
T  51149966 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtctg 51150065  T
Q  184 tcaattaccccc 195  Q
    ||||||||||||    
T  51150066 tcaattaccccc 51150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 28539491 - 28539345
Alignment:
Q  83 tgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||| |||||||||||||| || | |||| || |||||  | ||||| || |||||||||||||||||||||||| ||||| | ||||| | |||||||    
T  28539491 tgagtcaataggcaaaaaccaccataaaatcgtgacttttataaaaaatcctcctgatttttaagaaacttcaaaa-cccccataaaattgttaaacgtt 28539393  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||| || |  ||||||||||||||||||||| |||| |||||||    
T  28539392 agtcaattatcctc--tccgtttgttttggctgttaaatgacaatttttt 28539345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 1136258 - 1136350
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccc 193  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||  |||  |||||||||||    
T  1136258 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcacgcgtctgtcaattaccc 1136350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 52947883 - 52947788
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||||||||||||||| |||| |||||  |||  |||||||| ||||||||||| |||| |||  |||||||||||||||    
T  52947883 ccccctgaaattgtaactttcgtcaaaaacccctctgaattttacaaaatgtcaaaaac-cccctgaaattgtcaagcgtctgtcaattacccccct 52947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 35942887 - 35942778
Alignment:
Q  108 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccct-gaaattatcaaacgttagtcaattaccccccttccgtttgt 206  Q
    ||||||||| |||||||||||| |||| ||| ||||| |||||||||||||  ||||| |||||| | |||||||||||||||||||||| ||| |||||    
T  35942887 aaattgtaattttcgtcaaaaatcccc-tgacttttatgaaacttcaaaaaaaccccttgaaattgttaaacgttagtcaattacccccc-tccatttgt 35942790  T
Q  207 tttggctgttaa 218  Q
    ||||| ||||||    
T  35942789 tttggttgttaa 35942778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 40954645 - 40954759
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaac-ccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  | ||||||||||||||||||| ||||||||  |||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  40954645 gagtaaatagtcaattatcccctgaaattgtaacttttgtcaaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 40954744  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  40954745 gtcaattacccccct 40954759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 31799493 - 31799603
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    ||||||| |||||||||||||||| | |||||| |||||||||||||  || |     |||||||| ||||| |||||||||||||||||  ||||||||    
T  31799493 tgaaattataactttcgtcaaaaaactccctgacttttaagaaacttagaagaaaaaactgaaattgtcaaatgttagtcaattaccccc--tccgtttg 31799590  T
Q  206 ttttggctgttaa 218  Q
    ||||| |||||||    
T  31799591 ttttgactgttaa 31799603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 11033877 - 11033763
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||||| |||||||||||||||||||||||  ||||||| ||||   |||  |||||||  ||||||||||| |||| |||      
T  11033877 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaatcccctgaattttgtaaaatgtcaaaaaaacccctgaaattgtcaagcgtct 11033778  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  11033777 gtcaattacccccct 11033763  T

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Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 33831660 - 33831734
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||| ||||||||||||||||| ||  ||| |||||||| ||||||||||||| | ||||||| ||||||||    
T  33831660 tgaaattataactttcgtcaaaaactcctttgacttttaagacacttcaaaaaccctcgtgaaattgtcaaacgt 33831734  T

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Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 34651476 - 34651382
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||  |||||||||||||||| ||||   |||  |||||||||||||||||||| ||||   |  |||||||||||||||    
T  34651476 ccctgaaattgtaacttttatcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagtttctgtcaattacccccct 34651382  T

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Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 34649872 - 34649989
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  ||||||| ||||||||||||||||| |||||| ||||||| ||||   |||  ||||||| | |||||||||| |||| ||    
T  34649872 aatgagtaaatagtcaattacccccttgaaattgtaactttcgtaaaaaactcccctgaattttgcaaaatgtcaaaaatctccctgaaattgtcaagcg 34649971  T
Q  180 ttagtcaattacccccct 197  Q
    |  |||||||| ||||||    
T  34649972 tctgtcaattatccccct 34649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 49964696 - 49964791
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccc 196  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||   |||| |||||| |||| || ||||| |||| |||  ||||||||| ||||    
T  49964696 ccccctgaaattgtaactttcgttaaaaaaccccctgaattttgcaaaacgtcaaaaccccctctaaaattgtcaagcgtctgtcaattactcccc 49964791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 20186401 - 20186455
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    ||||||||||||||  ||||||||||||||||| |||||||||  ||||||||||    
T  20186401 gagtaaataggcaattaccccctgaaattgtaagtttcgtcaattacccccctga 20186455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 32610839 - 32610929
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccc 193  Q
    |||| ||||||||| |||||||||||||| |||||| ||||   |||| |||||||| ||| ||||||| |||| |||  |||||||||||    
T  32610839 ccctaaaattgtaattttcgtcaaaaacctccctgaattttgcaaaacgtcaaaaactcccatgaaattttcaagcgtctgtcaattaccc 32610929  T

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Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 10657234 - 10657146
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  10657234 ccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 10657146  T

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Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 43640785 - 43640890
Alignment:
Q  83 tgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  ||||| || |||||||| |||||||||||||  ||||||| ||||   ||||||||||||   |||||||||| ||||||||     
T  43640785 tgagtaaatagtcaattaccccactaaaattgtagctttcgtcaaaaaaacccctgaattttgcaaaacttcaaaaagaaccctgaaattgtcaaacgtc 43640884  T
Q  182 agtcaa 187  Q
    ||||||    
T  43640885 agtcaa 43640890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 47470741 - 47470778
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47470741 ccccctgaaattgtaactttcgtcaaaaatccccctga 47470778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 52116928 - 52116961
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaaccccc 134  Q
    ||||||||||||||||||||||||||||||||||    
T  52116928 ccccctgaaattgtaactttcgtcaaaaaccccc 52116961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 25580806 - 25580897
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||   || ||| ||||   |||| || ||||||||||||||||| |||| |||  |||||||||||||||    
T  25580806 ctgaaattgtaactttcgtcaaaaatttccttgaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgtctgtcaattacccccct 25580897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 43643879 - 43643792
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacc 192  Q
    ||||||||||| |||| |||||||| || ||||| ||||   |||||||||||||| |  ||||||| |||||| |||||||| ||||    
T  43643879 ctgaaattgtagcttttgtcaaaaatcctcctgaattttgcaaaacttcaaaaacctctttgaaattgtcaaacattagtcaaatacc 43643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 35234857 - 35234927
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  35234857 ccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 35234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 36026967 - 36027057
Alignment:
Q  82 atgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||  ||||||||||  || |  |||||||||  | ||||||||||||    
T  36026967 atgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaatt 36027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 52395249 - 52395207
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||||| |||| ||||||||||||| |||||||||    
T  52395249 gagtaaataggcaataacctcctgaaattgtaagtttcgtcaa 52395207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 9104089 - 9104036
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccct 136  Q
    ||||||||||| |||  ||||||||||||||||| |||||||||  ||||||||    
T  9104089 tgagtaaatagtcaattaccccctgaaattgtaagtttcgtcaattacccccct 9104036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 13342455 - 13342367
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  13342455 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 13342367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 49724644 - 49724681
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  49724644 ccccctgaaattgtaattttcgtcaaaaaccccactga 49724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 1033927 - 1033840
Alignment:
Q  84 gagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||  | ||||||||| || |  |||||||||  ||||||||||||||    
T  1033927 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaatta-ccccctgatattaacaaaacttcaattacccccctgaaatt 1033840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 3370865 - 3370777
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    ||||||||||||||    
T  3370865 ccccctgaaattgtaaatttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcttaacgttagtcaatt 3370777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 25582470 - 25582422
Alignment:
Q  147 aaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||| |||||||||||||||||||| |||| |||  |||||||||||||    
T  25582470 aaacgtcaaaaacccccctgaaattgtcaagcgtctgtcaattaccccc 25582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 35154750 - 35154662
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||| ||  |||||||||||||| |  ||||||||||||||    
T  35154750 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaactttaattacccccctgaaattttacaacgttagtcaatt 35154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 45078350 - 45078438
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||||| |||| || |  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  45078350 ccccctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 45078438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 4592627 - 4592784
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4592627 gagtgaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaattatcaaacgtta 4592726  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4592727 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 4592784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 4593541 - 4593392
Alignment:
Q  82 atgagtaaataggcaaaaac--cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    |||||||||||||||||||   ||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||    
T  4593541 atgagtaaataggcaaaaaaaacccctgaaaatgtagctttcgtcaaaaaccccc-tgatttttaggaaacttcaaaaaaccccctgaaattgacaaacg 4593443  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    | ||||||||| ||||| ||||||||||||||||||||| ||||| ||||||    
T  4593442 tcagtcaattatccccc-tccgtttgttttggctgttaaatgactttttttt 4593392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 10256626 - 10256478
Alignment:
Q  83 tgagtaaataggcaaaaac--cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||||||||   ||| |||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||||  |||||||    
T  10256626 tgagtaaataggcaaaaaaaacccttgaaattgtagctttcgtcaaaaacccccctgatttctaggaaacttcaaaaac-cccctgaaattgccaaacgt 10256528  T
Q  181 tagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| | |||||||||||||||| |||| ||||| ||||||    
T  10256527 tagtcaattaccccgc-tccgtttgttttggctattaaatgactttttttt 10256478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 22539226 - 22539115
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgt 202  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||   |||||    
T  22539226 ccctgaaattgtaactttcgtcaagaaccccc-tgacttttaaaaaacttcaaaaaaccccatgaaattgtcaaacgttagtcaattacccc---tccgt 22539131  T
Q  203 ttgttttggctgttaa 218  Q
     |||||||||||||||    
T  22539130 atgttttggctgttaa 22539115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 10255738 - 10255825
Alignment:
Q  152 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10255738 tcaaaaagccccttgaaattatcaaacgtcagtcaattacccccct-ccgtttgttttggctgttaaatgactattttttaatttcttt 10255825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 45115006 - 45114914
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| | ||||||| |||||||||||| ||||||||||||    
T  45115006 ctgaaattgtaactttcgtcaaaaacccccttgacttttaagaaacttcaaaacccctcatgaaattgtcaaacgttagttaattacccccct 45114914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 36657726 - 36657634
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccc 193  Q
    |||||| |||||||||||||||||||||||  |||||| ||||   ||||||||||||||| |||||||||||||||||| |||||| |||||    
T  36657726 ccccctaaaattgtaactttcgtcaaaaacttccctgaattttgcaaaacttcaaaaaccctcctgaaattatcaaacgtcagtcaaataccc 36657634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 33003831 - 33003741
Alignment:
Q  107 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||| |||||  || |||||||||||||||||| |||||  ||| ||||||| ||||||||| |||||||||||||||    
T  33003831 gaaattgtaactttcgtaaaaaaaaccgctgatttttaagaaacttaaaaaattcccttgaaattgtcaaacgttggtcaattacccccct 33003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 39619390 - 39619273
Alignment:
Q  82 atgagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaa-aacccccctgaaattatcaaacg 179  Q
    |||||||||||| |||  |||| |||||||||||| |||||||||||||||||||||| ||||   |||||| ||| | ||||||||||||| |||| ||    
T  39619390 atgagtaaatagtcaattaccctcctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaactttaaataccccccctgaaattgtcaagcg 39619291  T
Q  180 ttagtcaattacccccct 197  Q
    || |||||||||||||||    
T  39619290 tttgtcaattacccccct 39619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 10865201 - 10865296
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||   |||  |||||||||| |||||||||||||| |||  |||||||||||||||    
T  10865201 cccctgaaattgtaacttttgtcaaaaaccctcctgaattttgcaaaatgtcaaaaaccctcctgaaattatcaagcgtctgtcaattacccccct 10865296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 33002900 - 33003022
Alignment:
Q  107 gaaattgtaactttcgtcaaaaacccccct-gatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    ||||||||||||||| | |||||  ||||| |||||||||||||||||||||| | |  ||||||| |||||||||||| ||||||||||  ||||||||    
T  33002900 gaaattgtaactttcataaaaaaaaccccttgatttttaagaaacttcaaaaa-ctcgatgaaattgtcaaacgttagttaattaccccc--tccgtttg 33002996  T
Q  206 ttttggctgttaagtgactatttttt 231  Q
    |||||| |||||| ||| | ||||||    
T  33002997 ttttggatgttaaatgattttttttt 33003022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 17600825 - 17600710
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||| |||  ||| |||||||||||| ||||| ||||||||| || ||| ||||   ||||||||||||| | | ||||||| ||||||||    
T  17600825 aatgagtaaatagtcaattacctcctgaaattgtagctttcatcaaaaacctcc-tgaattttgcaaaacttcaaaaactcacgtgaaattgtcaaacgt 17600727  T
Q  181 tagtcaattacccccct 197  Q
     |||||| |||||||||    
T  17600726 cagtcaaatacccccct 17600710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 39618046 - 39618141
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||| ||||||||||||| |||||| | ||||   |||||||||| | |||||||||||| |||| |||  |||||||||||||||    
T  39618046 ccccctgaaattgtagctttcgtcaaaaaaccccctaaattttgcaaaacttcaaata-ccccctgaaattgtcaagcgtctgtcaattacccccct 39618141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 36764752 - 36764867
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaa-cccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  |||||| ||||||||||||||||||||||| |||||| | ||||   |||| ||||||| ||||||  ||||| |||| |||     
T  36764752 tgagtaaatagtcaattaccccccgaaattgtaactttcgtcaaaaatcccccttaattttgcaaaacgtcaaaaacccccccaaaaattgtcaagcgtc 36764851  T
Q  182 agtcaattacccccct 197  Q
     |||||||||||||||    
T  36764852 tgtcaattacccccct 36764867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 28780079 - 28780169
Alignment:
Q  82 atgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||  ||||||||||  || |  |||||||||| ||||||||||||||    
T  28780079 atgagtaaataggcaactacccccctgaaattgtaagtttcgtcaattacccccctgaaattaagaaaacttcaaatacccccctgaaatt 28780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 36766193 - 36766103
Alignment:
Q  107 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||| ||||||||||||||| | |||||| ||||   |||| |||||| ||||||||||||| |||| |||  ||||||||| |||||    
T  36766193 gaaattgcaactttcgtcaaaaatctccctgaattttgcaaaacgtcaaaatcccccctgaaattgtcaagcgtctgtcaattacacccct 36766103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 45227214 - 45227327
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||| |||  | || | ||||||||||||||||||||||| |||| ||| ||||   |||| || ||||||||||||||||| |||| |||    
T  45227214 aatgagtaaatagtcaattatcctccgaaattgtaactttcgtcaaaaaaccccttgaattttgtaaaacgtc-aaaacccccctgaaattgtcaagcgt 45227312  T
Q  181 tagtcaattaccccc 195  Q
      |||||||| ||||    
T  45227313 ctgtcaattatcccc 45227327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 1090541 - 1090632
Alignment:
Q  82 atgagtaaataggcaaaaacccc--ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||  |||||  |||||||||||| |||||||||  |||||| |||  || |  |||||||||| ||||||||||||||    
T  1090541 atgagtaaataggcaatgaccccccctgaaattgtaagtttcgtcaattacccccatgaaattaagaaaacttcaaatacccccctgaaatt 1090632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 6924103 - 6924194
Alignment:
Q  82 atgagtaaataggcaaaaacccc--ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||||  |||||  |||||||||||| |||||||||  || |||||||  || |  |||||||||| ||||||||||||||    
T  6924103 atgagtaaataggcaactaccccccctgaaattgtaagtttcgtcaattactcccctgaaattaagaaaacttcaaatacccccctgaaatt 6924194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 43201533 - 43201426
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||| |||||||||||  |||||||||||  ||| ||||   |||| ||||||| || ||||||||| |||| |||  |    
T  43201533 gagtaaatagtcaattaccccctgatattgtaacttttttcaaaaacccctatgaattttgcaaaacgtcaaaaaacctcctgaaattgtcaagcgtctg 43201434  T
Q  184 tcaattac 191  Q
    ||||||||    
T  43201433 tcaattac 43201426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 10255711 - 10255749
Alignment:
Q  96 aaaaaccccctgaaattgtaactttcgtcaaaaaccccc 134  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  10255711 aaaaaacccctgaaattgtaactttcgtcaaaaagcccc 10255749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 15829909 - 15829963
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||| |||  ||||||||||||||||| |||||||||  ||||||||||    
T  15829909 gagtaaatagacaattaccccctgaaattgtaagtttcgtcaattacccccctga 15829963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 32946712 - 32946762
Alignment:
Q  147 aaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||| |||| ||||||| |||||||| |||||| |||||||||    
T  32946712 aaacttcaaaaaaccccttgaaattgtcaaacgtcagtcaaatacccccct 32946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 38018411 - 38018514
Alignment:
Q  107 gaaattgtaacttt-cgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    |||||||||||||| |||||||| |    |||| ||||| |||| |||||||||   | ||||||  |||||||||||||||||| |||||||||||||     
T  38018411 gaaattgtaacttttcgtcaaaatcattactgacttttacgaaatttcaaaaactttcatgaaatcgtcaaacgttagtcaatta-cccccttccgttta 38018509  T
Q  206 ttttg 210  Q
    |||||    
T  38018510 ttttg 38018514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 44258005 - 44258092
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    ||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  44258005 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 44258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 27454917 - 27455063
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| ||    
T  27454917 gagtgaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttgaaaaacccctttgaaattatcaaacgtcag 27455016  T
Q  184 tcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  27455017 tcaattacccccc-tccgtttgttttggctgttaaatgactatttttt 27455063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 621672 - 621524
Alignment:
Q  83 tgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  621672 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtt 621573  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  621572 agtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 621524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 620470 - 620617
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  620470 gagtaaataggcaaaaacccctctgaaattgtagttttcgtcaaaaatccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 620569  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  620570 gtcaattacccccc-tccgtttgttttggctgttaaatgactttttttt 620617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 21225798 - 21225949
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||| |  | ||||||||||||||||| |||||| ||  ||||||| |||||| |||    
T  21225798 tgagtgaataggcaaaacccacctgaaattgtaactttcgtcaaaaatcttcttgatttttaagaaactttaaaaacacctttgaaattgtcaaacctta 21225897  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactattttttaattt 236  Q
    ||||||||||| |  ||||||||||||||||||||| |||||||||||||||||    
T  21225898 gtcaattaccctc--tccgtttgttttggctgttaaatgactattttttaattt 21225949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 49681264 - 49681409
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||||||||||| |||  |||||||| |||| ||||||||| |||||||||||||  |||||||||||||||| |||||||| ||||||| |||    
T  49681264 gagtaaataggcaaaaactcccctaaattgtagcttttgtcaaaaactcccctgatttttagaaaacttcaaaaacccctctgaaattgtcaaacgctag 49681363  T
Q  184 tcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    | ||||| ||||  ||||||||||||||||||||| ||||| ||||||    
T  49681364 ttaattatcccc--tccgtttgttttggctgttaaatgactttttttt 49681409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 49682167 - 49682012
Alignment:
Q  83 tgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||| |||||||||||| || || |||||||||||||||||||||||   |||| |||||||||||||||||||||  |||||||||||||||| ||||    
T  49682167 tgagtgaataggcaaaaatcctcttgaaattgtaactttcgtcaaaaaattccctaatttttaagaaacttcaaaaa-tcccctgaaattatcaatcgtt 49682069  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||  ||| ||| |||||||| |||| | | |||||||||||||||||    
T  49682068 agtcaattaccccc--tccatttattttggctattaaataattattttttaatttcttt 49682012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 31633726 - 31633614
Alignment:
Q  104 cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtt 203  Q
    |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||| | ||||| |||||| |||||| |||||||||  ||||||    
T  31633726 cctgaaattggaagtttcgtcaaaaacccccttaatttttaagaaacttcaaaaacccccataaaattgtcaaacattagtccattaccccc--tccgtt 31633629  T
Q  204 tgttttggctgttaa 218  Q
    ||||| |||||||||    
T  31633628 tgtttgggctgttaa 31633614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 23102398 - 23102304
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    ||||||||||||||| |||||||||||||||||||||| ||||   |||||||||| |||||||||||||| |||| |||| |||||||||||||    
T  23102398 ccccctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtttgtcaattaccccc 23102304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 21224245 - 21224391
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||| |||||||||||  | |||||||||||||||||||| ||||| |   ||||||||||| ||| ||||||||| ||  ||||||| |||||| |||    
T  21224245 tgagtgaataggcaaaactcgcctgaaattgtaactttcgtaaaaaatctttctgatttttaaaaaatttcaaaaacacctatgaaattgtcaaacctta 21224344  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||  ||||  ||||||| ||||||||||||| ||||||||||||    
T  21224345 gtcaatt--cccctctccgtttattttggctgttaaatgactatttttt 21224391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 56065264 - 56065151
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| |||| |||  |    
T  56065264 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctg 56065165  T
Q  184 tcaattacccccct 197  Q
    ||||||||||||||    
T  56065164 tcaattacccccct 56065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 2613649 - 2613745
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  2613649 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 2613745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 16508239 - 16508143
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  16508239 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 16508143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 50663013 - 50663109
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  50663013 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 50663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 50664518 - 50664422
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  50664518 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 50664422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 11147797 - 11147879
Alignment:
Q  135 ctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    |||| |||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  11147797 ctgacttttaagaaacttcaaaaattcccttgaaattgtcaaacgttagtcaattacccccc-tccgtttgttttggctgttaa 11147879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 16506887 - 16506983
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  16506887 ccccctgaaattgtaactttcgtcaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 16506983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 21226643 - 21226512
Alignment:
Q  96 aaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    ||||| ||||| ||||||||||||| |||||||| || ||||| |||||||||| |||||||| ||| |||||||| | |||| ||||||||||||||||    
T  21226643 aaaaaacccctcaaattgtaactttagtcaaaaa-cctcctgacttttaagaaatttcaaaaa-ccctctgaaattgttaaacattagtcaattaccccc 21226546  T
Q  196 cttccgtttgttttggctgttaagtgactatttttt 231  Q
      |||||||||||||||| |||| ||| | ||||||    
T  21226545 --tccgtttgttttggctattaaatgattttttttt 21226512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 55978493 - 55978589
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||| ||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  55978493 ccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 55978589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 27455780 - 27455702
Alignment:
Q  152 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  27455780 tcaaaaacccccctgaaattgccaaatgttagtcaattacccccc-tccgtttgttttggcagttaaatgactatttttt 27455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 23100956 - 23101052
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||| |||||||| |||||||||||||||||||||| ||||   |||||||||| |||||||| ||||| |||| |||  |||||||||||||||    
T  23100956 ccccctaaaattgtacctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctaaaattgtcaagcgtctgtcaattacccccct 23101052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 31632417 - 31632514
Alignment:
Q  118 tttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgtta 217  Q
    |||||||||||||  || |||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||| ||||||||||| ||||||||    
T  31632417 tttcgtcaaaaacttccatgatttttaagaaacttc-aaaaccctcct-aaattgtcaaacgttagtcaattgcccccc-tccgtttgtttgggctgtta 31632513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 2217267 - 2217152
Alignment:
Q  83 tgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||||| || ||| ||||   |||  |||||||||||||||||||| |||| |||     
T  2217267 tgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacctccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 2217168  T
Q  182 agtcaattacccccct 197  Q
     |||||||||||||||    
T  2217167 tgtcaattacccccct 2217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 11148180 - 11148098
Alignment:
Q  134 cctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    ||||| ||||||||||||||||||||||   ||||||| ||||| |||||||||||||||||  |||||||||||||| ||||||    
T  11148180 cctgacttttaagaaacttcaaaaacccttatgaaattgtcaaatgttagtcaattaccccc--tccgtttgttttggttgttaa 11148098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 56063665 - 56063762
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttc-aaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||| |||||||||||||||| ||||   |||  || |||||||||||||||||| |||| |||  |||||||||||||||    
T  56063665 ccccctgaaattgtaactttcatcaaaaacccccctgaattttgcaaaatgtcaaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 56063762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 27455821 - 27455765
Alignment:
Q  83 tgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  27455821 tgagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctga 27455765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 52896304 - 52896420
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||| |||  ||||  |||||||||||||||||||||||||||| |||| ||||   |||  |||||||||| | ||||||| |||| |||    
T  52896304 aatgagtaaatagtcaattaccctttgaaattgtaactttcgtcaaaaacccctctgaattttgtaaaatgtcaaaaaccctcttgaaattgtcaagcgt 52896403  T
Q  181 tagtcaattacccccct 197  Q
      |||||||||||||||    
T  52896404 ctgtcaattacccccct 52896420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 52897809 - 52897714
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||  || |||||||| |||| |||  |||||||||||||||    
T  52897809 cccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaacctctgaaattgtcaagcgtcggtcaattacccccct 52897714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 677064 - 677162
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttc 199  Q
    |||||||||||||||||||||||||||||||| ||||| ||||   |||  | |||||||||  ||||||| |||| |||  |||||||||||||||||    
T  677064 ccccctgaaattgtaactttcgtcaaaaaccctcctgaattttgcaaaatgtaaaaaacccctatgaaattgtcaagcgtctgtcaattaccccccttc 677162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 3880855 - 3880909
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  3880855 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccctga 3880909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 2215782 - 2215899
Alignment:
Q  81 aatgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  |||||| | ||||||||||||||||||||||||| | ||| ||||   |||  ||||||||||||||||||||  ||| ||    
T  2215782 aatgagtaaatagtcaattacccccctaaaattgtaactttcgtcaaaaaccctcatgaattttgcaaaatgtcaaaaacccccctgaaattgccaagcg 2215881  T
Q  180 ttagtcaattacccccct 197  Q
    |  |||||||||||||||    
T  2215882 tctgtcaattacccccct 2215899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 31779995 - 31779860
Alignment:
Q  83 tgagtaaataggcaaaaaccccct--gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||| ||||||| |||| |||||  |||||||||||||| ||||||||| |   ||||||||   |||||| |||||| || || ||||| | ||||||    
T  31779995 tgagtgaataggcgaaaatcccctctgaaattgtaacttttgtcaaaaactctattgatttttgcaaaactttaaaaactcctctaaaattgttaaacgt 31779896  T
Q  181 tagtcaattaccccccttccgtttgttttggctgtta 217  Q
    |||||||||||||||||| | | ||||||||||||||    
T  31779895 tagtcaattacccccctt-catctgttttggctgtta 31779860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 2615118 - 2615022
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||  | | ||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  2615118 ccccctgaaattgtaactttcgtcaaaaaaacacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 2615022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 21917078 - 21917184
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgtt 181  Q
    ||||||||||| |||   |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||||||||||| ||| ||||||    
T  21917078 tgagtaaatagtcaatttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaaatacccccctgaaatt-tcacaacgtt 21917176  T
Q  182 agtcaatt 189  Q
    ||||||||    
T  21917177 agtcaatt 21917184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 28256030 - 28255921
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aac 178  Q
    |||||||||||||| |||   |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||    
T  28256030 taatgagtaaatagtcaatttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaac 28255932  T
Q  179 gttagtcaatt 189  Q
    |||||||||||    
T  28255931 gttagtcaatt 28255921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 15030821 - 15030909
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||  ||||||||||||||||| |||| ||||  ||||| ||||  || |  |||||||||  ||||||||||||||    
T  15030821 tgagtaaataggcaattaccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatt 15030909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 22525376 - 22525288
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||  | ||||||||||||||| |||||||||  ||| ||||||  || |  |||||||||  ||||||||||||||    
T  22525376 tgagtaaataggcaattatcccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccctgaaatt 22525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 5865445 - 5865492
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaa 128  Q
    ||||||| ||||||||||| |||| | |||||||||||||||||||||    
T  5865445 aatgagtgaataggcaaaacccccttaaaattgtaactttcgtcaaaa 5865492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 36077355 - 36077284
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatta 172  Q
    |||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  |||||||||||||||    
T  36077355 ccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatta 36077284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 39334511 - 39334468
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||||||  ||||||||||||||||| |||||||||    
T  39334511 tgagtaaataggcaattaccccctgaaattgtaagtttcgtcaa 39334468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 23520189 - 23520143
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||||  ||||||||||||||||| |||| ||||    
T  23520189 taatgagtaaataggcaattaccccctgaaattgtaagtttcatcaa 23520143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 47309309 - 47309263
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||||| |||  ||||||||||||||||| |||||||||    
T  47309309 taatgagtaaatagtcaattaccccctgaaattgtaagtttcgtcaa 47309263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 36871073 - 36871028
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||||||||  ||||||||||||||| | |||||||||    
T  36871073 aatgagtaaataggcaattaccccctgaaattgtgagtttcgtcaa 36871028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 1862229 - 1862185
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    |||||||||||| |||  ||||||||||||||||| |||||||||    
T  1862229 atgagtaaatagtcaattaccccctgaaattgtaagtttcgtcaa 1862185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 3880894 - 3880938
Alignment:
Q  152 tcaaaaacccccctgaaattatcaaacgttagtcaattacccccc 196  Q
    |||||||||||||||||||| |||| |||  ||||||||||||||    
T  3880894 tcaaaaacccccctgaaattgtcaagcgtcggtcaattacccccc 3880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 80 - 240
Target Start/End: Original strand, 32347 - 32508
Alignment:
Q  80 taatgagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaaccccc-ctgaaattatcaaa 177  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  32347 taatgagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaaatccctctgatttttaagaaacttcaaaaaccccctcggaaattatcaaa 32446  T
Q  178 cgttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  32447 cgttagtcaataacccctc-tccgtttgttttggctgttaaatgactattttttaatttcttt 32508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 33280 - 33131
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttc-aaaaacccccctgaaattatcaaacgtt 181  Q
    |||||||||||||||||   ||| ||||||||| ||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  33280 gagtaaataggcaaaaaaaaccttgaaattgtagctttcgtaaaaaactcccctgatttttaggaaacttccaaaaacccccctgaaattgtcaaacgtt 33181  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaagtgactatttttta 232  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  33180 agtcaattacccccc-tccgtttgttttggctgttaaatgactatttttta 33131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 47445913 - 47445754
Alignment:
Q  83 tgagtaaataggcaaaaaccccct--gaaattgtaactttcgtcaaaaa-cccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||| ||||||||||||||||||  |||||||||| |||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  47445913 tgagtgaataggcaaaaaccccctctgaaattgtaattttcatcaaaaatcccccctgatttttaagaaacttcaaaaaaacccctgaaattatcaaacg 47445814  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||    
T  47445813 ttagtcaattacccccc-tccatttgttttggttgttaaatgactattttttaatttcttt 47445754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 47444988 - 47445135
Alignment:
Q  84 gagtaaataggcaaaa-accccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| ||||||||||    
T  47444988 gagtaaatagccaaaaaaccccctgaaattgtagctttcgtcaaaaccccccctgattttcaggaaacttcaaaaacccccatgaaattgtcaaacgtta 47445087  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| ||||||| ||||||||||||| ||| | ||||||    
T  47445088 gtcaattacccccc-tccgtttattttggctgttaaatgattttttttt 47445135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 231
Target Start/End: Complemental strand, 36476106 - 36475959
Alignment:
Q  84 gagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| ||   || | |||||||||||||||||||||||| ||||||| | ||||||||    
T  36476106 gagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaaccctatctaacttttaagaaacttcaaaaacccccatgaaattgttaaacgtta 36476007  T
Q  183 gtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| ||||||    
T  36476006 gtcaattacccccc-tccatttgttttggctgttaaatgactttttttt 36475959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 27585312 - 27585436
Alignment:
Q  104 cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtt 203  Q
    |||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || ||||    
T  27585312 cctgaaattgtacctttcgtcaaaaatccccca-atttttaagaaacttcaaaaacccc-ctgaaattgtcaaacgttagtcgattacccccatt-cgtt 27585408  T
Q  204 tgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||| ||||| ||||||    
T  27585409 tgttttggctgttaaatgactttttttt 27585436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 36475285 - 36475424
Alignment:
Q  96 aaaaaccccctgaaattgtaactttcgtcaaaaacccccc-tgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccc 194  Q
    ||||| ||| |||||||||||||||||||||||| |  || ||||||||||||||||||||||    |||||||||| | ||||||||||||||||||||    
T  36475285 aaaaatcccttgaaattgtaactttcgtcaaaaaacttccatgatttttaagaaacttcaaaagaaaccctgaaattgttaaacgttagtcaattacccc 36475384  T
Q  195 ccttccgtttgttttggctgttaagtgactattttttaattt 236  Q
    |  ||||||||||||||||||||| |||| |||||| |||||    
T  36475385 c--tccgtttgttttggctgttaaatgacaatttttaaattt 36475424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 4564266 - 4564152
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||| |||  ||||| ||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  4564266 tgagtaaatagtcaattaccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 4564167  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  4564166 gtcaattacccccct 4564152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 11343451 - 11343355
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  11343451 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 11343355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 11501471 - 11501375
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  11501471 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 11501375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 190
Target Start/End: Original strand, 786732 - 786843
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaac-ccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 178  Q
    ||||||||||| |||||||||| ||| ||||| |||| |||| | |||||  |||||||||||||||||||||||||||| |||| | ||||||||||||    
T  786732 aatgagtaaattggcaaaaacctccttgaaatcgtaagtttcataaaaaaatccccctgatttttaagaaacttcaaaaaaccccataaaattatcaaac 786831  T
Q  179 gttagtcaatta 190  Q
    ||||||||||||    
T  786832 gttagtcaatta 786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 41707122 - 41707005
Alignment:
Q  81 aatgagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||||||  ||||||| ||||   |||| |||||||||||||||||||| |||| ||    
T  41707122 aatgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaaaacccctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcg 41707023  T
Q  180 ttagtcaattacccccct 197  Q
    |  |||||||||||||||    
T  41707022 tctgtcaattacccccct 41707005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 45575952 - 45576061
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    |||||||| || ||||||||||||||||| |||||||||| ||||||| ||||| ||| | ||||| |||||||||||||||||||||||  ||||||||    
T  45575952 tgaaattgaaagtttcgtcaaaaacccccatgatttttaaaaaacttc-aaaactcccataaaattgtcaaacgttagtcaattaccccc--tccgtttg 45576048  T
Q  206 ttttggctgttaa 218  Q
    ||| |||| ||||    
T  45576049 tttgggctattaa 45576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 14282798 - 14282894
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||| ||| |||| |||  |||||||||||||||    
T  14282798 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtctgtcaattacccccct 14282894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 14284290 - 14284194
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  | |||||||||||||||||| |||| |||  |||||||||||||||    
T  14284290 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 14284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 11341969 - 11342083
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||| ||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  11341969 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11342068  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  11342069 gtcaattacccccct 11342083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 11499988 - 11500102
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||| ||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  11499988 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11500087  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  11500088 gtcaattacccccct 11500102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 16420115 - 16420231
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 180  Q
    ||||||||||||| |||  |||||||||||||||||||||||| ||||| |||||||| ||||   |||  |||||||||||||||||||| | || |||    
T  16420115 aatgagtaaatagtcaattaccccctgaaattgtaactttcgttaaaaatccccctgaattttgcaaaatatcaaaaacccccctgaaattgtaaagcgt 16420214  T
Q  181 tagtcaattacccccct 197  Q
       ||||||||||||||    
T  16420215 ctatcaattacccccct 16420231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 27586122 - 27585974
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||| ||||||||||||   ||| ||||||||||||||||| |||||  ||||  | |||||||||||||||||||  | ||||||||| | |||||    
T  27586122 aatgagtgaataggcaaaaaaaaccttgaaattgtaactttcgttaaaaaatccccatacttttaagaaacttcaaaaa-actcctgaaattgttaaacg 27586024  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactatttttt 231  Q
    ||||||||||||||||  ||| |||||| |||||||||| ||| | ||||||    
T  27586023 ttagtcaattaccccc--tccatttgttatggctgttaaatgattttttttt 27585974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 38482580 - 38482469
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttag 183  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||   |||  | ||||||||||  |||||| |||| |||  |    
T  38482580 gagtaaatagtcaattaccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaaccccctggaaattgtcaagcgtctg 38482481  T
Q  184 tcaattaccccc 195  Q
    ||||||||||||    
T  38482480 tcaattaccccc 38482469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 51304736 - 51304851
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccct-gatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||| |||||| || ||||   |||  |||||||||||||||||||| |||| |||     
T  51304736 tgagtaaatagtcaattaccccctgaaattgtaactttcatcaaaaatcccccttgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 51304835  T
Q  182 agtcaattacccccct 197  Q
     |||||||||||||||    
T  51304836 tgtcaattacccccct 51304851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 42813229 - 42813343
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    ||||||||||| |||  | |||||||||||||||||||| |||||||||||||||| ||||   |||  |||||||| |||||||||||  ||| |||      
T  42813229 tgagtaaatagtcaattatcccctgaaattgtaactttcatcaaaaacccccctgaattttgccaaatgtcaaaaactcccctgaaattgccaagcgtcg 42813328  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  42813329 gtcaattacccccct 42813343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 41729951 - 41729856
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    ||||||||||||||| ||||||||||||||||||| | ||||   |||  |||||||||||||||||||| |||| |||  |||||||| ||||||    
T  41729951 cccctgaaattgtaattttcgtcaaaaacccccctaaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattatccccct 41729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 42813910 - 42813796
Alignment:
Q  84 gagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||||||||||| ||||   |||  |||||||   |||||||||| |||| |||      
T  42813910 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaaaccctgaaattgtcaagcgtct 42813811  T
Q  183 gtcaattacccccct 197  Q
    |||||||||||||||    
T  42813810 gtcaattacccccct 42813796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 51306410 - 51306292
Alignment:
Q  81 aatgagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacc-cccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 178  Q
    ||||||||||||| |||  |||||| ||||||||||||||| ||||||||   ||||||| || |  ||||  |||||||||||||||||||| |||| |    
T  51306410 aatgagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaaaaacccctgaattatgcgaaatgtcaaaaacccccctgaaattgtcaagc 51306311  T
Q  179 gttagtcaattacccccct 197  Q
    ||  |||||||||||||||    
T  51306310 gtctgtcaattacccccct 51306292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 24646514 - 24646463
Alignment:
Q  141 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacc 192  Q
    ||||||||||||||||||||| | ||||||| |||||||||| |||||||||    
T  24646514 tttaagaaacttcaaaaaccctcatgaaattgtcaaacgttaatcaattacc 24646463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 46318760 - 46318869
Alignment:
Q  84 gagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  |||||| | ||||||||||||||||||||| ||||||||| ||||   |||  | |||||||||||||||||  |||| |||      
T  46318760 gagtaaatagtcaattacccccataaaattgtaactttcgtcaaaaccccccctgaattttgcaaaatgtaaaaaacccccctgaaatggtcaagcgtct 46318859  T
Q  183 gtcaattacc 192  Q
    ||||||||||    
T  46318860 gtcaattacc 46318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 6918889 - 6918845
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||    
T  6918889 atgagtaaataggcaattaccccctgaaattgtaagtttcgtcaa 6918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 26991094 - 26991038
Alignment:
Q  141 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||  |||| ||||| |||||||||| |||||||| |||||    
T  26991094 tttaagaaacttcaaaaacttccctaaaattgtcaaacgttaatcaattactcccct 26991038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 27235267 - 27235212
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||||  |||||||||||||||||  ||||||||  ||||||||||    
T  27235267 tgagtaaataggcaattaccccctgaaattgtaaggttcgtcaattacccccctga 27235212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 5158677 - 5158785
Alignment:
Q  108 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgtt 207  Q
    |||||||| ||||||| ||||| ||| | || ||||||||||||||| ||| |||  ||||||| ||||||||| |||||||  ||| | |||| |||||    
T  5158677 aaattgtagctttcgtaaaaaatcccgc-gacttttaagaaacttcacaaatccctttgaaattgtcaaacgttggtcaattttccctc-tccgattgtt 5158774  T
Q  208 ttggctgttaa 218  Q
    |||| ||||||    
T  5158775 ttggttgttaa 5158785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 18542376 - 18542330
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  18542376 taatgagtaaataggcaattaccccctaaaattgtaagtttcgtcaa 18542330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 26441924 - 26441982
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||| ||| | |||||||||||||||| |||| ||||  ||||||||||    
T  26441924 taatgagtaaatagtcaatatccccctgaaattgtaagtttcatcaattacccccctga 26441982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 43759553 - 43759607
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    ||||||||||||||  ||||||| ||||||||| |||||||||  ||||||||||    
T  43759553 gagtaaataggcaattaccccctcaaattgtaagtttcgtcaattacccccctga 43759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 20898532 - 20898620
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  20898532 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 20898620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 20899374 - 20899286
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  20899374 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 20899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 37612849 - 37612937
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 189  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  37612849 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 37612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 44396463 - 44396520
Alignment:
Q  81 aatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||||||  ||||| ||||||||||| |||| ||||  ||||||||||    
T  44396463 aatgagtaaataggcaattaccccatgaaattgtaagtttcatcaattacccccctga 44396520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 46319187 - 46319143
Alignment:
Q  155 aaaacccccctgaaattatcaaacgttagtcaattaccccccttc 199  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||    
T  46319187 aaaacccccctgaaattgtcaagcgtctgtcaattaccccccttc 46319143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 36067293 - 36067450
Alignment:
Q  81 aatgagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||||| ||| ||||     
T  36067293 aatgagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaatcccccctgatttttaagaaattttaaaaaaccccctgaaa-tattaaaca 36067391  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaagtgactattttttaatttcttt 240  Q
    ||||||||||||||||  ||||||| ||||||| ||||| |||||||||||||||||||||    
T  36067392 ttagtcaattaccccc--tccgtttattttggccgttaaatgactattttttaatttcttt 36067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 3987371 - 3987239
Alignment:
Q  84 gagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||   || ||||||| ||||||||||    
T  3987371 gagtgaataggcaaaaagccccctgaaattgtaactttcgtcaaaaatcctcctgatttttaagaaacttaaaaaaaaaccttgaaattgtcaaacgtta 3987272  T
Q  183 gtcaattaccccccttccgtttgttttggctgtta 217  Q
    |||||||||||||  ||||||||||||||||||||    
T  3987271 gtcaattaccccc--tccgtttgttttggctgtta 3987239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 36068220 - 36068096
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 204  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||| |||||||| |||||||||||| ||||| |||||||||||||||||| |||||||    
T  36068220 ctgaaattgtagctttcgtcaaaaaaccccctgatttttaggaaatttcaaaaaaccccctgaaattgtcaaatgttagtcaattacccccc-tccgttt 36068122  T
Q  205 gttttggctgttaagtgactatttttt 231  Q
    ||||||||| |||| ||||||||||||    
T  36068121 gttttggct-ttaaatgactatttttt 36068096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 32391025 - 32390892
Alignment:
Q  83 tgagtaaataggcaaaaacc-ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||||||||||   ||| ||||||||| | |||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||||||||    
T  32391025 tgagtaaataggcaaaaaaaaccccgaaattgtagcattcgtcaaaa-cccccctgacatttaagaaacttcaaaaatcccc-tgaaattatcaaacgtt 32390928  T
Q  182 agtcaattaccccccttccgtttgttttggctgttaa 218  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  32390927 agtcaattacccccc-tccgtttgttttgactgttaa 32390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 30480808 - 30480683
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    |||||||||||||||||| |||||  ||| |||||||||||| ||||||||||  ||| ||||||| |||||||||||||||||| |||||| |||||||    
T  30480808 tgaaattgtaactttcgtaaaaaattcccttgatttttaagatacttcaaaaaatcccttgaaattgtcaaacgttagtcaattatccccct-ccgtttg 30480710  T
Q  206 -ttttggctgttaagtgactatttttt 231  Q
     ||||||||||||| ||||||||||||    
T  30480709 gttttggctgttaaatgactatttttt 30480683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 31285488 - 31285584
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  31285488 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 31285584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 6733017 - 6733141
Alignment:
Q  84 gagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||| |||||||||||||| || | ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||| ||| ||||||| | ||||||||    
T  6733017 gagtgaataggcaaaaacctccataaaattataactttcgtcaaaaaccccc-tgacttttaaaaaacttcaaaaactcccatgaaattgttaaacgtta 6733115  T
Q  183 gtcaattaccccccttccgtttgtttt 209  Q
    |||||||| || || ||||||||||||    
T  6733116 gtcaattatcctcc-tccgtttgtttt 6733141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 31286962 - 31286866
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||| ||| |||| |||  |||||||||||||||    
T  31286962 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtctgtcaattacccccct 31286866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 6733275 - 6733140
Alignment:
Q  81 aatgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||||   |||||||||||||||||||| |||||   |  ||||||| |||||||    
T  6733275 aatgagtgaataggcaaaaatctctctgaaattgtaactttcgtcaaaaaaaaccctgatttttaagaaactt-aaaaaaaactttgaaattgtcaaacg 6733177  T
Q  180 ttagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    |||| |||||||||||  | ||||| |||||||||||||    
T  6733176 ttagccaattaccccc--ttcgtttattttggctgttaa 6733140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 24240589 - 24240699
Alignment:
Q  106 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 205  Q
    ||||||||||||||| ||||||||||||| ||||||||   || |||||||||  ||||||||||| | ||| |||||||||||||||||| || || ||    
T  24240589 tgaaattgtaacttttgtcaaaaacccccttgatttttgcaaagcttcaaaaaaacccctgaaattgttaaatgttagtcaattacccccc-tctgtctg 24240687  T
Q  206 ttttggctgtta 217  Q
    ||||||||||||    
T  24240688 ttttggctgtta 24240699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 35394827 - 35394712
Alignment:
Q  83 tgagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 181  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||| ||||||| |||| | |     
T  35394827 tgagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccatgaaattgtcaagcatc 35394728  T
Q  182 agtcaattacccccct 197  Q
     |||||||||||||||    
T  35394727 tgtcaattacccccct 35394712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 3986569 - 3986674
Alignment:
Q  123 tcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtga 222  Q
    |||||||||||| | |||||||||||| |||||||| ||| || ||||| | ||| |||| |||||||||||   |||||||||||||| |||||| |||    
T  3986569 tcaaaaacccccttaatttttaagaaatttcaaaaaaccctctaaaattgtaaaatgttaatcaattacccc---tccgtttgttttggttgttaaatga 3986665  T
Q  223 ctatttttt 231  Q
    || ||||||    
T  3986666 ctttttttt 3986674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 29721197 - 29721083
Alignment:
Q  81 aatgagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 179  Q
    ||||||||||||| |||  ||||||| ||||||||||||||| |||||||| ||||||| ||||   |||| |||||||  ||||||||||| |||| ||    
T  29721197 aatgagtaaatagtcaattacccccttgaaattgtaactttcttcaaaaac-cccctgaattttgcaaaacgtcaaaaa--cccctgaaattgtcaagcg 29721101  T
Q  180 ttagtcaattacccccct 197  Q
    || |||||||||||||||    
T  29721100 tttgtcaattacccccct 29721083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 34894195 - 34894307
Alignment:
Q  84 gagtaaataggcaaaaaccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  ||||||| ||||||||| |||||||||||||  | ||||| ||||   ||||||||||||  ||||||||||| |||||||| |    
T  34894195 gagtaaatagtcaattacccccttgaaattgtagctttcgtcaaaaattctcctgaattttgcaaaacttcaaaaaaacccctgaaattgtcaaacgtca 34894294  T
Q  183 gtcaattaccccc 195  Q
    ||||| |||||||    
T  34894295 gtcaaataccccc 34894307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 22021769 - 22021856
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||  ||||||||||||||||| |||||||||  ||||||||||| || |  |||||||||  |||||| |||||||    
T  22021769 gagtaaataggcaattaccccctgaaattgtaagtttcgtcaattacccccctgatattaataaaacttcaattacccccttgaaatt 22021856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 26157290 - 26157360
Alignment:
Q  101 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||| ||| ||||||||||||| ||| ||||   |||| ||||||||||||||||||||    
T  26157290 ccccctgaaattgtaatttttgtcaaaaacccccttgaattttgcaaaacgtcaaaaacccccctgaaatt 26157360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 35393163 - 35393277
Alignment:
Q  84 gagtaaataggcaaaaaccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 182  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||  ||||||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  35393163 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaattcccctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgtct 35393262  T
Q  183 gtcaattacccccct 197  Q
    |||||||| ||||||    
T  35393263 gtcaattatccccct 35393277  T

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Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 41589198 - 41589315
Alignment:
Q  97 aaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccc 196  Q
    ||||||||||||||||||||||| || |||||||  || | | ||| |||||| ||||||||   ||  ||| ||||||||||||||||||||||||||     
T  41589198 aaaaccccctgaaattgtaacttccgccaaaaacttcc-taactttaaagaaatttcaaaaaaaacctagaa-ttatcaaacgttagtcaattaccccc- 41589294  T
Q  197 ttccgtttgttttggctgttaa 218  Q
     || ||||||||||||||||||    
T  41589295 -tctgtttgttttggctgttaa 41589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 23351729 - 23351675
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaaccccc 134  Q
    |||||||||||||| |||  ||||| |||||||||||||||||| ||||||||||    
T  23351729 taatgagtaaatagtcaattaccccttgaaattgtaactttcgttaaaaaccccc 23351675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 45258917 - 45258961
Alignment:
Q  82 atgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||    
T  45258917 atgagtaaataggcaattaccccctgaaattgtaagtttcgtcaa 45258961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 39628393 - 39628480
Alignment:
Q  102 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    ||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||   |||||||||||||||    
T  39628393 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcaaaacgttagtcaatt 39628480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 17271802 - 17271888
Alignment:
Q  103 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 189  Q
    |||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||  | ||||||||||||||    
T  17271802 ccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcccaacgttagtcaatt 17271888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 22023094 - 22023048
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||||||  ||||||||||||||||| |||| ||||    
T  22023094 taatgagtaaataggcaattaccccctgaaattgtaagtttcttcaa 22023048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 29417148 - 29417206
Alignment:
Q  81 aatgagtaaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctga 138  Q
    |||||||||||||||||  ||||| |||||||||||| |||||||||  ||||||||||    
T  29417148 aatgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctga 29417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 33228679 - 33228637
Alignment:
Q  84 gagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||  ||||||||||||||||| |||||||||    
T  33228679 gagtaaataggcaattaccccctgaaattgtaagtttcgtcaa 33228637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 29418237 - 29418148
Alignment:
Q  83 tgagtaaataggcaaaaa-ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    |||||||||||||||  | |||||||||||||||| |||||||||  || |||||||  || |  |||||||||  ||||||||||||||    
T  29418237 tgagtaaataggcaattatccccctgaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaatt 29418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 32389978 - 32390038
Alignment:
Q  132 cccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 195  Q
    |||| ||| |||||||||||| ||||   ||||||||||| |||||||||||||||||| ||||    
T  32389978 cccccgatatttaagaaactttaaaa---cccctgaaattgtcaaacgttagtcaattatcccc 32390038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 25143343 - 25143391
Alignment:
Q  83 tgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaaaaacc 131  Q
    ||||||||| | |||  ||||| ||||||||||||||||||||||||||    
T  25143343 tgagtaaattgtcaattaccccatgaaattgtaactttcgtcaaaaacc 25143391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 1997 - 2080
Alignment:
Q  132 cccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgtta 217  Q
    ||||||||||||   |||||||||||||||| |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  1997 cccctgatttttgcaaaacttcaaaaacccc-ctgaaattgttaaacgttagtcaattacccccc-tccgtctgttttggctgtta 2080  T

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Target: scaffold0169 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 26706 - 26817
Alignment:
Q  105 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 204  Q
    |||||||||||||||||||||||||  ||    | ||||||||||||||||||| |  ||||||||| ||||||||||| ||| ||  || | |||||||    
T  26706 ctgaaattgtaactttcgtcaaaaagtccgacaacttttaagaaacttcaaaaatcttcctgaaattgtcaaacgttagacaacta--ccacatccgttt 26803  T
Q  205 gttttggctgttaa 218  Q
     |||||||||||||    
T  26804 attttggctgttaa 26817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 27477 - 27404
Alignment:
Q  141 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 218  Q
    |||||||||||| ||||||| | |  ||||| ||||||| |||||||||||||||  |||||||||||||||||||||    
T  27477 tttaagaaacttaaaaaacctctc--aaattgtcaaacgatagtcaattaccccc--tccgtttgttttggctgttaa 27404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 124
Target Start/End: Complemental strand, 7697 - 7662
Alignment:
Q  89 aataggcaaaaaccccctgaaattgtaactttcgtc 124  Q
    ||||||||||||||||||||||||||||||||||||    
T  7697 aataggcaaaaaccccctgaaattgtaactttcgtc 7662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 43501 - 43413
Alignment:
Q  84 gagtaaataggcaaaaaccccc-tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 171  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 43413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 59759 - 59713
Alignment:
Q  80 taatgagtaaataggcaaaaaccccctgaaattgtaactttcgtcaa 126  Q
    ||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  59759 taatgagtaaataggtaattaccccctgaaattgtaagtttcgtcaa 59713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 37974 - 37930
Alignment:
Q  90 ataggcaaaaaccccctgaaattgtaactttcgtcaaaaaccccc 134  Q
    ||||||||  ||||| |||||||||||| ||||||||||||||||    
T  37974 ataggcaattaccccatgaaattgtaacattcgtcaaaaaccccc 37930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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