View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6091_high_1 (Length: 555)
Name: NF6091_high_1
Description: NF6091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6091_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 489; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 46 - 547
Target Start/End: Original strand, 37233882 - 37234385
Alignment:
| Q |
46 |
gacataaacatgaatgaacaattttctattccaatactaaactaacaacaaaa--ttctaaagcagataagaaaaactaaccaggtgaacattttggagc |
143 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37233882 |
gacataaacatgaatgaacaattttctattccaatagtaaactaacaacaaaacattctaaagcagataagaaaaactaaccaggtgaacattttggagc |
37233981 |
T |
|
| Q |
144 |
caaagaaccaagaacatcctcaagtttaaagggcaaagcaggcaaaaaataaagaaacacaacatcaaaaggagaccatttttccggaacaatagtaacc |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37233982 |
caaagaaccaagaacatcctcaagtttaaagggcaaagcaggcaaaaaataaagaaacacaacatcaaaaggagaccatttttccggaacaatagtaacc |
37234081 |
T |
|
| Q |
244 |
tctccttgccaacacttaatattatcatatttctcaataagaagagccaatatcaaaagtgagtcatgaagaacaagcatagacttgaatttagaaccac |
343 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37234082 |
tctccttgccaacacttaatattatcatatttctcaataagaagagccaatatcaaaagtgagtcatgaagaacaagcatagacttgaatttagaaccac |
37234181 |
T |
|
| Q |
344 |
caactaaacaatccacaaactcttcagaaccacttgaaaccaaaacccttgaattctcatcaattttcccagatgatataatacggtcaatgtttggtcc |
443 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37234182 |
caactaaacaatccacaaactcttcagaaccacttgaaaccaaaacccttgaattctcatcaattttcccagatgatataatacggtcaatgtttggtcc |
37234281 |
T |
|
| Q |
444 |
tgtatagtcaagcactgaccaatctttgtcgatgaattcttcaacagcgacataagatgcgttttcttcagggattgaaactgggttgttgatatttgat |
543 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37234282 |
tgtatagtcaagcactgaccaatctttgtcgatgaattcttcaacagcgacataagatgcgttttcttcagggattgaaactgggttgttgatatttgat |
37234381 |
T |
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| Q |
544 |
gatg |
547 |
Q |
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|||| |
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| T |
37234382 |
gatg |
37234385 |
T |
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