View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6097_low_1 (Length: 1147)
Name: NF6097_low_1
Description: NF6097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6097_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 436; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 21 - 767
Target Start/End: Complemental strand, 54396121 - 54395375
Alignment:
| Q |
21 |
aaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggatgtta |
120 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| | ||||| || ||||||||||| ||||| |||| || || || |||||| ||||||| ||||||| |
|
|
| T |
54396121 |
aaccctgatgaagctgttgcttatggtgctgctgttcaagcagcgattttgagcggtgaaggtgatgaaaaggttcaagatcttctgttgcttgatgtta |
54396022 |
T |
|
| Q |
121 |
ctcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgttttcgac |
220 |
Q |
| |
|
|||||||| | || ||||| ||||| || || || ||||| || ||||| || ||||| || |||||||| |||||||||||| | || || || |
|
|
| T |
54396021 |
ctcctcttagtttggggttggaaactgctggtggtgttatgacgactttgattccaaggaacacgacgattcctacgaagaaggagcagattttctcaac |
54395922 |
T |
|
| Q |
221 |
ctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaat-ttgttgggcaagtttgagttgtcggg |
319 |
Q |
| |
|
|| || ||||||||||||||||| ||||||| || | ||||| ||| | |||| || ||||| ||| || ||||| || ||||| | | || |
|
|
| T |
54395921 |
ttactcagataaccaacctggtgttttgattcaagtttttgaaggtgaacgtgcaagaacaaaggataataatcttcttgggaaa-tttgaactcactgg |
54395823 |
T |
|
| Q |
320 |
tattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagctgga |
419 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54395822 |
tattcctcctgctccaagaggtgtaccacagatcaatgtttgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagctgga |
54395723 |
T |
|
| Q |
420 |
gtgaagaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggtgaaagatgcagagaagtataaggcagaggacg |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
54395722 |
gtgaagaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggtgaaagatgcagagaagtataaggcagaggatg |
54395623 |
T |
|
| Q |
520 |
aagaggtgaagaagaaagtggaggcgaagaattcacttgagaattatgcttataatatgaggaatacaataaaggatgagaagattggtgggaagttgag |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54395622 |
aagaggtgaagaagaaagtggaggcgaagaattcaattgagaattatgcttataatatgaggaatacaattaaggatgagaagattggtgggaagttgag |
54395523 |
T |
|
| Q |
620 |
tcatgatgataaggagaagattgagaaggctgtggaagatgctatacagtggttggaggggaatcaaatggcggaagtggatgagtttgaggataagcag |
719 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54395522 |
tcatgaagataaggagaagattgagaaggctgtggaagatgcaatacagtggttggaggggaatcaaatggcggaagtggatgagtttgaggataagcag |
54395423 |
T |
|
| Q |
720 |
aaggagttggaaggaatttgtaatcctattattgctaagatgtatcaa |
767 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54395422 |
aaggagttggaaggaatttgtaatcctattattgctaagatgtatcaa |
54395375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 17 - 391
Target Start/End: Original strand, 23597051 - 23597425
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597051 |
catcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggat |
23597150 |
T |
|
| Q |
117 |
gttactcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgtttt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597151 |
gttactcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgtttt |
23597250 |
T |
|
| Q |
217 |
cgacctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtc |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23597251 |
cgacctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagctgtc |
23597350 |
T |
|
| Q |
317 |
gggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaa |
391 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||| ||| || || ||||| ||||| ||||| || ||||| |
|
|
| T |
23597351 |
gggtattcctcctgctccaaggggtgttcctcagatcactgtctgctttgacatcgatgccaatggcattttgaa |
23597425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 643
Target Start/End: Original strand, 23588199 - 23588825
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggat |
116 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| || || | |||||||||||||||||| || || |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
23588199 |
catcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtggtgagggcaatgagaaagtgcaggatctgttgttgctggat |
23588298 |
T |
|
| Q |
117 |
gttactcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgtttt |
216 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
23588299 |
gttactcctctctcccttggtttggagaccgcaggaggtgtcatgactgtattgattcctagaaacacaaccattcctaccaagaaggagcaagtgtttt |
23588398 |
T |
|
| Q |
217 |
cgacctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtc |
316 |
Q |
| |
|
| ||||| |||||||| |||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588399 |
caacctactctgataatcaacctggtgtgttgattcaagtctatgaaggcgaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtc |
23588498 |
T |
|
| Q |
317 |
gggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagct |
416 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||| ||| || || ||||||||||| ||||| || ||||| || || || || || || ||| | |
|
|
| T |
23588499 |
gggtatccctcctgctccaaggggtgttcctcagatcactgtctgctttgacattgatgccaatggcattttgaatgtctcagcagaggacaagacaaca |
23588598 |
T |
|
| Q |
417 |
ggagtgaagaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggtgaaagatgcagagaagtataaggcagagg |
516 |
Q |
| |
|
|| ||| |||||||| || ||||| ||||| ||||| ||| | ||||||||| || |||||||||||| | || || || ||||| ||| | |||| |
|
|
| T |
23588599 |
gggcagaaaaacaagattacaatcaccaatgacaagggtaggctctccaaggaagaaattgagaagatggtgcaggaagctgaaaagtacaagtctgagg |
23588698 |
T |
|
| Q |
517 |
acgaagaggtgaagaagaaagtggaggcgaagaattcacttgagaattatgcttataatatgaggaatacaataaaggatgagaagattggtgggaagtt |
616 |
Q |
| |
|
|||| ||| || |||||||||||||| |||||| |||||||||| ||||| || || |||||||| ||||| || || || ||||||| | |||||| |
|
|
| T |
23588699 |
acgaggagcacaaaaagaaagtggaggccaagaatgcacttgagaactatgcctacaacatgaggaacacaatcaaagacgacaagattgcttcgaagtt |
23588798 |
T |
|
| Q |
617 |
gagtcatgatgataaggagaagattga |
643 |
Q |
| |
|
| | |||||||||| |||| ||||| |
|
|
| T |
23588799 |
gtctgctgatgataagaagaaaattga |
23588825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 825 - 1089
Target Start/End: Complemental strand, 54395314 - 54395056
Alignment:
| Q |
825 |
tctaatgggacaggctctggagctggacctaagattgaagaggttgactaagtttttgaaacattggttgtatgtgtatgaaacttgtcttgtgtcctgt |
924 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
54395314 |
tctaatgggacaggctctggagctggacctaagattgaagaggttgactaagtttttgaaacattggttgtatgtgtatgaaa----------gtcctgt |
54395225 |
T |
|
| Q |
925 |
taatgttt-agttacagaaggtaggtaggcttgagtgtctaaggttttatat--gtctttttt-agttttgtgtgatcagtgtaattgagagatgaaata |
1020 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
54395224 |
taatgttttagttacagaaggtaggtaggcttgagtgtctaaggttttatatatgtctttttttagttttgtgtgatcagtgtaattgagagatgaaata |
54395125 |
T |
|
| Q |
1021 |
aaatgaatgcaatttaatttctgtcaatttatatcgcttaaatctgatactacctgctaagaggtggct |
1089 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
54395124 |
aaatgaatgtaatttaatttctgtcaatttatatcgcttaaatctgatactacctgttaagaggtggct |
54395056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9336358 - 9336413
Alignment:
| Q |
18 |
atcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgag |
73 |
Q |
| |
|
|||||||| |||||||||||||||||||| || || | ||||||||||||||||| |
|
|
| T |
9336358 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaagctgctattttgag |
9336413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 98; Significance: 1e-47; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 17 - 502
Target Start/End: Complemental strand, 8102369 - 8101884
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| || || | ||||||||||| ||||| || ||||| |||||||| || || ||| | ||| | ||||| |
|
|
| T |
8102369 |
catcaaccccgacgaggctgttgcttatggtgccgctgttcaagctgctatcttgagtggtgaaggaaatgagaaggttcaagatttgttgcttttggat |
8102270 |
T |
|
| Q |
117 |
gttactcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgtttt |
216 |
Q |
| |
|
|| || || | || | |||||||||||||||||||| ||||||||||| || ||||| || ||||| || ||||| |||||||||||||| || || | |
|
|
| T |
8102269 |
gtcaccccattgtctcaaggtttggagactgcaggaggtgtcatgactgtattgattccaaggaacactaccattccaaccaagaaggagcaagttttct |
8102170 |
T |
|
| Q |
217 |
cgacctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtc |
316 |
Q |
| |
|
| || ||||| || |||||||||||||| |||| || || || ||||| || ||||| || || |||||||| |||||||| ||||||||| | || |
|
|
| T |
8102169 |
ctacgtattcagacaaccaacctggtgttttgatccaagtttatgaaggtgagagaaccagaaccaaggataacaacttgttgggtaagtttgagctttc |
8102070 |
T |
|
| Q |
317 |
gggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagct |
416 |
Q |
| |
|
|| |||||||| || || | ||||| || ||||||| ||| ||||| || |||||||| |||||||| ||||| || |||||||| || |||||| | |
|
|
| T |
8102069 |
cggaattcctccagcaccccgcggtgttcctcagatcactgtttgttttgatattgatgccaatggtatcttgaatgtctctgctgaggacaaaacaacc |
8101970 |
T |
|
| Q |
417 |
ggagtgaagaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggtgaaagatgcagagaa |
502 |
Q |
| |
|
|| |||||||||||| || ||||| || |||||||| |||||| |||||||| || ||||||||||| |||| |||||||| |
|
|
| T |
8101969 |
gggcagaagaacaagattaccatcaccaacgataagggaaggttgtcaaaggaagaaatcgagaagatggtccaagaagcagagaa |
8101884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 24 - 598
Target Start/End: Complemental strand, 39985341 - 39984767
Alignment:
| Q |
24 |
cctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggatgttactc |
123 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | || |||||||| ||||| || || ||||||||||| || ||||||||| | | ||||||| || | |
|
|
| T |
39985341 |
cctgatgaggctgttgcatatggtgctgctgttcaggctgctatcttgagtggtgagggcaatgagaaggttcaggatcttctccttttggatgtcaccc |
39985242 |
T |
|
| Q |
124 |
ctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgttttcgaccta |
223 |
Q |
| |
|
|||| || ||||||||||||||||| || || || ||||||||| | || || || || || || ||||| || ||||| || ||||| || || || || |
|
|
| T |
39985241 |
ctctatctcttggtttggagactgctggtggtgtgatgactgtgcttatcccaaggaataccactattccaacaaagaaagaacaggttttctctacata |
39985142 |
T |
|
| Q |
224 |
ttctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtcgggtatt |
323 |
Q |
| |
|
|||||| ||||| ||||| ||| |||| || || | |||||||| || ||||| || | || ||||||||||||||||||||||| | || || ||| |
|
|
| T |
39985141 |
ttctgacaaccagcctggcgtgttgatccaagtttttgaaggagagaggacaagaacaagagacaacaatttgttgggcaagtttgaactttccggcatt |
39985042 |
T |
|
| Q |
324 |
cctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagctggagtga |
423 |
Q |
| |
|
|||||||| || || ||||| || || |||| ||| || || ||||||||||| |||||||| ||||| || ||||| ||||| |||||| |||| || |
|
|
| T |
39985041 |
cctcctgcccccagaggtgttccccaaatcactgtgtgctttgacattgatgccaatggtatcttgaatgtctctgcagaagacaaaacaactggccaga |
39984942 |
T |
|
| Q |
424 |
agaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggtgaaagatgcagagaagtataaggcagaggacgaaga |
523 |
Q |
| |
|
||||||| || || ||||| ||||| ||||| || | |||||||| || ||||||||||| |||| ||||||||||| ||| | || || ||||| |
|
|
| T |
39984941 |
agaacaaaatcaccatcaccaatgacaagggtagactttcaaaggaagacattgagaagatggttcaagaggcagagaagtacaagtcggaagatgaaga |
39984842 |
T |
|
| Q |
524 |
ggtgaagaagaaagtggaggcgaagaattcacttgagaattatgcttataatatgaggaatacaataaaggatga |
598 |
Q |
| |
|
| |||||||| || ||||| |||||| || | || || ||||| || || |||||||| || || |||||||| |
|
|
| T |
39984841 |
gcataagaagaaggtcgaggccaagaatgcattggaaaactatgcatacaacatgaggaacaccattaaggatga |
39984767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 487
Target Start/End: Original strand, 8017880 - 8018349
Alignment:
| Q |
18 |
atcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctggatg |
117 |
Q |
| |
|
|||||||| || ||||||||||||||||| || || | ||||| || |||||||| || ||||||||||| || || || ||| | || | |||||| |
|
|
| T |
8017880 |
atcaacccagacgaggctgttgcttatggtgccgctgtacaagcagcaattttgagtggtgaaggcaatgaaaaggttcaagatttgctgcttttggatg |
8017979 |
T |
|
| Q |
118 |
ttactcctctttcccttggtttggagactgcaggaggagtcatgactgtgttaattccgagaaacacaacaattcctaccaagaaggagcaggtgttttc |
217 |
Q |
| |
|
| ||||| | || || ||| | || ||||| || || ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| || || || |
|
|
| T |
8017980 |
tcactccattgtctctgggtctagaaactgctggtggtgtcatgactgtattaattccaaggaacaccacaattccaaccaagaaggagcaagttttctc |
8018079 |
T |
|
| Q |
218 |
gacctattctgataaccaacctggtgtgctgattcaggtctacgaaggagaaagaacaaggactcgtgataacaatttgttgggcaagtttgagttgtcg |
317 |
Q |
| |
|
|| || || |||||||||||||||||| |||| || || || ||||| || ||| |||| || | || ||||| |||||||| || || ||| | || |
|
|
| T |
8018080 |
tacttactcagataaccaacctggtgtgttgatccaagtttatgaaggtgagagagcaagaaccagagacaacaacttgttgggaaaattcgagctttct |
8018179 |
T |
|
| Q |
318 |
ggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggtatattgaacgtttctgctgaagataaaacagctg |
417 |
Q |
| |
|
|| |||||||| || || | ||||| || || |||| || || |||||||||||||| |||||||| ||||| || |||||||| || |||||| ||| |
|
|
| T |
8018180 |
ggcattcctccagcaccccgtggtgttcctcaaatcacagtttgcttcgacattgatgccaatggtatcttgaatgtctctgctgaggacaaaacaactg |
8018279 |
T |
|
| Q |
418 |
gagtgaagaacaagataacgatcacgaatgataaggggaggttgagcaaggaagagatagagaagatggt |
487 |
Q |
| |
|
| |||||||||||| || ||||| ||||| || || |||||| |||||||| || ||||||||||| |
|
|
| T |
8018280 |
ggcagaagaacaagattaccatcaccaatgacaaaggtaggttgtctaaggaagaaattgagaagatggt |
8018349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 8576028 - 8575980
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgct |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| | |||||||||| |
|
|
| T |
8576028 |
catcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgct |
8575980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 8537738 - 8537679
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcgg |
76 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| | ||| |||||| | |||||||| |
|
|
| T |
8537738 |
catcaaccctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcgg |
8537679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 8581402 - 8581367
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgc |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8581402 |
catcaaccctgatgaggctgttgcttatggtgctgc |
8581367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 17259943 - 17259908
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatggcgctgc |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17259943 |
catcaaccctgatgaggctgttgcttatggtgctgc |
17259908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 17267640 - 17267606
Alignment:
| Q |
18 |
atcaaccctgatgaggctgttgcttatggcgctgc |
52 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17267640 |
atcaaccctgatgaggctgttgcttatggtgctgc |
17267606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 29582307 - 29582336
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatgg |
46 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
29582307 |
catcaaccctgatgaggctgttgcttatgg |
29582336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 17648662 - 17648789
Alignment:
| Q |
285 |
gataacaatttgttgggcaagtttgagttgtcgggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggta |
384 |
Q |
| |
|
||||||||||||||||| || ||| | | || || || ||||||||||| || ||||| |||||||||| |||||| || ||||||||||| ||||||| |
|
|
| T |
17648662 |
gataacaatttgttgggaaaatttcaactttccggcatccctcctgctcctagaggtgttccacagatcagtgtatgctttgacattgatgctaatggta |
17648761 |
T |
|
| Q |
385 |
tattgaacgtttctgctgaagataaaac |
412 |
Q |
| |
|
||||| | || | ||||||||| ||||| |
|
|
| T |
17648762 |
tattggatgtctttgctgaagacaaaac |
17648789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 406
Target Start/End: Original strand, 17706409 - 17706530
Alignment:
| Q |
285 |
gataacaatttgttgggcaagtttgagttgtcgggtattcctcctgctccaaggggtgtaccacagatcaatgtatgtttcgacattgatgcgaatggta |
384 |
Q |
| |
|
||||||||||||||||| || ||| | | || || || ||||||||||| ||||||| |||||||||| |||||| || ||||||||| | ||||||| |
|
|
| T |
17706409 |
gataacaatttgttgggaaaatttcaactttccggcatccctcctgctccttggggtgttccacagatcattgtatgctttgacattgatcctaatggta |
17706508 |
T |
|
| Q |
385 |
tattgaacgtttctgctgaaga |
406 |
Q |
| |
|
||||||| || | ||||||||| |
|
|
| T |
17706509 |
tattgaatgtctttgctgaaga |
17706530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 43625110 - 43625058
Alignment:
| Q |
21 |
aaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgag |
73 |
Q |
| |
|
|||||||||||||||||||||||||| || || | ||| |||||||||||||| |
|
|
| T |
43625110 |
aaccctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgag |
43625058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 16662458 - 16662487
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatgg |
46 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16662458 |
catcaaccctgatgaggctgttgcttatgg |
16662487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 4679024 - 4679081
Alignment:
| Q |
18 |
atcaaccctgatgaggctgttgcttatggcgctgcagaccaagctgctattttgagcg |
75 |
Q |
| |
|
|||||||| |||||||||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
4679024 |
atcaacccagatgaggctgttgcttatggtgcagctatccaagctgctattttgagcg |
4679081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 15594736 - 15594707
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatgg |
46 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
15594736 |
catcaaccctgatgaggctgttgcttatgg |
15594707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 12528206 - 12528177
Alignment:
| Q |
17 |
catcaaccctgatgaggctgttgcttatgg |
46 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
12528206 |
catcaaccctgatgaggctgttgcttatgg |
12528177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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