View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6086_high_13 (Length: 274)
Name: NF6086_high_13
Description: NF6086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6086_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 6623488 - 6623735
Alignment:
| Q |
9 |
agcacagacaagaaaacacacagaaccagcagtgaggtggttaaagcaatgaggagtacttttgtgtttgacttgcactttttgaagctgcaaccaagag |
108 |
Q |
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| T |
6623488 |
agcacaaacaagaaaacacacagaaccagcagtgaggtggttaaagcaatgaggagtacttttgtgtttgacttgcactttttgaagctgcaaccaagag |
6623587 |
T |
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| Q |
109 |
ggtttggtggatcattagcaactatagttgttaaactcactggttcgcttgccaaaggaatcagaacagtagtgaatggaaaaaggagttcagtttgtgt |
208 |
Q |
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| T |
6623588 |
gggttggtggatcattagcaactatagttgttaaactcactggttcgcttgccaaaggaatcagaacagtagtgaatggaaaaaggagttcagtttgtgt |
6623687 |
T |
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| Q |
209 |
ggaaaaaccattggcatcaattagattacccactggtacattgaatct |
256 |
Q |
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| T |
6623688 |
ggaaaaaccattggcatcaattagattacccactggtatattgaatct |
6623735 |
T |
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