View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6092_high_8 (Length: 276)

Name: NF6092_high_8
Description: NF6092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6092_high_8
NF6092_high_8
[»] scaffold2015 (1 HSPs)
scaffold2015 (21-181)||(444-604)
[»] chr3 (68 HSPs)
chr3 (21-181)||(14648275-14648435)
chr3 (1-124)||(45220947-45221070)
chr3 (2-124)||(2249202-2249324)
chr3 (1-121)||(5841140-5841260)
chr3 (4-73)||(41156-41225)
chr3 (2-73)||(16326027-16326098)
chr3 (2-73)||(10834926-10834998)
chr3 (2-73)||(16840189-16840260)
chr3 (12-73)||(11912449-11912510)
chr3 (16-73)||(12853363-12853420)
chr3 (16-73)||(14670048-14670105)
chr3 (16-73)||(16795525-16795582)
chr3 (64-119)||(16840344-16840399)
chr3 (129-180)||(18757206-18757257)
chr3 (16-73)||(4590160-4590217)
chr3 (16-73)||(8491732-8491789)
chr3 (67-120)||(11912309-11912362)
chr3 (16-73)||(13435840-13435897)
chr3 (67-120)||(51608665-51608718)
chr3 (129-181)||(8583509-8583561)
chr3 (129-181)||(13969076-13969128)
chr3 (129-181)||(13974551-13974603)
chr3 (129-181)||(14084441-14084493)
chr3 (129-181)||(14089842-14089894)
chr3 (129-173)||(20187584-20187628)
chr3 (129-181)||(49399383-49399435)
chr3 (26-73)||(3801992-3802039)
chr3 (129-180)||(11850905-11850956)
chr3 (26-73)||(12304196-12304243)
chr3 (26-73)||(14764805-14764852)
chr3 (18-73)||(17318511-17318566)
chr3 (26-73)||(18899475-18899522)
chr3 (26-73)||(20249859-20249906)
chr3 (130-181)||(24123405-24123456)
chr3 (26-73)||(54519619-54519666)
chr3 (131-181)||(31690814-31690864)
chr3 (131-181)||(31943351-31943401)
chr3 (20-73)||(8928871-8928924)
chr3 (16-73)||(16751901-16751958)
chr3 (16-69)||(18933355-18933408)
chr3 (16-69)||(30064411-30064464)
chr3 (129-181)||(10597976-10598028)
chr3 (26-73)||(9532280-9532327)
chr3 (34-73)||(14681572-14681611)
chr3 (26-73)||(29545948-29545995)
chr3 (130-164)||(10597950-10597984)
chr3 (26-72)||(38312867-38312913)
chr3 (16-73)||(5219869-5219926)
chr3 (16-73)||(11853728-11853785)
chr3 (32-73)||(15463900-15463941)
chr3 (32-73)||(23372559-23372600)
chr3 (32-73)||(51299555-51299596)
chr3 (129-180)||(12419275-12419326)
chr3 (16-71)||(14068062-14068117)
chr3 (34-73)||(19774220-19774259)
chr3 (16-67)||(37440680-37440731)
chr3 (31-73)||(11301680-11301722)
chr3 (31-73)||(14664447-14664489)
chr3 (31-73)||(14667611-14667653)
chr3 (31-73)||(23173319-23173361)
chr3 (16-69)||(7108264-7108317)
chr3 (16-69)||(7112199-7112252)
chr3 (16-69)||(11068639-11068692)
chr3 (16-69)||(14497973-14498026)
chr3 (16-69)||(22320155-22320208)
chr3 (16-69)||(22335210-22335263)
chr3 (16-69)||(55021402-55021455)
chr3 (92-124)||(16840460-16840492)
[»] chr6 (34 HSPs)
chr6 (21-181)||(14594666-14594826)
chr6 (26-181)||(7429341-7429496)
chr6 (2-124)||(9622899-9623020)
chr6 (1-121)||(28707833-28707953)
chr6 (4-73)||(23955391-23955460)
chr6 (131-181)||(23235146-23235196)
chr6 (7-73)||(34297763-34297829)
chr6 (67-120)||(1254037-1254090)
chr6 (16-73)||(18918580-18918637)
chr6 (16-69)||(23400704-23400757)
chr6 (16-73)||(23538003-23538060)
chr6 (129-181)||(24562192-24562244)
chr6 (26-73)||(12941243-12941290)
chr6 (2-73)||(25737914-25737985)
chr6 (26-73)||(27222854-27222901)
chr6 (31-73)||(1254181-1254223)
chr6 (16-73)||(2076308-2076365)
chr6 (67-120)||(34297916-34297969)
chr6 (129-180)||(5290384-5290435)
chr6 (64-119)||(25737775-25737830)
chr6 (129-180)||(26418909-26418960)
chr6 (26-73)||(28290904-28290951)
chr6 (32-73)||(4475817-4475858)
chr6 (16-73)||(16622857-16622914)
chr6 (16-73)||(27555561-27555618)
chr6 (16-73)||(31479462-31479519)
chr6 (16-71)||(18953483-18953538)
chr6 (31-73)||(22075405-22075447)
chr6 (31-73)||(27416542-27416584)
chr6 (131-164)||(5290359-5290392)
chr6 (16-69)||(8242438-8242491)
chr6 (16-69)||(11565427-11565480)
chr6 (16-69)||(11716940-11716993)
chr6 (16-69)||(12620333-12620386)
[»] chr5 (32 HSPs)
chr5 (21-181)||(43243764-43243924)
chr5 (1-121)||(19075863-19075983)
chr5 (1-124)||(31253195-31253318)
chr5 (4-73)||(33473919-33473988)
chr5 (131-181)||(27636094-27636144)
chr5 (16-73)||(15238117-15238174)
chr5 (16-73)||(22120591-22120648)
chr5 (131-180)||(24669209-24669258)
chr5 (131-180)||(24738978-24739027)
chr5 (131-180)||(24751747-24751796)
chr5 (129-181)||(20831688-20831740)
chr5 (26-73)||(19510484-19510531)
chr5 (26-73)||(28372091-28372138)
chr5 (2-73)||(36459570-36459641)
chr5 (26-73)||(37600018-37600065)
chr5 (16-73)||(10751839-10751896)
chr5 (67-120)||(36459430-36459483)
chr5 (26-73)||(22339034-22339081)
chr5 (26-73)||(22749183-22749230)
chr5 (26-73)||(38146428-38146475)
chr5 (26-73)||(41878661-41878708)
chr5 (16-73)||(18354819-18354876)
chr5 (16-73)||(20912252-20912309)
chr5 (16-57)||(22108449-22108490)
chr5 (26-73)||(22335504-22335551)
chr5 (26-73)||(23113412-23113459)
chr5 (16-69)||(19474172-19474225)
chr5 (16-69)||(20294540-20294593)
chr5 (16-73)||(24768562-24768619)
chr5 (129-181)||(1857718-1857770)
chr5 (21-57)||(9774978-9775014)
chr5 (129-181)||(21675686-21675738)
[»] chr1 (26 HSPs)
chr1 (1-124)||(11944965-11945088)
chr1 (1-124)||(43630977-43631100)
chr1 (21-138)||(20032180-20032297)
chr1 (2-124)||(11809935-11810065)
chr1 (16-73)||(22132098-22132155)
chr1 (5-49)||(636552-636596)
chr1 (129-181)||(23195691-23195743)
chr1 (2-73)||(29533909-29533981)
chr1 (16-73)||(21406275-21406332)
chr1 (16-73)||(41801278-41801335)
chr1 (129-181)||(21541966-21542018)
chr1 (129-181)||(42096118-42096170)
chr1 (26-73)||(16370947-16370994)
chr1 (16-69)||(20230138-20230191)
chr1 (16-73)||(39245170-39245227)
chr1 (16-73)||(39248725-39248782)
chr1 (16-73)||(41389664-41389721)
chr1 (32-73)||(32649089-32649130)
chr1 (16-73)||(33796055-33796112)
chr1 (16-69)||(1009288-1009341)
chr1 (16-69)||(1926795-1926848)
chr1 (16-69)||(16376815-16376868)
chr1 (16-69)||(20925809-20925862)
chr1 (129-178)||(24079437-24079486)
chr1 (131-172)||(24109243-24109284)
chr1 (16-69)||(52634294-52634347)
[»] chr8 (32 HSPs)
chr8 (2-124)||(44494209-44494331)
chr8 (2-124)||(21967978-21968108)
chr8 (2-124)||(21980818-21980948)
chr8 (2-124)||(21985801-21985931)
chr8 (2-124)||(22009182-22009312)
chr8 (21-124)||(11252087-11252190)
chr8 (2-103)||(22000764-22000873)
chr8 (4-73)||(11774318-11774387)
chr8 (2-124)||(34950057-34950179)
chr8 (4-73)||(8414964-8415033)
chr8 (2-73)||(21328588-21328659)
chr8 (129-181)||(3697555-3697607)
chr8 (129-181)||(23825007-23825059)
chr8 (16-73)||(21386181-21386238)
chr8 (16-73)||(23427848-23427905)
chr8 (16-73)||(23913287-23913344)
chr8 (67-120)||(42561025-42561078)
chr8 (2-73)||(42560867-42560938)
chr8 (16-69)||(44385833-44385886)
chr8 (130-170)||(23653773-23653813)
chr8 (129-181)||(30767164-30767216)
chr8 (16-73)||(14399092-14399149)
chr8 (16-69)||(21409927-21409980)
chr8 (16-69)||(21804419-21804472)
chr8 (31-72)||(27942700-27942741)
chr8 (131-172)||(31418910-31418951)
chr8 (129-169)||(5239975-5240015)
chr8 (16-69)||(21974183-21974236)
chr8 (129-162)||(23825053-23825086)
chr8 (16-69)||(43250228-43250281)
chr8 (16-68)||(21978293-21978345)
chr8 (131-159)||(31412728-31412756)
[»] chr4 (37 HSPs)
chr4 (1-124)||(37839176-37839299)
chr4 (2-124)||(42597906-42598028)
chr4 (4-73)||(28384873-28384942)
chr4 (16-73)||(631747-631804)
chr4 (16-73)||(13813832-13813889)
chr4 (16-73)||(13818320-13818377)
chr4 (16-73)||(22634926-22634983)
chr4 (16-73)||(24048384-24048441)
chr4 (129-181)||(13452110-13452162)
chr4 (16-73)||(10711847-10711904)
chr4 (16-73)||(10925617-10925674)
chr4 (16-73)||(12422965-12423022)
chr4 (16-73)||(17052445-17052502)
chr4 (16-73)||(27532774-27532831)
chr4 (26-73)||(15533241-15533288)
chr4 (26-73)||(36036974-36037021)
chr4 (26-73)||(49549092-49549139)
chr4 (16-66)||(23996966-23997016)
chr4 (31-73)||(30145805-30145847)
chr4 (16-73)||(15223568-15223625)
chr4 (129-178)||(37881282-37881331)
chr4 (26-73)||(18211626-18211673)
chr4 (129-162)||(13452156-13452189)
chr4 (16-73)||(20158447-20158504)
chr4 (16-73)||(20163898-20163955)
chr4 (16-69)||(4562773-4562826)
chr4 (16-69)||(5758455-5758508)
chr4 (16-69)||(9555095-9555148)
chr4 (16-69)||(12486297-12486350)
chr4 (16-69)||(14758991-14759044)
chr4 (16-69)||(14955759-14955812)
chr4 (16-69)||(17807080-17807133)
chr4 (16-73)||(20161123-20161180)
chr4 (16-69)||(25688468-25688521)
chr4 (16-69)||(33740862-33740915)
chr4 (5-73)||(38106968-38107037)
chr4 (130-170)||(10977225-10977265)
[»] chr7 (50 HSPs)
chr7 (1-121)||(11394863-11394983)
chr7 (2-124)||(16185487-16185617)
chr7 (4-73)||(41283667-41283736)
chr7 (16-89)||(18301357-18301430)
chr7 (16-73)||(10607320-10607377)
chr7 (16-73)||(11660304-11660361)
chr7 (16-73)||(13891652-13891709)
chr7 (16-73)||(13892035-13892092)
chr7 (16-73)||(20486764-20486821)
chr7 (16-73)||(39268313-39268370)
chr7 (129-181)||(32771378-32771430)
chr7 (2-73)||(15213070-15213141)
chr7 (16-73)||(7520215-7520272)
chr7 (16-73)||(9752507-9752564)
chr7 (16-73)||(25928371-25928428)
chr7 (129-181)||(4279873-4279925)
chr7 (129-181)||(19616205-19616257)
chr7 (26-73)||(146522-146569)
chr7 (26-73)||(14420809-14420856)
chr7 (26-73)||(16005026-16005073)
chr7 (26-73)||(18606360-18606407)
chr7 (26-73)||(18871319-18871366)
chr7 (31-73)||(838148-838190)
chr7 (31-73)||(1203328-1203370)
chr7 (31-73)||(16109990-16110032)
chr7 (16-73)||(16582443-16582500)
chr7 (16-73)||(18424257-18424314)
chr7 (131-176)||(18958672-18958717)
chr7 (16-69)||(26291183-26291236)
chr7 (16-69)||(39721222-39721275)
chr7 (129-173)||(26294977-26295021)
chr7 (26-73)||(10897906-10897953)
chr7 (129-172)||(37244549-37244592)
chr7 (131-181)||(15086165-15086215)
chr7 (32-73)||(1860037-1860078)
chr7 (16-73)||(2833481-2833538)
chr7 (32-73)||(13919428-13919469)
chr7 (16-69)||(15083252-15083305)
chr7 (67-120)||(15212930-15212983)
chr7 (133-173)||(16952481-16952521)
chr7 (130-162)||(32771424-32771456)
chr7 (31-73)||(834060-834102)
chr7 (31-73)||(1199240-1199282)
chr7 (16-69)||(31751-31804)
chr7 (132-173)||(3327717-3327758)
chr7 (16-69)||(12706122-12706175)
chr7 (16-69)||(12713566-12713619)
chr7 (16-69)||(12722224-12722277)
chr7 (16-69)||(16908509-16908562)
chr7 (16-69)||(18281984-18282037)
[»] scaffold0815 (1 HSPs)
scaffold0815 (1-104)||(1-104)
[»] scaffold0098 (2 HSPs)
scaffold0098 (21-124)||(34025-34128)
scaffold0098 (129-181)||(52853-52905)
[»] chr2 (23 HSPs)
chr2 (4-73)||(37379058-37379127)
chr2 (129-181)||(21133469-21133521)
chr2 (131-181)||(11465983-11466033)
chr2 (19-73)||(21074510-21074564)
chr2 (16-73)||(9784016-9784073)
chr2 (129-181)||(6744539-6744591)
chr2 (129-181)||(19649760-19649812)
chr2 (26-73)||(6481806-6481853)
chr2 (26-73)||(6485273-6485320)
chr2 (26-73)||(9240696-9240743)
chr2 (26-73)||(19663567-19663614)
chr2 (26-73)||(20260279-20260326)
chr2 (133-181)||(27367802-27367850)
chr2 (129-181)||(28971521-28971573)
chr2 (129-169)||(43693323-43693363)
chr2 (131-162)||(28971496-28971527)
chr2 (16-69)||(24630047-24630100)
chr2 (16-69)||(24645177-24645230)
chr2 (16-69)||(24647953-24648006)
chr2 (16-69)||(27380993-27381046)
chr2 (16-69)||(27384963-27385016)
chr2 (16-69)||(27600397-27600450)
chr2 (16-69)||(30346657-30346710)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-124)||(173211-173324)
[»] scaffold0679 (1 HSPs)
scaffold0679 (1-66)||(3250-3315)
[»] scaffold0293 (1 HSPs)
scaffold0293 (16-87)||(21339-21410)
[»] scaffold0001 (3 HSPs)
scaffold0001 (64-124)||(163708-163768)
scaffold0001 (37-73)||(163588-163624)
scaffold0001 (4-36)||(175425-175457)
[»] scaffold0599 (2 HSPs)
scaffold0599 (12-73)||(4143-4204)
scaffold0599 (67-120)||(4003-4056)
[»] scaffold0575 (1 HSPs)
scaffold0575 (16-73)||(6960-7017)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-73)||(37202-37259)
[»] scaffold0013 (1 HSPs)
scaffold0013 (16-73)||(74331-74388)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-73)||(25569-25624)
[»] scaffold0355 (1 HSPs)
scaffold0355 (131-181)||(1656-1706)
[»] scaffold0380 (1 HSPs)
scaffold0380 (16-73)||(3996-4053)
[»] scaffold0139 (1 HSPs)
scaffold0139 (16-73)||(23937-23994)
[»] scaffold0080 (2 HSPs)
scaffold0080 (16-73)||(28494-28551)
scaffold0080 (16-73)||(33959-34016)
[»] scaffold0029 (1 HSPs)
scaffold0029 (16-73)||(62839-62896)
[»] scaffold1584 (1 HSPs)
scaffold1584 (129-181)||(229-281)
[»] scaffold0106 (1 HSPs)
scaffold0106 (129-181)||(38311-38363)
[»] scaffold0076 (2 HSPs)
scaffold0076 (129-181)||(30360-30412)
scaffold0076 (129-181)||(35761-35813)
[»] scaffold0011 (1 HSPs)
scaffold0011 (129-181)||(174776-174828)
[»] scaffold1427 (1 HSPs)
scaffold1427 (26-73)||(222-269)
[»] scaffold0842 (1 HSPs)
scaffold0842 (26-73)||(5264-5311)
[»] scaffold0337 (1 HSPs)
scaffold0337 (26-73)||(10831-10878)
[»] scaffold0109 (1 HSPs)
scaffold0109 (16-71)||(37197-37252)
[»] scaffold0034 (2 HSPs)
scaffold0034 (129-180)||(10322-10373)
scaffold0034 (129-180)||(17618-17669)
[»] scaffold0026 (1 HSPs)
scaffold0026 (26-73)||(109623-109670)
[»] scaffold0012 (1 HSPs)
scaffold0012 (26-73)||(224152-224199)
[»] scaffold0348 (1 HSPs)
scaffold0348 (129-181)||(2828-2881)
[»] scaffold0326 (1 HSPs)
scaffold0326 (131-180)||(609-658)
[»] scaffold0188 (1 HSPs)
scaffold0188 (131-180)||(31791-31840)
[»] scaffold0142 (1 HSPs)
scaffold0142 (16-73)||(8739-8796)
[»] scaffold0104 (5 HSPs)
scaffold0104 (129-181)||(25947-25999)
scaffold0104 (129-162)||(25993-26026)
scaffold0104 (129-162)||(27375-27408)
scaffold0104 (130-162)||(26020-26052)
scaffold0104 (130-162)||(27402-27434)
[»] scaffold0028 (3 HSPs)
scaffold0028 (129-181)||(52599-52651)
scaffold0028 (16-69)||(60325-60378)
scaffold0028 (129-181)||(47194-47245)
[»] scaffold0327 (1 HSPs)
scaffold0327 (26-73)||(18845-18892)
[»] scaffold0120 (1 HSPs)
scaffold0120 (130-181)||(5346-5397)
[»] scaffold0544 (1 HSPs)
scaffold0544 (32-73)||(3532-3573)
[»] scaffold0410 (1 HSPs)
scaffold0410 (16-73)||(14866-14923)
[»] scaffold0486 (1 HSPs)
scaffold0486 (16-72)||(8600-8656)
[»] scaffold1852 (1 HSPs)
scaffold1852 (31-73)||(835-877)
[»] scaffold0200 (1 HSPs)
scaffold0200 (35-73)||(10789-10827)
[»] scaffold0023 (1 HSPs)
scaffold0023 (31-73)||(11799-11841)
[»] scaffold0003 (1 HSPs)
scaffold0003 (31-73)||(70777-70819)
[»] scaffold0372 (1 HSPs)
scaffold0372 (16-69)||(6320-6373)
[»] scaffold0349 (1 HSPs)
scaffold0349 (16-69)||(11077-11130)
[»] scaffold0299 (1 HSPs)
scaffold0299 (32-73)||(5847-5888)
[»] scaffold0166 (1 HSPs)
scaffold0166 (16-73)||(11059-11116)
[»] scaffold0157 (1 HSPs)
scaffold0157 (16-69)||(34127-34180)
[»] scaffold0420 (1 HSPs)
scaffold0420 (129-181)||(9912-9964)


Alignment Details
Target: scaffold2015 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 444 - 604
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  444 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 543  T
Q  121 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  544 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccata 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 14648275 - 14648435
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14648275 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14648374  T
Q  121 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14648375 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccata 14648435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 45220947 - 45221070
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  45220947 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactacggggat 45221046  T
Q  101 gttaagaagaaatattattgagtg 124  Q
    |||||| |||| ||||||||||||    
T  45221047 gttaaggagaattattattgagtg 45221070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 2249202 - 2249324
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  2249202 gaggttgttatgatattacatgatgttacctatgagttattaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatg 2249301  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    ||||||||||  |||||||||||    
T  2249302 ttaagaagaagaattattgagtg 2249324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5841260 - 5841140
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| | ||    
T  5841260 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaat 5841161  T
Q  101 gttaagaagaaatattattga 121  Q
    |||||| |||| |||||||||    
T  5841160 gttaaggagaattattattga 5841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 41225 - 41156
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41225 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 16326027 - 16326098
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  16326027 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgtcaagttg 16326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 10834926 - 10834998
Alignment:
Q  2 gaggttgttatgat-attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10834926 gaggttgttatgatgattacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 16840189 - 16840260
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  16840189 gaggttgttatgatgttacatgattttatctatgagttgttaaatgtatttgatgatggttatgttaagttg 16840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 11912510 - 11912449
Alignment:
Q  12 tgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11912510 tgatgttacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 12853363 - 12853420
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12853363 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 14670105 - 14670048
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14670105 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14670048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16795582 - 16795525
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16795582 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 16840344 - 16840399
Alignment:
Q  64 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattatt 119  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  16840344 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattatt 16840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 18757206 - 18757257
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  18757206 cggtgttgtcatgtcatttgcatgagtcggtattgttggttgtaaatgccat 18757257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 4590160 - 4590217
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4590160 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 4590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8491732 - 8491789
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  8491732 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 8491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 11912362 - 11912309
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  11912362 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 11912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 13435897 - 13435840
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  13435897 attacatgatgttatatatgagttgttaaatgtacttgatgatggttatgttaagttg 13435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 51608665 - 51608718
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  51608665 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 51608718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 8583509 - 8583561
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  8583509 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 8583561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 13969076 - 13969128
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  13969076 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 13969128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 13974551 - 13974603
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  13974551 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 13974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 14084493 - 14084441
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  14084493 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 14084441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 14089894 - 14089842
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  14089894 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 14089842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 20187628 - 20187584
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaa 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  20187628 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaa 20187584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 49399435 - 49399383
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  49399435 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 49399383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 3802039 - 3801992
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3802039 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 3801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 11850905 - 11850956
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  11850905 cggtgttgtcatgtcatttgcatgagtcagtgttgttggttgtaattgccat 11850956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 12304243 - 12304196
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12304243 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 14764805 - 14764852
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14764805 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 17318511 - 17318566
Alignment:
Q  18 tacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  17318511 tacatgaagttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 17318566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18899522 - 18899475
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18899522 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 20249859 - 20249906
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20249859 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 24123405 - 24123456
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  24123405 ggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 24123456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 54519666 - 54519619
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  54519666 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 54519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 31690814 - 31690864
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  31690814 gtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccata 31690864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 31943401 - 31943351
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  31943401 gtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccata 31943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 8928871 - 8928924
Alignment:
Q  20 catgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  8928871 catgatgttatctatgagttgttaaatgtacttgatggtggttatgttaagttg 8928924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16751901 - 16751958
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  16751901 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 16751958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 18933355 - 18933408
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  18933355 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 18933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30064464 - 30064411
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  30064464 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 30064411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 10597976 - 10598028
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||| |||||||||||||||||||||||||  |||||||||| |||||||    
T  10597976 cggtgttatcatgtcatttgcatgagtcggtgtcgttggttgtaattgccata 10598028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 9532327 - 9532280
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  9532327 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 9532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 14681611 - 14681572
Alignment:
Q  34 tgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  14681611 tgagttgttaaatgtacttgatgatggttatgttaagttg 14681572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 29545948 - 29545995
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  29545948 gttatctatgagttgttaaatgtacttgatgatggttgtgttaagttg 29545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 10597950 - 10597984
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgttat 164  Q
    |||||||||||||||||||||||||||||||||||    
T  10597950 ggtgttgtcatgtcatttgcatgagtcggtgttat 10597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 38312867 - 38312913
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt 72  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  38312867 gttatctatgagtggttaaatgtacttgatgatggttatgttaagtt 38312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 5219926 - 5219869
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  5219926 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 5219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11853785 - 11853728
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  11853785 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 15463941 - 15463900
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  15463941 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 15463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 23372559 - 23372600
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  23372559 tatgagttgttaaatgtacttgatgattgttatgttaagttg 23372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 51299596 - 51299555
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  51299596 tatgagttgttaaatgtacttgatgattgttatgttaagttg 51299555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 12419326 - 12419275
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    ||||||| |||||||||||||||||||||||||| || ||| ||| ||||||    
T  12419326 cggtgttttcatgtcatttgcatgagtcggtgttgttagttataattgccat 12419275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 14068062 - 14068117
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 71  Q
    ||||||||| |||| ||| |||||| |||||||| ||||||| |||||||||||||    
T  14068062 attacatgatgttatctaggagttgctaaatgtatttgatgatggttatgttaagt 14068117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 19774259 - 19774220
Alignment:
Q  34 tgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  19774259 tgagttgttaaatgtacttgatgatgtttatgttaagttg 19774220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 37440680 - 37440731
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgtt 67  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||    
T  37440680 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgtt 37440731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 11301680 - 11301722
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  11301680 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11301722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 14664489 - 14664447
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  14664489 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14664447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 14667653 - 14667611
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  14667653 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 23173361 - 23173319
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  23173361 ctatgagttgttaaatatacttgatgatagttatgttaagttg 23173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7108317 - 7108264
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  7108317 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 7108264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7112252 - 7112199
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  7112252 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 7112199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 11068692 - 11068639
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11068692 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11068639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 14498026 - 14497973
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14498026 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14497973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 22320208 - 22320155
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  22320208 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 22320155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 22335263 - 22335210
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  22335263 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 22335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 55021455 - 55021402
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  55021455 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 55021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 16840460 - 16840492
Alignment:
Q  92 taaggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||||| ||||||||||||    
T  16840460 taaggggatgttaagaagaattattattgagtg 16840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 14594666 - 14594826
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14594666 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14594765  T
Q  121 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  14594766 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgtttgttgtaaatgccata 14594826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 7429496 - 7429341
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattgagtgc 125  Q
    |||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7429496 gttacctatgagttgttaaatgtactcgaggggggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtgc 7429397  T
Q  126 atacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7429396 atacagtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgtcata 7429341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 9622899 - 9623020
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  9622899 gaggttgttatgatattacatgatgttacctatgagttgttaa-tgtacttgatgagggttatgtaaagttgtcttctattcatgagcactaaggggatg 9622997  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    |||||||||| ||||||||||||    
T  9622998 ttaagaagaattattattgagtg 9623020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28707953 - 28707833
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| | ||    
T  28707953 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaat 28707854  T
Q  101 gttaagaagaaatattattga 121  Q
    |||||| |||| |||||||||    
T  28707853 gttaaggagaattattattga 28707833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 23955460 - 23955391
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23955460 ggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 23955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 23235146 - 23235196
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  23235146 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccata 23235196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 34297763 - 34297829
Alignment:
Q  7 tgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  34297763 tgttttgatgttacatgatgttatctatgagttgttaaatgtacttgctgatggttatgttaagttg 34297829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 1254090 - 1254037
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  1254090 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 1254037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 18918580 - 18918637
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18918580 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 18918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 23400757 - 23400704
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  23400757 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaa 23400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23538060 - 23538003
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||    
T  23538060 attacatgatgttgtctatgagttgttaaatgtacttgatgatggttatgttaagttg 23538003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 24562244 - 24562192
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  24562244 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 24562192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 12941290 - 12941243
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12941290 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 25737985 - 25737914
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||| ||||||| |||||||| |||| |||||||||| |||||||||||||||| | ||||| |||||||    
T  25737985 gaggtttttatgatgttacatgatgttatctatgagttggtaaatgtacttgatgatgattatgctaagttg 25737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 27222901 - 27222854
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27222901 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 27222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 1254223 - 1254181
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1254223 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 2076365 - 2076308
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  2076365 attacatgatgttatctatgagttgttaaatgtatttgatgatgattatgttaagttg 2076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 34297916 - 34297969
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| ||||||||    
T  34297916 taagttgtcttctattcatgagtactaaggcgatgttaagaagaattattattg 34297969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 5290384 - 5290435
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  5290384 cggtgttatcatgtcatttgcatgagtcagtgttgttggttgtaattgccat 5290435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 25737830 - 25737775
Alignment:
Q  64 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattatt 119  Q
    |||||||||||||||||||||||||   ||||||||||||| |||||| |||||||    
T  25737830 tgttaagttgtcttctattcatgagggctaaggggatgttatgaagaattattatt 25737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 26418909 - 26418960
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  26418909 cggtgttgtcatgtcatttgcatgagttggtgttgttggttataattgccat 26418960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 28290904 - 28290951
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  28290904 gttatctataagttgttaaatgtacttgatgatggttatgttaagttg 28290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 4475858 - 4475817
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  4475858 tatgagttgttaaatgtacttgatgattgttatgttaagttg 4475817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16622914 - 16622857
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| |||||| |||||||||||||||||||| | |||||||||||||    
T  16622914 attacatgatattatctatgaattgttaaatgtacttgatgatgtttatgttaagttg 16622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27555618 - 27555561
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  27555618 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27555561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 31479462 - 31479519
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  31479462 attacatgatattatctatgagttgttaaatgtatttgatgatgtttatgttaagttg 31479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 18953483 - 18953538
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 71  Q
    ||||||||| || | ||| ||||||||||||||||||||||| | |||||||||||    
T  18953483 attacatgatgtcatctaggagttgttaaatgtacttgatgatgattatgttaagt 18953538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 22075405 - 22075447
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  22075405 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 22075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 27416542 - 27416584
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  27416542 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27416584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 5290359 - 5290392
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttat 164  Q
    |||||||||||||| |||||||||||||||||||    
T  5290359 gtgttgtcatgtcagttgcatgagtcggtgttat 5290392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 8242491 - 8242438
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  8242491 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 8242438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 11565480 - 11565427
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11565480 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11565427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 11716940 - 11716993
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11716940 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11716993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 12620333 - 12620386
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12620333 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12620386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 8e-67; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 43243764 - 43243924
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  43243764 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatta 43243863  T
Q  121 agtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43243864 agtgcatacggtgttgtcatgtcatttgcatgagtcgatgttgttggttgtaaatgccata 43243924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19075983 - 19075863
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  19075983 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggat 19075884  T
Q  101 gttaagaagaaatattattga 121  Q
    |||||| |||| |||||||||    
T  19075883 gttaaggagaattattattga 19075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31253195 - 31253318
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  31253195 cgaggttgttatgatattacatgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggat 31253294  T
Q  101 gttaagaagaaatattattgagtg 124  Q
    |||||| |||| ||| ||||||||    
T  31253295 gttaaggagaattatcattgagtg 31253318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 33473919 - 33473988
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  33473919 ggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 33473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 27636094 - 27636144
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  27636094 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccata 27636144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 15238117 - 15238174
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  15238117 attacatgatgttatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22120591 - 22120648
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22120591 attatatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 24669209 - 24669258
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24669209 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat 24669258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 24738978 - 24739027
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24738978 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat 24739027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 24751747 - 24751796
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24751747 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat 24751796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 20831740 - 20831688
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  20831740 cggtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccata 20831688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 19510531 - 19510484
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19510531 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 28372091 - 28372138
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28372091 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 28372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 36459641 - 36459570
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||| |||||||| |||| |||||||||||||||||||||| |||| | |||||||||||||    
T  36459641 gaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacttaatgatgattatgttaagttg 36459570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 37600018 - 37600065
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37600018 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37600065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10751896 - 10751839
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  10751896 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 10751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 36459483 - 36459430
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | ||||||||||||||||| || ||||||||    
T  36459483 taagttgtcttctattcatgagtactaaggggatgttaagaaaaattattattg 36459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 22339081 - 22339034
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  22339081 gttatctatgagttgttaaatgtacttgatgatggttatgttacgttg 22339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 22749230 - 22749183
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  22749230 gttatctatgagtggttaaatgtacttgatgatggttatgttaagttg 22749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 38146428 - 38146475
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  38146428 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 38146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 41878661 - 41878708
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  41878661 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 41878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 18354876 - 18354819
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  18354876 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 18354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 20912252 - 20912309
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |  ||||||||||||    
T  20912252 attacatgatgttatctatgagttgttaagtgtacttgatgatgtgtatgttaagttg 20912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 22108449 - 22108490
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatga 57  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  22108449 attacatgatgttatctatgagttgttaaatgtacttgatga 22108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 22335551 - 22335504
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| ||||    
T  22335551 gttatctatgagttgttaaatgtatttgatgatggttatgttacgttg 22335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 23113412 - 23113459
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| | || ||||||||||    
T  23113412 gttatctatgagttgttaaatgtacttgatgatgattgtgttaagttg 23113459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 19474172 - 19474225
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  19474172 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 19474225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 20294593 - 20294540
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  20294593 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 20294540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 24768562 - 24768619
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| ||||| |||||| | |||||||||||||    
T  24768562 attacatgatgatatctatgagttgttaagtgtacctgatgatgtttatgttaagttg 24768619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 1857718 - 1857770
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||| |||||| | |||||||||||||||||| |||||||||  |||||||    
T  1857718 cggtgtggtcatgacctttgcatgagtcggtgttgttggttgtagttgccata 1857770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 9775014 - 9774978
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatga 57  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9775014 atgatgttatctatgagttgttaaatgtacttgatga 9774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 21675686 - 21675738
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||| |||||| | |||||||||||||||||| |||||||||  |||||||    
T  21675686 cggtgtggtcatgacctttgcatgagtcggtgttgttggttgtagttgccata 21675738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 7e-52; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 11945088 - 11944965
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11945088 cgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggat 11944989  T
Q  101 gttaagaagaaatattattgagtg 124  Q
    |||||| |||| ||||||||||||    
T  11944988 gttaaggagaattattattgagtg 11944965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 43630977 - 43631100
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  43630977 cgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggat 43631076  T
Q  101 gttaagaagaaatattattgagtg 124  Q
    |||||| |||| ||||||||||||    
T  43631077 gttaaggagaattattattgagtg 43631100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 20032180 - 20032297
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20032180 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 20032279  T
Q  121 agtgcatacggtgttgtc 138  Q
    |||||||| |||| ||||    
T  20032280 agtgcatatggtgatgtc 20032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 11809935 - 11810065
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt--------gtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||        |||||||||||| ||||||||    
T  11809935 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcacgagcatta 11810034  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| || |||||||||    
T  11810035 aggggatgttaagaagaattaatattgagtg 11810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22132098 - 22132155
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22132098 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22132155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 636552 - 636596
Alignment:
Q  5 gttgttatgatattacatgaggttacctatgagttgttaaatgta 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  636552 gttgttatgatattacatgaggttacctatgagttgttaaatgta 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 23195691 - 23195743
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23195691 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgacata 23195743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 29533981 - 29533909
Alignment:
Q  2 gaggttgttatgatattacatgaggttac-ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||  ||||||| |||||||||||||||    
T  29533981 gaggttgttatgatattacatgatgttaagctatgagttgttaaatgtgtttgatgatggttatgttaagttg 29533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 21406332 - 21406275
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21406332 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41801278 - 41801335
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  41801278 attacatgatattatctatgagttgttaaatgtacttgatgatggttatgttaagttg 41801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21542018 - 21541966
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  21542018 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 21541966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 42096118 - 42096170
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  42096118 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 42096170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 16370994 - 16370947
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16370994 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 20230138 - 20230191
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  20230138 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 20230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 39245170 - 39245227
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  39245170 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39245227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 39248725 - 39248782
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  39248725 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41389664 - 41389721
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  41389664 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 41389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 32649130 - 32649089
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  32649130 tatgagttgttaaatgtacttgatgattgttatgttaagttg 32649089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 33796112 - 33796055
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  33796112 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 33796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 1009341 - 1009288
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  1009341 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 1009288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 1926795 - 1926848
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  1926795 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 1926848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 16376815 - 16376868
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  16376815 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 16376868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 20925809 - 20925862
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  20925809 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 20925862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 24079486 - 24079437
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 178  Q
    |||||| ||||||||||||| ||||||||||||| ||| |||||| ||||    
T  24079486 cggtgtagtcatgtcatttgtatgagtcggtgttgttgtttgtaattgcc 24079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 24109243 - 24109284
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgta 172  Q
    |||||||||||||| |||||||||||||| || |||||||||    
T  24109243 gtgttgtcatgtcagttgcatgagtcggtcttgttggttgta 24109284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 52634347 - 52634294
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  52634347 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 52634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 44494209 - 44494331
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  44494209 gaggttgttatgatattacatgatgttacctatgaattgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagcactaaggggatg 44494308  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    ||||||| || ||||||||||||    
T  44494309 ttaagaataattattattgagtg 44494331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 21967978 - 21968108
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||| ||    
T  21967978 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcacta 21968077  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| ||||||||||||    
T  21968078 aggggatgttaagaagaattattattgagtg 21968108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 21980818 - 21980948
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||| ||    
T  21980818 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcacta 21980917  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| ||||||||||||    
T  21980918 aggggatgttaagaagaattattattgagtg 21980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 21985801 - 21985931
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||| ||    
T  21985801 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcacta 21985900  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| ||||||||||||    
T  21985901 aggggatgttaagaagaattattattgagtg 21985931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 22009182 - 22009312
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||        |||||||| ||||||||||||||| ||    
T  22009182 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctattcatgagcacta 22009281  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| ||||||| ||||    
T  22009282 aggggatgttaagaagaattattattaagtg 22009312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 11252087 - 11252190
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctatt-catgagcattaaggggatgttaagaagaaatattatt 119  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  11252087 atgatgttacctatgagttgttaaatgtacttgatga-ggttatgttaagttgtcttctatttcatgagcactaaggggatgttaagaagaattattatt 11252185  T
Q  120 gagtg 124  Q
    |||||    
T  11252186 gagtg 11252190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 22000764 - 22000873
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt--------taagttgtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||| ||    
T  22000764 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcacta 22000863  T
Q  94 aggggatgtt 103  Q
    ||||||||||    
T  22000864 aggggatgtt 22000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 11774387 - 11774318
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  11774387 ggttgttatgatattacatgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 11774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 34950179 - 34950057
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||   || | |||  || | || | |||||||||| ||| ||||||    
T  34950179 gaggttgttctgatattacatgatgttacctatgagttgttaaatgtacttgatgagtttttttttattttttttttttttcatgagcactaatgggatg 34950080  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    |||||||||| ||||||||||||    
T  34950079 ttaagaagaattattattgagtg 34950057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 8414964 - 8415033
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  8414964 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgattagggttattttaagttg 8415033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21328659 - 21328588
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  21328659 gaggttgttatgatgttacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21328588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 3697607 - 3697555
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3697607 cggtgttgtaatgtcatttgcatgagtcggtgttgttggttgtaaatgccata 3697555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 23825059 - 23825007
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23825059 cggtgttgtcatgtcatttgcatgagttggtgttgttggttgtaaatgccata 23825007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 21386238 - 21386181
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21386238 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21386181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23427905 - 23427848
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||    
T  23427905 attacatgatgttatctatgagttgttaaatgtacttaatgatggttatgttaagttg 23427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23913344 - 23913287
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  23913344 attacatgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 23913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 42561025 - 42561078
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  42561025 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 42561078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 42560867 - 42560938
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||| |||||||| |||| |||||||||||||||||||| |||||  |||||||||||||||    
T  42560867 gaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacgtgatggtggttatgttaagttg 42560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 44385833 - 44385886
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||    
T  44385833 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaa 44385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 23653813 - 23653773
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgttattggttg 170  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  23653813 ggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 23653773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 30767164 - 30767216
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||| |||||||||||||||||||||||| |||||||||  |||||||    
T  30767164 cggtgttgttatgtcatttgcatgagtcggtgttgttggttgtagttgccata 30767216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14399092 - 14399149
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  14399092 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21409980 - 21409927
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  21409980 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21804472 - 21804419
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  21804472 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 27942700 - 27942741
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagtt 72  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  27942700 ctatgagttgttaaatgtacttgatgatggttatgataagtt 27942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 31418910 - 31418951
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgta 172  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  31418910 gtgttgtcatgtcatttgcatgagtcggtcttgttggttgta 31418951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 5240015 - 5239975
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggtt 169  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  5240015 cggtgttgtcatgtcatttgcatgagtcggttttgttggtt 5239975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 21974183 - 21974236
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  21974183 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 21974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 23825086 - 23825053
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    ||||||||||||||| ||||||||||||||||||    
T  23825086 cggtgttgtcatgtcgtttgcatgagtcggtgtt 23825053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 43250281 - 43250228
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  43250281 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 43250228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 21978293 - 21978345
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgtta 68  Q
    ||||||||| | || |||||||||||||| |||||||||||| | ||||||||    
T  21978293 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgtta 21978345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 31412728 - 31412756
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggt 159  Q
    |||||||||||||||||||||||||||||    
T  31412728 gtgttgtcatgtcatttgcatgagtcggt 31412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 4e-47; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 37839176 - 37839299
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  37839176 cgaggttgttatgatattacacgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggat 37839275  T
Q  101 gttaagaagaaatattattgagtg 124  Q
    |||||| |||| ||||||||||||    
T  37839276 gttaaggagaattattattgagtg 37839299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 42597906 - 42598028
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  42597906 gaggttgttatgatattacaagaggttacctaaaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatg 42598005  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    ||||| |||| ||||||||||||    
T  42598006 ttaaggagaattattattgagtg 42598028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 28384942 - 28384873
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28384942 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 28384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 631747 - 631804
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  631747 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 13813832 - 13813889
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13813832 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 13818320 - 13818377
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13818320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22634926 - 22634983
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  22634926 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 24048384 - 24048441
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  24048384 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 24048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 13452162 - 13452110
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13452162 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccata 13452110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10711904 - 10711847
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10711904 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10925674 - 10925617
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10925674 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 12423022 - 12422965
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  12423022 attacatgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 12422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17052445 - 17052502
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  17052445 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 17052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27532831 - 27532774
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27532831 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 15533288 - 15533241
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15533288 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 15533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 36037021 - 36036974
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36037021 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 36036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 49549092 - 49549139
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  49549092 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 49549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 23996966 - 23997016
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt 66  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  23996966 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgt 23997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 30145847 - 30145805
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  30145847 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 30145805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 15223625 - 15223568
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  15223625 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 37881331 - 37881282
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 178  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  37881331 cggtgtagtcatgtcatttgcatgagtcggtgttgttggttgtaattgcc 37881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18211673 - 18211626
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  18211673 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 18211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 13452189 - 13452156
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    ||||||||||||||||||||||||||||||||||    
T  13452189 cggtgttgtcatgtcatttgcatgagtcggtgtt 13452156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 20158447 - 20158504
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  20158447 attacatgatgatatctatgagttgttaagtgtacttgatgatgcttatgttaagttg 20158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 20163898 - 20163955
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  20163898 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 20163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 4562773 - 4562826
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  4562773 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 4562826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 5758455 - 5758508
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  5758455 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 5758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 9555148 - 9555095
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  9555148 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 9555095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12486350 - 12486297
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12486350 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12486297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 14758991 - 14759044
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14758991 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14759044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 14955759 - 14955812
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  14955759 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 14955812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 17807133 - 17807080
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  17807133 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 17807080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 20161123 - 20161180
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||| | | |||||||||||||    
T  20161123 attacatgatgatatctatgagttgttaagtgtacttgataatgtttatgttaagttg 20161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 25688521 - 25688468
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  25688521 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 25688468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33740915 - 33740862
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  33740915 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 33740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 38107037 - 38106968
Alignment:
Q  5 gttgttatgat-attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||| ||||||||| |||  |||||||||||||||| |  ||||||| | |||||||||||||    
T  38107037 gttgttatgatgattacatgatgttgtctatgagttgttaaatatgattgatgatgtttatgttaagttg 38106968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 10977225 - 10977265
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgttattggttg 170  Q
    |||||||||||||||||||||||||||| | || |||||||    
T  10977225 ggtgttgtcatgtcatttgcatgagtcgttattgttggttg 10977265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11394863 - 11394983
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| | ||    
T  11394863 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaat 11394962  T
Q  101 gttaagaagaaatattattga 121  Q
    |||||| |||| |||||||||    
T  11394963 gttaaggagaattattattga 11394983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 16185617 - 16185487
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt--------gtcttctattcatgagcatta 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||        |||||||||||||||||| ||    
T  16185617 gaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcatgagcacta 16185518  T
Q  94 aggggatgttaagaagaaatattattgagtg 124  Q
    |||||||||||||||||| || |||||||||    
T  16185517 aggggatgttaagaagaattaatattgagtg 16185487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 41283736 - 41283667
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41283736 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 18301430 - 18301357
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagc 89  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18301430 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagc 18301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 10607320 - 10607377
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10607320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10607377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11660361 - 11660304
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11660361 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 13891709 - 13891652
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13891709 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 13892092 - 13892035
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13892092 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13892035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20486821 - 20486764
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20486821 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 39268313 - 39268370
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  39268313 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 39268370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 32771430 - 32771378
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  32771430 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccata 32771378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 15213141 - 15213070
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||| |||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||    
T  15213141 gaggctgttttgatgttacatgatgttatccatgagttgttaaatgtacttgatgatggttatgttaagttg 15213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 7520215 - 7520272
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  7520215 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 7520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 9752507 - 9752564
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  9752507 attacatgatgttatctatgagttgttaaatgtacttggtgatggttatgttaagttg 9752564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 25928371 - 25928428
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||    
T  25928371 attacatgatgttatctatgagttgttaaatgtactttatgatggttatgttaagttg 25928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 4279925 - 4279873
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  4279925 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 4279873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 19616257 - 19616205
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  19616257 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 19616205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 146569 - 146522
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  146569 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 14420856 - 14420809
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14420856 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 16005073 - 16005026
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16005073 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18606407 - 18606360
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18606407 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18871366 - 18871319
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18871366 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18871319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 838148 - 838190
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  838148 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 1203328 - 1203370
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1203328 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 16109990 - 16110032
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  16109990 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 16110032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16582500 - 16582443
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| ||||  |||||||||||||||||||||||||| ||||||| |||||||    
T  16582500 attacatgatgttatttatgagttgttaaatgtacttgatgatggttatgataagttg 16582443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 18424314 - 18424257
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  18424314 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 18424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 18958672 - 18958717
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatg 176  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  18958672 gtgttgtcatgtcatttgcatgagtcggtattgttggttgtaaatg 18958717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26291236 - 26291183
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||    
T  26291236 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 26291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 39721275 - 39721222
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || ||||||||||||||||||||||||||| |||||||||||    
T  39721275 attacatgatgatatctatgagttgttaaatgtacttgatgatggttatgttaa 39721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 26294977 - 26295021
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaa 173  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  26294977 cggtgtagtcatgtcatttgcatgagtcggtgttgttggttgtaa 26295021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 10897906 - 10897953
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  10897906 gttatctatgagtcgttaaatgtacttgatgatggttatgttaagttg 10897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 37244549 - 37244592
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgta 172  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  37244549 cggtgttgtcatgtcatttgcatgagtcggtcttgttggttgta 37244592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 15086165 - 15086215
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||| ||||||||||||||||||||||||||| |||||||| | |||||||    
T  15086165 gtgtggtcatgtcatttgcatgagtcggtgttgttggttgtgattgccata 15086215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 1860037 - 1860078
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  1860037 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 1860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2833481 - 2833538
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  2833481 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 2833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 13919428 - 13919469
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  13919428 tatgagttgttaaatgtacttgatgacgtttatgttaagttg 13919469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 15083305 - 15083252
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| |||||||||||    
T  15083305 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 15083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 15212983 - 15212930
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    ||||||||| || ||||||||| | |||||||||||||||||||| ||||||||    
T  15212983 taagttgtcctcaattcatgagtactaaggggatgttaagaagaattattattg 15212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 16952481 - 16952521
Alignment:
Q  133 gttgtcatgtcatttgcatgagtcggtgttattggttgtaa 173  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  16952481 gttgtcgtgtcatttgcatgagtcggtgttgttggttgtaa 16952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 32771456 - 32771424
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    |||||||||||||||||||||||||||||||||    
T  32771456 ggtgttgtcatgtcatttgcatgagtcggtgtt 32771424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 834060 - 834102
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| | |||||||||| |||||||||||||||    
T  834060 ctatgagttgttaattctacttgatgatggttatgttaagttg 834102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 1199240 - 1199282
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| | |||||||||| |||||||||||||||    
T  1199240 ctatgagttgttaattctacttgatgatggttatgttaagttg 1199282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 31804 - 31751
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  31804 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 31751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 3327758 - 3327717
Alignment:
Q  132 tgttgtcatgtcatttgcatgagtcggtgttattggttgtaa 173  Q
    ||||| ||||||||||||||||||||||||| | ||||||||    
T  3327758 tgttgccatgtcatttgcatgagtcggtgttgtcggttgtaa 3327717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 12706122 - 12706175
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12706122 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12706175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12713619 - 12713566
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12713619 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12713566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12722277 - 12722224
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  12722277 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 12722224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 16908509 - 16908562
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  16908509 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 16908562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 18282037 - 18281984
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  18282037 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 18281984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 104 - 1
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||    
T  104 cgaggttgttatgatattacatgaggttacctttgagttgttaaatgtacttgatgagggttatgttaagctgtcttctattcatgagcactaaggagat 5  T
Q  101 gtta 104  Q
    ||||    
T  4 gtta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 34128 - 34025
Alignment:
Q  21 atgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||| |||||||||||||||||||||||||| || ||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  34128 atgatgttacctatgagttgttaaatgtactcgaggagtgttatgttaggttgtctgctattcatgagcattaaggggatgttaagaagaattattattg 34029  T
Q  121 agtg 124  Q
    ||||    
T  34028 agtg 34025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 52853 - 52905
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  52853 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccata 52905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 37379127 - 37379058
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37379127 ggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 37379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 21133469 - 21133521
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21133469 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccata 21133521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 11466033 - 11465983
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11466033 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccata 11465983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21074510 - 21074564
Alignment:
Q  19 acatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  21074510 acatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9784073 - 9784016
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||||    
T  9784073 attacatgatgttatctatgagttgtttaatgtacttgatgatggttatgttaagttg 9784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 6744539 - 6744591
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  6744539 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 6744591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 19649760 - 19649812
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  19649760 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccata 19649812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 6481853 - 6481806
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6481853 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 6485320 - 6485273
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6485320 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 9240743 - 9240696
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  9240743 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 9240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 19663567 - 19663614
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19663567 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 20260326 - 20260279
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20260326 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20260279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 27367802 - 27367850
Alignment:
Q  133 gttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||    
T  27367802 gttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 27367850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 28971521 - 28971573
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| |||||||    
T  28971521 cggtgttgtcatgtcattcacatgagtcggtgttgttggttgtaattgccata 28971573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 43693363 - 43693323
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggtt 169  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  43693363 cggtgttgtcatgtcatttgcatgagtcggtgttgttggtt 43693323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 28971496 - 28971527
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    ||||||||||||||||||||||||||||||||    
T  28971496 gtgttgtcatgtcatttgcatgagtcggtgtt 28971527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 24630047 - 24630100
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24630047 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24630100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24645230 - 24645177
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24645230 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24645177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24648006 - 24647953
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  24648006 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 24647953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 27380993 - 27381046
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27380993 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27381046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 27384963 - 27385016
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27384963 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27385016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27600450 - 27600397
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  27600450 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 27600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 30346657 - 30346710
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  30346657 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 30346710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 173211 - 173324
Alignment:
Q  2 gaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatgagcattaaggggatg 101  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||         || ||||||||| ||||||||||    
T  173211 gaggttgttatgatattatatgatgttacctattagttgttaaatgtacttgatgagggttatgttaa---------tactcatgagcactaaggggatg 173301  T
Q  102 ttaagaagaaatattattgagtg 124  Q
    |||||||||| ||||||||||||    
T  173302 ttaagaagaattattattgagtg 173324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3250 - 3315
Alignment:
Q  1 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3250 cgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgt 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 21339 - 21410
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttgtcttctattcatga 87  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  21339 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttgtcttttattcatga 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 163708 - 163768
Alignment:
Q  64 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattgagtg 124  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  163708 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgagtg 163768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 163588 - 163624
Alignment:
Q  37 gttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||| |||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttg 163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 175457 - 175425
Alignment:
Q  4 ggttgttatgatattacatgaggttacctatga 36  Q
    |||||||||||||||||||||||||||||||||    
T  175457 ggttgttatgatattacatgaggttacctatga 175425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 4204 - 4143
Alignment:
Q  12 tgatattacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  4204 tgatgttacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 4056 - 4003
Alignment:
Q  67 taagttgtcttctattcatgagcattaaggggatgttaagaagaaatattattg 120  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  4056 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 6960 - 7017
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6960 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 37202 - 37259
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37202 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37259  T

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Target: scaffold0013 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 74331 - 74388
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  74331 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 74388  T

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Target: scaffold0124 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 25569 - 25624
Alignment:
Q  18 tacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25569 tacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 25624  T

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Target: scaffold0355 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 1656 - 1706
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  1656 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgtcata 1706  T

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Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 4053 - 3996
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4053 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 3996  T

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Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 23937 - 23994
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  23937 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 23994  T

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Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 28551 - 28494
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  28551 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 28494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 34016 - 33959
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  34016 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 33959  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 62839 - 62896
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  62839 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 62896  T

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Target: scaffold1584 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 281 - 229
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  281 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccata 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 38363 - 38311
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  38363 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 38311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 30360 - 30412
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  30360 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 30412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 35761 - 35813
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  35761 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 35813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 174776 - 174828
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  174776 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccata 174828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 269 - 222
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  269 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 5311 - 5264
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5311 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 10831 - 10878
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10831 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 37197 - 37252
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagt 71  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||    
T  37197 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagt 37252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 10322 - 10373
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  10322 cggtgttgtcatgtcatttgcatgagtctgtgttgttggttgtaattgccat 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 17618 - 17669
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||| ||||||    
T  17618 cggtgttgttatgtcatttgcatgagtctgtgttgttggttgtaattgccat 17669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 109670 - 109623
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  109670 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 224152 - 224199
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  224152 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 224199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 2881 - 2828
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattgg-ttgtaaatgccata 181  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  2881 cggtgttgtcatgtcatttgcatgagtcggtgttgttggattgtaattgccata 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 609 - 658
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  609 gtgttgtcatgtcagttgcatgagtcggtgttgttggttgtaattgccat 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31791 - 31840
Alignment:
Q  131 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccat 180  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  31791 gtgttgtcatgtcagttgcatgagtcggtgttgttggttgtaattgccat 31840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8739 - 8796
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| |||| ||| |||||||||||||||| |||||| |||||||||||||||    
T  8739 attacatgatgttatctacgagttgttaaatgtacatgatgatggttatgttaagttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 25999 - 25947
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  25999 cggtgttgtcatgcaatttgcatgagtcggtgttgttggttgtaattgccata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 26026 - 25993
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    ||||||||||||||||||||||||||||||||||    
T  26026 cggtgttgtcatgtcatttgcatgagtcggtgtt 25993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 27408 - 27375
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    ||||||||||||||||||||||||||||||||||    
T  27408 cggtgttgtcatgtcatttgcatgagtcggtgtt 27375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 26052 - 26020
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    |||||||||||||||||||||||||||||||||    
T  26052 ggtgttgtcatgtcatttgcatgagtcggtgtt 26020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 27434 - 27402
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgtt 162  Q
    |||||||||||||||||||||||||||||||||    
T  27434 ggtgttgtcatgtcatttgcatgagtcggtgtt 27402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 52599 - 52651
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||| |||||||||||||||||| |||||||||  |||||||    
T  52599 cggtgttgtcatgtcctttgcatgagtcggtgttgttggttgtagttgccata 52651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 60325 - 60378
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  60325 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 60378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 47194 - 47245
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||||||||| || ||||||||||||||| |||||||||  |||||||    
T  47194 cggtgttgtcatgtcctt-gcatgagtcggtgttgttggttgtagttgccata 47245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18892 - 18845
Alignment:
Q  26 gttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  18892 gttatctataagttgttaaatgtacttgatgatggttatgttaagttg 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 5346 - 5397
Alignment:
Q  130 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    |||||||| |||||||||||||||||||||||| |||| ||||| |||||||    
T  5346 ggtgttgttatgtcatttgcatgagtcggtgttgttggatgtaattgccata 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 3532 - 3573
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  3532 tatgagttgttaaatgtacttgatgattgttatgttaagttg 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 14923 - 14866
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||||||    
T  14923 attacatgaagatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 8656 - 8600
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagtt 72  Q
    ||||||||| | || |||||||||||||| |||||||||||| | ||||||||||||    
T  8656 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagtt 8600  T

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Target: scaffold1852 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 835 - 877
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  835 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 877  T

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Target: scaffold0200 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 10827 - 10789
Alignment:
Q  35 gagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  10827 gagttgttaagtgtacttgatgatggttatgttaagttg 10789  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 11841 - 11799
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  11841 ctatgagttgttaagtgtacttgatgatgcttatgttaagttg 11799  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 70819 - 70777
Alignment:
Q  31 ctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  70819 ctatgagttgttaagtgtacttgatgatgtttatgttaagttg 70777  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 6320 - 6373
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  6320 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 6373  T

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Target: scaffold0349 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 11130 - 11077
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  11130 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 11077  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 5888 - 5847
Alignment:
Q  32 tatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  5888 tatgagttgttaagtgtacttgatgatgtttatgttaagttg 5847  T

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Target: scaffold0166 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 11059 - 11116
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaagttg 73  Q
    ||||||||| | || |||||||||||||| ||||| |||||| | |||||||||||||    
T  11059 attacatgatgatatctatgagttgttaagtgtacctgatgatgtttatgttaagttg 11116  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 34127 - 34180
Alignment:
Q  16 attacatgaggttacctatgagttgttaaatgtacttgatgaaggttatgttaa 69  Q
    ||||||||| | || |||||||||||||| |||||||||||| | |||||||||    
T  34127 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaa 34180  T

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Target: scaffold0420 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 9964 - 9912
Alignment:
Q  129 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 181  Q
    ||||||||| ||||||| ||||||||||||| || |||| ||||| |||||||    
T  9964 cggtgttgttatgtcatatgcatgagtcggtattgttggatgtaattgccata 9912  T

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