View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6089_high_13 (Length: 240)
Name: NF6089_high_13
Description: NF6089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6089_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 43820687 - 43820905
Alignment:
| Q |
6 |
agcagcacagaactcatcactcccttgaacagaatacctcacacgtatcccataagcccaatcactaggtccatcaaccttcaaaggtgccacactataa |
105 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43820687 |
agcaccacaaaactcatcactcccttgaacagaatacctcacacgtatcccataagcccaatcactaggtccatcaaccttcaaaggtgccacactataa |
43820786 |
T |
|
| Q |
106 |
gcactactatacccttcacactcaagcttacttagattaatccccttaatagcttcataagacacagcacaacactcaggtgggccagacccaaaaaacg |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
43820787 |
gcactactatacccttcacactcaagcttacttagattaatccccttaatagcttcataagacacagcacaacactcaggtggaccagacccaaaaaacg |
43820886 |
T |
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| Q |
206 |
aagaagaacctgtcctttt |
224 |
Q |
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||||||||||||||||||| |
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| T |
43820887 |
aagaagaacctgtcctttt |
43820905 |
T |
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