View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6099_high_11 (Length: 331)
Name: NF6099_high_11
Description: NF6099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6099_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 233231 - 233539
Alignment:
| Q |
1 |
gctcataatatagctcctatgtttgtacgattaaacctggtccctgctacatagttgtaatggatggtagtggtctgatattatggtaaagtaattaaca |
100 |
Q |
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| T |
233231 |
gctcataatatagctcctatgtttgtacgattaaacctggtccctgctacatagttgtaatggatggtagtggtctgatattatggtaaagtaattaaca |
233330 |
T |
|
| Q |
101 |
cattcaatgcaataatgtaaataaataaattaacctaagctagctacattttattgcatgtcggttgcaagattcgctgagctcttataacctttaatgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233331 |
cattcaatgcaataatgtaaataaataaattaacctaagctagctacattttattgcatgtcggttgcaagattcgctgagctcttataacctttaatgc |
233430 |
T |
|
| Q |
201 |
acactttatttattttttagctagctagccctaaaatgcaatgcaagtgtatcaaatagtaacccctgattttattcttcaattgaagtatcacgtctca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
233431 |
acactttatttattttttagctagctagccctaaaatgcaatgcaagtgtattaaatagtaacccctgattttattcttcaattgaagtatcacgactca |
233530 |
T |
|
| Q |
301 |
ttttacagc |
309 |
Q |
| |
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||||||||| |
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| T |
233531 |
ttttacagc |
233539 |
T |
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