View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6086_high_14 (Length: 268)
Name: NF6086_high_14
Description: NF6086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6086_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 39888150 - 39887914
Alignment:
| Q |
14 |
catcaccctgtgagaaatgcatgtcacctgtgctgagatttgctccttctacaaaaacaggaagatatacctttgaacctctgcttagattttttatgtc |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39888150 |
catcaccctgtgagaaatgcatgtcacctgtgctgagatttgctccttctacaaaaacaggaagatatacctttgaacctctgcttagattttttatgtc |
39888051 |
T |
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| Q |
114 |
acaatttccaccgttttctcttcccggtattgttcttgctgcttcccttgcaatcttctcccattcatcagtacctttttcaatctacaagagtttcaag |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
39888050 |
acaatttccaccgttttctcttcccggtattgttcttgctgcttcccttgcaatcttctcccattcatcagtatctttttcaatctacaagagtttcaag |
39887951 |
T |
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| Q |
214 |
aaatgaaatcttgtttgatttcttaacaagccaacaa |
250 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
39887950 |
aaatgaaatcttgtttgatttcttaacaagccaacaa |
39887914 |
T |
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