View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6094_high_16 (Length: 224)
Name: NF6094_high_16
Description: NF6094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6094_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 34094668 - 34094483
Alignment:
| Q |
33 |
ggatttgtatgctagaatgctgagggaatcaaagttaccacgccggaatcttaacaaaagtgaagaaatcgaaaatctagatccgtcggaaacttcgtcc |
132 |
Q |
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| T |
34094668 |
ggatttgtatgctagaatgctgagggaatcaaagttaccacgccggaatcttaacaaaagtgaagaaatcgaaaatctagatccgtcggaaacttcgtcg |
34094569 |
T |
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| Q |
133 |
gcgtcgctgacaaatccgagatgcatagaagctcctagacctcctttaaatacgattcaagatatagaacgaactccgtcgaaagc |
218 |
Q |
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| T |
34094568 |
gcgtcggtgacaaatccgagatgcatagaagctcctagacctcctttaaatacaattcaagatatagaacgaactccgtcgaaagc |
34094483 |
T |
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