View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6094_high_5 (Length: 440)
Name: NF6094_high_5
Description: NF6094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6094_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 18 - 428
Target Start/End: Original strand, 23193852 - 23194262
Alignment:
| Q |
18 |
agagtttgtctatcataaccaaaacttatctagaccatactatacatgtccatctgagtaatttaaatgatattttttggtcctgcatttatgtatttga |
117 |
Q |
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| T |
23193852 |
agagtttgtctatcataaccaaaacttatctagaccatactatacatgtccatctgagtaatttaaatgatattttttggtcctgcatttatgtatttga |
23193951 |
T |
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| Q |
118 |
ggttcttttttgcttacattttgttaacaacaaatgcttccttataggcatattctcctctcggttctccaggatcatgggttaagggagaaatcttgaa |
217 |
Q |
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| T |
23193952 |
ggttcttttttgcttacattttgttaacaacaaatgcttccttataggcatattctcctctcggttctccaggatcatgggttaagggagaaatcttgaa |
23194051 |
T |
|
| Q |
218 |
ggaaccaattttgattgaaattgctgaaaaacttaacaagtctccggcacaagtggctctaaggtggggtatccaaagtggtcacagtgtccttccaaag |
317 |
Q |
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| T |
23194052 |
ggaaccaattttgattgaaattgctgaaaaacttaacaagtctccggcacaagtggctctaaggtggggtatccaaagtggtcacagtgtccttccaaag |
23194151 |
T |
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| Q |
318 |
agtgtaaatgaatctaggatcaaagagaatcttagcttatttgattggtgtatccctccagaactcttctcaaaattctcacagattcaccaggtttgat |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23194152 |
agtgtaaatgaatctaggatcaaagagaatcttagcttatttgattggtgtatccctccagaactcttctcaaaattctcacagattcaccaggtttgat |
23194251 |
T |
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| Q |
418 |
cattgcctttg |
428 |
Q |
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||||||||||| |
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| T |
23194252 |
cattgcctttg |
23194262 |
T |
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