View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6094_high_6 (Length: 393)
Name: NF6094_high_6
Description: NF6094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6094_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 358
Target Start/End: Original strand, 44567552 - 44567899
Alignment:
| Q |
11 |
atgaagtacgcaatatcaaatttggtgattggataagcattttttaaaattagaataatttgctaaatagattcagataaagtttgattatgttttgagc |
110 |
Q |
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| T |
44567552 |
atgaagtacgcaatatcaaatttggtgattggataagcattttttaaaattagaataatttgctaaatagattcagataaagtttgattatgttttgagc |
44567651 |
T |
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| Q |
111 |
acaaacaagaaaaagaaattatactagttggtttgagttgtgtgcccctgatattctccctctcnnnnnnnnnnnnnnnttagaccgtggaaggagagag |
210 |
Q |
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| T |
44567652 |
acaaacaagaaaaagaaactatactagttggtttgagttgtgtgcccctgatattctccctctcaaaaaaagaaaaaaattagaccgtggaaggagagag |
44567751 |
T |
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| Q |
211 |
acggtaaaatttgataaaaagattaagagaaaaacaaattttaactagagaactctattatttgatatttaagtgagacaaatcttatatcataagttaa |
310 |
Q |
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| T |
44567752 |
acggtaaaatttgataaaaagattaagagaaaaacaaattttaactagagaactctattatttgatatttaagtgagacaaatcttgtatcataagttaa |
44567851 |
T |
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| Q |
311 |
tttctattattgaatnnnnnnntagattatgttaactagtgccatcat |
358 |
Q |
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| T |
44567852 |
tttctattattggataaaaaaatagattatgttaactagtgccatcat |
44567899 |
T |
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