View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6099_high_27 (Length: 247)
Name: NF6099_high_27
Description: NF6099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6099_high_27 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 20526102 - 20526327
Alignment:
| Q |
1 |
aatgggactaataagtgcttcaactcttcaagacggtgctttcaactttccattagtcgaacatagtataaaagtaaatcgatttgttttgttattgcta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20526102 |
aatgggactaataagtgcttcaactcttcaagacggtgctttcaactttccattagtcgaacatagtataaaagtaaatcgatttgttttgttattgcta |
20526201 |
T |
|
| Q |
101 |
atgcaaaacaacacgatgaaggcaaaacaatgtgttttgttctagaaattacaaaaaacatcattcactacaatattgttttgactaaaggagagttgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
20526202 |
gtgcaaaacaacacgatgaaggcaaaacaatgtgttttgttctagaaattacaaaaaacatcattcactacaatattgttttgactaaaggagagttgaa |
20526301 |
T |
|
| Q |
201 |
gtctcccgctttggaaagttgaaaca |
226 |
Q |
| |
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||||||| |||||||||||||||||| |
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|
| T |
20526302 |
gtctcccactttggaaagttgaaaca |
20526327 |
T |
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