View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6090_low_6 (Length: 202)

Name: NF6090_low_6
Description: NF6090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6090_low_6
NF6090_low_6
[»] chr6 (45 HSPs)
chr6 (21-187)||(2732893-2733059)
chr6 (65-145)||(14399814-14399893)
chr6 (35-146)||(1912458-1912569)
chr6 (65-183)||(33532473-33532590)
chr6 (87-183)||(2457180-2457273)
chr6 (77-165)||(28640488-28640576)
chr6 (65-155)||(11602521-11602611)
chr6 (44-160)||(7939859-7939975)
chr6 (84-155)||(9163745-9163816)
chr6 (84-150)||(26373077-26373143)
chr6 (52-129)||(9074105-9074182)
chr6 (84-144)||(9194433-9194493)
chr6 (48-107)||(33282734-33282793)
chr6 (82-140)||(653351-653409)
chr6 (65-143)||(770343-770421)
chr6 (82-120)||(2231090-2231128)
chr6 (56-130)||(14933137-14933211)
chr6 (81-159)||(21869848-21869926)
chr6 (65-155)||(29243074-29243164)
chr6 (83-117)||(33735435-33735469)
chr6 (75-160)||(1906845-1906930)
chr6 (65-142)||(2766868-2766945)
chr6 (97-150)||(4886204-4886257)
chr6 (83-156)||(8432017-8432090)
chr6 (84-144)||(264555-264615)
chr6 (70-142)||(6012248-6012320)
chr6 (81-137)||(14933023-14933079)
chr6 (77-161)||(33996332-33996416)
chr6 (65-112)||(739704-739751)
chr6 (79-142)||(5730189-5730252)
chr6 (65-112)||(19390976-19391023)
chr6 (23-94)||(30532117-30532188)
chr6 (48-107)||(33260438-33260497)
chr6 (77-128)||(33851279-33851330)
chr6 (98-144)||(3736992-3737038)
chr6 (86-144)||(26494408-26494466)
chr6 (88-158)||(31322632-31322702)
chr6 (84-158)||(31694723-31694797)
chr6 (48-110)||(33386192-33386254)
chr6 (122-187)||(2496383-2496447)
chr6 (78-111)||(4354338-4354371)
chr6 (45-110)||(9075206-9075271)
chr6 (93-146)||(29404955-29405008)
chr6 (75-112)||(32392369-32392406)
chr6 (84-144)||(24769309-24769369)
[»] chr1 (38 HSPs)
chr1 (75-158)||(15606321-15606404)
chr1 (60-144)||(7347693-7347777)
chr1 (65-144)||(6025952-6026031)
chr1 (76-146)||(17473136-17473206)
chr1 (83-160)||(52517064-52517141)
chr1 (83-150)||(30882449-30882515)
chr1 (84-158)||(44417783-44417857)
chr1 (75-144)||(47847982-47848050)
chr1 (29-144)||(43391480-43391595)
chr1 (75-141)||(3240482-3240548)
chr1 (21-183)||(15794004-15794165)
chr1 (76-144)||(15955893-15955961)
chr1 (86-142)||(32868272-32868328)
chr1 (84-139)||(33651660-33651715)
chr1 (75-137)||(15592675-15592737)
chr1 (65-115)||(26161587-26161637)
chr1 (75-144)||(3950673-3950742)
chr1 (65-146)||(7991516-7991597)
chr1 (75-144)||(15923758-15923827)
chr1 (56-161)||(26360296-26360401)
chr1 (83-144)||(32721421-32721482)
chr1 (93-144)||(11766188-11766237)
chr1 (60-144)||(12764017-12764101)
chr1 (76-160)||(28067473-28067557)
chr1 (67-138)||(400901-400972)
chr1 (75-150)||(11049047-11049122)
chr1 (83-130)||(46331109-46331156)
chr1 (78-144)||(3335145-3335211)
chr1 (84-141)||(4541583-4541638)
chr1 (83-157)||(15190855-15190929)
chr1 (65-141)||(15364936-15365009)
chr1 (81-131)||(19392212-19392262)
chr1 (77-155)||(50322030-50322108)
chr1 (83-144)||(14643201-14643262)
chr1 (87-144)||(15956878-15956935)
chr1 (83-139)||(1880082-1880137)
chr1 (84-144)||(46937570-46937630)
chr1 (87-159)||(48432631-48432703)
[»] chr7 (38 HSPs)
chr7 (76-160)||(7245942-7246026)
chr7 (77-158)||(6894305-6894386)
chr7 (76-146)||(1110401-1110471)
chr7 (75-144)||(38774312-38774381)
chr7 (65-140)||(24942499-24942574)
chr7 (83-157)||(2219525-2219599)
chr7 (22-144)||(30900051-30900173)
chr7 (90-144)||(39417762-39417816)
chr7 (75-144)||(23747323-23747392)
chr7 (44-144)||(38921262-38921362)
chr7 (88-146)||(1109354-1109412)
chr7 (82-144)||(13380906-13380968)
chr7 (76-130)||(21451517-21451571)
chr7 (34-144)||(23218571-23218681)
chr7 (105-158)||(400623-400676)
chr7 (75-112)||(5260422-5260459)
chr7 (87-144)||(21450959-21451016)
chr7 (81-129)||(8095907-8095955)
chr7 (84-144)||(23117360-23117420)
chr7 (65-129)||(44124546-44124610)
chr7 (65-144)||(1662624-1662703)
chr7 (65-112)||(10455094-10455141)
chr7 (23-110)||(24673364-24673451)
chr7 (80-143)||(33007893-33007955)
chr7 (83-142)||(37233722-37233781)
chr7 (75-158)||(38622871-38622954)
chr7 (88-158)||(7982345-7982415)
chr7 (100-158)||(21343694-21343752)
chr7 (87-157)||(25268805-25268875)
chr7 (84-126)||(30885321-30885363)
chr7 (64-146)||(33581726-33581808)
chr7 (76-110)||(40869547-40869581)
chr7 (86-151)||(30408257-30408321)
chr7 (65-158)||(31838837-31838929)
chr7 (83-144)||(32231762-32231823)
chr7 (64-117)||(32888963-32889016)
chr7 (75-108)||(34925312-34925345)
chr7 (85-157)||(25314032-25314104)
[»] chr5 (40 HSPs)
chr5 (83-158)||(11257714-11257789)
chr5 (75-152)||(21047059-21047136)
chr5 (95-144)||(39647139-39647188)
chr5 (44-144)||(7430118-7430218)
chr5 (80-144)||(27731590-27731654)
chr5 (75-158)||(39159727-39159810)
chr5 (75-156)||(16973824-16973905)
chr5 (80-144)||(41894417-41894481)
chr5 (76-178)||(40677960-40678061)
chr5 (83-145)||(41015003-41015065)
chr5 (75-144)||(6202589-6202658)
chr5 (35-183)||(6586482-6586627)
chr5 (83-144)||(33342728-33342789)
chr5 (77-158)||(41991173-41991254)
chr5 (87-160)||(43283418-43283491)
chr5 (83-159)||(31029562-31029638)
chr5 (21-157)||(34156643-34156779)
chr5 (84-152)||(40990949-40991017)
chr5 (121-183)||(8977426-8977485)
chr5 (75-130)||(9446286-9446341)
chr5 (87-158)||(16033019-16033090)
chr5 (75-158)||(29466168-29466250)
chr5 (85-119)||(17855226-17855260)
chr5 (74-144)||(18551479-18551549)
chr5 (122-160)||(18839185-18839223)
chr5 (84-146)||(19115099-19115160)
chr5 (86-144)||(20981270-20981328)
chr5 (76-146)||(40213882-40213951)
chr5 (75-145)||(41376333-41376402)
chr5 (115-144)||(1792110-1792139)
chr5 (85-150)||(7477556-7477621)
chr5 (75-144)||(14956693-14956762)
chr5 (83-144)||(38346862-38346923)
chr5 (98-151)||(39647243-39647296)
chr5 (75-119)||(631483-631527)
chr5 (35-111)||(4787945-4788021)
chr5 (87-119)||(13996378-13996410)
chr5 (78-130)||(34451993-34452045)
chr5 (81-141)||(37056370-37056430)
chr5 (83-111)||(41399570-41399598)
[»] chr2 (37 HSPs)
chr2 (37-122)||(27317996-27318081)
chr2 (88-155)||(33958230-33958297)
chr2 (75-145)||(26174925-26174994)
chr2 (65-146)||(11530027-11530108)
chr2 (84-143)||(41631885-41631944)
chr2 (65-140)||(42616723-42616798)
chr2 (55-149)||(17442941-17443035)
chr2 (80-160)||(44458225-44458305)
chr2 (81-144)||(4204949-4205011)
chr2 (73-128)||(18569435-18569490)
chr2 (44-151)||(31790447-31790554)
chr2 (82-153)||(39597568-39597639)
chr2 (88-158)||(20547095-20547165)
chr2 (56-144)||(2045047-2045133)
chr2 (87-145)||(11328128-11328188)
chr2 (84-129)||(28044715-28044760)
chr2 (75-144)||(28804336-28804405)
chr2 (66-107)||(32321501-32321542)
chr2 (83-132)||(33971657-33971706)
chr2 (59-111)||(3110516-3110568)
chr2 (74-158)||(20265521-20265605)
chr2 (76-144)||(29378509-29378577)
chr2 (75-139)||(29728763-29728827)
chr2 (80-111)||(12749997-12750028)
chr2 (84-146)||(16733711-16733773)
chr2 (84-138)||(29415748-29415802)
chr2 (76-118)||(31235209-31235251)
chr2 (83-144)||(18104051-18104112)
chr2 (75-144)||(25694401-25694470)
chr2 (82-111)||(44460364-44460393)
chr2 (76-116)||(31246953-31246993)
chr2 (65-145)||(32562372-32562450)
chr2 (84-144)||(33623675-33623735)
chr2 (68-116)||(35538056-35538104)
chr2 (84-112)||(36300414-36300442)
chr2 (75-151)||(38475860-38475936)
chr2 (80-144)||(42172801-42172865)
[»] chr3 (34 HSPs)
chr3 (75-143)||(25252041-25252109)
chr3 (84-156)||(32251006-32251078)
chr3 (65-140)||(50402635-50402710)
chr3 (75-144)||(43381176-43381245)
chr3 (80-144)||(15802573-15802637)
chr3 (75-158)||(38692427-38692510)
chr3 (44-119)||(50251516-50251591)
chr3 (83-130)||(53855744-53855791)
chr3 (83-161)||(21754221-21754299)
chr3 (85-142)||(25490545-25490602)
chr3 (90-158)||(14199985-14200053)
chr3 (84-160)||(48236287-48236363)
chr3 (84-158)||(10275819-10275894)
chr3 (84-146)||(2990983-2991045)
chr3 (84-150)||(6994327-6994393)
chr3 (83-144)||(11338510-11338573)
chr3 (99-143)||(16169188-16169232)
chr3 (55-142)||(29279205-29279293)
chr3 (64-144)||(31386057-31386136)
chr3 (90-142)||(51295684-51295736)
chr3 (83-131)||(54842196-54842244)
chr3 (86-129)||(27016927-27016970)
chr3 (84-142)||(20690081-20690139)
chr3 (65-123)||(42064160-42064218)
chr3 (98-159)||(48198079-48198141)
chr3 (64-149)||(1813265-1813349)
chr3 (85-146)||(24830135-24830196)
chr3 (76-161)||(32954243-32954328)
chr3 (78-111)||(39544175-39544208)
chr3 (56-129)||(43307600-43307673)
chr3 (75-108)||(50376231-50376264)
chr3 (84-144)||(162903-162963)
chr3 (84-144)||(29208265-29208325)
chr3 (83-111)||(34363256-34363284)
[»] chr8 (39 HSPs)
chr8 (83-140)||(33120560-33120617)
chr8 (84-144)||(2302706-2302766)
chr8 (46-158)||(27483037-27483149)
chr8 (54-144)||(30560088-30560179)
chr8 (80-158)||(26273036-26273114)
chr8 (83-144)||(8282849-8282910)
chr8 (65-158)||(21226911-21227004)
chr8 (75-160)||(37632120-37632205)
chr8 (83-144)||(45371098-45371159)
chr8 (76-159)||(4050427-4050511)
chr8 (77-160)||(27400521-27400604)
chr8 (65-123)||(13869826-13869884)
chr8 (83-141)||(30692459-30692517)
chr8 (65-146)||(29749219-29749300)
chr8 (44-112)||(3556650-3556718)
chr8 (79-183)||(24857327-24857430)
chr8 (65-149)||(40710077-40710160)
chr8 (66-156)||(13850991-13851079)
chr8 (103-146)||(18737690-18737733)
chr8 (85-156)||(24855531-24855602)
chr8 (65-140)||(26445499-26445574)
chr8 (84-143)||(32616769-32616828)
chr8 (76-111)||(44617697-44617732)
chr8 (84-150)||(9112412-9112478)
chr8 (75-145)||(12196923-12196992)
chr8 (75-145)||(12441351-12441420)
chr8 (65-158)||(2701657-2701749)
chr8 (83-144)||(4114736-4114796)
chr8 (86-155)||(14928232-14928301)
chr8 (81-110)||(16950289-16950318)
chr8 (84-145)||(42843363-42843424)
chr8 (83-144)||(44806258-44806319)
chr8 (65-160)||(1318620-1318716)
chr8 (96-144)||(3238297-3238345)
chr8 (91-155)||(8284356-8284420)
chr8 (85-160)||(12856408-12856481)
chr8 (75-159)||(14730294-14730378)
chr8 (65-137)||(39550949-39551021)
chr8 (76-160)||(43935142-43935226)
[»] chr4 (45 HSPs)
chr4 (75-144)||(415145-415214)
chr4 (86-147)||(55314493-55314554)
chr4 (84-144)||(13298529-13298589)
chr4 (75-150)||(50794568-50794643)
chr4 (65-131)||(34581592-34581658)
chr4 (85-138)||(2843583-2843636)
chr4 (65-144)||(3301608-3301687)
chr4 (79-158)||(17223403-17223482)
chr4 (87-158)||(20709960-20710031)
chr4 (75-158)||(25402826-25402909)
chr4 (72-135)||(31675030-31675093)
chr4 (78-144)||(27722407-27722473)
chr4 (77-139)||(34417827-34417889)
chr4 (66-111)||(3144541-3144586)
chr4 (84-144)||(37538421-37538484)
chr4 (83-144)||(37579590-37579651)
chr4 (84-149)||(48244443-48244508)
chr4 (64-109)||(56049770-56049815)
chr4 (83-123)||(1202394-1202434)
chr4 (76-160)||(1276902-1276986)
chr4 (76-144)||(2562482-2562550)
chr4 (75-111)||(20989525-20989561)
chr4 (34-158)||(39032511-39032635)
chr4 (29-144)||(7295045-7295160)
chr4 (77-160)||(13458783-13458866)
chr4 (76-111)||(18968308-18968343)
chr4 (84-142)||(19062218-19062274)
chr4 (119-158)||(39064896-39064935)
chr4 (75-142)||(47789165-47789232)
chr4 (77-143)||(26275534-26275600)
chr4 (84-150)||(33714228-33714294)
chr4 (77-131)||(34417346-34417400)
chr4 (91-145)||(38596717-38596771)
chr4 (83-112)||(4762551-4762580)
chr4 (91-144)||(9318706-9318759)
chr4 (122-187)||(27098969-27099033)
chr4 (83-144)||(47486045-47486106)
chr4 (77-142)||(53768201-53768266)
chr4 (84-128)||(681986-682030)
chr4 (98-158)||(3625744-3625804)
chr4 (44-120)||(8721885-8721961)
chr4 (84-144)||(30617270-30617329)
chr4 (84-144)||(34416907-34416967)
chr4 (75-119)||(37854003-37854047)
chr4 (75-111)||(41367197-41367233)
[»] scaffold0428 (2 HSPs)
scaffold0428 (48-107)||(11459-11518)
scaffold0428 (48-107)||(4494-4553)
[»] scaffold0940 (1 HSPs)
scaffold0940 (77-159)||(2031-2113)
[»] scaffold0491 (1 HSPs)
scaffold0491 (103-146)||(4389-4432)
[»] scaffold0041 (1 HSPs)
scaffold0041 (76-110)||(96701-96735)
[»] scaffold0898 (1 HSPs)
scaffold0898 (83-144)||(534-594)
[»] scaffold0194 (1 HSPs)
scaffold0194 (76-144)||(13786-13854)


Alignment Details
Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 2733059 - 2732893
Alignment:
Q  21 cgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733059 cgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 2732960  T
Q  121 aaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2732959 aaacaatagcgatttgttcaaatttcactacgctatagtggctataatgccgctatttaacaatatt 2732893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 14399893 - 14399814
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||| ||||||    
T  14399893 tatagagcctctatagctgctatttgacaacactttgtactaaatagc-tatcacaaaacaatagcggtttgtttaaattt 14399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 1912458 - 1912569
Alignment:
Q  35 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatt 134  Q
    |||||||  ||||||||||| |||  ||  ||||||| | ||||||  |||||||||||| | |||||||||||||| |||||||| |||||||||||||    
T  1912458 gtttgttcaaattccgctatgcaacggtgctatagcgtcactatagtcgctatttgacaataatttgtactaaatagtatatcgcagaacaatagcgatt 1912557  T
Q  135 tgttcaaatttc 146  Q
    ||||||||||||    
T  1912558 tgttcaaatttc 1912569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 33532473 - 33532590
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggcta 164  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||||| ||| |   |||||| ||||||||||||||||    ||||||||||| ||||    
T  33532473 tatagcgcaactatagctgctgtttgacaacattctgtactaaatagcgtatagtgtaacaatggcgatttgttcaaattctgttacgctatagt-gcta 33532571  T
Q  165 taacgccgctatttaacaa 183  Q
    || ||||||||| ||||||    
T  33532572 tagcgccgctatctaacaa 33532590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 2457273 - 2457180
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 183  Q
    ||||||||||||||||||||||||||||||| |||||||||||   ||| |||||||| |||||| ||||| | ||||||  |||||||||||||||    
T  2457273 tttgacaacattttgtactaaatagcatatcacaaaacaatagtcgttttttcaaattccactacactatact-gctata--gccgctatttaacaa 2457180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 28640576 - 28640488
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctat 165  Q
    ||||| ||||||||||| |||||||||| ||| ||| ||| ||| ||||||| |||| |||||||||||||||| ||||||| ||||||    
T  28640576 atagccgctatttgacagcattttgtacgaaacagcgtattgcagaacaatatcgatctgttcaaatttcactatgctatagcggctat 28640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 11602521 - 11602611
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    ||||||||  ||| |||| ||||||||||||| ||| |||||||| |  | |  |||||||||||||||||||||||||||||||||||||    
T  11602521 tatagcgcagctaaagcttctatttgacaacactttatactaaattgtttgttacaaaacaatagcgatttgttcaaatttcactacgcta 11602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 7939975 - 7939859
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||||||| | | |||  ||||| ||| ||||||| ||||||||||| || |||||||| |||||  |||| || |||||||| |||||  ||||||    
T  7939975 aattccgctatgctacagtgctatagagccactatagccgctatttgacatcactttgtactgaatagagtatctcagaacaatagtgatttaatcaaat 7939876  T
Q  144 ttcactacgctatagtg 160  Q
    |||| ||||||||||||    
T  7939875 ttcattacgctatagtg 7939859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 9163816 - 9163745
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    ||||||||||||||||||||||||||||| |||  |  |||||||| |||||||||||||||  ||||||||    
T  9163816 ctatttgacaacattttgtactaaatagcgtataacggaacaatagggatttgttcaaatttttctacgcta 9163745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 26373143 - 26373077
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||||||||||| ||||||||||||||| |||| || |||||||| || |||||||| ||||||||    
T  26373143 ctatttgacaacactttgtactaaatagcgtatcacagaacaatagtgagttgttcaattttcacta 26373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 9074105 - 9074182
Alignment:
Q  52 tatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    ||||||| |||  ||||||||| |||||||  |||||||| ||||||||||| |||||||  ||||||||||||||||    
T  9074105 tatacaacagtgctatagcgccgctatagcctctatttgataacattttgtagtaaatagtgtatcgcaaaacaatag 9074182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 9194433 - 9194493
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||| ||||    
T  9194433 ctatttgacaacattttgtactaaataccgtatagcagaacaatagcaatttgttccaatt 9194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 33282793 - 33282734
Alignment:
Q  48 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 107  Q
    |||||| |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||    
T  33282793 ccgctacacaatagttttatagcgccactatagatgctatttcacaacattttgcactaa 33282734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 653409 - 653351
Alignment:
Q  82 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    ||||||||||||||| ||||| |||||||||||||| || | ||||| |||||||||||    
T  653409 tgctatttgacaacagtttgtgctaaatagcatatcacatatcaataccgatttgttca 653351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 770421 - 770343
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||||| ||  ||| |||||||||||||  ||||||||||||||| |||| |  ||||||| ||||||||||||||    
T  770421 tatagcgccactgcagccgctatttgacaaccctttgtactaaatagcgtatcacggaacaataccgatttgttcaaat 770343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 2231090 - 2231128
Alignment:
Q  82 tgctatttgacaacattttgtactaaatagcatatcgca 120  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  2231090 tgctattggacaacattttgtactaaatagcatatcgca 2231128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 14933211 - 14933137
Alignment:
Q  56 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    ||||||| |||||||||| ||||| | ||||| |||||||| ||||||||||| ||  ||||||| |||||||||    
T  14933211 caatagtgttatagcgccactatatccgctatctgacaacaatttgtactaaagagtgtatcgcagaacaatagc 14933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 21869926 - 21869848
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 159  Q
    |||||||||||||||||||||||||||||||  |||| |  |||||||  ||||||||| ||||   ||||||||||||    
T  21869926 ctgctatttgacaacattttgtactaaatagtgtatcacggaacaataatgatttgttcgaattctgctacgctatagt 21869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 29243074 - 29243164
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    ||||||||| ||||||| || ||||||| | ||||| || |||||||  |||| || |||||||| || ||||||||||| ||||||||||    
T  29243074 tatagcgccactatagccgcaatttgactagattttatattaaatagtgtatcccagaacaatagagaattgttcaaattccactacgcta 29243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 33735435 - 33735469
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatc 117  Q
    |||||||||||||||||||||||||||||||||||    
T  33735435 gctatttgacaacattttgtactaaatagcatatc 33735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 1906845 - 1906930
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||| |||||||||||| |||| |||||||||||||   | | ||| |||||||| |||||||||||||| |||| | ||||||||    
T  1906845 ctatcgctgctatttgataacaatttgtactaaatattttgttgcagaacaatagtgatttgttcaaattccactgcactatagtg 1906930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 2766945 - 2766868
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    ||||| || ||||| ||| ||||||||||| ||||| ||||||||| | |||| || |||||||| ||||||||||||    
T  2766945 tatagtgcttctatggctactatttgacaatattttatactaaataacgtatcacataacaatagagatttgttcaaa 2766868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 4886257 - 4886204
Alignment:
Q  97 ttttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||| |||||||||||||||||  |||||||| |||||||||||||| |||||    
T  4886257 ttttgcactaaatagcatatcgcggaacaatagagatttgttcaaattccacta 4886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 8432090 - 8432017
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 156  Q
    ||||||||||| || |||||||||| |||||| | ||  || |||||||||||||||||||||  |||||||||    
T  8432090 gctatttgacagcactttgtactaattagcatcttgctgaataatagcgatttgttcaaattttgctacgctat 8432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 264615 - 264555
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||| ||||||||||||||| || | || ||||||| | |||||||||||||    
T  264615 ctatttgacaacactttgtactaaatagcctaccacagaacaataacaatttgttcaaatt 264555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 6012320 - 6012248
Alignment:
Q  70 cgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||| ||| |||||||||||||||||| |||| |||||||||  |||| || | |||||||||| ||||||||    
T  6012320 cgccgctaaagctgctatttgacaacagtttgaactaaatagagtatcacagagcaatagcgatgtgttcaaa 6012248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 14933023 - 14933079
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 137  Q
    ||||||| |||||||||||||||||||||||  ||| ||| |||||||||| |||||    
T  14933023 ctgctatctgacaacattttgtactaaatagtgtattgcagaacaatagcggtttgt 14933079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 33996332 - 33996416
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 161  Q
    ||||| |||||| |||||||||||||| |||| |||  || ||  |||||||||| |||||||||||| | ||||||| ||||||    
T  33996332 atagcagctattagacaacattttgtagtaaaaagcggattgcggaacaatagcggtttgttcaaattccgctacgctttagtgg 33996416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 739751 - 739704
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 112  Q
    ||||| ||| |||||||||||||||||||| ||||||||||| |||||    
T  739751 tatagtgccactatagctgctatttgacaatattttgtactatatagc 739704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 5730189 - 5730252
Alignment:
Q  79 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||| ||||||||||| ||||||||||||||||||||||    ||||| |||||||| ||||||    
T  5730189 agctactatttgacaagattttgtactaaatagcatatcatggaacaagagcgatttattcaaa 5730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 19391023 - 19390976
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 112  Q
    ||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  19391023 tatagcgccactataactgctatttgacaatactttgtactaaatagc 19390976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 30532117 - 30532188
Alignment:
Q  23 cagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaa 94  Q
    ||||| ||||| ||||||| ||||||| ||| || | |||| ||||||||||||||| | ||||||||||||    
T  30532117 cagaaaatagtggtttgttcgaattcctctacactacagtactatagcgcctctataaccgctatttgacaa 30532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 33260497 - 33260438
Alignment:
Q  48 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 107  Q
    |||||| |||||||| ||||||| || |||||| |||||||| ||||||||||| |||||    
T  33260497 ccgctacacaatagttttatagcaccactatagatgctatttcacaacattttgcactaa 33260438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 33851279 - 33851330
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 128  Q
    ||||| |||||||| ||||||||| |||||||||||||||  ||||||||||    
T  33851279 atagcagctatttggcaacattttatactaaatagcatatgacaaaacaata 33851330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 3737038 - 3736992
Alignment:
Q  98 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||| |||||||||||||| ||||||| | |||||||||||||    
T  3737038 tttgtactgaatagcatatcgcagaacaataacaatttgttcaaatt 3736992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 26494466 - 26494408
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||| |||||||||||||||  || ||| ||||||||| ||| |||||||||    
T  26494466 atttgacaacagtttgtactaaatagcgaattgcagaacaatagcaattagttcaaatt 26494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 31322702 - 31322632
Alignment:
Q  88 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||||||  ||||||  |||| || || |||| | ||||||||||||| |||||||||||||    
T  31322702 ttgacaacattttgtaagaaatagtgtatcacagaataataacaatttgttcaaattccactacgctatag 31322632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 31694723 - 31694797
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||| |||||||||||||||||||  |||| || |||||||||  |||||  ||||| |||||||| ||||    
T  31694723 ctatttgaaaacattttgtactaaatagtgtatcacagaacaatagcagtttgtctaaattccactacgccatag 31694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 33386254 - 33386192
Alignment:
Q  48 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 110  Q
    |||||| |||||||| |||||||||| ||||||  ||||||| ||||||||||| || |||||    
T  33386254 ccgctacacaatagttttatagcgccactatagaggctatttcacaacattttgaaccaaata 33386192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 2496447 - 2496383
Alignment:
Q  122 aacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 187  Q
    ||||| ||||||||||||||||| ||||| || ||||| |||  ||||||||||||| ||||||||    
T  2496447 aacaacagcgatttgttcaaattccactaagccatagt-gctgcaacgccgctatttgacaatatt 2496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 4354338 - 4354371
Alignment:
Q  78 tagctgctatttgacaacattttgtactaaatag 111  Q
    |||||||||||| |||||||||||||||||||||    
T  4354338 tagctgctattttacaacattttgtactaaatag 4354371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 9075271 - 9075206
Alignment:
Q  45 attccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 110  Q
    |||||| ||||||| |||  ||||||||| ||||| |  |||||||||||||||||||||| ||||    
T  9075271 attccgttatacaacagtgctatagcgccgctataacctctatttgacaacattttgtacttaata 9075206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 29404955 - 29405008
Alignment:
Q  93 aacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    |||| ||||||||||||| |||||||  |||||||||| |||| ||||||||||    
T  29404955 aacactttgtactaaataacatatcgtgaaacaatagcaattttttcaaatttc 29405008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 32392369 - 32392406
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagc 112  Q
    |||||||||||||||||||| | |||||||||||||||    
T  32392369 ctatagctgctatttgacaatactttgtactaaatagc 32392406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 24769369 - 24769309
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||| | ||||||||||||||  ||| ||| |||||||  ||||||||||||||    
T  24769369 ctatttgacaatactttgtactaaatagtgtattgcagaacaataatgatttgttcaaatt 24769309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 15606321 - 15606404
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| | |||||||    
T  15606321 ctatagctgttatttgacaacattttgtactaaatagcatatagcagaacaatagtgatttgtttaaatttcacaatgctatag 15606404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 7347777 - 7347693
Alignment:
Q  60 agtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||  ||| ||||||||||||| |||||||||||||    
T  7347777 agtactatagcgcctctatagccgctatttcacaatattttgtactaaatagtgtattgcaaaacaatagcaatttgttcaaatt 7347693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 6025952 - 6026031
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||  |||||||  ||||||||||||||||||||||||||||||||||||  ||||||| | |||||||||||||    
T  6025952 tatagcgctgctatagccactatttgacaacattttgtactaaatagcatatcgcggaacaataactatttgttcaaatt 6026031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 17473206 - 17473136
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||||||||  |||||| |||||||    
T  17473206 tatagcggctatttgacaatattttgtactaaatagcatattgcaaaacaatagcattttgtttaaatttc 17473136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 52517064 - 52517141
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||||||||||| ||||||||||||||| |||||| ||||| |||||| ||| ||||||||| |||||| ||||||||    
T  52517064 gctatttgacaatattttgtactaaataacatatcacaaaataatagcaattagttcaaattccactactctatagtg 52517141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 30882515 - 30882449
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  30882515 gctatttgacgtcattttgtactaa-tagcatatcgcaaaacaatagtgatttgttcaaattccacta 30882449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 44417857 - 44417783
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||| |||| |||||||| |||||| |||||||||| || ||||||||||||  ||||||||||||    
T  44417857 ctatttgacaacactttgcactaaataacatatcccaaaacaataacggtttgttcaaattctactacgctatag 44417783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 47847982 - 47848050
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||   |||||||||||||||||||||||    
T  47847982 ctatagccgctatttgacaacattttgtac-aaatggcatatcgtggaacaatagcgatttgttcaaatt 47848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 43391480 - 43391595
Alignment:
Q  29 atagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 128  Q
    |||| ||||||||||| ||| ||||| ||| |||  ||||||    ||||||| || ||||||||||||||||||||||||||   ||||   |||||||    
T  43391480 atagcagtttgtttgagttctgctatgcaacagtgctatagcaatgctatagccgccatttgacaacattttgtactaaatagtgcatcggggaacaata 43391579  T
Q  129 gcgatttgttcaaatt 144  Q
    ||||||||||||||||    
T  43391580 gcgatttgttcaaatt 43391595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 3240548 - 3240482
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 141  Q
    |||||||  ||||||||||||||| | || |||||||| |||||||||||||||| |||||||||||    
T  3240548 ctatagcctctatttgacaacattgtttaataaatagcgtatcgcaaaacaatagtgatttgttcaa 3240482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 15794165 - 15794004
Alignment:
Q  21 cgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 120  Q
    ||||||| |||||  |||||||||||||| ||| ||||||||  |||||||||  ||||||  | | | |||| |||||||||||||||||| |||| ||    
T  15794165 cgcagaaaatagtgatttgtttgaattccactacacaatagtgctatagcgccgttatagcaccgact-gacagcattttgtactaaatagcgtatctca 15794067  T
Q  121 aaacaatagcgatttgttcaaatttcactacgctatagtg--gctataacgccgctatttaacaa 183  Q
     ||||| |  ||| |||||||||| |||| |||||||| |  ||||||  |||||||||||||||    
T  15794066 gaacaaaaatgatctgttcaaattccactgcgctatagcgctgctata--gccgctatttaacaa 15794004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 15955961 - 15955893
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||| ||||||||||||||||||||| ||||||||  |||| || ||||| | |||||||||||||||    
T  15955961 tatagatgctatttgacaacattttgtcctaaatagtgtatcacataacaagaacgatttgttcaaatt 15955893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 32868328 - 32868272
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    ||||||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  32868328 atttgacaacaatttgcactaaatagtatattgcagaacaatagcgatttgttcaaa 32868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 33651715 - 33651660
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 139  Q
    ||||||||||||||||| ||||||||||||||| | | ||||||| ||||||||||    
T  33651715 ctatttgacaacattttatactaaatagcatattgtagaacaataacgatttgttc 33651660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 15592675 - 15592737
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 137  Q
    ||||||| ||||||||||||||||||  || ||||||||||| ||||||||| || |||||||    
T  15592675 ctatagccgctatttgacaacattttacaccaaatagcatattgcaaaacaagagtgatttgt 15592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 26161587 - 26161637
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcata 115  Q
    ||||||||  |||||||||||||||||||| | ||||||||||||||||||    
T  26161587 tatagcgcggctatagctgctatttgacaatactttgtactaaatagcata 26161637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 3950742 - 3950673
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| ||||||| |||  |||| |||||||||||| ||||||  |||||||| ||||||||||||||    
T  3950742 ctatagcagctatttcacattatttggtactaaatagcgtatcgcggaacaatagtgatttgttcaaatt 3950673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 7991597 - 7991516
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||| || |||||||||||| |||| ||| |||||||||| || |||| |  |||||||| | ||||||||||||||    
T  7991597 tatagcgccactctagctgctatttcacaatattatgtactaaatggcgtatcacggaacaatagtggtttgttcaaatttc 7991516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 15923758 - 15923827
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||| | |||||| || |||| ||||||  |||| |||||||||||||||| |||||||||    
T  15923758 ctatagctgctatctaacaacacttcgtacaaaatagtgtatcacaaaacaatagcgattagttcaaatt 15923827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 26360296 - 26360401
Alignment:
Q  56 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    |||||||| |||| |||| ||||||  ||||||||| | ||||||||||||||||| ||| ||   |||||| ||| ||||| |||||| ||| ||| ||    
T  26360296 caatagtactatatcgccactatagtcgctatttgatagcattttgtactaaatagtataccggggaacaattgcggtttgtccaaattccaccacgtta 26360395  T
Q  156 tagtgg 161  Q
    ||||||    
T  26360396 tagtgg 26360401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 32721482 - 32721421
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||||||||||||    ||||||||||||| | |||||||| ||||    
T  32721482 gctatttgacaacattttgtactaaatagtgcttcgcaaaacaataacaatttgttcgaatt 32721421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11766188 - 11766237
Alignment:
Q  93 aacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  11766188 aacactttgtactaaatagcatatc--aaaacaatagctatttgttcaaatt 11766237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 12764101 - 12764017
Alignment:
Q  60 agtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| ||||||||| ||||||| ||||||||  |||| || ||| |||||||||||| ||| ||||||||  ||||||| |||||    
T  12764101 agtactatagcgccactatagccgctatttggaaacacttcgtattaaatagcatattgcagaacaatagtaatttgttaaaatt 12764017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 28067557 - 28067473
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||||| ||| ||||| ||||| ||| ||||| ||||||||||||||| || |||||  ||||||| | ||| |||||||||    
T  28067557 tatagctgcaattcgacaatattttataccaaataacatatcgcaaaacaacagtgatttcatcaaattcccctatgctatagtg 28067473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 400972 - 400901
Alignment:
Q  67 tagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 138  Q
    ||||||| ||||| || ||||||||||| | |||||||||||| | |||||||| |||||| | ||||||||    
T  400972 tagcgccactataacttctatttgacaatactttgtactaaattgtatatcgcagaacaatggtgatttgtt 400901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 11049122 - 11049047
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||||||||||||||| || ||||||||||| ||||  |||||   | || |||||||||||||||||| |||||    
T  11049122 ctatagctgctatttgataagattttgtactagatagtgtatcgtggagcagtagcgatttgttcaaattccacta 11049047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 46331109 - 46331156
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||    
T  46331109 gctatttgacaccattttgtacttaatagcatatcataaaacaatagc 46331156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 3335211 - 3335145
Alignment:
Q  78 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||||| ||| ||||||| ||  | ||||  |||||||| ||||||||||||||    
T  3335211 tagctgctatttgacaacactttatactaaacagggtgtcgcggaacaatagtgatttgttcaaatt 3335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 4541638 - 4541583
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 141  Q
    ||||||||||||| |  |||| ||||||||||| ||||||||||| ||||||||||||    
T  4541638 ctatttgacaacact--gtaccaaatagcatattgcaaaacaataacgatttgttcaa 4541583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 15190929 - 15190855
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 157  Q
    ||||||||||||||||||||||| |||||  ||||| | ||||||||| |||| || ||||| | ||| ||||||    
T  15190929 gctatttgacaacattttgtactgaatagtgtatcgtagaacaatagcaatttctttaaattccgctaggctata 15190855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 15364936 - 15365009
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 141  Q
    ||||| |||| |||||| ||||||| |||||| |||||||||| ||   |||| |||||||||||| ||||||||||    
T  15364936 tatagtgcctgtatagccgctatttaacaacactttgtactaagta---tatcacaaaacaatagcaatttgttcaa 15365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 19392262 - 19392212
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 131  Q
    |||||||||||||| |||||||||| ||||| ||||||  |||||||||||    
T  19392262 ctgctatttgacaatattttgtacttaatagtatatcgtgaaacaatagcg 19392212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 50322108 - 50322030
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    |||||||| ||||||||| ||||| |||||||| |  ||||| | |||||||| | |||||||||||| ||||| ||||    
T  50322108 atagctgcaatttgacaatattttatactaaattgtgtatcgtagaacaatagtggtttgttcaaattccactatgcta 50322030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 14643201 - 14643262
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||| ||||| || ||||||||||| ||||||  |||||| || |||||||||||||    
T  14643201 gctatttgaaaacatcttctactaaatagcgtatcgctgaacaatggcaatttgttcaaatt 14643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 15956935 - 15956878
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||| ||||||||||||||| ||| ||  ||||||| | |||||||||||||    
T  15956935 tttgacaacactttgtactaaatagcgtatggcggaacaataacaatttgttcaaatt 15956878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 1880082 - 1880137
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 139  Q
    ||||||||||||||||||||||| |||||  |||| || ||||||||| ||||||||    
T  1880082 gctatttgacaacattttgtact-aatagagtatcacataacaatagcaatttgttc 1880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 46937630 - 46937570
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||| |||||||||||||||||  |||||  |||||||||  ||||||||||||    
T  46937630 ctatttcacaatattttgtactaaatagcgcatcgcggaacaatagcactttgttcaaatt 46937570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 48432631 - 48432703
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 159  Q
    |||||||||||| ||||||||||||| |||  ||||||||||| | | ||| ||||||   ||||||||||||    
T  48432631 tttgacaacattgtgtactaaatagcgtattacaaaacaatagtggtgtgtccaaattctgctacgctatagt 48432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 7245942 - 7246026
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| ||| ||| |||||||    
T  7245942 tatagccgctatttgacaacactttgtactaaatagcgtatcgcaaaagaatagcgatttgtttaaattccaccacggtatagtg 7246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 6894305 - 6894386
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||| ||||||||||||||||||||| |||||  ||| |  |||||||||| ||||||||||||| |||||||||||||    
T  6894305 atagctgttatttgacaacattttgtacttaatagtgtattgttaaacaatagcaatttgttcaaattccactacgctatag 6894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 1110401 - 1110471
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||| ||||||||||||||| || | ||||||||||||||| | |||||||||| |||||||||||||||    
T  1110401 tatagttgctatttgacaacacttagaactaaatagcatatcccgaaacaatagcaatttgttcaaatttc 1110471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 38774312 - 38774381
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||  |||||||| ||||||||||||||    
T  38774312 ctatagccgctatttgacaacatgatgtactaaatagcataacgctgaacaatagtgatttgttcaaatt 38774381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 24942574 - 24942499
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||    |||||||||||| ||||||    
T  24942574 tatagcgccgctacagctgctatttgacaacattttgtactaattagcgtatcatggaacaatagcgatctgttca 24942499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 2219525 - 2219599
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 157  Q
    |||||||||||| ||||||||||||||||||||||  | ||||||| |||| ||||||||||  ||||| |||||    
T  2219525 gctatttgacaatattttgtactaaatagcatatcagagaacaataacgatatgttcaaattctactacactata 2219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 30900051 - 30900173
Alignment:
Q  22 gcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaa 121  Q
    |||||| ||||| ||||| |  |||||||||||  || |||| |||||| || | |||||  |||||| |||| ||||||||||||||||  ||||||      
T  30900051 gcagaaaatagtggtttgctcaaattccgctatgtaacagtactatagcaccgcgatagccactatttcacaatattttgtactaaatagtgtatcgctg 30900150  T
Q  122 aacaatagcgatttgttcaaatt 144  Q
    ||||||||||||| |||||||||    
T  30900151 aacaatagcgattcgttcaaatt 30900173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 39417816 - 39417762
Alignment:
Q  90 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  39417816 gacaacattttgtactatatagcatatcgcggaacaatagtgatttgttcaaatt 39417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 23747392 - 23747323
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||  |||| ||||||| |||||||||| ||||||||| || ||||||||| |||||||||||||    
T  23747392 ctatagctattattcgacaacagtttgtactaactagcatatcacagaacaatagctatttgttcaaatt 23747323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 38921362 - 38921262
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    |||||||||| |||| | |  ||||||||| || ||||| ||| || |||| |||||| ||||||||| |||||||| ||||| || |||||||||||||    
T  38921362 aattccgctacacaacaatgctatagcgccactgtagctactacttcacaatattttgcactaaatagtatatcgcagaacaacagtgatttgttcaaat 38921263  T
Q  144 t 144  Q
    |    
T  38921262 t 38921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 1109354 - 1109412
Alignment:
Q  88 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||||||||||||||||||  ||||||  |||||| | ||||||||||||||||    
T  1109354 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 1109412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 13380968 - 13380906
Alignment:
Q  82 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| ||||||||||||||||||||||||||  || ||| |||| |||| |||||||||||||    
T  13380968 tgctgtttgacaacattttgtactaaatagcggatagcagaacagtagcaatttgttcaaatt 13380906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 21451517 - 21451571
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    |||||| |||||||||||| |||||||||||||| || ||||||| |||||||||    
T  21451517 tatagccgctatttgacaagattttgtactaaattgcgtatcgcagaacaatagc 21451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 23218571 - 23218681
Alignment:
Q  34 agtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgat 133  Q
    ||||||||| ||||||| ||| ||  |||  |||||||||  ||||  |||||||||||||||||||||| |||||||| ||||  | ||||||  ||||    
T  23218571 agtttgtttaaattccgttatgcagcagtgctatagcgccattatatttgctatttgacaacattttgtattaaatagcgtatcatagaacaatgacgat 23218670  T
Q  134 ttgttcaaatt 144  Q
    |||| ||||||    
T  23218671 ttgtccaaatt 23218681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 400623 - 400676
Alignment:
Q  105 taaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||||||| ||| | ||||||||||||||||||||| ||||||| |||||    
T  400623 taaatagcatattgcatagcaatagcgatttgttcaaattccactacgatatag 400676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 5260459 - 5260422
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagc 112  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5260459 ctatagctgctatttgacaatattttgtactaaatagc 5260422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 21450959 - 21451016
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||| | |||||||||||||||||||  || |||||||| ||||||||||||||    
T  21450959 tttgacaatagtttgtactaaatagcatattccagaacaatagtgatttgttcaaatt 21451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 8095955 - 8095907
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    |||||||| ||||||||||||||||||||||  |||||||| |||||||    
T  8095955 ctgctattcgacaacattttgtactaaatagtgtatcgcaacacaatag 8095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 23117360 - 23117420
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||||||||||| ||||||||||||||    || ||||||||||||||||||||    
T  23117360 ctatttcacaacattttgtgctaaatagcatatcatggaaaaatagcgatttgttcaaatt 23117420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 44124610 - 44124546
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    ||||||||| ||||| | |||||||||||| ||| ||||||||||||  ||||||| ||||||||    
T  44124610 tatagcgccgctatatcagctatttgacaatattctgtactaaatagtgtatcgcagaacaatag 44124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 1662624 - 1662703
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||| ||||||||||   | |||||||||||||||  ||||||||||  |||||| |||||||  ||||||||||||||    
T  1662624 tatagtgcctctatagtcaccatttgacaacatttttcactaaatagcgcatcgcagaacaataatgatttgttcaaatt 1662703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 10455141 - 10455094
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 112  Q
    ||||||||| ||||||| || ||||||||| |||||||||||||||||    
T  10455141 tatagcgccactatagccgcaatttgacaaaattttgtactaaatagc 10455094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 24673364 - 24673451
Alignment:
Q  23 cagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 110  Q
    ||||| ||||| |||||||  ||||| ||||| ||| |||  ||| | ||| ||||||| ||||||||||||||||||||||| ||||    
T  24673364 cagaaaatagtggtttgttcaaattcagctatgcaacagtgatatggtgccgctatagcggctatttgacaacattttgtactgaata 24673451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 33007893 - 33007955
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||||||||||||||||||| || |||||| ||||||  || ||||||| |||||||||||    
T  33007893 gctgctatttgacaacattttgtgct-aatagcttatcgcggaataatagcggtttgttcaaat 33007955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 37233781 - 37233722
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    ||||||||||||||||||||||||||||| |||||   ||||||| | || |||||||||    
T  37233781 gctatttgacaacattttgtactaaataggatatcctgaaacaattgtgaattgttcaaa 37233722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 38622871 - 38622954
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||    ||||||| |||||| ||||||||   |||||||||||    
T  38622871 ctatagccgctatttgacaacattttgtgctaaatagtgtatcatggaacaatatcgatttattcaaattctgctacgctatag 38622954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 7982345 - 7982415
Alignment:
Q  88 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| |||| | | |||||  |||| |||||||||||| ||||||||||||| ||||| |||||||    
T  7982345 ttgacaacaatttgcagtgaatagtgtatcacaaaacaatagcaatttgttcaaattccactatgctatag 7982415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 21343694 - 21343752
Alignment:
Q  100 tgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||  ||||||||||||| || |||||||||| ||| | |||||||||||    
T  21343694 tgtactaaatagtgtatcgcaaaacaacagtgatttgttcatattcctctacgctatag 21343752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 25268875 - 25268805
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 157  Q
    |||||||| ||||| ||||||||||  ||| ||| ||||||| |||||||||||||||   ||||||||||    
T  25268875 tttgacaatattttatactaaatagtgtatagcagaacaataacgatttgttcaaattctgctacgctata 25268805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 30885321 - 30885363
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaa 126  Q
    |||||||||||  |||||||||||||||||||||||| |||||    
T  30885321 ctatttgacaatgttttgtactaaatagcatatcgcagaacaa 30885363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 33581808 - 33581726
Alignment:
Q  64 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||| || |||| || ||||||||||||||| |||||  ||||||| |||| |  |||||| | ||||||||||||||||    
T  33581808 ttatagcaccactatggccgctatttgacaacatattgtatcaaatagcgtatcccgtaacaatggtgatttgttcaaatttc 33581726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 40869547 - 40869581
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaata 110  Q
    |||||| ||||||||||||||||||||||||||||    
T  40869547 tatagccgctatttgacaacattttgtactaaata 40869581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 30408257 - 30408321
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 151  Q
    |||||| ||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||| ||||    
T  30408257 atttgaaaacattttgtactaattagaatatcac-aaacaatagccacttgttcaaatttcgctac 30408321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 31838929 - 31838837
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||| || ||| ||||||||||  |||||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| | ||||| |||||||    
T  31838929 tatagcaccactagagctgctattgaacaacaatttgtactaaata-catattgcagaacaatagaaatttgttaaaactccactatgctatag 31838837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 32231823 - 32231762
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| |||| ||||||| ||||||| |||||| || |||| ||| ||||||||||||||    
T  32231823 gctatttcacaatattttgtgctaaataacatatcacagaacactagagatttgttcaaatt 32231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 32889016 - 32888963
Alignment:
Q  64 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatc 117  Q
    |||||||||| | |||||  ||||||||||| | ||||||||||||||||||||    
T  32889016 ttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatc 32888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 34925312 - 34925345
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaa 108  Q
    ||||||| ||||||||||||||||||||||||||    
T  34925312 ctatagccgctatttgacaacattttgtactaaa 34925345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 25314032 - 25314104
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 157  Q
    ||||| |||||| ||||||| ||||||  |||| || ||||||| ||||||||||||||| | ||| ||||||    
T  25314032 tatttaacaacactttgtaccaaatagtgtatcacagaacaataacgatttgttcaaattcctctatgctata 25314104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 11257789 - 11257714
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| | |||| ||||||    
T  11257789 gctatttgacaacattttgtactaaatagcatatcgtataacaatagcgatttgttcatattccgctacactatag 11257714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 21047059 - 21047136
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacg 152  Q
    ||||||| | |||||||||||||||| |||||||||||||||| |  |||||||| |||||  |||||||||||||||    
T  21047059 ctatagccgttatttgacaacattttttactaaatagcatatcacggaacaatagtgattttatcaaatttcactacg 21047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 39647139 - 39647188
Alignment:
Q  95 cattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39647139 cattttgtactaaatagcatatcgcagaacaataacgatttgttcaaatt 39647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 7430218 - 7430118
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    |||||||||| ||| |||| |||||||||  | ||||| ||||||||||||||| |||||||||||||| ||| |   |||||||||| ||||| |||||    
T  7430218 aattccgctacacagtagtgttatagcgctacaatagccgctatttgacaacatcttgtactaaatagcgtattgtggaacaatagcggtttgtccaaat 7430119  T
Q  144 t 144  Q
    |    
T  7430118 t 7430118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 27731590 - 27731654
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||| | |||||||||||||||||||||  ||||||||||| |||||| |||||    
T  27731590 gctgctatttgacaaaactttgtactaaatagcatatcggtaaacaatagcggtttgtttaaatt 27731654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 39159727 - 39159810
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||||||||||| ||||  |||||||||||| ||||||| || |||||||| | |||||| ||||| | |||||||||||    
T  39159727 ctatagctgctatttgtcaacgctttgtactaaattgcatatcacagaacaatagtggtttgttaaaattccgctacgctatag 39159810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 16973824 - 16973905
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 156  Q
    |||||||||||||||||||| ||||||||||||| | | ||||||  |||||||| ||||||||  |||| | |||||||||    
T  16973824 ctatagctgctatttgacaaaattttgtactaaacaacgtatcgcggaacaatagtgatttgtttgaattcctctacgctat 16973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 41894481 - 41894417
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||| |||||| |||||||| ||| ||| ||||||| | |||||||||||||    
T  41894481 gctgctatttgacaacactttgtagtaaatagcgtattgcagaacaataacaatttgttcaaatt 41894417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 40677960 - 40678061
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgcta 175  Q
    |||||| ||||||||||||| |||||||||||| |||| |||||| ||||||  |  |||||||||||| | ||| | |||| | |||||| ||||||||    
T  40677960 tatagccgctatttgacaactttttgtactaaacagcacatcgcagaacaattccagtttgttcaaattccgctaagttataat-gctatagcgccgcta 40678058  T
Q  176 ttt 178  Q
    |||    
T  40678059 ttt 40678061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 41015003 - 41015065
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||| |||||||| |||||||||||||||||||| |  |||||||||  |||||||||||||    
T  41015003 gctatatgacaacactttgtactaaatagcatatcacggaacaatagcagtttgttcaaattt 41015065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 6202658 - 6202589
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| |||||||||| |||   ||||||||||||||||||||| || | ||||||||||||||| |||||    
T  6202658 ctatggctgctatttcacattgttttgtactaaatagcatatcacatagcaatagcgatttgttaaaatt 6202589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 183
Target Start/End: Complemental strand, 6586627 - 6586482
Alignment:
Q  35 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatt 134  Q
    |||||||  |||||| |||| |||||||  ||||||| | ||||| | ||| |||||||| |||||| |||||||| ||||| |    ||||||||||||    
T  6586627 gtttgttcaaattcctctatgcaatagttctatagcggcactataaccgctgtttgacaatattttgcactaaataccatattgtgggacaatagcgatt 6586528  T
Q  135 tgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 183  Q
    |||| ||  | ||||| |||||||| ||||||  |||||||||||||||    
T  6586527 tgttgaatatccactatgctatagt-gctata--gccgctatttaacaa 6586482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 33342789 - 33342728
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||| | |||||||| |||||  ||||||| |||||||||||||| ||||||||    
T  33342789 gctatttgacaatactttgtacttaatagtgtatcgcataacaatagcgatttattcaaatt 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 41991254 - 41991173
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||  |||||| |||||||||||| || ||| ||| || |||| ||||||||| ||||| ||||| |||||||    
T  41991254 atagctgctattaaacaacactttgtactaaattgcgtatagcagaataatatcgatttgtttaaattccactatgctatag 41991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 43283418 - 43283491
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||||||||||||||| | ||||||| ||| ||  ||||| ||||||||||||||||| | ||| |||||||||    
T  43283418 tttgacaacattttgtcccaaatagcgtattgcggaacaacagcgatttgttcaaattacgctatgctatagtg 43283491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 31029638 - 31029562
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 159  Q
    |||||||||||||| ||||||| || ||  |||||||| ||||| || |||||| ||||||||| ||| ||||||||    
T  31029638 gctatttgacaacactttgtacaaagtaatatatcgcagaacaacagtgatttgatcaaatttctctaagctatagt 31029562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 34156779 - 34156643
Alignment:
Q  21 cgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 120  Q
    ||||||||||||  |||||||  ||||| ||||| ||| |||  |||||| |   ||||| |||||||| ||||||||||| |||||||||| |||| |     
T  34156779 cgcagaagatagctgtttgttcaaattctgctatgcaacagtgctatagcacaaatatagttgctatttaacaacattttgcactaaatagcgtatcacg 34156680  T
Q  121 aaacaatagcgatttgttcaaatttcactacgctata 157  Q
     | ||| ||||||| |||||||||   ||||||||||    
T  34156679 gagcaaaagcgattagttcaaattctgctacgctata 34156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 40991017 - 40990949
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacg 152  Q
    ||||||||||||||||||||||||||||| | || || || ||||||| |||||  ||||| |||||||    
T  40991017 ctatttgacaacattttgtactaaatagcgtgtcacagaagaatagcggtttgtctaaattccactacg 40990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 8977485 - 8977426
Alignment:
Q  121 aaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 183  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||||||  |||||||||||||||    
T  8977485 aaacactagtgatttgttcaaatttcgctacgctatagt-gctata--gccgctatttaacaa 8977426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 9446341 - 9446286
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    ||||||| ||||||| | || ||||||||||||||||||||| ||| |||||||||    
T  9446341 ctatagccgctatttcataatattttgtactaaatagcatattgcataacaatagc 9446286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 16033090 - 16033019
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||||||||||| |||| ||| ||  ||||| || |||||||||||||| |  ||||||||||    
T  16033090 tttgacaacattttgtactaagtagcgtattgcgtaacaaaagagatttgttcaaattccgatacgctatag 16033019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 29466250 - 29466168
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||| ||| |||||||||  |||||||||||||||||||||| |||||| || | ||| |||||||||| |||| | ||||||    
T  29466250 ctataactgttatttgacat-attttgtactaaatagcatatcacaaaacgatggtgatatgttcaaattccactccactatag 29466168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 17855260 - 17855226
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgc 119  Q
    |||||||||||||||||||||||| ||||||||||    
T  17855260 tatttgacaacattttgtactaaaaagcatatcgc 17855226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 18551479 - 18551549
Alignment:
Q  74 tctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||  ||||| |||||||| |||||||||||| ||||||| | ||||||||||  |||||| |||||    
T  18551479 tctatagacgctatatgacaacactttgtactaaattgcatatctcgaaacaatagctgtttgttaaaatt 18551549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 18839185 - 18839223
Alignment:
Q  122 aacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  18839185 aacaatagctatttgttcaaatatcactacgctatagtg 18839223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 19115099 - 19115160
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    |||||||||||| |||||||||||||| ||||| || |||||| ||| || ||||||||||||    
T  19115099 ctatttgacaacgttttgtactaaatatcatattgc-aaacaacagcaatctgttcaaatttc 19115160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 20981328 - 20981270
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||| ||||| ||||||||||| ||| ||| |||||||| |||| |||||||||    
T  20981328 atttgacaatattttatactaaatagcgtattgcagaacaatagtgattagttcaaatt 20981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 40213882 - 40213951
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||| | ||||||||||||||||||||| ||||| ||| ||  |||||||| ||||||||||| ||||    
T  40213882 tatagctaccatttgacaacattttgtactacatagcgtattgc-gaacaatagtgatttgttcaattttc 40213951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 41376333 - 41376402
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||||||||||| ||||  | ||||||||| ||||||||||||||||||| |  || |||||||||||    
T  41376333 ctatagctgctatttcacaatgtgttgtactaa-tagcatatcgcaaaacaatggacatatgttcaaattt 41376402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 1792110 - 1792139
Alignment:
Q  115 atcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||||||||||||||||    
T  1792110 atcgcaaaacaatagcgatttgttcaaatt 1792139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 7477556 - 7477621
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    |||||||||||| |||||||||||||| | |||||  |||||||| ||||| || ||||| |||||    
T  7477556 tatttgacaacactttgtactaaatagtaaatcgcggaacaatagtgatttattaaaattccacta 7477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 14956693 - 14956762
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||||||||||||||  | || |||||||| ||||| || || ||||| ||||||||||||||    
T  14956693 ctatagatgctatttgacaacacatagtgctaaatagaatatcacagaataatagtgatttgttcaaatt 14956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 38346923 - 38346862
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||||||| |||||||  |||| || |||||||| || || ||||||||    
T  38346923 gctatttgacaacattttgtagtaaatagtgtatcacagaacaatagtgactttttcaaatt 38346862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 39647243 - 39647296
Alignment:
Q  98 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 151  Q
    ||||| ||||| ||||||||||| ||||||| |||||| |||||||| ||||||    
T  39647243 tttgtgctaaacagcatatcgcagaacaataacgatttattcaaattccactac 39647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 631483 - 631527
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgc 119  Q
    ||||||| ||||| |||||| ||||||||||||||||| ||||||    
T  631483 ctatagccgctatatgacaatattttgtactaaatagcgtatcgc 631527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 4788021 - 4787945
Alignment:
Q  35 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatag 111  Q
    |||||||  ||||||| |||| || |||  ||||| |||| | ||||  ||||||||||||||||||||||||||||    
T  4788021 gtttgttcaaattccgatataaaacagtgctatagtgcctgtgtagccactatttgacaacattttgtactaaatag 4787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 13996378 - 13996410
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgc 119  Q
    |||||||||||||||||||||||||| ||||||    
T  13996378 tttgacaacattttgtactaaatagcgtatcgc 13996410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 34451993 - 34452045
Alignment:
Q  78 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    |||||| ||||| |||| | |||||||||||| ||||||||| ||||||||||    
T  34451993 tagctgatattttacaatactttgtactaaattgcatatcgctaaacaatagc 34452045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 37056430 - 37056370
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 141  Q
    ||||||||||||||||||| |||||||| ||| || | |  ||||||||| ||||||||||    
T  37056430 ctgctatttgacaacatttcgtactaaacagcgtaccacggaacaatagcaatttgttcaa 37056370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 41399570 - 41399598
Alignment:
Q  83 gctatttgacaacattttgtactaaatag 111  Q
    |||||||||||||||||||||||||||||    
T  41399570 gctatttgacaacattttgtactaaatag 41399598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 27318081 - 27317996
Alignment:
Q  37 ttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaa 122  Q
    |||||| ||||||||||  |||||||  ||||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  27318081 ttgtttaaattccgctaggcaatagttatatagcgccactatagccgctatttgacagcattttttactaaatagcatatagcaaa 27317996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 33958297 - 33958230
Alignment:
Q  88 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  33958297 ttgacaacattttgtattcaatagcatattgcagaacaatagcgagttgttcaaattccactacgcta 33958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 26174994 - 26174925
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||| ||||||||| ||||||||||||||    
T  26174994 ctatagctgctatttgacaacatattatactaaatagtgtatcgcagaacaatagc-atttgttcaaattt 26174925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 11530108 - 11530027
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||| ||| ||||||| ||||||| |||| ||| ||||||||||||  ||||||| |||||||| ||||||||||||||||    
T  11530108 tatagtgccactatagccgctatttcacaatattatgtactaaatagtgtatcgcagaacaatagtgatttgttcaaatttc 11530027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 41631885 - 41631944
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| ||||||||||||    
T  41631885 ctattcgacaacacttcgtactaaatagcatatcacaaaacaatagcaatttgttcaaat 41631944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 42616723 - 42616798
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||||||||   ||||||||||||||| | ||||||||    
T  42616723 tatagtgccactataactgctatttgacaacactttgtactaaatagtggatcgcaaaacaatagtggtttgttca 42616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 17442941 - 17443035
Alignment:
Q  55 acaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 149  Q
    |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||||| | ||   |  ||||||||| ||||||||||||| ||||    
T  17442941 acaatagttttatagcgccactatagatgctatttcacaacattttgcactaaatatcgtaattctgaacaatagcaatttgttcaaattccact 17443035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 44458225 - 44458305
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||||||||||| | |||||||||||||   ||||||  |||||||||| ||||||| |||| ||||| |||||||||    
T  44458225 gctgctatttgacaatactttgtactaaatattgtatcgcggaacaatagcggtttgttcgaattccactatgctatagtg 44458305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 4204949 - 4205011
Alignment:
Q  81 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||| |||||||||||||||| |  |||||||||| ||| ||||||||    
T  4204949 ctgctatttgacaacatttt-tactaaatagcatatcacggaacaatagcggttttttcaaatt 4205011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 18569490 - 18569435
Alignment:
Q  73 ctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 128  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||| || |||||||    
T  18569490 ctctatagcggctatttgacaacactttatactaaatagcatatcacagaacaata 18569435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 31790447 - 31790554
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||| ||||| ||||| |  ||||||||| ||||| |  |||| |||||||||||| ||||||||||  ||| ||| |||||||||  ||||| |||||    
T  31790447 aattctgctatgcaatactgatatagcgccactatatccactatatgacaacattttatactaaatagtgtatggcagaacaatagctgtttgtccaaat 31790546  T
Q  144 ttcactac 151  Q
    ||||||||    
T  31790547 ttcactac 31790554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 39597639 - 39597568
Alignment:
Q  82 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgc 153  Q
    |||||||| |||| ||||||||||||||||| ||||||  |||||||||||||| || ||||| | ||||||    
T  39597639 tgctatttcacaatattttgtactaaatagcgtatcgcggaacaatagcgatttatttaaattccgctacgc 39597568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 20547095 - 20547165
Alignment:
Q  88 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||||||| ||||| ||||||| ||| |||||| ||||||| |||||||| ||| || ||||||    
T  20547095 ttgacaacattttgtgctaaagagcatattgcagaacaatggcgatttcttcaaattccacaaccctatag 20547165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 2045047 - 2045133
Alignment:
Q  56 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||| ||| ||| ||||||||||||||||| || ||||  ||||||||||  |||  |||||||||| |||| ||||||||||    
T  2045047 caatagtattttagagccactatagctgctatttgataatattt--tactaaatagtgtataacaaaacaataacgatgtgttcaaatt 2045133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 11328188 - 11328128
Alignment:
Q  87 tttgacaacattttgtactaa--atagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    |||||||||||||||||||||  ||||||||| || | ||||||||||| |||||||||||    
T  11328188 tttgacaacattttgtactaataatagcatattgcgagacaatagcgatatgttcaaattt 11328128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 28044715 - 28044760
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  28044715 ctatttgacaacactttgtactaaatcgcatatcacaaaacaatag 28044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 28804405 - 28804336
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| | |||||||||| | ||||||||||||||| |||    ||||||||||||||||||||||||    
T  28804405 ctatagccgttatttgacaatactttgtactaaatagcttattctgaaacaatagcgatttgttcaaatt 28804336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 32321542 - 32321501
Alignment:
Q  66 atagcgcctctatagctgctatttgacaacattttgtactaa 107  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  32321542 atagcggcgctatagctgctatttgacaacattttgtactaa 32321501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 33971706 - 33971657
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcga 132  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||||||    
T  33971706 gctatttgacaacaatttgtactaaataggatattgcataacaatagcga 33971657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 3110516 - 3110568
Alignment:
Q  59 tagtattatagcgcctctatagctgctatttgacaacattttgtactaaatag 111  Q
    ||||||||||||||| |||||||  ||||||||||||  ||||||||||||||    
T  3110516 tagtattatagcgccgctatagccactatttgacaacgctttgtactaaatag 3110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 20265521 - 20265605
Alignment:
Q  74 tctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||| || || |||||||||| | |||||||| || |||||||||||| ||||| | ||| |||||| | |||||||||||    
T  20265521 tctatagcagcaatgtgacaacattgtatactaaattgcgtatcgcaaaacattagcggtgtgtccaaattccgctacgctatag 20265605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 29378577 - 29378509
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||||| ||||| | ||||||| ||||||| ||||||| ||||||| | |||||||||||||    
T  29378577 tatagccgctattagacaatactttgtacaaaatagcgtatcgcagaacaatatcaatttgttcaaatt 29378509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 29728827 - 29728763
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 139  Q
    ||||||| ||||||||| |||| ||||||||| || ||| ||||||||||||||||  |||||||    
T  29728827 ctatagccgctatttgagaacactttgtactacattgcaaatcgcaaaacaatagcagtttgttc 29728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 12750028 - 12749997
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatag 111  Q
    ||||||||||||||||||||||||||||||||    
T  12750028 gctgctatttgacaacattttgtactaaatag 12749997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 16733711 - 16733773
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    |||||||| |||| | |||||||||||||  |||||| ||||||||| |||| ||||||||||    
T  16733711 ctatttgaaaacactgtgtactaaatagcgaatcgcagaacaatagcaatttattcaaatttc 16733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 29415748 - 29415802
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 138  Q
    |||||||||||||||||||||| ||  ||||||| || ||||||||| |||||||    
T  29415748 ctatttgacaacattttgtactgaacggcatatcacagaacaatagcaatttgtt 29415802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 31235209 - 31235251
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcg 118  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||    
T  31235209 tatagctgctatttgacaacactttgaactaaattgcatatcg 31235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 18104112 - 18104051
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||| |||||| ||| |||||  |||||  ||||||||||||||||||| ||||    
T  18104112 gctatttgacaagattttgaactgaatagtgtatcgtgaaacaatagcgatttgttctaatt 18104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 25694401 - 25694470
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||  |||||||||||||||||||||| |||  | ||||||| ||| ||||||  |||||||||||    
T  25694401 ctatagcgtctatttgacaacattttgtactgaatcacttatcgcagaacgatagcgggttgttcaaatt 25694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 44460393 - 44460364
Alignment:
Q  82 tgctatttgacaacattttgtactaaatag 111  Q
    ||||||||||||||||||||||||||||||    
T  44460393 tgctatttgacaacattttgtactaaatag 44460364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 31246953 - 31246993
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatat 116  Q
    |||| ||||||||||||||||||||| ||||||| ||||||    
T  31246953 tataactgctatttgacaacattttgaactaaattgcatat 31246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 32562450 - 32562372
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    |||||||||| |||||| ||| ||||| ||||  |||||||||||||  ||||||| || ||||||||||| |||||||||    
T  32562450 tatagcgcctttatagc-gctgtttgataacaacttgtactaaatagtgtatcgcagaataatagcgattt-ttcaaattt 32562372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 33623675 - 33623735
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| |||||||| ||||||||||||||||||| |   |||||||| |||||||| |||||    
T  33623675 ctatatgacaacactttgtactaaatagcatatagtggaacaatagtgatttgttaaaatt 33623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 35538056 - 35538104
Alignment:
Q  68 agcgcctctatagctgctatttgacaacattttgtactaaatagcatat 116  Q
    |||||| ||||||| | ||||||||||||||||||| |||| |||||||    
T  35538056 agcgccgctatagccgttatttgacaacattttgtattaaagagcatat 35538104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 112
Target Start/End: Complemental strand, 36300442 - 36300414
Alignment:
Q  84 ctatttgacaacattttgtactaaatagc 112  Q
    |||||||||||||||||||||||||||||    
T  36300442 ctatttgacaacattttgtactaaatagc 36300414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 38475936 - 38475860
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 151  Q
    |||||||| |||||| |||||| ||||  ||| ||||||||||||  |||||||||||||  ||||| || ||||||    
T  38475936 ctatagctactatttaacaacactttgacctacatagcatatcgcggaacaatagcgattgattcaagttccactac 38475860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 42172801 - 42172865
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||||||| | | |||| ||| ||| ||| | | |||||||||||||||    
T  42172801 gctgctatttgacaacattttgtaattactagcgtatggcagaactacaacgatttgttcaaatt 42172865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 25252109 - 25252041
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||||| |||| ||||||||||||||||||||||| |||| | |||||| ||||||||||||||||    
T  25252109 ctatagctgttattagacaacattttgtactaaatagcgtatcacgaaacaagagcgatttgttcaaat 25252041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 32251006 - 32251078
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 156  Q
    |||||| ||| |||||||||||||||||| ||| ||| |||||||||||| ||||||||||||| ||||||||    
T  32251006 ctatttcacagcattttgtactaaatagcttattgcataacaatagcgatgtgttcaaatttcagtacgctat 32251078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 50402635 - 50402710
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||| ||||||||||    
T  50402635 tatagcgcagctatagctgctatttgacaacactttatactaaatagcatattgcggaacaatagtgatttgttca 50402710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 43381245 - 43381176
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||  || ||||||||||| ||||||||    
T  43381245 ctatagcttctatttgacaacattttgtattaaattgcatatcgcggaataatagcgatttattcaaatt 43381176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 15802637 - 15802573
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||| ||||||||| ||| ||||||||  || ||||||||||||||||||||    
T  15802637 gctgctatttgacaacactttgtactatataacatatcgcggaagaatagcgatttgttcaaatt 15802573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 38692427 - 38692510
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||| |||||||||||||| |||||||||||| |  ||| |||||||| ||||| |||||||||||| | |||| ||||||    
T  38692427 ctatagccgctatttgacaacactttgtactaaatcgtgtattgcaaaacactagcggtttgttcaaattccgctaccctatag 38692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 50251516 - 50251591
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgc 119  Q
    |||||||||| |||||| |  | |||||||  |||||| |||||||||||||||||| ||||||||||||||||||    
T  50251516 aattccgctacacaataatgctttagcgccgttatagcagctatttgacaacattttctactaaatagcatatcgc 50251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 53855744 - 53855791
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 130  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  53855744 gctatttgacaacattttgtactaaatagcatattgcagaacaatagc 53855791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 21754299 - 21754221
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 161  Q
    |||||||||||||| ||||||||||||||  ||||||  ||||||||||||||||  ||||||| ||||  ||||||||    
T  21754299 gctatttgacaacaatttgtactaaatagtgtatcgcggaacaatagcgatttgtctaaatttcgctacaatatagtgg 21754221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 25490602 - 25490545
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    
T  25490602 tatttgacaacattttgtactaaatatcatatcacagatcaatagtgatttgttcaaa 25490545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 14200053 - 14199985
Alignment:
Q  90 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||| ||||||| ||||||||||||||| |||| ||||  |||||||||||| ||||| |||||||    
T  14200053 gacaacactttgtaccaaatagcatatcgcagaacattagcagtttgttcaaattacactaagctatag 14199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 48236287 - 48236363
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||||||||||||||||  ||||||||||||||| | ||| || || |||||||||||||||| ||| | |||||||    
T  48236287 ctatttgacaacattttacactaaatagcatatcccgaaataacagtgatttgttcaaatttcgctatgttatagtg 48236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 10275819 - 10275894
Alignment:
Q  84 ctatttgacaacatttt-gtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||||| ||||| ||| |||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||    
T  10275819 ctatttgacaatatttttgtaataaatagcatatcgcagaacaacaatgatttgttcaaattccactatgctatag 10275894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 2990983 - 2991045
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||||||||||||||||||||||| |||||   ||||| ||  |||||||||||||||    
T  2990983 ctatttgacaacattttgtactaaatagcgtatcgtggaacaaaagaaatttgttcaaatttc 2991045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 6994393 - 6994327
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||||||||||||| ||| |||||||||||||| || |||||||| | |||||| ||||| |||||    
T  6994393 ctatttgacaacattctgtgctaaatagcatatcccataacaatagtgttttgtttaaattccacta 6994327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 11338573 - 11338510
Alignment:
Q  83 gctatttgacaacattttgtac--taaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||||   |||||||||||||||| ||||| ||||| |||| ||||||    
T  11338573 gctatttgacaacattttgtatattaaatagcatatcgcagaacaacagcgacttgtccaaatt 11338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 16169188 - 16169232
Alignment:
Q  99 ttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||    
T  16169188 ttgtactcaatagcatatcgcagaacaatagcgattagttcaaat 16169232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 29279293 - 29279205
Alignment:
Q  55 acaatagtattatagcgcctctatagctgctatttgacaacattttgtact-aaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||||||| |||||||||| | ||||| ||||||||||||| |  |||| | ||||| |||||| | ||||||||| ||||||||||||    
T  29279293 acaatagtgttatagcgccgccatagccgctatttgacaacttgctgtattaaaatatcatatcacgaaacaatagtgatttgttcaaa 29279205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 31386057 - 31386136
Alignment:
Q  64 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||  |||||||||| |||||||||||| |||| |||||||| | |||| ||||||| || | |||||||||||||    
T  31386057 ttatagcggttctatagctgttatttgacaacactttgaactaaataac-tatcacaaaacattaactatttgttcaaatt 31386136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 51295736 - 51295684
Alignment:
Q  90 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||||| |||||    
T  51295736 gacaacattttgtactaaatagcgtatcacgaaacaataacgatttgatcaaa 51295684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 54842196 - 54842244
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 131  Q
    |||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  54842196 gctatttgacaacattttatactaaatagcgtatcacagaacaatagcg 54842244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 27016927 - 27016970
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||    
T  27016927 atttgacaacattttgtactaaatagtatatcacaaaataatag 27016970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 20690081 - 20690139
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||||||| |||||||||  ||||||||  ||||||  |||||||||||||||||||||    
T  20690081 ctatttgataacattttgctctaaatagtgtatcgccgaacaatagcgatttgttcaaa 20690139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 42064218 - 42064160
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaa 123  Q
    ||||||||| | || || || ||||||||||| |||||||||||||||| |||||||||    
T  42064218 tatagcgccgcaatggcagccatttgacaacactttgtactaaatagcagatcgcaaaa 42064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 48198079 - 48198141
Alignment:
Q  98 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc-actacgctatagt 159  Q
    ||||||||||||| |||||| || ||||||||||||| ||||||| ||| |||| ||||||||    
T  48198079 tttgtactaaataacatatcacagaacaatagcgattagttcaaaattctactaagctatagt 48198141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 1813349 - 1813265
Alignment:
Q  64 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 149  Q
    |||||| ||| |||||||  ||||||||||||| || || |||| | |||||||||  |||||||| |||||||||||||| ||||    
T  1813349 ttatagtgccgctatagccactatttgacaacacttcgtgctaa-tggcatatcgcggaacaatagtgatttgttcaaattccact 1813265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 24830196 - 24830135
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    |||||||||||||||| ||||||||||  ||| | | |||||||||||||| ||||| ||||    
T  24830196 tatttgacaacattttatactaaatagtgtattgtagaacaatagcgattttttcaactttc 24830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 32954328 - 32954243
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 161  Q
    ||||||| |||| |||||||||||||||||||||||| ||| |   || || ||| |||||| |||||| | ||| ||||||||||    
T  32954328 tatagcttctatatgacaacattttgtactaaatagcgtattgtggaataaaagcaatttgtccaaattccgctatgctatagtgg 32954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 39544208 - 39544175
Alignment:
Q  78 tagctgctatttgacaacattttgtactaaatag 111  Q
    |||||||| |||||||||||||||||||||||||    
T  39544208 tagctgctctttgacaacattttgtactaaatag 39544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 43307600 - 43307673
Alignment:
Q  56 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 129  Q
    |||||||  ||||||||| ||||| |  |||| | |||||||||||||||||| ||| |||| |||||||||||    
T  43307600 caatagtgctatagcgccactataaccactatctaacaacattttgtactaaacagcgtatcacaaaacaatag 43307673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 50376231 - 50376264
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaa 108  Q
    ||||||| ||||||||||||||||||||||||||    
T  50376231 ctatagccgctatttgacaacattttgtactaaa 50376264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 162963 - 162903
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||| |||||||||||||||||  |||||| || |||| | |||||||||||||    
T  162963 ctatttcacaatattttgtactaaatagcgcatcgcagaataataacaatttgttcaaatt 162903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 29208325 - 29208265
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| | |||||||||||||||| ||| |||||   ||||||| |||||||||||||||    
T  29208325 ctatttcaaaacattttgtactaaacagcgtatcgtggaacaataacgatttgttcaaatt 29208265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 34363284 - 34363256
Alignment:
Q  83 gctatttgacaacattttgtactaaatag 111  Q
    |||||||||||||||||||||||||||||    
T  34363284 gctatttgacaacattttgtactaaatag 34363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 33120560 - 33120617
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||    
T  33120560 gctatttgacaacattttgtactaaatagcatattgcagaacaacaacgatttgttca 33120617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 2302706 - 2302766
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||| |||||||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  2302706 ctatttgataacattttgtactaaataacatatcgcctaacaatatcgatttgttcaaatt 2302766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 27483149 - 27483037
Alignment:
Q  46 ttccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||| | |||||||  ||||| ||| ||||||| |||||||||||| ||||||||||  ||||| |||| || || ||||||| ||||||||||||     
T  27483149 ttccgctgtgcaatagtgctatagtgccactatagccgctatttgacaatattttgtactggatagcgtatctcagaataatagcggtttgttcaaattc 27483050  T
Q  146 cactacgctatag 158  Q
    | ||||| |||||    
T  27483049 ctctacgttatag 27483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 30560179 - 30560088
Alignment:
Q  54 tacaatagtattatagcgcctctatagctgctatttgacaaca-ttttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||  ||||| ||| |||||||||| ||||||||||| |||| ||||||||||  |||||||||||||||| | ||||| ||||||    
T  30560179 tacaatagtgctatagtgccactatagctgcaatttgacaacatttttttactaaatagtgtatcgcaaaacaatagtggtttgtccaaatt 30560088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 26273036 - 26273114
Alignment:
Q  80 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| ||||||| ||||||||||| ||| |||| || |||||||| ||||| |||||||| | |||||||||||    
T  26273036 gctgctattggacaacactttgtactaaacagcgtatcacagaacaatagtgatttattcaaattcctctacgctatag 26273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 8282849 - 8282910
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||| ||||||||||| ||||| ||||||| ||| |||||||| |||||||||||||    
T  8282849 gctatttgagaacattttgtaataaatcgcatatcacaagacaatagctatttgttcaaatt 8282910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 21227004 - 21226911
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||  ||||||| ||||||||||||||||||||||| |||||| ||| |   |||||||||  |||||||||||| | ||| |||||||    
T  21227004 tatagcgctactatagcagctatttgacaacattttgtactgaatagcgtatggaggaacaatagctttttgttcaaattccgctatgctatag 21226911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 37632120 - 37632205
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||||||||||||| | ||||||||| |||||||| |||||   |||| || |||||||||| |||| ||||||||| |||||    
T  37632120 ctatagctgctatttgataccattttgtaataaatagcgtatcgtggaacagtaacgatttgttccaattccactacgctgtagtg 37632205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 45371098 - 45371159
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||| | ||||| ||||||    
T  45371098 gctatttgacaacattttgtactaaatagcatattgcggaacaatagtggtttgtccaaatt 45371159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 4050511 - 4050427
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcga-tttgttcaaatttcactacgctatagt 159  Q
    |||| |||||||||||||| |||||| |||||||||||||| |  |||||||| ||| ||| |||||||| | ||||||||||||    
T  4050511 tatacctgctatttgacaatattttggactaaatagcatatggtgaaacaataacgatttttttcaaattccgctacgctatagt 4050427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 27400604 - 27400521
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||| |||||||| | ||||||||||  ||||||||  ||  ||||||||||||||||||||||| ||| | |||||||||    
T  27400604 atagctgttatttgacgatattttgtactttatagcatactgcggaacaatagcgatttgttcaaattccaccatgctatagtg 27400521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 13869826 - 13869884
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaa 123  Q
    |||||| ||||||| ||  || ||||||||||||||||||||||||||||||| |||||    
T  13869826 tatagcacctctattgccactgtttgacaacattttgtactaaatagcatatcacaaaa 13869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 30692459 - 30692517
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 141  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||  | |||||||||    
T  30692459 gctatttgacaacactttgtactacatagcatatggcaaaacaatattggtttgttcaa 30692517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 29749300 - 29749219
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||  ||||| ||||||||| |||||| ||| |||||  || |||||| ||||||||||  ||||||||||||||||    
T  29749300 tatagcgctgctataactgctatttaacaacactttttactagttaacatatcacaaaacaataatgatttgttcaaatttc 29749219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3556650 - 3556718
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagc 112  Q
    |||||||||| ||||| || |||||||||| || || |  ||||||||||||||||||| |||||||||    
T  3556650 aattccgctacacaatggtgttatagcgccactgtaacaactatttgacaacattttgtgctaaatagc 3556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 24857327 - 24857430
Alignment:
Q  79 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctattt 178  Q
    |||| ||||||||||||||||||||| ||||||||||||    || ||| |||||||||| |||||   | | |||||||| |||||| |||||| ||||    
T  24857327 agcttctatttgacaacattttgtacaaaatagcatatcatggaagaatggcgatttgttaaaattctgcaaagctatagt-gctatagcgccgccattt 24857425  T
Q  179 aacaa 183  Q
    |||||    
T  24857426 aacaa 24857430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 40710077 - 40710160
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 149  Q
    |||||| || |||||||||||||| | |||||||||||||| |||| || |||||| |||||||   ||||||||||||| ||||    
T  40710077 tatagcaccactatagctgctattagtcaacattttgtact-aataacacatcgcataacaataataatttgttcaaattccact 40710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 13850991 - 13851079
Alignment:
Q  66 atagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 156  Q
    ||||| ||||||| ||  |||||||| ||||||||||||||||||| ||||| ||||  |||||| | ||| ||||||| | |||||||||    
T  13850991 atagcacctctattgccactatttgataacattttgtactaaatagtatatcacaaa--aatagcaacttgctcaaattcctctacgctat 13851079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 18737733 - 18737690
Alignment:
Q  103 actaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||||||||| | |||||||||| |||||||||||||||    
T  18737733 actaaatagcatatcccgaaacaatagcaatttgttcaaatttc 18737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 24855531 - 24855602
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 156  Q
    ||||||||||  ||| ||||||||||| |||  ||| |||||||| |||||||||||||| | |||||||||    
T  24855531 tatttgacaatttttagtactaaatagtatactgcagaacaatagtgatttgttcaaattccgctacgctat 24855602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 26445499 - 26445574
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 140  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||   ||| | |||||| || ||||||||||    
T  26445499 tatagcgccactataactgctatttgacaacgctttgtactaaatagtggatcacgaaacaaaagtgatttgttca 26445574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 32616769 - 32616828
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||||||||| | |||||||||||||||||| |||| |||  |||| ||||||||||||    
T  32616769 ctatttgacaatactttgtactaaatagcataacgcagaactgtagcaatttgttcaaat 32616828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 44617732 - 44617697
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatag 111  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44617732 tatagctgctatttgacaacactttgtactaaatag 44617697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 9112478 - 9112412
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    |||||| |||| ||| ||||||||||||||||||||| |||||||| ||| || | ||||| |||||    
T  9112478 ctatttcacaatattctgtactaaatagcatatcgcagaacaatagtgatctggttaaattccacta 9112412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 12196992 - 12196923
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||||||||||| ||||||  |||||||||| | ||||| || ||||||||||| |||||| ||||||    
T  12196992 ctatagctgctattttacaacacattgtactaaaca-catatagcgaaacaatagcggtttgttaaaattt 12196923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 12441420 - 12441351
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||||||||||| ||||||  |||||||||| | ||||| || ||||||||||| |||||| ||||||    
T  12441420 ctatagctgctattttacaacacattgtactaaaca-catatagcgaaacaatagcggtttgttaaaattt 12441351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 2701749 - 2701657
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| ||||| | |||||  ||||| | ||||||| ||||||||||| ||  |||| |||||||||||||| ||| | |||||||||||    
T  2701749 tatagcgccgctataacggctatc-gacaataatttgtacaaaatagcatattgcggaacattagcgatttgttcatattccgctacgctatag 2701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 4114796 - 4114736
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||||||||||| ||| || | ||||| | |||||||| ||||||||||||||    
T  4114796 gctatttgacaacattttgtagtaacta-cttatcgtagaacaatagtgatttgttcaaatt 4114736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 14928232 - 14928301
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    ||||||||||| |||||||| |||||| ||||    |||||||  |||||||||||||||||||| ||||    
T  14928232 atttgacaacactttgtacttaatagcgtatcatgtaacaataaagatttgttcaaatttcactaagcta 14928301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 16950318 - 16950289
Alignment:
Q  81 ctgctatttgacaacattttgtactaaata 110  Q
    ||||||||||||||||||||||||||||||    
T  16950318 ctgctatttgacaacattttgtactaaata 16950289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 42843424 - 42843363
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    ||||||||||||| ||| |||| |||||| |||| |  ||||||||| ||||||||||||||    
T  42843424 ctatttgacaacaatttatacttaatagcttatcccggaacaatagcaatttgttcaaattt 42843363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 44806319 - 44806258
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||| ||||||||||||||| |||||  ||| | ||||  ||||||||||||    
T  44806319 gctatttgacaacactttgtactaaatagcctatcgtgaaatagtagcagtttgttcaaatt 44806258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 1318620 - 1318716
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact-acgctatagtg 160  Q
    ||||||| | ||| ||||||||||||||||||| | || ||||||||| ||| ||  |||||||  || ||||||||||| || | |||||||||||    
T  1318620 tatagcgtcactacagctgctatttgacaacatgtagttctaaatagcttattgcggaacaataaggacttgttcaaattccattcacgctatagtg 1318716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 3238297 - 3238345
Alignment:
Q  96 attttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||| || ||||| ||| ||||||||||||| |||||||||    
T  3238297 attttgtactaattaacatattgcagaacaatagcgattagttcaaatt 3238345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 8284356 - 8284420
Alignment:
Q  91 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 155  Q
    |||||| ||||||||||| ||| ||||||  |||||| | |||||||||||||| ||||| ||||    
T  8284356 acaacactttgtactaaaaagcgtatcgcggaacaatggtgatttgttcaaattccactatgcta 8284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 12856408 - 12856481
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||| |||| | ||||||||||||||| ||||| ||  |||| || ||||||||||||| ||||||| |||||||    
T  12856408 tatttaacaatagtttgtactaaatagcgtatcgtaa--caattgcaatttgttcaaattccactacggtatagtg 12856481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 14730378 - 14730294
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 159  Q
    |||||| ||||||||||||  | |||||||||| ||| |||| | | ||||| |||||| || ||||||||| | ||||||||||    
T  14730378 ctatagatgctatttgacagtactttgtactaagtagtatattgtagaacaacagcgatctgatcaaatttcgccacgctatagt 14730294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 39551021 - 39550949
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 137  Q
    ||||| ||| ||||||| |||||||||||||| ||  |||| |||||  |||| ||||||||||||| |||||    
T  39551021 tatagtgccactatagccgctatttgacaacacttcatactcaatagtgtatcacaaaacaatagcggtttgt 39550949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 43935142 - 43935226
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||| |||||||| |||| ||||||| ||||| ||| |||| |  ||||||||  ||||||||||||| ||||| || ||||||    
T  43935142 tatagttgctatttcacaatattttgtgctaaacagcgtatcacggaacaatagtcatttgttcaaattccactatgcaatagtg 43935226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 415214 - 415145
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||  |||||| ||||||||||||||||||||||| ||| | |||||||||||| |||||||||||    
T  415214 ctatagcaactatttcacaacattttgtactaaatagcaaatcacgaaacaatagcgacttgttcaaatt 415145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 55314554 - 55314493
Alignment:
Q  86 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttca 147  Q
    |||||| |||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  55314554 atttgataacactttgtactaattagcatatcgcagaacaatagcaatttgttcaaatttca 55314493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 13298589 - 13298529
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||| || |||||||||||||||||||| || |||||||| ||||||||||||||    
T  13298589 ctatttgacagcactttgtactaaatagcatatcacagaacaatagtgatttgttcaaatt 13298529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 50794643 - 50794568
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    ||||| |||||||||||||||| |||||||||| |||||||  ||| ||||||  ||||||||||||||| |||||    
T  50794643 ctataactgctatttgacaacactttgtactaactagcatagtgcagaacaatgacgatttgttcaaattccacta 50794568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 34581658 - 34581592
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 131  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||| |||| |  ||||||||||    
T  34581658 tatagcgctactatagccgctatttgacaacattttgtactaaatagcgtatcacggaacaatagcg 34581592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 2843583 - 2843636
Alignment:
Q  85 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 138  Q
    |||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  2843583 tatttgacaacattttgtactaaatagtgtatcgcagaacaatagtgatttgtt 2843636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 3301608 - 3301687
Alignment:
Q  65 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| | ||||||||||||||| |||| || |||||||||||||  ||||||||||||| ||| | || ||||||||    
T  3301608 tatagcgtcactatagctgctatttaacaaaatattgtactaaatagagtatcgcaaaacaacagcaaatttttcaaatt 3301687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 17223482 - 17223403
Alignment:
Q  79 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| |||||||| |||||||||||| |  ||||||||||||| | | ||||||| ||||| | |||||||||||    
T  17223482 agctgctatatgacaacaatttgtactaaatcgtgtatcgcaaaacaacaacaatttgttaaaattccgctacgctatag 17223403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 20709960 - 20710031
Alignment:
Q  87 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||| | ||||| |||||    
T  20709960 tttgataacactttgcactaaatagcgtattgcagaacaatagcgatttgttcaaattccgctacgttatag 20710031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 25402909 - 25402826
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||| ||||||||||||||||||||||| || ||| | ||||   ||||||||||||| ||||||||||   |||||||||||    
T  25402909 ctataactgctatttgacaacattttgtattacatatcgtatcattaaacaatagcgatctgttcaaattctgctacgctatag 25402826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 31675030 - 31675093
Alignment:
Q  72 cctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgattt 135  Q
    ||||||||||| | ||||||||||||||||||||||||| | |||| ||| |||||||| ||||    
T  31675030 cctctatagctccaatttgacaacattttgtactaaataacgtatcacaagacaatagcaattt 31675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 27722407 - 27722473
Alignment:
Q  78 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||||||||| |||||||||| ||||||||||||   ||||||||| ||| |||||||||    
T  27722407 tagctgatatttgacaatattttgtacttaatagcatatcgtggaacaatagcaattagttcaaatt 27722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 34417889 - 34417827
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 139  Q
    ||||| |||||||||||||| ||||||||||||||   |||||| ||||||||| ||||||||    
T  34417889 atagcggctatttgacaacactttgtactaaatagaggatcgcagaacaatagctatttgttc 34417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 3144586 - 3144541
Alignment:
Q  66 atagcgcctctatagctgctatttgacaacattttgtactaaatag 111  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||    
T  3144586 atagcgcctctatcgctgccagttgacaacattttgtactaaatag 3144541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 37538484 - 37538421
Alignment:
Q  84 ctatttgacaacattttgtacta---aatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||| |||||| ||   | ||||||| ||||||||||||||||||||||||||||    
T  37538484 ctatttgacaacactttgtaatagtaagtagcataccgcaaaacaatagcgatttgttcaaatt 37538421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 37579590 - 37579651
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||| || |||||||||||||||||||  ||||||| |||||| || |||||    
T  37579590 gctatttgacaacacttagtactaaatagcatatcgcggaacaataacgatttattaaaatt 37579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 48244443 - 48244508
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 149  Q
    ||||||||||||||  ||||||||| ||  ||||||| ||||||||||||||||| ||||| ||||    
T  48244443 ctatttgacaacatactgtactaaacagtgtatcgcagaacaatagcgatttgtttaaattccact 48244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 56049770 - 56049815
Alignment:
Q  64 ttatagcgcctctatagctgctatttgacaacattttgtactaaat 109  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||    
T  56049770 ttatagcgctactatagctgctatttgacaacactttgtactaaat 56049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 1202394 - 1202434
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaa 123  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  1202394 gctatttgacaatattttatactaaatagcatatcgcaaaa 1202434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 1276986 - 1276902
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    ||||||||||||||||||| | ||| |||| || ||| |||| || |||||||| | |||||||||||||| ||| | |||||||    
T  1276986 tatagctgctatttgacaaaactttttactgaacagcgtatcacataacaatagtggtttgttcaaatttccctatgatatagtg 1276902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 2562550 - 2562482
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||||||||  |||||||||||| ||| ||||   |||  |||||||||||||||||||    
T  2562550 tatagctgctatttgacaatgttttgtactaaacagcgtatcaggaaattatagcgatttgttcaaatt 2562482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 20989561 - 20989525
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatag 111  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20989561 ctatagccgctatttgacaacattttgtactaaatag 20989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 39032511 - 39032635
Alignment:
Q  34 agtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgat 133  Q
    ||||||||  ||||| ||||  |||||||  ||||||||| || ||||   |||| ||||||||||||||| ||||| |||||| |  | || ||||| |    
T  39032511 agtttgttgaaattctgctacgcaatagtgctatagcgcccctgtagccattattcgacaacattttgtaccaaataacatatcacggagcattagcggt 39032610  T
Q  134 ttgttcaaatttcactacgctatag 158  Q
    ||||||||| | |||||||||||||    
T  39032611 ttgttcaaactccactacgctatag 39032635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 7295160 - 7295045
Alignment:
Q  29 atagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 128  Q
    |||||||||||||  | |||||| | || | |||| |||||||||| | ||||  ||  |||||||  ||||| | |||||||| |||| ||||||||||    
T  7295160 atagtagtttgttcaagttccgcgacactacagtactatagcgcctttgtagccacttattgacaatgttttgcattaaatagcctatcacaaaacaata 7295061  T
Q  129 gcgatttgttcaaatt 144  Q
    | ||||||||||||||    
T  7295060 gtgatttgttcaaatt 7295045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 13458783 - 13458866
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 160  Q
    |||| ||| ||||||||||| ||| ||||||||||| |||  |  |||||| | |||||||||||||||||||| | |||||||    
T  13458783 atagttgccatttgacaacactttatactaaatagcgtattacggaacaatggtgatttgttcaaatttcactatgatatagtg 13458866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 18968343 - 18968308
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatag 111  Q
    |||||| |||||||||||||||||||||||||||||    
T  18968343 tatagccgctatttgacaacattttgtactaaatag 18968308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 19062218 - 19062274
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||||| |||| | |||||||||||||||||||  ||||||||||| ||||||||||||    
T  19062218 ctattttacaaaactttgtactaaatagcatat--caaaacaatagagatttgttcaaa 19062274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 39064896 - 39064935
Alignment:
Q  119 caaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  39064896 caaaacaatagcaatttgttcaaattccactacgctatag 39064935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 47789232 - 47789165
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    |||||||  ||||||||||||| ||||||||||||||  ||| ||| ||| ||| |||||||||||||    
T  47789232 ctatagccactatttgacaacagtttgtactaaatagagtattgcagaacgataacgatttgttcaaa 47789165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 26275534 - 26275600
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 143  Q
    ||||| ||||||| |||| ||||||||||||||||| |||     ||||||||||||||||||||||    
T  26275534 atagccgctatttcacaatattttgtactaaatagcgtattttggaacaatagcgatttgttcaaat 26275600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 33714228 - 33714294
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 150  Q
    |||||| |||| |||||||||||||| || |||||   ||||| ||||||||||||||||| |||||    
T  33714228 ctatttcacaatattttgtactaaatggcttatcgtggaacaacagcgatttgttcaaattccacta 33714294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 34417400 - 34417346
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 131  Q
    ||||| |||||||||||||| |||||||||||||||  |||||  ||||||||||    
T  34417400 atagcggctatttgacaacactttgtactaaatagcggatcgcggaacaatagcg 34417346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 38596771 - 38596717
Alignment:
Q  91 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 145  Q
    |||| |||||||||| |||||  |||||||||||| ||||||||| |||||||||    
T  38596771 acaatattttgtactgaatagtgtatcgcaaaacagtagcgatttcttcaaattt 38596717  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 4762551 - 4762580
Alignment:
Q  83 gctatttgacaacattttgtactaaatagc 112  Q
    ||||||||||||||||||||||||||||||    
T  4762551 gctatttgacaacattttgtactaaatagc 4762580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 9318759 - 9318706
Alignment:
Q  91 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||| |||||||||||||||||||||| | ||||||||   |||||||||||||    
T  9318759 acaatattttgtactaaatagcatatcactaaacaatatgaatttgttcaaatt 9318706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 27099033 - 27098969
Alignment:
Q  122 aacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 187  Q
    ||||| ||||||||||||||||| ||||| || ||||| |||  ||||||||||||| ||||||||    
T  27099033 aacaacagcgatttgttcaaattccactaagccatagt-gctgcaacgccgctatttgacaatatt 27098969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 47486045 - 47486106
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||| | || ||||||||||||||||||| ||||  |||||||| | ||||||||||||    
T  47486045 gctatttcaaaatattttgtactaaatagcatgtcgcggaacaatagaggtttgttcaaatt 47486106  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 53768201 - 53768266
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 142  Q
    ||||||||||||||||||||  |||||||| |||||| |||    |||||||||| ||||||||||    
T  53768201 atagctgctatttgacaacacgttgtactatatagcagatcatggaacaatagcggtttgttcaaa 53768266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 682030 - 681986
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaata 128  Q
    |||||||||||||| ||||||||| ||||| |||||| |||||||    
T  682030 ctatttgacaacatgttgtactaactagcacatcgcagaacaata 681986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 3625804 - 3625744
Alignment:
Q  98 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 158  Q
    ||||||||| | ||| ||| ||| |||||||||||| |||||||||| |||||| ||||||    
T  3625804 tttgtactacacagcgtattgcagaacaatagcgatctgttcaaattccactacactatag 3625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 8721885 - 8721961
Alignment:
Q  44 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 120  Q
    ||||||||||  |||||||   |||||| | |||||||| | ||| ||||| ||||||||||||||||| |||||||    
T  8721885 aattccgctacgcaatagtgccatagcgacactatagcttccattcgacaatattttgtactaaatagcgtatcgca 8721961  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 30617270 - 30617329
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||| |||| |||||||||||| |||| |||| || |||| ||||||||||||||||||    
T  30617270 ctatttcacaatattttgtactaa-tagcgtatcacagaacactagcgatttgttcaaatt 30617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 34416967 - 34416907
Alignment:
Q  84 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    ||||||||||||| ||||||||||||||   |||||  ||||||||| |||||||| ||||    
T  34416967 ctatttgacaacactttgtactaaatagaggatcgcggaacaatagctatttgttccaatt 34416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 37854003 - 37854047
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatagcatatcgc 119  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||    
T  37854003 ctatagcttctatttaacaaaattttatactaaatagcatatcgc 37854047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 41367233 - 41367197
Alignment:
Q  75 ctatagctgctatttgacaacattttgtactaaatag 111  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41367233 ctataactgctatttggcaacattttgtactaaatag 41367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 11459 - 11518
Alignment:
Q  48 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 107  Q
    |||||| |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||    
T  11459 ccgctacacaatagttttatagcgccactatagatgctatttcacaacattttgcactaa 11518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 4553 - 4494
Alignment:
Q  48 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 107  Q
    |||||| |||||||| ||||||| || |||||| |||||||| ||||||||||| |||||    
T  4553 ccgctacacaatagttttatagcaccactatagatgctatttcacaacattttgcactaa 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 2113 - 2031
Alignment:
Q  77 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 159  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| ||||| |  | ||||| |||||||| ||| | ||||||    
T  2113 atagcagctatttgacaacactttgtattaaatagcatatcgcagaacaacaatggtttgtccaaatttcgctatgatatagt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 4432 - 4389
Alignment:
Q  103 actaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 146  Q
    ||||||||||||||| | |||||||||| |||||||||||||||    
T  4432 actaaatagcatatcccgaaacaatagcaatttgttcaaatttc 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 96735 - 96701
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaata 110  Q
    |||||| ||||||||||||||||||||||||||||    
T  96735 tatagccgctatttgacaacattttgtactaaata 96701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0898 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 594 - 534
Alignment:
Q  83 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||||||||| ||||||||||||||| |||| || |||||||| | |||||| |||||    
T  594 gctatttgacaacaatttgtactaaatagc-tatcccagaacaatagaggtttgtttaaatt 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 13854 - 13786
Alignment:
Q  76 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 144  Q
    |||||||| |||||||||||| | |||||||||  |||||| |   |||||||| ||||||||||||||    
T  13854 tatagctgttatttgacaacactatgtactaaacggcatattgtggaacaatagagatttgttcaaatt 13786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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