View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6099_low_25 (Length: 269)

Name: NF6099_low_25
Description: NF6099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6099_low_25
NF6099_low_25
[»] chr4 (55 HSPs)
chr4 (1-269)||(5372950-5373218)
chr4 (1-269)||(12136124-12136385)
chr4 (5-141)||(12732271-12732409)
chr4 (1-136)||(19082906-19083041)
chr4 (83-269)||(41919073-41919253)
chr4 (96-208)||(13595908-13596021)
chr4 (185-269)||(14569666-14569749)
chr4 (185-241)||(55378769-55378825)
chr4 (185-267)||(15116127-15116209)
chr4 (185-267)||(43283273-43283354)
chr4 (185-241)||(8372546-8372602)
chr4 (197-269)||(15216069-15216141)
chr4 (185-241)||(15274668-15274724)
chr4 (185-241)||(18246117-18246173)
chr4 (185-241)||(26678118-26678174)
chr4 (185-241)||(10642313-10642369)
chr4 (185-241)||(18166813-18166869)
chr4 (185-241)||(19699611-19699667)
chr4 (185-241)||(19710196-19710252)
chr4 (185-241)||(19998456-19998512)
chr4 (185-241)||(34393324-34393380)
chr4 (83-262)||(19557499-19557671)
chr4 (149-269)||(50223992-50224105)
chr4 (149-269)||(54365911-54366025)
chr4 (185-237)||(7134513-7134565)
chr4 (185-241)||(9293651-9293707)
chr4 (185-241)||(15211454-15211510)
chr4 (185-241)||(17150253-17150309)
chr4 (184-262)||(38763040-38763112)
chr4 (83-268)||(10239268-10239446)
chr4 (230-268)||(24237195-24237233)
chr4 (197-262)||(9650118-9650182)
chr4 (185-241)||(16520740-16520796)
chr4 (149-260)||(17378031-17378136)
chr4 (185-241)||(22356621-22356677)
chr4 (185-217)||(37958921-37958953)
chr4 (149-269)||(47470167-47470282)
chr4 (184-262)||(5407412-5407484)
chr4 (83-136)||(15216191-15216245)
chr4 (1-46)||(14569478-14569522)
chr4 (228-269)||(19623873-19623914)
chr4 (1-46)||(19624090-19624134)
chr4 (83-141)||(24237077-24237137)
chr4 (228-269)||(42707007-42707048)
chr4 (185-217)||(7187805-7187837)
chr4 (185-217)||(7966474-7966506)
chr4 (121-217)||(13448913-13449007)
chr4 (228-268)||(17213700-17213740)
chr4 (185-217)||(18496357-18496389)
chr4 (185-217)||(20813913-20813945)
chr4 (185-217)||(21961463-21961495)
chr4 (185-217)||(30236434-30236466)
chr4 (185-217)||(34198048-34198080)
chr4 (185-217)||(41167792-41167824)
chr4 (185-217)||(44054113-44054145)
[»] chr5 (47 HSPs)
chr5 (1-269)||(20456395-20456664)
chr5 (1-269)||(16837584-16837836)
chr5 (1-269)||(14345487-14345771)
chr5 (108-269)||(11963789-11963950)
chr5 (1-141)||(23412058-23412199)
chr5 (83-269)||(19872082-19872262)
chr5 (185-269)||(5453128-5453212)
chr5 (186-269)||(3671689-3671772)
chr5 (185-262)||(24227771-24227848)
chr5 (108-262)||(3420666-3420812)
chr5 (111-260)||(24082309-24082450)
chr5 (185-241)||(10246-10302)
chr5 (185-241)||(111178-111234)
chr5 (185-241)||(1221831-1221887)
chr5 (185-241)||(9732787-9732843)
chr5 (185-241)||(10780310-10780366)
chr5 (185-241)||(11340538-11340594)
chr5 (185-241)||(18780240-18780296)
chr5 (185-241)||(25211987-25212043)
chr5 (185-241)||(25276139-25276195)
chr5 (185-241)||(34937510-34937566)
chr5 (83-264)||(23236240-23236414)
chr5 (185-267)||(23492175-23492256)
chr5 (185-262)||(17907754-17907830)
chr5 (185-241)||(17473897-17473953)
chr5 (185-241)||(22885239-22885295)
chr5 (185-241)||(25944755-25944811)
chr5 (185-237)||(28888154-28888206)
chr5 (185-241)||(35793350-35793406)
chr5 (113-262)||(26561621-26561762)
chr5 (185-241)||(11579861-11579917)
chr5 (185-241)||(29192862-29192918)
chr5 (230-269)||(23412254-23412293)
chr5 (114-217)||(33628143-33628246)
chr5 (111-217)||(6454900-6455004)
chr5 (1-46)||(37985912-37985957)
chr5 (185-241)||(43445906-43445962)
chr5 (185-236)||(431044-431095)
chr5 (185-267)||(37189945-37190021)
chr5 (83-136)||(11765666-11765719)
chr5 (185-241)||(19497875-19497931)
chr5 (185-217)||(20710717-20710749)
chr5 (185-217)||(21392377-21392409)
chr5 (185-217)||(21661615-21661647)
chr5 (185-217)||(23453129-23453161)
chr5 (185-217)||(23460373-23460405)
chr5 (185-217)||(23464634-23464666)
[»] chr8 (55 HSPs)
chr8 (4-269)||(22311131-22311398)
chr8 (1-269)||(22319708-22319964)
chr8 (83-269)||(19333855-19334042)
chr8 (83-262)||(45561530-45561710)
chr8 (83-268)||(17264666-17264852)
chr8 (1-124)||(16000252-16000374)
chr8 (1-124)||(22883859-22883982)
chr8 (1-269)||(11600145-11600397)
chr8 (9-124)||(11542086-11542199)
chr8 (97-269)||(25608087-25608254)
chr8 (149-269)||(23216880-23216999)
chr8 (83-262)||(22499136-22499309)
chr8 (185-269)||(25293794-25293877)
chr8 (185-269)||(25755783-25755866)
chr8 (83-262)||(24554408-24554580)
chr8 (185-241)||(645975-646031)
chr8 (83-217)||(20707956-20708089)
chr8 (185-241)||(23509007-23509063)
chr8 (185-269)||(23879217-23879300)
chr8 (108-260)||(24906121-24906268)
chr8 (184-262)||(18120251-18120328)
chr8 (185-241)||(831710-831766)
chr8 (185-241)||(3433723-3433779)
chr8 (185-241)||(17343419-17343475)
chr8 (185-241)||(18610367-18610423)
chr8 (185-241)||(24108662-24108718)
chr8 (185-241)||(24931013-24931069)
chr8 (185-241)||(28835919-28835975)
chr8 (83-269)||(33170419-33170599)
chr8 (185-241)||(41509127-41509183)
chr8 (185-236)||(269890-269941)
chr8 (187-240)||(22008553-22008606)
chr8 (185-241)||(24719518-24719575)
chr8 (185-241)||(6776427-6776483)
chr8 (185-241)||(13664748-13664804)
chr8 (185-241)||(13724023-13724079)
chr8 (185-241)||(16043250-16043306)
chr8 (185-241)||(22909540-22909596)
chr8 (185-241)||(16041574-16041630)
chr8 (183-261)||(17500109-17500181)
chr8 (183-264)||(18263246-18263321)
chr8 (232-266)||(23350457-23350491)
chr8 (228-269)||(22884069-22884110)
chr8 (149-269)||(23118676-23118789)
chr8 (232-269)||(24237327-24237364)
chr8 (184-217)||(38531826-38531859)
chr8 (185-241)||(23631178-23631234)
chr8 (82-155)||(23350327-23350401)
chr8 (228-269)||(15931626-15931667)
chr8 (184-217)||(21200031-21200064)
chr8 (185-214)||(23835490-23835519)
chr8 (157-217)||(11542213-11542273)
chr8 (185-217)||(20655966-20655998)
chr8 (185-217)||(21679379-21679411)
chr8 (185-217)||(25120690-25120722)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-269)||(10359-10613)
[»] chr3 (66 HSPs)
chr3 (1-269)||(8602377-8602625)
chr3 (1-269)||(10902551-10902803)
chr3 (17-141)||(38378216-38378342)
chr3 (64-269)||(15551725-15551920)
chr3 (5-124)||(37918858-37918978)
chr3 (3-141)||(40041516-40041656)
chr3 (149-265)||(17760636-17760752)
chr3 (149-265)||(19061956-19062072)
chr3 (185-268)||(6817463-6817546)
chr3 (109-267)||(15988721-15988873)
chr3 (83-269)||(5230435-5230616)
chr3 (189-269)||(12950836-12950916)
chr3 (79-269)||(14182231-14182416)
chr3 (83-264)||(43429368-43429543)
chr3 (185-267)||(17936394-17936475)
chr3 (111-262)||(6230494-6230637)
chr3 (185-269)||(38813234-38813318)
chr3 (186-241)||(7851623-7851678)
chr3 (1-63)||(8687940-8688002)
chr3 (1-63)||(9039809-9039871)
chr3 (83-262)||(17320410-17320583)
chr3 (185-241)||(12796662-12796718)
chr3 (111-262)||(14819681-14819824)
chr3 (185-241)||(16818982-16819038)
chr3 (185-241)||(18908618-18908674)
chr3 (185-241)||(22272973-22273029)
chr3 (185-267)||(12490652-12490733)
chr3 (187-241)||(51160340-51160394)
chr3 (185-241)||(19944744-19944800)
chr3 (183-269)||(41659870-41659950)
chr3 (185-236)||(48419905-48419956)
chr3 (187-241)||(30140925-30140979)
chr3 (185-241)||(11812740-11812796)
chr3 (185-236)||(9304888-9304939)
chr3 (197-267)||(11381033-11381102)
chr3 (1-46)||(293972-294017)
chr3 (228-269)||(37918738-37918779)
chr3 (3-136)||(20418842-20418978)
chr3 (185-241)||(33339977-33340033)
chr3 (185-237)||(38166151-38166203)
chr3 (234-269)||(25106176-25106211)
chr3 (111-217)||(4147567-4147671)
chr3 (111-217)||(4164119-4164223)
chr3 (228-269)||(40041405-40041447)
chr3 (228-265)||(17391285-17391322)
chr3 (185-262)||(20419021-20419095)
chr3 (232-269)||(31414474-31414511)
chr3 (185-241)||(54045708-54045765)
chr3 (228-268)||(14968127-14968167)
chr3 (185-217)||(40937888-40937920)
chr3 (185-216)||(23490714-23490745)
chr3 (228-262)||(11636812-11636846)
chr3 (234-267)||(11517291-11517324)
chr3 (185-217)||(6148746-6148778)
chr3 (185-217)||(11330863-11330895)
chr3 (185-217)||(11884106-11884138)
chr3 (185-217)||(12563420-12563452)
chr3 (185-217)||(14296675-14296707)
chr3 (185-217)||(14302302-14302334)
chr3 (185-217)||(15548773-15548805)
chr3 (185-217)||(17098858-17098890)
chr3 (185-217)||(25769479-25769511)
chr3 (185-217)||(35121866-35121898)
chr3 (185-217)||(39654108-39654140)
chr3 (185-217)||(47786758-47786790)
chr3 (185-217)||(53900485-53900517)
[»] scaffold0009 (4 HSPs)
scaffold0009 (1-124)||(98920-99042)
scaffold0009 (185-241)||(270268-270324)
scaffold0009 (228-269)||(256626-256667)
scaffold0009 (228-264)||(98797-98833)
[»] chr1 (29 HSPs)
chr1 (4-215)||(78389-78590)
chr1 (1-269)||(20191821-20192073)
chr1 (1-269)||(25092931-25093184)
chr1 (83-211)||(33384091-33384220)
chr1 (1-269)||(20820509-20820776)
chr1 (83-262)||(40438121-40438295)
chr1 (111-262)||(52397854-52397997)
chr1 (185-241)||(20252281-20252337)
chr1 (185-241)||(22080129-22080185)
chr1 (185-241)||(22352224-22352280)
chr1 (185-232)||(41217482-41217529)
chr1 (185-241)||(22364882-22364938)
chr1 (183-269)||(40555631-40555711)
chr1 (185-242)||(24498444-24498501)
chr1 (228-269)||(33395168-33395209)
chr1 (183-269)||(41213497-41213576)
chr1 (228-262)||(46144067-46144101)
chr1 (185-269)||(21193427-21193504)
chr1 (185-241)||(15863513-15863569)
chr1 (1-34)||(5472461-5472494)
chr1 (149-261)||(5770042-5770145)
chr1 (184-217)||(18164438-18164471)
chr1 (1-34)||(21041864-21041897)
chr1 (185-217)||(9786337-9786369)
chr1 (157-217)||(21042023-21042082)
chr1 (185-217)||(22148264-22148296)
chr1 (185-217)||(35053086-35053118)
chr1 (185-217)||(36358197-36358229)
chr1 (185-217)||(51658279-51658311)
[»] chr2 (34 HSPs)
chr2 (3-269)||(25593246-25593496)
chr2 (1-267)||(18533430-18533679)
chr2 (99-262)||(43640530-43640689)
chr2 (79-269)||(29111926-29112111)
chr2 (185-262)||(45620278-45620354)
chr2 (185-241)||(3801311-3801367)
chr2 (185-241)||(12638192-12638248)
chr2 (185-269)||(19435759-19435843)
chr2 (185-269)||(19657724-19657807)
chr2 (185-241)||(19888925-19888981)
chr2 (185-241)||(42180407-42180463)
chr2 (185-241)||(21140078-21140134)
chr2 (108-269)||(24272241-24272394)
chr2 (149-269)||(6092676-6092789)
chr2 (99-240)||(24089281-24089420)
chr2 (185-241)||(21276540-21276596)
chr2 (185-241)||(24966364-24966420)
chr2 (185-241)||(34822254-34822310)
chr2 (185-241)||(38706998-38707054)
chr2 (185-230)||(7509865-7509910)
chr2 (228-262)||(20271209-20271243)
chr2 (185-217)||(7319663-7319695)
chr2 (232-266)||(24839670-24839704)
chr2 (185-262)||(24868806-24868877)
chr2 (185-215)||(25600119-25600149)
chr2 (185-217)||(269374-269406)
chr2 (185-217)||(4450194-4450226)
chr2 (185-217)||(22137694-22137726)
chr2 (185-217)||(22581881-22581913)
chr2 (149-217)||(23614457-23614525)
chr2 (185-217)||(24296442-24296474)
chr2 (185-217)||(28972217-28972249)
chr2 (185-217)||(32738731-32738763)
chr2 (185-217)||(36892651-36892683)
[»] scaffold0601 (1 HSPs)
scaffold0601 (1-124)||(3353-3476)
[»] scaffold0725 (1 HSPs)
scaffold0725 (1-162)||(7158-7320)
[»] scaffold0216 (2 HSPs)
scaffold0216 (1-162)||(23048-23210)
scaffold0216 (183-269)||(22966-23046)
[»] chr7 (51 HSPs)
chr7 (1-124)||(18081277-18081401)
chr7 (9-269)||(28718124-28718373)
chr7 (151-269)||(14278724-14278841)
chr7 (111-268)||(21677344-21677500)
chr7 (83-269)||(4482436-4482615)
chr7 (109-269)||(39293975-39294129)
chr7 (1-268)||(15980350-15980616)
chr7 (96-208)||(9641224-9641337)
chr7 (79-269)||(13460489-13460675)
chr7 (185-269)||(4072821-4072904)
chr7 (187-267)||(7286502-7286581)
chr7 (1-60)||(17923058-17923117)
chr7 (185-241)||(7290847-7290903)
chr7 (185-241)||(14253268-14253324)
chr7 (185-241)||(16416448-16416504)
chr7 (185-236)||(369083-369134)
chr7 (149-269)||(9322894-9323007)
chr7 (185-241)||(11285287-11285343)
chr7 (185-241)||(16481034-16481090)
chr7 (185-236)||(2192808-2192859)
chr7 (185-232)||(12545815-12545862)
chr7 (1-60)||(17926895-17926954)
chr7 (185-267)||(13868060-13868141)
chr7 (185-262)||(15305693-15305768)
chr7 (185-241)||(18305836-18305892)
chr7 (1-61)||(39294194-39294254)
chr7 (184-262)||(12245941-12246017)
chr7 (185-238)||(3048007-3048060)
chr7 (185-269)||(5617721-5617799)
chr7 (234-269)||(3193869-3193904)
chr7 (1-56)||(12245763-12245820)
chr7 (192-262)||(14302693-14302762)
chr7 (3-104)||(14302845-14302942)
chr7 (1-46)||(16370399-16370444)
chr7 (185-269)||(16915915-16915993)
chr7 (149-217)||(18920976-18921042)
chr7 (99-217)||(14938890-14939007)
chr7 (99-217)||(15366483-15366600)
chr7 (99-217)||(9058497-9058613)
chr7 (183-217)||(31499504-31499538)
chr7 (184-217)||(15628948-15628981)
chr7 (228-269)||(19065539-19065580)
chr7 (185-217)||(141815-141847)
chr7 (185-236)||(2024634-2024683)
chr7 (1-41)||(4073050-4073090)
chr7 (186-214)||(4437141-4437169)
chr7 (185-217)||(13375949-13375981)
chr7 (185-217)||(13388251-13388283)
chr7 (185-217)||(15914294-15914326)
chr7 (185-217)||(45455604-45455636)
chr7 (185-217)||(49049746-49049778)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-124)||(19412-19535)
scaffold0115 (238-269)||(19631-19662)
[»] scaffold0088 (2 HSPs)
scaffold0088 (1-124)||(45558-45682)
scaffold0088 (236-268)||(45432-45464)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-141)||(73245-73385)
scaffold0047 (228-269)||(1949-1990)
[»] scaffold0561 (1 HSPs)
scaffold0561 (5-124)||(4720-4839)
[»] scaffold0331 (1 HSPs)
scaffold0331 (5-136)||(11429-11560)
[»] scaffold0073 (3 HSPs)
scaffold0073 (14-115)||(49579-49680)
scaffold0073 (14-115)||(54110-54211)
scaffold0073 (155-269)||(55672-55780)
[»] chr6 (37 HSPs)
chr6 (79-268)||(17375555-17375739)
chr6 (83-261)||(22595494-22595666)
chr6 (83-269)||(29162739-29162919)
chr6 (83-260)||(34965100-34965273)
chr6 (83-269)||(16131426-16131608)
chr6 (108-259)||(22467942-22468086)
chr6 (109-267)||(21929634-21929786)
chr6 (185-241)||(4988927-4988983)
chr6 (185-241)||(16235707-16235763)
chr6 (185-241)||(19627437-19627493)
chr6 (185-241)||(23975647-23975703)
chr6 (185-241)||(33316611-33316667)
chr6 (185-241)||(35017650-35017706)
chr6 (108-269)||(19852456-19852609)
chr6 (185-241)||(14628566-14628622)
chr6 (185-241)||(18005055-18005111)
chr6 (185-241)||(18578773-18578829)
chr6 (185-241)||(18835549-18835605)
chr6 (185-241)||(18843905-18843961)
chr6 (185-269)||(4174548-4174627)
chr6 (185-269)||(4230177-4230256)
chr6 (189-236)||(18397107-18397154)
chr6 (185-241)||(16828008-16828064)
chr6 (185-241)||(35011321-35011377)
chr6 (3-104)||(16374062-16374163)
chr6 (228-269)||(17858217-17858258)
chr6 (185-269)||(22846386-22846464)
chr6 (185-262)||(33540069-33540140)
chr6 (237-269)||(23219619-23219651)
chr6 (83-141)||(15006587-15006646)
chr6 (112-262)||(31469375-31469517)
chr6 (1-39)||(16131327-16131365)
chr6 (185-217)||(941001-941033)
chr6 (185-217)||(21621371-21621403)
chr6 (185-217)||(25917926-25917958)
chr6 (186-258)||(31163158-31163228)
chr6 (185-217)||(32896227-32896259)
[»] scaffold0090 (2 HSPs)
scaffold0090 (185-262)||(6971-7048)
scaffold0090 (230-269)||(37019-37058)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-69)||(12497-12565)
[»] scaffold0191 (1 HSPs)
scaffold0191 (185-241)||(688-744)
[»] scaffold0205 (2 HSPs)
scaffold0205 (1-136)||(4545-4679)
scaffold0205 (229-269)||(4761-4801)
[»] scaffold0622 (1 HSPs)
scaffold0622 (185-241)||(7384-7440)
[»] scaffold0028 (1 HSPs)
scaffold0028 (185-241)||(91023-91079)
[»] scaffold0023 (3 HSPs)
scaffold0023 (185-241)||(86154-86210)
scaffold0023 (185-262)||(53344-53420)
scaffold0023 (189-262)||(58537-58609)
[»] scaffold0005 (2 HSPs)
scaffold0005 (185-269)||(247627-247710)
scaffold0005 (1-46)||(247854-247898)
[»] scaffold0004 (3 HSPs)
scaffold0004 (83-269)||(25721-25900)
scaffold0004 (185-241)||(331026-331082)
scaffold0004 (83-269)||(84588-84756)
[»] scaffold0231 (1 HSPs)
scaffold0231 (186-269)||(15172-15254)
[»] scaffold0133 (1 HSPs)
scaffold0133 (112-262)||(3543-3685)
[»] scaffold0112 (1 HSPs)
scaffold0112 (64-155)||(11964-12057)
[»] scaffold0833 (1 HSPs)
scaffold0833 (185-262)||(5341-5417)
[»] scaffold0468 (1 HSPs)
scaffold0468 (157-269)||(13217-13323)
[»] scaffold0034 (1 HSPs)
scaffold0034 (188-241)||(77540-77593)
[»] scaffold0808 (1 HSPs)
scaffold0808 (185-269)||(5595-5678)
[»] scaffold0357 (1 HSPs)
scaffold0357 (111-262)||(5923-6066)
[»] scaffold0342 (1 HSPs)
scaffold0342 (185-241)||(2663-2719)
[»] scaffold0292 (1 HSPs)
scaffold0292 (185-241)||(17674-17730)
[»] scaffold0171 (1 HSPs)
scaffold0171 (185-241)||(30977-31033)
[»] scaffold0116 (1 HSPs)
scaffold0116 (185-241)||(27889-27945)
[»] scaffold0051 (1 HSPs)
scaffold0051 (185-241)||(56145-56201)
[»] scaffold0039 (1 HSPs)
scaffold0039 (185-241)||(21349-21405)
[»] scaffold0003 (1 HSPs)
scaffold0003 (185-241)||(5160-5216)
[»] scaffold0315 (1 HSPs)
scaffold0315 (187-241)||(16711-16765)
[»] scaffold0158 (2 HSPs)
scaffold0158 (187-241)||(16317-16371)
scaffold0158 (187-241)||(22981-23035)
[»] scaffold0049 (1 HSPs)
scaffold0049 (185-267)||(30589-30670)
[»] scaffold1486 (1 HSPs)
scaffold1486 (185-262)||(1002-1078)
[»] scaffold0130 (2 HSPs)
scaffold0130 (185-262)||(13114-13190)
scaffold0130 (185-241)||(31059-31115)
[»] scaffold0001 (2 HSPs)
scaffold0001 (185-262)||(166400-166476)
scaffold0001 (185-230)||(166969-167014)
[»] scaffold0447 (1 HSPs)
scaffold0447 (185-241)||(2414-2470)
[»] scaffold0383 (2 HSPs)
scaffold0383 (185-241)||(267-323)
scaffold0383 (185-241)||(5278-5334)
[»] scaffold0335 (1 HSPs)
scaffold0335 (185-241)||(10127-10183)
[»] scaffold0269 (2 HSPs)
scaffold0269 (185-241)||(220-276)
scaffold0269 (185-236)||(2995-3046)
[»] scaffold0226 (1 HSPs)
scaffold0226 (185-241)||(15244-15300)
[»] scaffold0044 (1 HSPs)
scaffold0044 (185-241)||(94206-94262)
[»] scaffold0026 (1 HSPs)
scaffold0026 (185-237)||(27107-27159)
[»] scaffold1923 (1 HSPs)
scaffold1923 (187-262)||(646-720)
[»] scaffold0148 (1 HSPs)
scaffold0148 (112-262)||(36093-36235)
[»] scaffold0057 (1 HSPs)
scaffold0057 (79-269)||(4101-4288)
[»] scaffold0219 (1 HSPs)
scaffold0219 (111-262)||(25805-25947)
[»] scaffold0183 (1 HSPs)
scaffold0183 (197-262)||(8645-8709)
[»] scaffold0529 (1 HSPs)
scaffold0529 (185-241)||(743-799)
[»] scaffold0483 (1 HSPs)
scaffold0483 (185-241)||(4836-4892)
[»] scaffold0384 (1 HSPs)
scaffold0384 (185-241)||(453-509)
[»] scaffold0138 (3 HSPs)
scaffold0138 (185-241)||(26390-26446)
scaffold0138 (183-217)||(18894-18928)
scaffold0138 (185-217)||(24303-24335)
[»] scaffold0109 (1 HSPs)
scaffold0109 (185-241)||(49676-49732)
[»] scaffold0077 (1 HSPs)
scaffold0077 (185-241)||(24580-24636)
[»] scaffold0092 (2 HSPs)
scaffold0092 (185-232)||(13103-13150)
scaffold0092 (185-217)||(1598-1630)
[»] scaffold0010 (1 HSPs)
scaffold0010 (185-269)||(29369-29447)
[»] scaffold0597 (1 HSPs)
scaffold0597 (185-241)||(3088-3144)
[»] scaffold0258 (2 HSPs)
scaffold0258 (1-107)||(8339-8447)
scaffold0258 (185-261)||(8521-8596)
[»] scaffold0020 (1 HSPs)
scaffold0020 (112-262)||(104151-104293)
[»] scaffold0347 (1 HSPs)
scaffold0347 (185-262)||(3603-3678)
[»] scaffold0174 (1 HSPs)
scaffold0174 (228-269)||(22408-22449)
[»] scaffold0165 (1 HSPs)
scaffold0165 (183-262)||(20385-20459)
[»] scaffold0442 (1 HSPs)
scaffold0442 (149-217)||(1851-1917)
[»] scaffold0253 (1 HSPs)
scaffold0253 (192-236)||(4014-4058)
[»] scaffold0031 (1 HSPs)
scaffold0031 (185-268)||(99023-99100)
[»] scaffold0222 (1 HSPs)
scaffold0222 (185-220)||(28521-28556)
[»] scaffold0132 (1 HSPs)
scaffold0132 (185-216)||(40924-40955)
[»] scaffold1068 (1 HSPs)
scaffold1068 (185-262)||(1514-1585)
[»] scaffold0700 (1 HSPs)
scaffold0700 (184-217)||(853-886)
[»] scaffold0521 (1 HSPs)
scaffold0521 (184-217)||(6836-6869)
[»] scaffold0032 (1 HSPs)
scaffold0032 (185-262)||(110200-110276)
[»] scaffold0022 (2 HSPs)
scaffold0022 (184-217)||(114173-114206)
scaffold0022 (184-217)||(130146-130179)
[»] scaffold0786 (1 HSPs)
scaffold0786 (185-217)||(5009-5041)
[»] scaffold0507 (1 HSPs)
scaffold0507 (185-217)||(5278-5310)
[»] scaffold0503 (1 HSPs)
scaffold0503 (185-217)||(9629-9661)
[»] scaffold0434 (1 HSPs)
scaffold0434 (185-217)||(2852-2884)
[»] scaffold0390 (1 HSPs)
scaffold0390 (185-217)||(3542-3574)
[»] scaffold0338 (1 HSPs)
scaffold0338 (185-217)||(6927-6959)
[»] scaffold0151 (1 HSPs)
scaffold0151 (185-217)||(31523-31555)
[»] scaffold0125 (1 HSPs)
scaffold0125 (185-241)||(29577-29633)
[»] scaffold0121 (1 HSPs)
scaffold0121 (185-217)||(7244-7276)
[»] scaffold0102 (1 HSPs)
scaffold0102 (185-217)||(45841-45873)
[»] scaffold0080 (1 HSPs)
scaffold0080 (185-217)||(25487-25519)
[»] scaffold0068 (1 HSPs)
scaffold0068 (185-217)||(59810-59842)
[»] scaffold0021 (1 HSPs)
scaffold0021 (184-216)||(76532-76564)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 5373218 - 5372950
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  5373218 atataaattctccaaatcccaacatatgggtaaaatctccataataaataaattcaacaaagacataaagactaacgtcctaatcagagcctaatctaag 5373119  T
Q  101 actccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccat 199  Q
    |||||||||||||||||| |||| ||| | ||||||| |||| | |||||||||||||||||||||||||||||||  | ||   ||||||||||| |||    
T  5373118 actccaagaaacgataacagagattagcttccgctatccaagcaatcatcaagcaactcaccaaaagcaaactagtcatgcacgccgtctacccattcat 5373019  T
Q  200 acagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||| | ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  5373018 acaaacaggtaggcggtccatcacatatctact-ggggtaagcttcacatcaatcataatcaacataaac 5372950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 12136385 - 12136124
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  12136385 atataaattctccaagtaccgacatgtgggtaaaatctcaataataaataaatccaacaaagacataa-gaccaacatcctaatcagagcctaatctaag 12136287  T
Q  101 actccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccata 200  Q
    ||||||||| |||||||||||||||| | ||||||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||||||||||    
T  12136286 actccaagatacgataacggagatagcttccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctgcacttcgtctacccatccata 12136187  T
Q  201 cagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||| |||||||||||| |      | ||| ||| ||||| ||||||||||||||||||||||||||||    
T  12136186 cagacaggtaggcggtcga------aaccattggtggtaaccttcacatcaatcataatcaacataaac 12136124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 12732271 - 12732409
Alignment:
Q  5 aaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagact 103  Q
    |||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  12732271 aaattctccaaatttcgacatacgtgtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaaatctaggact 12732370  T
Q  104 ccaagaaacgataacggaga-taggtcccgctattcaag 141  Q
    |||||||| ||||||||||| ||| ||||||||| ||||    
T  12732371 ccaagaaatgataacggagattagctcccgctatccaag 12732409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 19083041 - 19082906
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaa 99  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||| || | ||||||||||  || ||||||||||||||||||||||    
T  19083041 atataaaatctccaaatcccgacatatgcgtaaaatctcaacaacataataaatccagcata-acataaagactgacatcctaatcagagcctaatctaa 19082943  T
Q  100 gactccaagaaacga-taacggagataggtcccgctat 136  Q
    |||||||| |||||| |||||||||||| |||||||||    
T  19082942 gactccaa-aaacgaataacggagatagctcccgctat 19082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 41919253 - 41919073
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||| |||| | ||| ||  |||||||||||||||||| || | || ||    
T  41919253 atcagagcctaccctaagactcaaaggaaacaataacggagatagctcccgctatccaagcaatcaccagacaactcaccaaaagcaaattaatcctgca 41919154  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     ||||||||| |||||||||||| |||||||||||      || | ||||| ||||||||||| |||||||||| |||||||||||||    
T  41919153 cttcgtctactcatccatacagacaggtaggcggt------caaaaccact-ggggtaagctttacatcaatcaaaatcaacataaac 41919073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 13596021 - 13595908
Alignment:
Q  96 ctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 194  Q
    ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||||    
T  13596021 ctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctacacttcgtctaccca 13595922  T
Q  195 tccatacagatagg 208  Q
    ||||||||| ||||    
T  13595921 tccatacaggtagg 13595908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 14569666 - 14569749
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||| ||||    
T  14569666 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaacaaaaac 14569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 55378825 - 55378769
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55378825 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 55378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 15116209 - 15116127
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||||||| |||||||||||| | | |||| |||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  15116209 cgtctacacatccatacagacatgcaggcagtccatcacagatccactgggggtaagtattacatcaatcataatcaacataa 15116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 43283354 - 43283273
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  | ||||| ||||||||| ||||||    
T  43283354 cgtctacccatccatacagacaggtaggcggtccatcacagatctactgggggtaagtattacatc-atcataatccacataa 43283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 8372546 - 8372602
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  8372546 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 8372602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 15216141 - 15216069
Alignment:
Q  197 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| | |||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  15216141 catacaaacaggtaggcagtccatcacagatccactaggtgtaagcttcacatcaatcataatcaacgtaaac 15216069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 15274724 - 15274668
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15274724 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 15274668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18246117 - 18246173
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18246117 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 26678118 - 26678174
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  26678118 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 26678174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 10642313 - 10642369
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  10642313 cgtctacccatccatacagataggcaggtggtccatcacagatccactaggggtaag 10642369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18166813 - 18166869
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  18166813 cgtctacccatccatacagataggcaggcggtccataacaaatccactgggggtaag 18166869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19699667 - 19699611
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  19699667 cgtctacccatccatacagataggcaggcggtccataacagatccattgggggtaag 19699611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19710252 - 19710196
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  19710252 cgtctacccatccatacagataggcaggcggtccataacagatccattgggggtaag 19710196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 19998456 - 19998512
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19998456 cgtctactcatccatacagataggcaggcggtccataacagatccactgggggtaag 19998512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 34393324 - 34393380
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  34393324 cgtctacccatccatacagacaggtaggcggtccatcatagatccactggaggtaag 34393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 262
Target Start/End: Original strand, 19557499 - 19557671
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| ||||| |||||||||||| || |||||| |||| | ||| ||||||||||| ||||| | ||||| | || ||    
T  19557499 atcagagcctatcctaagactctaaggaaacggtaacggagatagctctcgctatccaaggaatcaccaagcaactcatcaaaaac-aactaatcctgca 19557597  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     |||||||| |||||||||| || |||||||||||      || | ||||| ||||||||||| ||||||| |||||||||    
T  19557598 cttcgtcta-ccatccatactgacaggtaggcggt------caaaaccactaggggtaagctttacatcaaacataatcaa 19557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 50224105 - 50223992
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||| ||||||||||||| ||| |  | || |||||||||||||||||||||| |||||||||||      || | ||||| ||||||||||| |||    
T  50224105 caagcaattcaccaaaagcaa-ctaatcgtgcacttcgtctacccatccatacagacaggtaggcggt------caaaaccactaggggtaagctttaca 50224013  T
Q  249 tcaatcataatcaacataaac 269  Q
    |||||||||||| ||||||||    
T  50224012 tcaatcataatccacataaac 50223992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 54366025 - 54365911
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    |||||||||||||||||||||| || | || || ||||||||||||| |||||| | ||||| || ||| |      | ||||| |||||||||||||||    
T  54366025 caagcaactcaccaaaagcaaattaatcctgcacttcgtctacccattcatacaaacaggtatgctgtcaa------aaccacttggggtaagcttcaca 54365932  T
Q  249 tcaatcataatcaacataaac 269  Q
    ||| |||||||||||||||||    
T  54365931 tcattcataatcaacataaac 54365911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 7134565 - 7134513
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 237  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  7134565 cgtctacccatccatacagataggcaggcggtccataacatatccactggggg 7134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 9293651 - 9293707
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||    
T  9293651 cgtctacccatccatacagataggcaggtggtccattacagatccacttggggtaag 9293707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 15211454 - 15211510
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||    
T  15211454 cgtctacccatccatacagataagcaggcggtccagcacagatccactaggggtaag 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 17150309 - 17150253
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  17150309 cgtctactcatccatacaaataggcaggcggtccataacagatccactgggggtaag 17150253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 38763040 - 38763112
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||||||||||||| |||||||||||| |      | ||||||||||||||||| |||||||||||||||||    
T  38763040 tcgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaa 38763112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 268
Target Start/End: Complemental strand, 10239446 - 10239268
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||  |||| ||||  ||| | ||| ||||||||||||| |||||  |||| |  | ||    
T  10239446 atcagagcctatcctaagactctaaggaaacgataacggagataactccctctatctaagcaatcaccaagcaactcacc-aaagc-gactaatcttgca 10239349  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
     |||||||||||||||||| ||| ||||||| |||      || | ||||| ||||||||||| ||| ||||||||||| |||||||    
T  10239348 cttcgtctacccatccatatagacaggtaggtggt------caaaaccactaggggtaagctttacaacaatcataatccacataaa 10239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 24237195 - 24237233
Alignment:
Q  230 actgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24237195 actgggggttagcttcacatcaatcataatcaacataaa 24237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 9650118 - 9650182
Alignment:
Q  197 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||| ||| |||||||||||| |||||| ||| ||||||| ||||| |||||||||||||||||    
T  9650118 catacaaatatgtaggcggtccaccacaga-ccattgggggttagcttgacatcaatcataatcaa 9650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 16520740 - 16520796
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| |  | || ||| ||||||||||||||||||||    
T  16520740 cgtctacccatccatacagataggcatacagttcataacagatccactgggggtaag 16520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 17378136 - 17378031
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||| ||||||||||| | |  || |||||||||||||  ||||| | |||||||||||      || | | |||||||||||| ||||||    
T  17378136 caagcaactcaccgaaagcaaactaatcccgcacttcgtctacccattgatacaaacaggtaggcggt------caaaactactgggggtaagtttcaca 17378043  T
Q  249 tcaatcataatc 260  Q
    ||||||||||||    
T  17378042 tcaatcataatc 17378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22356677 - 22356621
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  22356677 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 22356621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 37958953 - 37958921
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||||||||||||||||    
T  37958953 cgtctacccatccatacagataggtaggcggtc 37958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 47470282 - 47470167
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccact--gggggtaagcttca 246  Q
    ||||||||||||||||||||| ||| |  | || |||||||||||||||||||||| | ||||| |||| |      | |||||  |||||||||||| |    
T  47470282 caagcaactcaccaaaagcaa-ctaatcatgcacttcgtctacccatccatacagacaagtaggtggtcaa------aaccactaggggggtaagcttta 47470190  T
Q  247 catcaatcataatcaacataaac 269  Q
    |||||||||||||| ||||||||    
T  47470189 catcaatcataatccacataaac 47470167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 5407412 - 5407484
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||| |||||||||||| || ||||||||| |      | ||||||||||||||||| |||||||||||||||||    
T  5407412 tcgtctactcatccatacagacagataggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaa 5407484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 15216245 - 15216191
Alignment:
Q  83 atcagagccta-atctaagactccaagaaacgataacggagataggtcccgctat 136  Q
    ||||||||||| |||||||||||||||||  ||||||| |||||| |||||||||    
T  15216245 atcagagcctacatctaagactccaagaagagataacgaagatagctcccgctat 15216191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14569478 - 14569522
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||    
T  14569478 atataaaatctccaaatccc-acatatgggcaaaatctcaataaca 14569522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 19623914 - 19623873
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  19623914 ccactaggggttagcttcacataaatcataatcaacataaac 19623873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19624134 - 19624090
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  19624134 atataaaatctccaaatcccgacatat-ggtaaaatctccataaca 19624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 24237077 - 24237137
Alignment:
Q  83 atcagagcctaatctaagactc--caagaaacgataacggagataggtcccgctattcaag 141  Q
    ||||||||||| ||||||||||  ||  |||||||||||||||||| ||||||||| ||||    
T  24237077 atcagagcctactctaagactcagcagaaaacgataacggagatagctcccgctatccaag 24237137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 42707007 - 42707048
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||| | ||||||||||||||| ||||||||    
T  42707007 ccactgggggtaagcattacatcaatcataatccacataaac 42707048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 7187837 - 7187805
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  7187837 cgtctacccatccatacagacaggtaggcggtc 7187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 7966506 - 7966474
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  7966506 cgtctacccatccatacagacaggtaggcggtc 7966474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 13449007 - 13448913
Alignment:
Q  121 agataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||| ||||||||| |||| | ||| | |||||||||||||| |||| |||   || || |||||||||||||||||||||  ||||||||||||    
T  13449007 agatagctcccgctatccaagcaatcaccgagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacaggcaggtaggcggtc 13448913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 17213740 - 17213700
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    ||||||||| | |||||||||||||||||||||| ||||||    
T  17213740 ccactggggattagcttcacatcaatcataatcaccataaa 17213700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 18496389 - 18496357
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  18496389 cgtctacccatccatacagacaggtaggcggtc 18496357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 20813945 - 20813913
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  20813945 cgtctacccatccatacagacaggtaggcggtc 20813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 21961495 - 21961463
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  21961495 cgtctacccatccatacagacaggtaggcggtc 21961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 30236466 - 30236434
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  30236466 cgtctacccatccatacagacaggtaggcggtc 30236434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 34198080 - 34198048
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  34198080 cgtctacccatccatacagacaggtaggcggtc 34198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 41167824 - 41167792
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  41167824 cgtctacccatccatacagacaggtaggcggtc 41167792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 44054113 - 44054145
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  44054113 cgtctacccatccatacagacaggtaggcggtc 44054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 20456664 - 20456395
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20456664 atataaattctccaaatcccgacatatgggtaaaatctccataataaataaatccaacaaagacataaagatcaacgtcctaatcagagcctaatctaag 20456565  T
Q  101 actccaagaaacgataacggaga-taggtcccgcta--ttcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 197  Q
    ||||||||||||||||||| ||| ||| | ||||||  | | || | |||| ||||||||||||||||||||||||||  | ||   ||||||||||| |    
T  20456564 actccaagaaacgataacgaagattagcttccgctatgtcctagcaatcattaagcaactcaccaaaagcaaactagtcatgcacgccgtctacccattc 20456465  T
Q  198 atacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| | ||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||||||    
T  20456464 atacaaacaggtaggcggtccatcacagatcta--gtgggtaagcttcacatcaatcataatcaacataaac 20456395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 16837836 - 16837584
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  16837836 atataaattctccaaatcccgacttatgggttaaatctcaataataaataaatccatcaaagacataaagaccaatgtcctaatcagagcctaaatctaa 16837737  T
Q  100 gactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    ||||||||||||| |||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || ||||||||||||||||    
T  16837736 gactccaagaaacaataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcacttcgtctacccatcca 16837649  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| ||||||| |||      || | |||||||| |||| ||| |||||||| |||||||||||||||    
T  16837648 tacagacaggtaggtggt------caaaaccactgggagtaaactttacatcaattataatcaacataaac 16837584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 14345771 - 14345487
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaa---------ga-----cataaagaccaacgtccta-atc 85  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||         ||     |||||||||  || ||||| |||    
T  14345771 atataaattcttcaagtcccgacatatgggtaaaatctcaataataaataaatccagcaaaaccaatctagaataatcataaagacagacatcctagatc 14345672  T
Q  86 agagccta-atctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagtt 184  Q
    | |||||| ||||||||||||||||||||||||||||||||| ||||||||| || | | ||| ||| ||||||||| ||||||||||| |  | ||       
T  14345671 aaagcctacatctaagactccaagaaacgataacggagatagctcccgctatccacgcaatcaccaaacaactcaccgaaagcaaactaatcttgcacgc 14345572  T
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||||||| |||||| | | ||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  14345571 tgtctacccattcatacaaacaagtaggcggtccatcacagatccatttggggtaagcttcacattaatcataatcaacataaac 14345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 11963789 - 11963950
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    |||||||||||| |||||| ||||||||| |||| | ||| ||||||||||||||||||||||||| | || ||   |||||||  |  |||||| | ||    
T  11963789 gaaacgataacgaagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctgcaccccgtctactaagtcatacaaacag 11963888  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11963889 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 11963950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 23412058 - 23412199
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||    
T  23412058 atataaattctccaaatcctgacatattggtaaaatctcaataataaataaatccaacaaagacataaagatgaacgtcctaatcatagcctaatcgaag 23412157  T
Q  101 actccaagaaacgataacggaga-taggtcccgctattcaag 141  Q
    |||||||||||| |||| ||||| ||| ||||||||| ||||    
T  23412158 actccaagaaacaataatggagattagctcccgctatccaag 23412199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 19872082 - 19872262
Alignment:
Q  83 atcagagcctaatctaagactccaa-gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| || ||||| |||| |||||||| ||||||||| |||| | ||| ||||||||||||||||||| ||||| |  | ||    
T  19872082 atcagagcctaccctaagactctaaagaaacaataatggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagc-aactaatcatgca 19872180  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||||||||||||||||||| |||||||||||      || | | ||||||||||||||| ||||||||||||||||||||||||    
T  19872181 cttcgtctacccatccatacagacaggtaggcggt------caaaacaactgggggtaagctttacatcaatcataatcaacataaac 19872262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 5453212 - 5453128
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||  | ||||||||||||||||||||||||    
T  5453212 cgtctacccatccatacagataggtaggcggttcatcacagatccatttggggtaagtattacatcaatcataatcaacataaac 5453128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 3671689 - 3671772
Alignment:
Q  186 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  | | |||||||||||| |||||||||    
T  3671689 gtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaagtattatatcaatcataattaacataaac 3671772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 24227848 - 24227771
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||| ||||||| ||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  24227848 cgtctacccatctatacagacaggtaggtggtccatcacataaacactgggggtaagcttcacatcaatcataatcaa 24227771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 3420812 - 3420666
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    ||||||||||||||||||| | ||||||| |||| | ||| ||| ||||||||| ||||| ||||| | || || |||||||||||||||||||| | ||    
T  3420812 gaaacgataacggagatagcttccgctatccaagcaatcaccaaacaactcacc-aaagc-aactaatcctgcacttcgtctacccatccatacaaacag 3420715  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||      || | ||||||||||||||||| |||||||||||||||||    
T  3420714 gtaggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 3420666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 260
Target Start/End: Original strand, 24082309 - 24082450
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| |  ||||||||||||||||||| |||| |||   || || ||| ||||||||||||||||||||||||    
T  24082309 acgataacggagatagctcccgctatccaagcaaccatcaagcaactcaccaaa-gcaa-ctaaccctgcacttcatctacccatccatacagataggta 24082406  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc 260  Q
    ||| ||      || | ||||||||||||||||| |||||||||||||||    
T  24082407 ggcagt------caaaaccactgggggtaagctttacatcaatcataatc 24082450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 10246 - 10302
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10246 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 10302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 111234 - 111178
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  111234 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 111178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 1221887 - 1221831
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  1221887 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 1221831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 9732843 - 9732787
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  9732843 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 9732787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 10780366 - 10780310
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10780366 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 10780310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11340538 - 11340594
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  11340538 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 11340594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 18780296 - 18780240
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18780296 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18780240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 25212043 - 25211987
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25212043 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 25211987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 25276195 - 25276139
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25276195 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 25276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 34937510 - 34937566
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  34937510 cgtctacccatccatacagatatgcaggcggtccatcacagatccactgggggtaag 34937566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 264
Target Start/End: Complemental strand, 23236414 - 23236240
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| |||||||||  ||| | ||| |||||||||||||||| |||| ||| |  | ||    
T  23236414 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatctaagcaatcaccaagcaactcaccaaa-gcaa-ctaatcatgca 23236317  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 264  Q
     |||||||||||||||||||||| ||||||| ||        | | ||| ||||||||||||| |||||||||||||||||||    
T  23236316 cttcgtctacccatccatacagacaggtaggtgg------ctaaaaccattgggggtaagctttacatcaatcataatcaaca 23236240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 23492175 - 23492256
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||  | ||||| ||||||||| ||||||    
T  23492175 cgtctacccagccatacagacaggtaggcggtccatcacagatccactaggggtaagtattacatc-atcataatccacataa 23492256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 17907754 - 17907830
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  | ||||||| |||||||||    
T  17907754 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaagtattacatcaa-cataatcaa 17907830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 17473953 - 17473897
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  17473953 cgtctacccatccatacagataggcaggcggtccataacagatccaatgggggtaag 17473897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22885295 - 22885239
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  22885295 cgtctacccatccatacagataggcaggtggtccataacagatccactgggggtaag 22885239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 25944811 - 25944755
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  25944811 cgtctacccatccatacagacaggttggtggtccatcacagatccactgggggtaag 25944755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 28888154 - 28888206
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 237  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  28888154 cgtctacccatccatacagacaggtatgcggtccatcacagatccactggggg 28888206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 35793406 - 35793350
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  35793406 cgtctacccatccatacagatatgcaggcggtccataacagatccactgggggtaag 35793350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 26561762 - 26561621
Alignment:
Q  113 gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtagg 212  Q
    ||||| |||||||| ||||||||| |||  | ||| |||||||||||||||| ||||  || |  | || |||||||||||||||||||||| |||||||    
T  26561762 gataatggagatagctcccgctatccaaccaatcaccaagcaactcaccaaa-gcaat-taatcatgcacttcgtctacccatccatacagacaggtagg 26561665  T
Q  213 cggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||      || |||||||| |||||||||| |||||||||||||||||    
T  26561664 cggt------caaatccactgagggtaagctttacatcaatcataatcaa 26561621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11579861 - 11579917
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||    
T  11579861 cgtctacccatccatacagacaggcaggcggtccatcactgatccactaggggtaag 11579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 29192918 - 29192862
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||    
T  29192918 cgtctacccatccatacagataggcaggcggtccataacagatccagtgtgggtaag 29192862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 23412254 - 23412293
Alignment:
Q  230 actgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  23412254 actggggttaagcttcacatcaatcataatcaacataaac 23412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 33628246 - 33628143
Alignment:
Q  114 ataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggc 213  Q
    ||||||||||||  ||||||||| |||| | ||| ||| ||| ||||||||| ||||||| | || || |||||||||||||  ||||| |||||||| |    
T  33628246 ataacggagataactcccgctatccaagcaatcaccaaacaattcaccaaaaacaaactaatcctgcacttcgtctacccatttatacaaataggtagac 33628147  T
Q  214 ggtc 217  Q
    ||||    
T  33628146 ggtc 33628143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 6454900 - 6455004
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| |||| |||| |||| |  || |||||||||||||||| |||| |||   || || | |||||||||||||||||||| |||||    
T  6454900 acgataacggagatagctcccactatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcactccgtctacccatccatacagacaggta 6454997  T
Q  211 ggcggtc 217  Q
    |||||||    
T  6454998 ggcggtc 6455004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37985912 - 37985957
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||    
T  37985912 atataaaatctccaaatcccgacatatgggaaaaatctcaagaaca 37985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 43445962 - 43445906
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  43445962 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 43445906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 431044 - 431095
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||| ||||||| ||| | ||||||||||||||||| |||||||||||    
T  431044 cgtctacctatccatatagacaagtaggcggtccatcacatatccactgggg 431095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 37190021 - 37189945
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||||  | ||||||||||||||| ||||||    
T  37190021 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagtattacatcaatcataatccacataa 37189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 11765719 - 11765666
Alignment:
Q  83 atcagagcctaatctaagactccaagaaacgataacggagataggtcccgctat 136  Q
    ||||||||||| ||||| |||||||  | ||||||||||||||| |||||||||    
T  11765719 atcagagcctactctaaaactccaaagaccgataacggagatagctcccgctat 11765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 19497875 - 19497931
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| || ||||||||  | ||||||||||||  ||||||||||||||||||||    
T  19497875 cgtctactcacccatacaggcaagtaggcggtccaaaacagatccactgggggtaag 19497931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 20710717 - 20710749
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  20710717 cgtctacccatccatacagacaggtaggcggtc 20710749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 21392377 - 21392409
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  21392377 cgtctacccatccatacagacaggtaggcggtc 21392409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 21661647 - 21661615
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  21661647 cgtctacccatccatacagacaggtaggcggtc 21661615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 23453129 - 23453161
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  23453129 cgtctacccatccatacagacaggtaggcggtc 23453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 23460373 - 23460405
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  23460373 cgtctacccatccatacagacaggtaggcggtc 23460405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 23464634 - 23464666
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  23464634 cgtctacccatccatacagacaggtaggcggtc 23464666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 269
Target Start/End: Original strand, 22311131 - 22311398
Alignment:
Q  4 taaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagac 102  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  22311131 taaattctccaaatcccgacatatgggtaaaatctcaataataaatagatccaacaaagacataaagaccaacatcctaattagagcctaaatctaagac 22311230  T
Q  103 tccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccataca 202  Q
    |||||||||||||||||||||||| ||||||||| |||| | ||| ||||||||||||| |||| |||||| |  | ||   ||||||||||| ||||||    
T  22311231 tccaagaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagaaaactaatcatgcacgccgtctacccattcataca 22311330  T
Q  203 gataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatcaacataaac 269  Q
     | |||||| |||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  22311331 aacaggtagccggttcatcacagatccactcgggggtaagctttacattaatcataatcaacataaac 22311398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 22319708 - 22319964
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||| |    
T  22319708 atataaattctctaaatcccgacatatgggtaaaatctcaataataaatagatccgacaaagacataaagaccaacgtcctaatcagagcctaaatctta 22319807  T
Q  100 gactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccat 199  Q
    ||||||||||||||||||||||||||| ||||||||| ||||       |||     ||| | ||||||||||| | || ||   ||||||||||| |||    
T  22319808 gactccaagaaacgataacggagatagctcccgctatccaag-------caa-----tcagcgaaagcaaactaatcctgcacgccgtctacccattcat 22319895  T
Q  200 acagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    | | | |||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  22319896 ataaacaggtaggcgg-ccatcatagatccactgggggtaagttttacatcaatcataatcaacataaac 22319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 19334042 - 19333855
Alignment:
Q  83 atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| | ||| ||||||||||||| ||||||||||| | || ||    
T  19334042 atcagagcctaaatctaagactccaagaaacgataatggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaaactaatcctgca 19333943  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  19333942 cttcgtctacccatccatacagacaggtaggcgatccatcacagatccactaggggtaaacttcatatcaatcataatcaacataaac 19333855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 45561710 - 45561530
Alignment:
Q  83 atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||   ||| |||||||||||||||||||||| || | || ||    
T  45561710 atcagagcctaaatctaagactccaagaaacgataacagagatagctcccgctatccaagcgatcaccaagcaactcaccaaaagcaaattaatcctgca 45561611  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  45561610 cttcgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaagcttcgcattaatcataatcaa 45561530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 268
Target Start/End: Original strand, 17264666 - 17264852
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | |||||||| ||||||||||||||||||||||  |  |    
T  17264666 atcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatcatcaagaaactcaccaaaagcaaactagtcatgta 17264765  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
     || |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17264766 ctttgtctactcatccatacagacaggtaggcggtccatcacagatccactggaggtaagcttcacatcaatcataatcaacataaa 17264852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16000252 - 16000374
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    |||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16000252 atataaattctctaaatcctgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcctaatctaag 16000351  T
Q  101 actccaagaaacgataacggagat 124  Q
    |||||||| |||||||||||||||    
T  16000352 actccaag-aacgataacggagat 16000374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22883859 - 22883982
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  22883859 atataaagtctccaaatcccgacgcatgggtaaaatctcaataacaaataagtccaacaaaaacataaagaccgacgtcctaatcagagcctaatctaag 22883958  T
Q  101 actccaagaaacgataacggagat 124  Q
    |||| ||||||||||||| |||||    
T  22883959 actctaagaaacgataacagagat 22883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 11600145 - 11600397
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||     
T  11600145 atataaattcttcaaatcccaacatatgggtaaagtctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcctaaatctag 11600244  T
Q  100 gactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||||||||||||||||||| ||| ||| || |||||| ||||             ||||||||||||||||||| |  | || | ||||||||||| ||    
T  11600245 gactccaagaaacgataacgaagattagctctcgctatccaag------------cactcaccaaaagcaaactactcatgcactccgtctacccattca 11600332  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||| | |||||||||||      || | |||||||| ||||||||||||||||||| |||| ||||||||    
T  11600333 tacaaacaggtaggcggt------caaaaccactgggagtaagcttcacatcaatcacaatccacataaac 11600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 11542086 - 11542199
Alignment:
Q  9 tctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagactccaag 108  Q
    ||||||| |||||||| ||||| |||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  11542086 tctccaagtcccgacacatgggcaaaatctcaacaaca--taaatccaacaaatacataaataccaacgtcctaatcagagcctaatctaagactccaag 11542183  T
Q  109 aaacgataacggagat 124  Q
    ||||||||||||||||    
T  11542184 aaacgataacggagat 11542199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 25608087 - 25608254
Alignment:
Q  97 taagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatc 196  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||| | ||| ||||||   |||||||||||||||| |  | ||   |||||||||||     
T  25608087 taagactccaaaaaacgataacggagatagctcccgctatccaagcaatcaccaagca---caccaaaagcaaactaatcttgcacgccgtctacccatt 25608183  T
Q  197 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| | ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  25608184 catacaaacaggtaggcggtccatgacagatccact--gggtaagcttcacatcaatcataatcaacataaac 25608254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 23216880 - 23216999
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    |||||| |||||| ||||||||||| | || ||   ||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23216880 caagcagctcaccgaaagcaaactaatcctgcacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactgggggtaagcttcaca 23216978  T
Q  249 tcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||    
T  23216979 tcaatcataatcaacataaac 23216999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 22499309 - 22499136
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    ||||||| |||  ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||| ||||||||||||||| | || ||    
T  22499309 atcagagtctaccctaagactcaaaggaaacgataacggagatagctccctctatccaagcaatcaccaagcaactaaccaaaagcaaactaatcctgca 22499210  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     |||||||| ||||||||||||| |||||||||||       | | ||||||||||||||||| |||||||||||||||||    
T  22499209 cttcgtcta-ccatccatacagacaggtaggcggt------taaaaccactgggggtaagctttacatcaatcataatcaa 22499136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 25293794 - 25293877
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  25293794 cgtctacccatc-atacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaac 25293877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 25755783 - 25755866
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  25755783 cgtctacccatc-atacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaac 25755866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 24554580 - 24554408
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||| ||||| ||||| | || ||    
T  24554580 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcacc-aaagc-aactaatcctgca 24554483  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     |||||||||||||||||||||| ||||| |||||       | | ||||||||||||| ||| |||||||||||||||||    
T  24554482 cttcgtctacccatccatacagaaaggtaagcggt------taaaaccactgggggtaaactttacatcaatcataatcaa 24554408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 646031 - 645975
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  646031 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 645975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 20707956 - 20708089
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||| | ||| ||||||||||||||| || ||||||||| |||  | ||| ||||||||||||||||   |||||| |||| ||    
T  20707956 atcagagcctatcctaagacactaaggaaacgataacggagagagctcccgctatccaaacaatcaccaagcaactcaccaaag--aaactaattctgca 20708053  T
Q  182 gttcgtctacccatccatacagataggtaggcggtc 217  Q
     |||||||||||||||||||||| ||||||||||||    
T  20708054 cttcgtctacccatccatacagacaggtaggcggtc 20708089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 23509007 - 23509063
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23509007 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 23509063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 23879217 - 23879300
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||| |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  23879217 cgtctacccattcatacaaataggtaggcggtccaccacaaa-ccactaggggttagcttcacatcaatcataatcaacataaac 23879300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 24906121 - 24906268
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    ||||||||||||||||||| ||||||||| |||| | ||  |||||||||||||||| |||||||| | || || ||||||||||||| |||||| | ||    
T  24906121 gaaacgataacggagatagctcccgctatccaagcaatccccaagcaactcaccaaatgcaaactaatcctgcacttcgtctacccattcatacaaacag 24906220  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc 260  Q
    |||||||    |||| | | |||||||||||||| || |||||||||| ||||    
T  24906221 gtaggcg----atca-aaaaccactgggggtaagatttacatcaatcagaatc 24906268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 18120328 - 18120251
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  18120328 tcgtctaaccattcatacaaataggtaggcggtccaccacaga-ccactgggggttagcttcacatcaatcataatcaa 18120251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 831766 - 831710
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  831766 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgngggtaag 831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 3433779 - 3433723
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3433779 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 3433723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 17343419 - 17343475
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  17343419 cgtctacccatccatacagataggcaggcggtccattacagatccactgggggtaag 17343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18610367 - 18610423
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18610367 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18610423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 24108718 - 24108662
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  24108718 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 24108662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 24931069 - 24931013
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  24931069 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 24931013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 28835919 - 28835975
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  28835919 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 28835975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 33170419 - 33170599
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    ||||||| |||  ||||||||| ||| |||| |||| |||||||| ||||| ||| |||| | ||| ||||||||||||||||||| || || | || ||    
T  33170419 atcagagtctaccctaagactctaaggaaacaataatggagatagctcccgatatccaagcaatcaccaagcaactcaccaaaagc-aattaatcctgca 33170517  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||||||||||||||||||| | |||||||||      || | ||||| || |||||||| ||||||||||||||| ||||||||    
T  33170518 cttcgtctacccatccatacagacaagtaggcggt------caaaaccacttggcgtaagctttacatcaatcataatccacataaac 33170599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 41509183 - 41509127
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41509183 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgagggtaag 41509127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 269890 - 269941
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  269890 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggg 269941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 22008606 - 22008553
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaa 240  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22008606 tctacccatccatacagataggcaggcggtccataacagatccactgggggtaa 22008553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 24719575 - 24719518
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactg-ggggtaag 241  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  24719575 cgtctacccatccatacagataggcaggcggtccatcacagatccactgaggggtaag 24719518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 6776483 - 6776427
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  6776483 cgtctacccatccatatagataggcaggcggtccataacagatccactgggggtaag 6776427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 13664804 - 13664748
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13664804 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaag 13664748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 13724079 - 13724023
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13724079 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaag 13724023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 16043306 - 16043250
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  16043306 cgtctacccatccatacagataggcaggcggtccatcacaaatccactcggggtaag 16043250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22909596 - 22909540
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  22909596 cgtctacccatccatacagataggcagacggtccataacagatccactgggggtaag 22909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 16041630 - 16041574
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  16041630 cgtctacccatccatacagataggcaggcggtccattacatatccacttggggtaag 16041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 17500109 - 17500181
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 261  Q
    ||||||||||||||||||||||||||||||||||      || | ||||||||||||||||| ||||||| ||||||||    
T  17500109 ttcgtctacccatccatacagataggtaggcggt------caaaaccactgggggtaagctttacatcaaacataatca 17500181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 18263321 - 18263246
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 264  Q
    |||||||||||||||||||||| |||||||||||      || | ||||||||||||||||  |||||||||||||||||||    
T  18263321 ttcgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagctatacatcaatcataatcaaca 18263246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 23350457 - 23350491
Alignment:
Q  232 tgggggtaagcttcacatcaatcataatcaacata 266  Q
    |||||||||||||||||||||||||||||||||||    
T  23350457 tgggggtaagcttcacatcaatcataatcaacata 23350491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 22884069 - 22884110
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  22884069 ccactaggggttagcttcacatcaatcataatcaacataaac 22884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 23118789 - 23118676
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||||||||| ||||| | || || ||||||||| ||||||||| || | |||||||||      || | |||||||||||||  || |||    
T  23118789 caagcaactcaccaaaagc-aactaatcctgcacttcgtctactcatccatacggacaagtaggcggt------caaaaccactgggggtaacttttaca 23118697  T
Q  249 tcaatcataatcaacataaac 269  Q
    |||||||||||| ||||||||    
T  23118696 tcaatcataatccacataaac 23118676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 24237327 - 24237364
Alignment:
Q  232 tgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24237327 tgggggtaagattcacatcaatcataatcaacataaac 24237364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 38531826 - 38531859
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||||||||||||||||    
T  38531826 tcgtctacccatccatacagataggtaggcggtc 38531859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 23631234 - 23631178
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||| ||||| ||||| ||||  ||||||||||| ||||||||    
T  23631234 cgtctacccatccatacaaataggcaggcgatccaaaacagatccactaggggtaag 23631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 23350327 - 23350401
Alignment:
Q  82 aatcagagcctaatctaagactcca-agaaacgataacggagataggtcccgctattcaagtagtcatcaagcaa 155  Q
    |||||||||||| |||||||||| | |||||||||||||||||||| | ||| ||| |||| | ||| |||||||    
T  23350327 aatcagagcctactctaagactcaacagaaacgataacggagatagcttccgttatccaagcactcaccaagcaa 23350401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 15931626 - 15931667
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||| | ||||||||||||||| ||||||||    
T  15931626 ccactgggggtaagcattacatcaatcataatccacataaac 15931667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 21200064 - 21200031
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  21200064 tcgtctacccatccatacagacaggtaggcggtc 21200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 23835490 - 23835519
Alignment:
Q  185 cgtctacccatccatacagataggtaggcg 214  Q
    ||||||||||||||||||||||||||||||    
T  23835490 cgtctacccatccatacagataggtaggcg 23835519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 11542213 - 11542273
Alignment:
Q  157 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||| |  | || || ||||||||||||||| ||| ||||||||||||    
T  11542213 tcaccaaaagcaaactaatcatgcactttgtctacccatccatagagacaggtaggcggtc 11542273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 20655998 - 20655966
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  20655998 cgtctacccatccatacagacaggtaggcggtc 20655966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 21679379 - 21679411
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  21679379 cgtctacccatccatacagacaggtaggcggtc 21679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 25120690 - 25120722
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  25120690 cgtctacccatccatacagacaggtaggcggtc 25120722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 4 - 269
Target Start/End: Original strand, 10359 - 10613
Alignment:
Q  4 taaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagact 103  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10359 taaattctccaaatcccaacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcctaatcagagcctaatctaagact 10458  T
Q  104 ccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccataca 202  Q
    ||||||||||||||| |||| ||| ||||||||| ||||             |||||||||||||| |||| | || || | ||||||||||| ||||||    
T  10459 ccaagaaacgataacagagattagctcccgctatccaag------------cactcaccaaaagcatactactcctgcactccgtctacccattcataca 10546  T
Q  203 gataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10547 aacaggtaggcggttcatcacagatccactgggggtaagtttcacatcaatcataatcaacataaac 10613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 8602377 - 8602625
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  8602377 atataaattctccaagtcccgacatatgggtaaaatctcaataataa-taaatccgacaaagacataaagaccaacgtcctaatcagagcctaaatctaa 8602475  T
Q  100 gactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccat 199  Q
    ||||||||||||||||||||||||||| |||||||||  ||         |||||| |||||  ||||| |||| | || || |||||||||||||||||    
T  8602476 gactccaagaaacgataacggagatagctcccgctat--aa---------aagcaa-tcacc--aagcagactaatcctgcacttcgtctacccatccat 8602561  T
Q  200 acagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| |||||| ||||      || | ||||||||||||||||| ||||||||||||||||||||||||    
T  8602562 acagacaggtagacggt------caaaaccactgggggtaagctttacatcaatcataatcaacataaac 8602625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 10902551 - 10902803
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | | |||| || |||||||    
T  10902551 atataaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcccagttagagtctaaatctaa 10902650  T
Q  100 gactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||| ||||||||||||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || | ||||||||||| ||    
T  10902651 gacttcaagaaacgataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcattccgtctacccattca 10902738  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||| | |||||||||||      || | ||||||||||||||||||| ||||||||||||||||||||||    
T  10902739 tacaaacaggtaggcggt------caaaaccactgggggtaagcttcatatcaatcataatcaacataaac 10902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 38378342 - 38378216
Alignment:
Q  17 tcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagactccaagaaacgat 115  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38378342 tcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaaatctaggactccaagaaacgat 38378243  T
Q  116 aacggaga-taggtcccgctattcaag 141  Q
    |||||||| ||| ||||||||| ||||    
T  38378242 aacggagattagctcccgctatccaag 38378216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 269
Target Start/End: Complemental strand, 15551920 - 15551725
Alignment:
Q  64 cataaagaccaacgtccta-atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcacc 161  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||           |||||||||    
T  15551920 cataaagacaaacatcctagatcagagcctaaatctaagactccaagaaacgataacggagatagctcccggtatccaag-----------caactcacc 15551832  T
Q  162 aaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 261  Q
    || | ||| ||| |  | || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15551831 aacaacaa-ctaatcatacacttcgtctacccatccatacagacaggtaggcggtccatcacagatccacagggggtaagcttcacatcaatcataatca 15551733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 37918978 - 37918858
Alignment:
Q  5 aaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagact 103  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  37918978 aaattctccaagtcccgacatatgagtaaaatctcaataataaataaatttaacaaagacataaagaccaacgtcctgatcagagcctaaatctaggact 37918879  T
Q  104 ccaagaaacgataacggagat 124  Q
    |||||||||||||||||||||    
T  37918878 ccaagaaacgataacggagat 37918858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 40041656 - 40041516
Alignment:
Q  3 ataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaaga 101  Q
    ||||||||||||| ||| ||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||    
T  40041656 ataaattctccaagtcctgacatatgaataaaatctcaataataaataaatccaacaaagacaaaaagaccaacgtcctaatcagagcataaatctagga 40041557  T
Q  102 ctccaagaaacgataacggaga-taggtcccgctattcaag 141  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||    
T  40041556 ctccaagaaacgataacgaagattagctcctgctattcaag 40041516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 17760752 - 17760636
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||||||| ||||||| | || ||   ||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||||||||||    
T  17760752 caagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 17760653  T
Q  249 tcaatcataatcaacat 265  Q
    |||||||||||||||||    
T  17760652 tcaatcataatcaacat 17760636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 19062072 - 19061956
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||||||| ||||||| | || ||   ||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||||||||||    
T  19062072 caagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 19061973  T
Q  249 tcaatcataatcaacat 265  Q
    |||||||||||||||||    
T  19061972 tcaatcataatcaacat 19061956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 6817546 - 6817463
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    ||||||||||| |||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  6817546 cgtctacccattcatacaaacaggtaggcggtccatcaaagatccactaggggtaagcttcacatcaatcataatcaacataaa 6817463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 15988721 - 15988873
Alignment:
Q  109 aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatagg 208  Q
    |||||||||||||||||| |||| |||| |||| | ||| |||| |||||||| ||||||||||| | || || ||||||||||||| |||||| | |||    
T  15988721 aaacgataacggagatagctcccactatccaagcaatcaccaagaaactcaccgaaagcaaactaatcctgcacttcgtctacccattcatacaaacagg 15988820  T
Q  209 taggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||||||||      || | ||||||||||||||||| ||||||||||||||||||||||    
T  15988821 taggcggt------caaaaccactgggggtaagctttacatcaatcataatcaacataa 15988873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 5230616 - 5230435
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||| ||||| ||| |||| | ||||||||| ||||||||||||||||||| | || ||    
T  5230616 atcagagcctaccctaagactcaaaggaaacgataatggagatagctcccgttatccaagcaatcatcaagccactcaccaaaagcaaactaatcctgca 5230517  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     || |||||||| |||||||| | |||||||||||      || | |||||  |||||| ||| ||||||||||||||||||||||||    
T  5230516 ctttgtctacccttccatacaaacaggtaggcggt------caaaaccactacgggtaaactttacatcaatcataatcaacataaac 5230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 12950836 - 12950916
Alignment:
Q  189 tacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  12950836 tacccatctatacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaac 12950916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 14182416 - 14182231
Alignment:
Q  79 cctaatcagagcctaatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttc 177  Q
    |||||||||||||||||||||||||| ||  | |||||||||||| ||| ||| ||||| |||| | ||| ||||||||||||| |||| ||||||   |    
T  14182416 cctaatcagagcctaatctaagactctaaacaccgataacggagattagctcctgctatccaagcaatcaccaagcaactcaccgaaaggaaactaaccc 14182317  T
Q  178 ttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |  | ||||||||||||| |||||| | || ||||||||      || | ||| ||||||| ||||||||||||||||||||||||||||||    
T  14182316 tatacttcgtctacccattcatacaaacagataggcggt------caaaaccattgggggttagcttcacatcaatcataatcaacataaac 14182231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 264
Target Start/End: Complemental strand, 43429543 - 43429368
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||| ||||||||||||  ||||| ||| |||| | ||| ||||||||||||||||||| ||||| | ||  |    
T  43429543 atcagagcctaccctaagactctaaggaaacaataacggagatatctcccgatatccaagcaatcaccaagcaactcaccaaaagc-aactaatcctgta 43429445  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 264  Q
     |||||||||||||| ||||||| |||||| ||||      || | ||||||||||||||||| |||||||||||||||||||    
T  43429444 cttcgtctacccatctatacagacaggtagacggt------caaaaccactgggggtaagctttacatcaatcataatcaaca 43429368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 17936394 - 17936475
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  17936394 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 17936475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 6230637 - 6230494
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||||||| |||||    
T  6230637 acgataacggagatagctcccgctatccaagcaaccagcaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacagacaggta 6230540  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||      || | ||||||||||||||||| |||||||||||||||||    
T  6230539 ggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 6230494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 38813318 - 38813234
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||||| ||||||||  | ||||||||||||||||||||||||    
T  38813318 cgtctacccatacatacagacaggtaggcagtccatcatagatccactaggggtaagtattacatcaatcataatcaacataaac 38813234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 7851623 - 7851678
Alignment:
Q  186 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7851623 gtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8687940 - 8688002
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaaga 63  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8687940 atataaaatctccaaatcccgacatatgggtcaaatctcaaaaacaaataaatccaacaaaga 8688002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9039809 - 9039871
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaaga 63  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  9039809 atataaaatctccaaatcccgacatatgggtcaaatctcaaaaacaaataaatccaacaaaga 9039871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 17320583 - 17320410
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||| ||||| ||| |||||| ||||||||||| ||||  ||| |||| | ||||||||||||| | ||||| ||| ||| | || ||    
T  17320583 atcagagcctaccctaggactctaaggaaacgacaacggagatagctcccaatatccaagcaatcatcaagcaacttatcaaaaacaa-ctaatcctgca 17320485  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     |||||||||||||||||||||| |||||||||||      || | ||||||||| ||||||| |||||||||||||||||    
T  17320484 cttcgtctacccatccatacagacaggtaggcggt------caaaaccactggggttaagctttacatcaatcataatcaa 17320410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 12796662 - 12796718
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12796662 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 12796718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 14819824 - 14819681
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| | ||| |||||||||||||||| |||| |||   || || ||||||||| |||||||||||| |||||    
T  14819824 acgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctactcatccatacagacaggta 14819727  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||      || | ||||||| ||||||||| |||||||||||||||||    
T  14819726 ggcggt------caaaaccactggaggtaagctttacatcaatcataatcaa 14819681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 16818982 - 16819038
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16818982 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16819038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18908618 - 18908674
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18908618 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22272973 - 22273029
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22272973 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 22273029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 12490733 - 12490652
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  12490733 cgtctacccatccatacaaacaggtaggtggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 12490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 51160394 - 51160340
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  51160394 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 51160340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 19944744 - 19944800
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  19944744 cgtctacccatccatacagataggcaggcggtccatcacatatccactaggggtaag 19944800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 41659870 - 41659950
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||| |||||||||||| |      | ||||||||||||||||| ||||||||||||||| ||||||||    
T  41659870 ttcgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagctttacatcaatcataatccacataaac 41659950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 48419905 - 48419956
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48419905 cgtctacccatccatacagacaggtaggcggtccatcacagatccattgggg 48419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 30140925 - 30140979
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  30140925 tctacccatccatacagataggcaggcggtccataacagatccactgggtgtaag 30140979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11812740 - 11812796
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  11812740 cgtctactcatccatacagataggcaggcggtccataacagatccactaggggtaag 11812796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 9304939 - 9304888
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  9304939 cgtctacccatccgtacagataggcaggcggtccataacagatccactgggg 9304888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 11381033 - 11381102
Alignment:
Q  197 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||  | ||||| ||||||||| ||||||    
T  11381033 catacagacaggtaggcggtccatcacagatccactggaggtaagtattacatc-atcataatccacataa 11381102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 293972 - 294017
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  293972 atataaaatctccaaatcccgacatatgggtaaaatctcaacaaca 294017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 37918779 - 37918738
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  37918779 ccactgggggtaagctttacatcaatcataatcaacataaac 37918738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 20418842 - 20418978
Alignment:
Q  3 ataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtccta-atcagagcc-taatctaa 99  Q
    ||||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||| | | |  |||||||| ||  |||| ||||||||| ||  ||||    
T  20418842 ataaaatctccaaatcccgacatatgggtagaatctcaacaacataatcaatccaaaataaaagtaaagaccgacaccctacatcagagccatatactaa 20418941  T
Q  100 gactccaagaaacgataacggagataggtcccgctat 136  Q
    |||||||| ||  |||||||||| ||| |||||||||    
T  20418942 gactccaaaaacagataacggaggtagctcccgctat 20418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 33339977 - 33340033
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||||    
T  33339977 cgtctacccatccatacagataggcaggaggttcatcacatatccactggaggtaag 33340033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 38166151 - 38166203
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 237  Q
    ||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  38166151 cgtctacacatccatacagataggcaggcggtccataacaaatccactggggg 38166203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 25106211 - 25106176
Alignment:
Q  234 ggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||||||    
T  25106211 ggggtaagcttcacatcaatcataatcaacataaac 25106176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 4147671 - 4147567
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| |||||||||  ||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||| ||| |||||    
T  4147671 acgataacggagatagctcccgctatctaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatatagacaggta 4147574  T
Q  211 ggcggtc 217  Q
    |||||||    
T  4147573 ggcggtc 4147567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 4164223 - 4164119
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| |||| |||| |||| |  || |||||||||||||||| |||| |||    | || |||||||||||||||||||||| |||||    
T  4164223 acgataacggagatagttcccactatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccttgcacttcgtctacccatccatacagacaggta 4164126  T
Q  211 ggcggtc 217  Q
    |||||||    
T  4164125 ggcggtc 4164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 40041447 - 40041405
Alignment:
Q  228 ccactggggg-taagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  40041447 ccactggggggtaagcttcacatcaatcataatcaacataaac 40041405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 17391285 - 17391322
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacat 265  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17391285 ccactaggggtaagcttcacatcaatcataatcaacat 17391322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 20419021 - 20419095
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||| ||| | ||||||||||| |||||||||||    
T  20419021 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccactagggct-agcttcacatc-atcataatcaa 20419095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 31414511 - 31414474
Alignment:
Q  232 tgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  31414511 tgggggtaagctttacatcaatcataatcaacataaac 31414474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 54045765 - 54045708
Alignment:
Q  185 cgtctacccatccatacagataggtaggc-ggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || | ||||||||||| ||||||| ||||||||    
T  54045765 cgtctacccatccatacagataggcagacgggtccatcacatatccactaggggtaag 54045708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 14968127 - 14968167
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  14968127 ccactgggggttagtttcacatcaatcataatcaacataaa 14968167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 40937888 - 40937920
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||||||||||||||||    
T  40937888 cgtctacccatccatacagataggtaggcggtc 40937920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 216
Target Start/End: Original strand, 23490714 - 23490745
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggt 216  Q
    ||||||||||||||||||||||||||||||||    
T  23490714 cgtctacccatccatacagataggtaggcggt 23490745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 11636812 - 11636846
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||||||||| |||||||||||||||||    
T  11636812 ccactgggggtaagctttacatcaatcataatcaa 11636846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 11517324 - 11517291
Alignment:
Q  234 ggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||||| ||||||||||||||||||||||||||||    
T  11517324 ggggttagcttcacatcaatcataatcaacataa 11517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 6148778 - 6148746
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  6148778 cgtctacccatccatacagacaggtaggcggtc 6148746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 11330895 - 11330863
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  11330895 cgtctacccatccatacagacaggtaggcggtc 11330863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 11884138 - 11884106
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  11884138 cgtctacccatccatacagacaggtaggcggtc 11884106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 12563452 - 12563420
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  12563452 cgtctacccatccatacagacaggtaggcggtc 12563420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 14296675 - 14296707
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  14296675 cgtctacccatccatacagacaggtaggcggtc 14296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 14302302 - 14302334
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  14302302 cgtctacccatccatacagacaggtaggcggtc 14302334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 15548773 - 15548805
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  15548773 cgtctacccatccatacagacaggtaggcggtc 15548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 17098858 - 17098890
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  17098858 cgtctacccatccatacagacaggtaggcggtc 17098890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 25769479 - 25769511
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  25769479 cgtctacccatccatacagacaggtaggcggtc 25769511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 35121866 - 35121898
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  35121866 cgtctacccatccatacagacaggtaggcggtc 35121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 39654108 - 39654140
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  39654108 cgtctacccatccatacagacaggtaggcggtc 39654140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 47786790 - 47786758
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  47786790 cgtctacccatccatacagacaggtaggcggtc 47786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 53900517 - 53900485
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  53900517 cgtctacccatccatacagacaggtaggcggtc 53900485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 99042 - 98920
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  99042 atataaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 98943  T
Q  101 actccaagaaacgataacggagat 124  Q
    |||||||| |||||||||||||||    
T  98942 actccaag-aacgataacggagat 98920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 270268 - 270324
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  270268 cgtctacccatccatacagataggcaagcggtccatcacagatccactgggggtaag 270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 256667 - 256626
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  256667 ccactaggggtaagcttcacatcaatcataatcaacataaac 256626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 98833 - 98797
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaaca 264  Q
    |||| |||| |||||||||||||||||||||||||||    
T  98833 ccacaggggttaagcttcacatcaatcataatcaaca 98797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 78590 - 78389
Alignment:
Q  4 taaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagact 103  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  78590 taaattctccaaatcttgacatgtgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagacc 78491  T
Q  104 ccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccataca 202  Q
    |||||||||||||||||||| ||  | |||||||            |||||||||||||||||||||||||||  | || ||||||||||||||||||||    
T  78490 ccaagaaacgataacggagattatcttccgctat-----------ccaagcaactcaccaaaagcaaactagtcatgcacttcgtctacccatccataca 78402  T
Q  203 gataggtaggcgg 215  Q
    || ||||||||||    
T  78401 gacaggtaggcgg 78389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 20191821 - 20192073
Alignment:
Q  1 atataaattctccaaatcccgaca-tatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaa 99  Q
    |||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20191821 atataagttctccaagtcccgacaatatgggtaaaatctcaataataaataaattcaacaaagacataaagaccaacgtcctaatcagagcctaatctaa 20191920  T
Q  100 gactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||||||| ||||||||| ||||| ||| ||||||||| ||||             |||||| |||||||||||| | || || | ||||||||||| ||    
T  20191921 gactccaataaacgataatggagattagctcccgctatccaag------------cactcacaaaaagcaaactactcctacactccgtctacccattca 20192008  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||| | |||||||||||| |      | ||||||||||||||||||||||||||||| ||||||||||||    
T  20192009 tacaaacaggtaggcggtcga------aaccactgggggtaagcttcacatcaatcatgatcaacataaac 20192073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 25092931 - 25093184
Alignment:
Q  1 atataaattctccaaatcccgaca-tatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatcta 98  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  25092931 atataaattctccaaatcccgacaatatgggtaaattctcaataataaataaatccaacaaagacataatgaccaacgtcctagtcagagcctaaatcta 25093030  T
Q  99 agactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 197  Q
    ||||||||||||| ||||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || | |||||| |||| |    
T  25093031 agactccaagaaatgataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcactccgtctatccattc 25093118  T
Q  198 atacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| | |||| ||||||      || | ||||| ||||||||||||||||||||||||||||||||||||    
T  25093119 atacaaacaggttggcggt------caaaaccactaggggtaagcttcacatcaatcataatcaacataaac 25093184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 33384091 - 33384220
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||  | ||    
T  33384091 atcagagcctaccctaagactctaaggaaacgataacggagatagctcccgctatccaagcggtcatcaagcaactcaccaaaagcaaactagtcttgca 33384190  T
Q  182 gttcgtctacccatccatacagataggtag 211  Q
     |||||||||||||||||||||| ||||||    
T  33384191 cttcgtctacccatccatacagacaggtag 33384220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 20820509 - 20820776
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca--aataaatccaacaaagacataaagaccaacgtccta-atcagagcctaatct 97  Q
    ||||||| |||| |||||||||||||| || |||||||||| ||||  || ||||| |  | |  ||||||||   || ||||| |||||||||||  ||    
T  20820509 atataaaatctctaaatcccgacatattggcaaaatctcaacaacataaacaaatctagaataatcataaagatagacatcctagatcagagcctatcct 20820608  T
Q  98 aagactccaag--aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccat 195  Q
    ||||||| ||   |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||| ||||||| |||| || |||||| ||||||    
T  20820609 aagactcaaaagaaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaaacaaactaattctgcacttcgtcaacccat 20820708  T
Q  196 ccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
      ||||| | |||||||||||      || | ||||| ||||| ||||||||||||||||||||||||||||||    
T  20820709 ttatacaaacaggtaggcggt------caaaaccactaggggttagcttcacatcaatcataatcaacataaac 20820776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 40438295 - 40438121
Alignment:
Q  83 atcagagcctaatctaagactccaagaaa-cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||| ||||||||| |||  | ||| ||||||||||||||||||||||||| |  | ||    
T  40438295 atcagagcctaccctaagactctaagaaaacgataacggagatagctcccgctatccaaacaatcaccaagcaactcaccaaaagcaaactaatcatgca 40438196  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
     | ||||||||||||||||| || |||||||||||       | | ||||||||||||||||| |||||||||||||||||    
T  40438195 ctccgtctacccatccatacggacaggtaggcggt------taaaaccactgggggtaagctttacatcaatcataatcaa 40438121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 262
Target Start/End: Original strand, 52397854 - 52397997
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||| ||||||| ||||||||| |||| |  || |||||||||||||||||   |||||  ||| || |||||||||||||||||||||| ||||     
T  52397854 acgataacagagatagctcccgctatccaagcaaccaccaagcaactcaccaaaa--caactaactctgcatttcgtctacccatccatacagacaggtc 52397951  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||      || | ||||||||||||||||| |||||||||||||||||    
T  52397952 ggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 52397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 20252281 - 20252337
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20252281 cgtctacccatccatacagataggcaggcggtccatcacagatctactgggggtaag 20252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22080129 - 22080185
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  22080129 cgtctacccatccatacagaaaggtaggcggtccatcacagatccactgggcgtaag 22080185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22352224 - 22352280
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22352224 cgtctatccatccatacagaaaggtaggcggtccatcacagatccactggggctaag 22352280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 41217482 - 41217529
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccact 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41217482 cgtctacccatccatacagacaggtaggcggtccatcacagatccact 41217529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22364882 - 22364938
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||    
T  22364882 cgtctacccattcatacagataggcagacggtccatcacatatccactgggggtaag 22364938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 40555631 - 40555711
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||| |||||||||||      || | ||||| ||||||||||| ||||||||||||||| ||||||||    
T  40555631 ttcgtctacccatccatacagacaggtaggcggt------caaaaccactaggggtaagctttacatcaatcataatccacataaac 40555711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 24498501 - 24498444
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagc 242  Q
    ||||||| || |||||||| || ||||||||||||| |||||||||||||||||||||    
T  24498501 cgtctactcacccatacaggtaagtaggcggtccataacagatccactgggggtaagc 24498444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 33395168 - 33395209
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  33395168 ccactgggggtaagctttacatcaatcataatcaacataaac 33395209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 41213576 - 41213497
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||| ||||||||||||||      | ||||| ||||||||||| ||||||||||||||| | ||||||    
T  41213576 ttcgtctacccatccatacagacaggtaggcggtcca------aaccact-ggggtaagctttacatcaatcataatccagataaac 41213497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 46144067 - 46144101
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||||||||||||||    
T  46144067 ccactgggggtaagcttcacatcaatcataatcaa 46144101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 21193427 - 21193504
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||| ||||||||||||||||| |      | |||||||| |||||||| ||||||||||||||| ||||||||    
T  21193427 cgtctacccatccat-cagataggtaggcggtcaa------aaccactgggagtaagctttacatcaatcataatccacataaac 21193504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 15863569 - 15863513
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  15863569 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 15863513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5472494 - 5472461
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5472494 atataaattctccaaatcccgacaaatgggtaaa 5472461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 5770145 - 5770042
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    |||||||||||||||| |||| ||| | || || |||||||||||||||||||||| ||||||| |||      || | ||||| ||||||||||| |||    
T  5770145 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacccatccatacagacaggtaggtggt------caaaaccact-ggggtaagctttaca 5770055  T
Q  249 tcaatcataatca 261  Q
    |||||||||||||    
T  5770054 tcaatcataatca 5770042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 18164438 - 18164471
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  18164438 tcgtctacccatccatacagacaggtaggcggtc 18164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21041864 - 21041897
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  21041864 atataaattctccaaatcccgacaaatgggtaaa 21041897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 9786369 - 9786337
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  9786369 cgtctacccatccatacagacaggtaggcggtc 9786337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 21042023 - 21042082
Alignment:
Q  157 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||| ||| | || || ||||| |||||||||||||||| ||||||||||||    
T  21042023 tcaccaaaagcaa-ctaatcctgcacttcgtttacccatccatacagacaggtaggcggtc 21042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 22148296 - 22148264
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  22148296 cgtctacccatccatacagacaggtaggcggtc 22148264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 35053086 - 35053118
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  35053086 cgtctacccatccatacagacaggtaggcggtc 35053118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 36358229 - 36358197
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  36358229 cgtctacccatccatacagacaggtaggcggtc 36358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 51658311 - 51658279
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  51658311 cgtctacccatccatacagacaggtaggcggtc 51658279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 269
Target Start/End: Original strand, 25593246 - 25593496
Alignment:
Q  3 ataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaaga 101  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||    
T  25593246 ataaattctccaagtcccgacatataggtaaaatctcaataataaataaatccaacaaagacataaagaccaatgtcctaatcagagcctaaatctagga 25593345  T
Q  102 ctccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccata 200  Q
    ||||||||||||||||| |||| ||| ||| ||||| ||||             ||||||||||||||||||| | || || | ||||||||||| ||||    
T  25593346 ctccaagaaacgataacagagattagctcctgctatccaag------------cactcaccaaaagcaaactactcctacactccgtctacccattcata 25593433  T
Q  201 cagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    || | |||||||||||      || | ||||||||||||||||||||||||||||||||||||||||||    
T  25593434 caaacaggtaggcggt------caaaaccactgggggtaagcttcacatcaatcataatcaacataaac 25593496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 18533430 - 18533679
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||| |||||||||||||||||||||    
T  18533430 atataaattcttcaagtcccaacatatgggtaaaatctcaataataaataaattcaacgaagacataaataccaacgttctaatcagagcctaatctaag 18533529  T
Q  101 actccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccat 199  Q
    |||||||||| |||||||||||| ||  ||||||||| ||||       |||     |||||||||||||| || | || || |  |||||||||| |||    
T  18533530 actccaagaaccgataacggagattaactcccgctatccaag-------caa-----tcaccaaaagcaaaatactcctgcactctgtctacccattcat 18533617  T
Q  200 acagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||| | |||||||||||       | | ||||||||||||||||||||||||||||||||||||||||    
T  18533618 acaaacaggtaggcggt------taaaaccactgggggtaagcttcacatcaatcataatcaacataa 18533679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 43640530 - 43640689
Alignment:
Q  99 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||||| |||| |||||| || |||||| ||||||||| |||| |  || | |||||||||||||| |||| ||| | || ||   ||||||||||||||    
T  43640530 agactctaagacacgatagcgaagatagctcccgctatccaagcaaccaccgagcaactcaccaaa-gcaa-ctaatcctgcacaacgtctacccatcca 43640627  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  43640628 tacagataggtaggcggtccatcacagatccact--gggtaagcttcacatcaatcataatcaa 43640689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 29111926 - 29112111
Alignment:
Q  79 cctaatcagagcctaatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttc 177  Q
    ||||||||||||||||||||||| || || || |||||||||||| ||| ||| ||||| |||  | ||| ||||||||||||| ||||||||||| |      
T  29111926 cctaatcagagcctaatctaagattctaaaaaccgataacggagattagctccagctatccaaacaatcaccaagcaactcaccgaaagcaaactaatca 29112025  T
Q  178 ttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    | || ||||||||| ||| |||||| | ||| |||| ||      || | |||||||||||||||||||||||||||| |||||||||||||    
T  29112026 tgcacttcgtctacgcattcatacaaacaggcaggctgt------caaaaccactgggggtaagcttcacatcaatcacaatcaacataaac 29112111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 45620354 - 45620278
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||| |||||| |||||||||||||||| |||||| |||||| |||| |||||||||||||||||||||||    
T  45620354 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccactgagggttagcttcacatcaatcataatcaa 45620278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 3801367 - 3801311
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3801367 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 3801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 12638248 - 12638192
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12638248 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 12638192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 19435843 - 19435759
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||  | |||| |||||||||||||| ||||    
T  19435843 cgtctacccatccatatagacaggtaggcggtccatcatagatccattgggggtaagtattacataaatcataatcaacaaaaac 19435759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 19657724 - 19657807
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  19657724 cgtctacctatccatacagacaggcatgcggtccatcacagatccactgggggtaagcattacatc-atcataatccacataaac 19657807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19888981 - 19888925
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19888981 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 19888925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 42180463 - 42180407
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42180463 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 42180407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 21140078 - 21140134
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  21140078 cgtctacccatccatacagataggcagtcggtccataacagatccactgggggtaag 21140134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 24272241 - 24272394
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    |||||||||||||||||||  |||||||| |||| | ||| ||||||||||||| ||||| ||||| | || || |||||||||||||| ||||||| |     
T  24272241 gaaacgataacggagatagcacccgctatccaagcaatcaccaagcaactcacc-aaagc-aactaatcctgcacttcgtctacccatcaatacagacaa 24272338  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| ||      || | ||| | ||||||||||| ||||||||||||||| ||||||||    
T  24272339 gtaggcagt------caaaaccattaggggtaagctttacatcaatcataatccacataaac 24272394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 6092676 - 6092789
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||||||||||||||| |  | || |||||||||||||||||| ||| || ||||||||      || | ||| | ||||||||||| |||    
T  6092676 caagcaactcaccaaaagcaaactaatcatgcacttcgtctacccatccatatagacagataggcggt------caaaaccaat-ggggtaagctttaca 6092768  T
Q  249 tcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||    
T  6092769 tcaatcataatcaacataaac 6092789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 24089420 - 24089281
Alignment:
Q  99 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||||| |||| | |||| ||||||||| ||||||||| |||| |  || |||||||||||||||| |||| ||| | || ||   | ||||||||||||    
T  24089420 agactctaagacatgatagcggagatagctcccgctatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaatcctgcacaacatctacccatcca 24089323  T
Q  199 tacagataggtaggcggtccatcacagatccactgggggtaa 240  Q
    |||| | | |||||||||||||||||||||||||| ||||||    
T  24089322 tacatacatgtaggcggtccatcacagatccactgcgggtaa 24089281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 21276596 - 21276540
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||    
T  21276596 cgtctacccatccatacagataggcaggcagtccataacagatccactggggataag 21276540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 24966364 - 24966420
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  24966364 cgtctacccatccatactgataggcaggcggtccataacagatccactaggggtaag 24966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 34822254 - 34822310
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||    
T  34822254 cgtctacccatccatatagataggcaggcggtccagaacagatccactgggggtaag 34822310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 38707054 - 38706998
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  38707054 cgtctacccatccatacagataggcagacggtccataacagatccactaggggtaag 38706998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 7509910 - 7509865
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatcca 230  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  7509910 cgtctacccatccatacagataggcaggcggtccataacagatcca 7509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 20271209 - 20271243
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||||||||||||||    
T  20271209 ccactgggggtaagcttcacatcaatcataatcaa 20271243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 7319663 - 7319695
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||||||||||||||||    
T  7319663 cgtctacccatccatacagataggtaggcggtc 7319695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 24839670 - 24839704
Alignment:
Q  232 tgggggtaagcttcacatcaatcataatcaacata 266  Q
    ||||||||||||| |||||||||||||||||||||    
T  24839670 tgggggtaagctttacatcaatcataatcaacata 24839704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 24868806 - 24868877
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||| |||||||||||      || | ||||| | ||||||||| |||||||||||||||||    
T  24868806 cgtctacccatccatacagacaggtaggcggt------caaaaccactagaggtaagctttacatcaatcataatcaa 24868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 215
Target Start/End: Original strand, 25600119 - 25600149
Alignment:
Q  185 cgtctacccatccatacagataggtaggcgg 215  Q
    |||||||||||||||||||||||||||||||    
T  25600119 cgtctacccatccatacagataggtaggcgg 25600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 269374 - 269406
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  269374 cgtctacccatccatacagacaggtaggcggtc 269406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 4450226 - 4450194
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  4450226 cgtctacccatccatacagacaggtaggcggtc 4450194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 22137726 - 22137694
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  22137726 cgtctacccatccatacagacaggtaggcggtc 22137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 22581913 - 22581881
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  22581913 cgtctacccatccatacagacaggtaggcggtc 22581881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 23614525 - 23614457
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||  |||||||||| |  | || ||||||||||||| |||||| | ||||||||||||    
T  23614525 caagcaactcaccggaagcaaactaatcatgcacttcgtctacccattcatacaaaaaggtaggcggtc 23614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 24296474 - 24296442
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  24296474 cgtctacccatccatacagacaggtaggcggtc 24296442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 28972217 - 28972249
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  28972217 cgtctacccatccatacagacaggtaggcggtc 28972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 32738731 - 32738763
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  32738731 cgtctacccatccatacagacaggtaggcggtc 32738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 36892683 - 36892651
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  36892683 cgtctacccatccatacagacaggtaggcggtc 36892651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 3476 - 3353
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  3476 atataaattcttcaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcctaattagagcctaatctaag 3377  T
Q  101 actccaagaaacgataacggagat 124  Q
    |||||||| |||||||||||||||    
T  3376 actccaaggaacgataacggagat 3353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7158 - 7320
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||    
T  7158 atataaattctccaaattccgacatatggataaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcctaaatttaa 7257  T
Q  100 gactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcacca 162  Q
    |||||||| ||||||||||| |||||  ||||||||| |||| | ||| ||||||||||||||    
T  7258 gactccaaaaaacgataacgaagataactcccgctatccaagcaatcaccaagcaactcacca 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 23210 - 23048
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||    
T  23210 atataaattctccaaattctgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcaaagcctaaatttaa 23111  T
Q  100 gactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcacca 162  Q
    |||||||| ||||||||| |||||||| ||||||||| |||| | ||| ||||||||||||||    
T  23110 gactccaaaaaacgataatggagatagctcccgctatccaagcaatcaccaagcaactcacca 23048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 23046 - 22966
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||| |||||||| | |||||||||| |      | ||||||||||||||||| ||||||||||||||||||||||||    
T  23046 ttcgtctacccattcatacagacatgtaggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaacataaac 22966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18081401 - 18081277
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||     
T  18081401 atataaattctccaaatcccgacataagggtaaaatctcaataataaataaatccaacaaaaacataaagaccaacgtcctaatcagagcctaaatctag 18081302  T
Q  100 gactccaagaaacgataacggagat 124  Q
    |||||||||||||||||||||||||    
T  18081301 gactccaagaaacgataacggagat 18081277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 269
Target Start/End: Original strand, 28718124 - 28718373
Alignment:
Q  9 tctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaa-tctaagactccaa 107  Q
    |||||||| ||| ||||| ||| |||||||| |||| ||||||||| |||||| ||||||||| |||| ||||||||||||||||| |||||||||  ||    
T  28718124 tctccaaaacccaacataagggcaaaatctccataataaataaatctaacaaatacataaagatcaacttcctaatcagagcctaaatctaagacttaaa 28718223  T
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
     |||||||||||| ||||| |||  |||| ||||           ||||||||  ||||||||||| |  | ||   ||||||||||| |||||| ||||    
T  28718224 -aaacgataacggggatagctcctactatccaag-----------caactcactgaaagcaaactaatcatgcacgccgtctacccattcatacaaatag 28718311  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28718312 gtaggcggtccatcatagatccactgggggtaagcttcacattaatcataatcaacataaac 28718373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 14278841 - 14278724
Alignment:
Q  151 agcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatc 250  Q
    |||||||| |||||||||||||||| || || |||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  14278841 agcaactc-ccaaaagcaaactagtcctgcacttcgtctacccatccataaagacaggtaggtggtccatcacagatccactaggggtaagcttcacatc 14278743  T
Q  251 aatcataatcaacataaac 269  Q
    |||||||||||||||||||    
T  14278742 aatcataatcaacataaac 14278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 268
Target Start/End: Complemental strand, 21677500 - 21677344
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||| ||| |  | ||    |||||||||| |||||| | |||||    
T  21677500 acgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaa-ctaatcatgcacgcagtctacccattcatacaaacaggta 21677402  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21677401 ggcggtccattacagatccaatgggggtaagcttcacatcaatcataatcaacataaa 21677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 4482436 - 4482615
Alignment:
Q  83 atcagagcctaatctaagactccaa-gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||| ||||||  ||||||||| || ||||||||||||||||||| ||||||||| |||| | ||| ||||||||||||| ||||| ||||| | || ||    
T  4482436 atcaaagcctatcctaagactctaatgaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcacc-aaagc-aactaatcctgca 4482533  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||||||||||||||||||| |||||||||||| |      |  |||||||||||||||| ||||||||||||||||||||||||    
T  4482534 cttcgtctacccatccatacagacaggtaggcggtcga------aatcactgggggtaagctttacatcaatcataatcaacataaac 4482615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 269
Target Start/End: Complemental strand, 39294129 - 39293975
Alignment:
Q  109 aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatagg 208  Q
    |||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||| |  | || ||||||| ||||| |||||| | |||    
T  39294129 aaacgataacggagatagctcccgctatccaagcaatcatcaagcaactcaccaaaatcaaactaatcatgcacttcgtctgcccattcatacaaacagg 39294030  T
Q  209 taggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| |      || | ||||||||| ||||||||||||||||||||||||||||||||    
T  39294029 taggcgat------caaaaccactggggctaagcttcacatcaatcataatcaacataaac 39293975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15980616 - 15980350
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca--aataaatccaacaaagacataaagaccaacgtccta-atcagagcctaatct 97  Q
    ||||||| ||| ||||||||||||||||||||||||||| | ||||  ||||||| ||  | |  ||||||||   || ||||| ||||||||||| |||    
T  15980616 atataaaatcttcaaatcccgacatatgggtaaaatctccacaacataaataaattcagaataatcataaagatagacatcctagatcagagcctactct 15980517  T
Q  98 aagactccaa-gaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccat 195  Q
    ||||||| || ||| ||||||||||||| || ||||||||| |||| | ||| ||||||||||||| ||||||| ||| | || ||   |||||||||||    
T  15980516 aagactctaaagaaccgataacggagattagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaatctaatcctacaaaacgtctacccat 15980417  T
Q  196 ccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
       |||| | |||||||||||| |      | ||||||||||||||||||||||||||||| |||||||||||    
T  15980416 ttttacaaagaggtaggcggtcga------aaccactgggggtaagcttcacatcaatcattatcaacataaa 15980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 9641224 - 9641337
Alignment:
Q  96 ctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 194  Q
    ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||||    
T  9641224 ctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctacacttcgtctaccca 9641323  T
Q  195 tccatacagatagg 208  Q
    ||||||||| ||||    
T  9641324 tccatacaggtagg 9641337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 13460489 - 13460675
Alignment:
Q  79 cctaatcagagcctaatctaagactc-caagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagtt 176  Q
    |||||||| |||||||||||||||||  ||||| |||||||||||| ||| ||||||| | |||| | ||| |||| |||||||| ||||||||||| |     
T  13460489 cctaatcatagcctaatctaagactctaaagaaccgataacggagattagctcccgctgtccaaggaatcaccaagaaactcaccgaaagcaaactactc 13460588  T
Q  177 cttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    || || |  |||||||||| |||||| | |||||||||||      || | | | ||||||||||||| ||||||||||||||||||||||||    
T  13460589 ctgcactctgtctacccattcatacaaacaggtaggcggt------caaaactattgggggtaagctttacatcaatcataatcaacataaac 13460675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 4072904 - 4072821
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||| | |||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  4072904 cgtctacccattcatacaaacaggtaggcggtccaccacaga-ccactaggggttagcttcacatcaatcataatcaacataaac 4072821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 7286581 - 7286502
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  | ||||| ||||||||||||||||    
T  7286581 tctacccatccatacagatagttaggcggtccatcacagatccactaggggtaagtattacatc-atcataatcaacataa 7286502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17923058 - 17923117
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaa 60  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17923058 atataaattctccaaatcctgacatatgggtaaaatctcaataataaataaatccaacaa 17923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 7290847 - 7290903
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  7290847 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 7290903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 14253324 - 14253268
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  14253324 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 14253268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 16416448 - 16416504
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16416448 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16416504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 369083 - 369134
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  369083 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggg 369134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 9323007 - 9322894
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 248  Q
    ||||||||||||||||||||| ||| | || || |||||||||||||| ||||||| | |||||||||| |      | ||||||||||||||||| |||    
T  9323007 caagcaactcaccaaaagcaa-ctaatcctgcacttcgtctacccatcgatacagacaagtaggcggtcaa------aaccactgggggtaagctttaca 9322915  T
Q  249 tcaatcataatcaacataaac 269  Q
    |||||||||||| ||||||||    
T  9322914 tcaatcataatccacataaac 9322894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11285287 - 11285343
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11285287 cgtctactcatccatacagacaggtaggcggtccatcacaaatccactgggggtaag 11285343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 16481090 - 16481034
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  16481090 cgtctacccattcatacagataggcaggcggtccataacagatccactgggggtaag 16481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 2192859 - 2192808
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  2192859 cgtctacccatccatacagataggcaggcggtccataacagatccactgggg 2192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 12545862 - 12545815
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccact 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12545862 cgtctacccatccatacagacaggtaggcggtccatcacagatccact 12545815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17926895 - 17926954
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaa 60  Q
    ||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||||||    
T  17926895 atataaattctctgaatcccgacatatgggtaaattctcaataataaataaatccaacaa 17926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 13868141 - 13868060
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||  | ||||| ||||||||| ||||||    
T  13868141 cgtctacccatccatacagacaggtaggcaatccatcacagatccactaggggtaagtattacatc-atcataatccacataa 13868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 15305693 - 15305768
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||  ||||||||||  |||||||||||    
T  15305693 cgtctacccattcatacagataggtaggcggtccaccacaga-ccactgggggctagcttcacat-tatcataatcaa 15305768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 18305892 - 18305836
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  18305892 cgtctactcatccatacagacaggtaggcagtccatcacagatccactaggggtaag 18305836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39294254 - 39294194
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaa 61  Q
    ||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||| ||||    
T  39294254 atataaattcttcaagtaccgacatatgggtaaaatctcaataataaataaatccagcaaa 39294194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 12245941 - 12246017
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||| |||||| ||||||||||||| || |||||| ||||| ||||| ||||| |||||||||||||||||    
T  12245941 tcgtctacccattcatacaaataggtaggcggtacaccacaga-ccact-ggggttagcttgacatcaatcataatcaa 12246017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 3048007 - 3048060
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggt 238  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  3048007 cgtctacccatccatacagataggcaggccgtccataacagatccactaggggt 3048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 5617721 - 5617799
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||| |||||||||||| |      | ||||||||||||||| | ||||||||||||||| ||||||||    
T  5617721 cgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagcattacatcaatcataatccacataaac 5617799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 3193904 - 3193869
Alignment:
Q  234 ggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||||||    
T  3193904 ggggtaagcttcacatcaatcataatcaacataaac 3193869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12245763 - 12245820
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataac--aaataaatcca 56  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  12245763 atataaaatctccaaatcccgacatatgggcaaaatctccataacataaataaatcca 12245820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 14302762 - 14302693
Alignment:
Q  192 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||| |||||| |||||||||||||||| |||||| ||||||||||| | |||||||| ||||||| ||||    
T  14302762 ccattcatacaaataggtaggcggtccaccacaga-ccactgggggttaacttcacattaatcatattcaa 14302693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 14302942 - 14302845
Alignment:
Q  3 ataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaaga 101  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||| | | ||| |||      ||||||||| ||| ||||||||||| ||||||||||||    
T  14302942 ataaaatctacaaatcccgacatatgggtaaaatctcaacaacatactcaatgcaa-----tcataaagactaacatcctaatcagatcctaatctaaga 14302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16370444 - 16370399
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  16370444 atataaaatctccaaatcccgacatataggtaaaatctcaacaaca 16370399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 16915915 - 16915993
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||||  | ||||||||||||||| ||||||||    
T  16915915 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagtattacatcaatcataatccacataaac 16915993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 18921042 - 18920976
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||| |||| ||| | || || |||||||||||||||||||||| ||||||||||||    
T  18921042 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacccatccatacagacaggtaggcggtc 18920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 14938890 - 14939007
Alignment:
Q  99 agactccaagaaac-gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 197  Q
    |||||| ||||||| |||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | || ||  ||||||||||||||    
T  14938890 agactctaagaaaccgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatcctacacgtcgtctacccatcc 14938987  T
Q  198 atacagataggtaggcggtc 217  Q
    ||||||| ||||||||||||    
T  14938988 atacagacaggtaggcggtc 14939007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 15366483 - 15366600
Alignment:
Q  99 agactccaagaaac-gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 197  Q
    |||||| ||||||| |||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | || ||  ||||||||||||||    
T  15366483 agactctaagaaaccgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatcctacacgtcgtctacccatcc 15366580  T
Q  198 atacagataggtaggcggtc 217  Q
    ||||||| ||||||||||||    
T  15366581 atacagacaggtaggcggtc 15366600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 9058613 - 9058497
Alignment:
Q  99 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 198  Q
    |||||| |||| |||||| ||||||||| ||||||||| |||| |  || | ||| |||||||||| |||| ||| | || ||   ||||||||||||||    
T  9058613 agactctaagacacgatagcggagatagctcccgctatccaagcaaccaccgagccactcaccaaa-gcaa-ctaatcctgcacaacgtctacccatcca 9058516  T
Q  199 tacagataggtaggcggtc 217  Q
    |||||| ||||||||||||    
T  9058515 tacagacaggtaggcggtc 9058497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 31499504 - 31499538
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||||| ||||||||||||    
T  31499504 ttcgtctacccatccatacagacaggtaggcggtc 31499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 15628948 - 15628981
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  15628948 tcgtctacccatccatacagacaggtaggcggtc 15628981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 19065539 - 19065580
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  19065539 ccactgtgggttagcttcacatcaatcataatcatcataaac 19065580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 141815 - 141847
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  141815 cgtctacccatccatacagacaggtaggcggtc 141847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 2024634 - 2024683
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||    
T  2024634 cgtctacccatccaga--gacaggcaggcggtccatcacagatccactgggg 2024683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4073090 - 4073050
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaa 41  Q
    ||||||| |||||||||||||| |||||||||| |||||||    
T  4073090 atataaaatctccaaatcccgatatatgggtaatatctcaa 4073050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 4437141 - 4437169
Alignment:
Q  186 gtctacccatccatacagataggtaggcg 214  Q
    |||||||||||||||||||||||||||||    
T  4437141 gtctacccatccatacagataggtaggcg 4437169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 13375949 - 13375981
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  13375949 cgtctacccatccatacagacaggtaggcggtc 13375981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 13388251 - 13388283
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  13388251 cgtctacccatccatacagacaggtaggcggtc 13388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 15914326 - 15914294
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  15914326 cgtctacccatccatacagacaggtaggcggtc 15914294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 45455636 - 45455604
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  45455636 cgtctacccatccatacagacaggtaggcggtc 45455604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 49049778 - 49049746
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  49049778 cgtctacccatccatacagacaggtaggcggtc 49049746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 19412 - 19535
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  19412 atataaattctccaaatcccgacatataggtaaaatctcaataataaataaatccaac-aagacataaagatcaacgtcctaatcagagcctaaatctaa 19510  T
Q  100 gactccaagaaacgataacggagat 124  Q
    |||||||||||||||||||| ||||    
T  19511 gactccaagaaacgataacgaagat 19535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 269
Target Start/End: Original strand, 19631 - 19662
Alignment:
Q  238 taagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||    
T  19631 taagcttcacatcaatcataatcaacataaac 19662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 45682 - 45558
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaa 99  Q
    ||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||     
T  45682 atataaattcttcaagtctcgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagaacctaaatctag 45583  T
Q  100 gactccaagaaacgataacggagat 124  Q
    |||||||||||||||||||||||||    
T  45582 gactccaagaaacgataacggagat 45558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 45464 - 45432
Alignment:
Q  236 ggtaagcttcacatcaatcataatcaacataaa 268  Q
    |||||||||||||||||||||||||||||||||    
T  45464 ggtaagcttcacatcaatcataatcaacataaa 45432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 73385 - 73245
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaag 100  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  73385 atataaattctccaagtcccgacatatgggtaaaatatcaataataaataaatccaacaa-gacatcaagaccaacgtcctaatcagagcttaatctaag 73287  T
Q  101 actccaagaaacgataacggaga-taggtcccgctattcaag 141  Q
    |||| |||||||||||||| ||| ||| ||||||||| ||||    
T  73286 actcaaagaaacgataacgaagattagctcccgctatccaag 73245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 1990 - 1949
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||| | ||||||||||||||| ||||||||    
T  1990 ccactgggggtaagcattacatcaatcataatccacataaac 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4839 - 4720
Alignment:
Q  5 aaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagact 103  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  4839 aaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaac-aagacataaagaccaacgtccaaatcagagcctaaatctaggact 4741  T
Q  104 ccaagaaacgataacggagat 124  Q
    ||||||||||||||| |||||    
T  4740 ccaagaaacgataacagagat 4720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 11429 - 11560
Alignment:
Q  5 aaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagactc 104  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||| |||||||||||||||||||    
T  11429 aaatcctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagactaatg-cctaattagagcctaatctaagactc 11527  T
Q  105 caagaaacgataacggaga-taggtcccgctat 136  Q
     |||||||||||| ||||| ||| |||||||||    
T  11528 aaagaaacgataatggagattagctcccgctat 11560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 49579 - 49680
Alignment:
Q  14 aaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagactccaagaaacg 113  Q
    ||||||||||||||||||||||||||||||| ||  ||||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  49579 aaatcccgacatatgggtaaaatctcaataataaccaaatctaacaaagggaaaaagaccaacgtcttaatcagagcctaatctaagactccaagaaacg 49678  T
Q  114 at 115  Q
    ||    
T  49679 at 49680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 54110 - 54211
Alignment:
Q  14 aaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagactccaagaaacg 113  Q
    ||||||||||||||||||||||||||||||| ||  ||||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  54110 aaatcccgacatatgggtaaaatctcaataataaccaaatctaacaaagggaaaaagaccaacgtcttaatcagagcctaatctaagactccaagaaacg 54209  T
Q  114 at 115  Q
    ||    
T  54210 at 54211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 55672 - 55780
Alignment:
Q  155 actcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatc 254  Q
    ||||||||||||||||||| | || || ||||||||| ||| |||| | | |||||||||||| |      | ||||| |||||||||||||||||||||    
T  55672 actcaccaaaagcaaactactcctgcacttcgtctactcattcatagaaacaggtaggcggtcaa------aaccactaggggtaagcttcacatcaatc 55765  T
Q  255 ataatcaacataaac 269  Q
    |||||| ||||||||    
T  55766 ataatccacataaac 55780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 268
Target Start/End: Complemental strand, 17375739 - 17375555
Alignment:
Q  79 cctaatcagagcctaatctaagactccaagaaac-gataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagtt 176  Q
    |||||||| ||||||||||||||||  ||  ||| |||||||||||| || ||||||||| |||| | ||| ||||||||||||| ||||||||||| |     
T  17375739 cctaatcaaagcctaatctaagactttaaagaactgataacggagattagttcccgctatccaagcaatcaccaagcaactcaccgaaagcaaactaatc 17375640  T
Q  177 cttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    || || ||||||||||||| |||||| | |||||||||||      || | ||||| |||||||||||||||||||||||||||||||||||    
T  17375639 ctgcacttcgtctacccattcatacaaacaggtaggcggt------caaaaccact-ggggtaagcttcacatcaatcataatcaacataaa 17375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 261
Target Start/End: Complemental strand, 22595666 - 22595494
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||| ||||||| ||||| | || ||    
T  22595666 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcatcaaaagc-aactaatcctgca 22595568  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 261  Q
     |||||||||||||||||||||| |||||||||||      || | ||||||| ||||||||| ||||||| ||||||||    
T  22595567 cttcgtctacccatccatacagacaggtaggcggt------caaaaccactggaggtaagcttgacatcaaacataatca 22595494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 29162919 - 29162739
Alignment:
Q  83 atcagagcctaatctaagactccaagaa-acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| | |||||||||||||||| ||||| ||| |||| | ||| ||||||||||||||||||| ||||||| || ||    
T  29162919 atcagagcctaccctaagactctaaggatacgataacggagatagctcccgatatccaagcaatcaccaagcaactcaccaaaagc-aactagtcctgca 29162821  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     |||||| ||||||||||||||| |||||||||||      || | ||| ||||||||||||| |||||| || ||||||||||||||    
T  29162820 cttcgtccacccatccatacagacaggtaggcggt------caaaaccattgggggtaagctttacatcagtcctaatcaacataaac 29162739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 34965100 - 34965273
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||||||| |  | ||    
T  34965100 atcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcttgca 34965199  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatc 260  Q
      ||||||||||||||||| ||| |||||||||||      || | ||||| |||||||||||| |||||||||||||||    
T  34965200 cgtcgtctacccatccatatagacaggtaggcggt------caaaaccactggggggtaagctttacatcaatcataatc 34965273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 16131426 - 16131608
Alignment:
Q  83 atcagagcctaatctaagactccaag--aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttc 180  Q
    |||||||||||  ||||||||| ||   |||||||||||||||||| ||| | ||| |||  | ||| ||||||||||||||||||||||||| | || |    
T  16131426 atcagagcctaccctaagactcaaaagaaaacgataacggagatagctcctgttatccaaacaatcaccaagcaactcaccaaaagcaaactaatcctgc 16131525  T
Q  181 agttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    | ||||||||||||| |||||| | ||||||| |||      || | ||||||||| ||||||||||||||||||||||||||||||||    
T  16131526 acttcgtctacccattcatacaaacaggtaggtggt------caaaaccactggggataagcttcacatcaatcataatcaacataaac 16131608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 22468086 - 22467942
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    ||||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||| ||| ||| |  | || |||||||||||||||||||||||||    
T  22468086 gaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaatcaa-ctaatcatgcacttcgtctacccatccatacagatag 22467988  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataat 259  Q
    |||||||||      || | |||||| |||||||||| ||||||||||||||    
T  22467987 gtaggcggt------caaaaccactgagggtaagctttacatcaatcataat 22467942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 21929634 - 21929786
Alignment:
Q  109 aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatagg 208  Q
    |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||| ||||||||||| |  | || ||||||||||||| |||||| | |||    
T  21929634 aaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccgaaagcaaactaatcatgcatttcgtctacccattcatacaaacagg 21929733  T
Q  209 taggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    ||||||||      || | ||||||| |||||| || ||||||||||||||||||||||    
T  21929734 taggcggt------caaaaccactggaggtaaggtttacatcaatcataatcaacataa 21929786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 4988927 - 4988983
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4988927 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 4988983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 16235707 - 16235763
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16235707 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16235763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 19627437 - 19627493
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19627437 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 19627493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 23975647 - 23975703
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23975647 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 23975703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 33316667 - 33316611
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  33316667 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 33316611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 35017706 - 35017650
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35017706 cgtctacccatccatacagataagcaggcggtccatcacagatccactgggggtaag 35017650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 19852456 - 19852609
Alignment:
Q  108 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 207  Q
    |||| ||||||| |||||| ||||||||| |||| | ||| ||||||||||||| || |||| ||| |  | ||  ||||||||||||||||||||||||    
T  19852456 gaaatgataacgaagatagctcccgctatccaagcaatcaccaagcaactcacccaa-gcaa-ctaatcttgcatgtcgtctacccatccatacagatag 19852553  T
Q  208 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||      || | ||||| ||||||||||| ||||||||||||||| ||||||||    
T  19852554 gtaggcggt------caaaaccactaggggtaagctttacatcaatcataatccacataaac 19852609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 14628622 - 14628566
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  14628622 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 14628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 18005111 - 18005055
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  18005111 cgtctacccatccatacagataggcaggcggtccataacagatccactgggtgtaag 18005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18578773 - 18578829
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  18578773 cgtctacccatccatacagataggcagtcggttcatcacagatccactgggggtaag 18578829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 18835605 - 18835549
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  18835605 cgtctacccatccatacagataggcaggcggtccataacagacccactgggggtaag 18835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 18843961 - 18843905
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  18843961 cgtctacccatccatacagatatgcaggcggtccataacagatccactgggggtaag 18843905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 4174627 - 4174548
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||| | |||||||||||| |    ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  4174627 cgtctacccatccatacaaacaggtaggcggtcaa----aga-ccactgggggttagcttcacatcaatcataatcaacataaac 4174548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 4230256 - 4230177
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||| | |||||||||||| |    ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  4230256 cgtctacccatccatacaaacaggtaggcggtcaa----aga-ccactgggggttagcttcacatcaatcataatcaacataaac 4230177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 18397107 - 18397154
Alignment:
Q  189 tacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18397107 tacccatccatacagacaggtaggcggtccatcacagatccactgggg 18397154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 16828064 - 16828008
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||    
T  16828064 cgtctacccatccatacagataggcaggcggtccataacagatccattggggttaag 16828008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 35011377 - 35011321
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  35011377 cgtcgacccatctataaagataggcaggcggtccatcacagatccactgggggtaag 35011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 16374062 - 16374163
Alignment:
Q  3 ataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaaga 101  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||   | ||||||| | | ||||||||||  || |||||||||||| |||||||||||    
T  16374062 ataaaatctccaaatcccaacatatgggtaaaatctcaacaacatgctcaatccaagata-acataaagactcacatcctaatcagagtctaatctaaga 16374160  T
Q  102 ctc 104  Q
    |||    
T  16374161 ctc 16374163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 17858258 - 17858217
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  17858258 ccactggaggtaagcttcacatcaatcataatcaacataaac 17858217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 22846386 - 22846464
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||      || | ||||| ||| ||||||| ||||||||||||||| ||||||||    
T  22846386 cgtctacccatccatacagataggtaggcggt------caaaaccacttgggataagctttacatcaatcataatccacataaac 22846464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 33540140 - 33540069
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||| |||||||||||      || | |||||||| |||||||| |||||||||||||||||    
T  33540140 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggcgtaagctttacatcaatcataatcaa 33540069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 23219619 - 23219651
Alignment:
Q  237 gtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||||||||||||||||||||||||||    
T  23219619 gtaagcttcacatcaatcataatcaacataaac 23219651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 15006646 - 15006587
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaag 141  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||| ||||    
T  15006646 atcagagcctatcctaagactctaaggaaacgataatggagataggtcccgctatccaag 15006587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 31469517 - 31469375
Alignment:
Q  112 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 211  Q
    ||||||||||||||| ||||||||| |||| |  || |||| ||||||||||| |||| |||   || || ||||||||| |||||||| ||| ||||||    
T  31469517 cgataacggagatagctcccgctatccaagcaaacaccaagtaactcaccaaa-gcaa-ctaaccctgcacttcgtctactcatccatagagacaggtag 31469420  T
Q  212 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||      || | | ||| ||||||||||| |||||||||||||||||    
T  31469419 gcggt------caaaactactaggggtaagctttacatcaatcataatcaa 31469375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16131327 - 16131365
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctc 39  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  16131327 atataaaatctccaaatcccgacatatgggcaaaatctc 16131365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 941033 - 941001
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  941033 cgtctacccatccatacagacaggtaggcggtc 941001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 21621371 - 21621403
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  21621371 cgtctacccatccatacagacaggtaggcggtc 21621403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 25917926 - 25917958
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  25917926 cgtctacccatccatacagacaggtaggcggtc 25917958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 31163228 - 31163158
Alignment:
Q  186 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataa 258  Q
    |||||||||| |||||| |||||||||||||||| || ||| ||||| ||| | |||||||||| ||||||||    
T  31163228 gtctacccattcatacaaataggtaggcggtccaccataga-ccact-gggattagcttcacatgaatcataa 31163158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 32896227 - 32896259
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  32896227 cgtctacccatccatacagacaggtaggcggtc 32896259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 7048 - 6971
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  7048 cgtctacccatccatacagacaggtaggcggtccatcactgatccactggtggtaagctttacatcaatcataatcaa 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 37058 - 37019
Alignment:
Q  230 actgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37058 actgggggtaagcttcacatcaatcataatcaacataaac 37019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12565 - 12497
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaa 69  Q
    |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  12565 atataaattctcaaaatcccggcatatgggtaaaatctcaataataaataaatccaacaaagacataaa 12497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 744 - 688
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  744 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4545 - 4679
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaa 99  Q
    ||||||| ||||||||||||||||||||||||||||||||| | || || ||||| | || | ||||| ||||  || ||||||||||||||||||||||    
T  4545 atataaaatctccaaatcccgacatatgggtaaaatctcaacagcataacaaatctagcata-acatagagactgacatcctaatcagagcctaatctaa 4643  T
Q  100 gactccaagaaacg-ataacggagataggtcccgctat 136  Q
    |||||||  ||||| ||||||||||||| |||||||||    
T  4644 gactcca--aaacgaataacggagatagctcccgctat 4679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 4761 - 4801
Alignment:
Q  229 cactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  4761 cactgggggttaacttcacatcaatcataatcaacataaac 4801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 7384 - 7440
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7384 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 91079 - 91023
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  91079 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 91023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 86210 - 86154
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  86210 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 86154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 53420 - 53344
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  53420 cgtctacccatccaaacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 53344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 58609 - 58537
Alignment:
Q  189 tacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  58609 tacccatccatacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 58537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 247710 - 247627
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||| ||||    
T  247710 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaacaaaaac 247627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 247898 - 247854
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca 46  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||    
T  247898 atataaaatctccaaatccc-acatatgggcaaaatctcaataaca 247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 25721 - 25900
Alignment:
Q  83 atcagagcctaatctaagactccaagaaa-cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||||||  ||||||||| ||| || ||||||||||||||| ||||||||| |||| | ||| |||||||||||||||| |||| ||| | || ||    
T  25721 atcagagcctatcctaagactctaaggaagcgataacggagatagctcccgctatccaaggaatcaccaagcaactcaccaaa-gcaa-ctaatcctgca 25818  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
      ||||||||||||||||||||| | |||||||||      || | |||||||||||||| || | ||||||||||||| ||||||||    
T  25819 cctcgtctacccatccatacagacatgtaggcggt------caaaaccactgggggtaagatttatatcaatcataatccacataaac 25900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 331082 - 331026
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  331082 cgtctacccatccatacagacaggtaggcagtccatcacagatccactgggggtaag 331026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 84588 - 84756
Alignment:
Q  83 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 181  Q
    |||||||| || |||||||||| ||| |||||||||||||||||| |||||||||            ||||||||||||| ||||| ||||| | || ||    
T  84588 atcagagcttattctaagactctaaggaaacgataacggagatagctcccgctat-----------ccaagcaactcacc-aaagc-aactaatcctgca 84674  T
Q  182 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     ||||||||||||||||||||||  ||||||||||      || | |||||  |||||||||| ||||||||||||||| ||||||||    
T  84675 cttcgtctacccatccatacagacgggtaggcggt------caaaaccacttagggtaagctttacatcaatcataatccacataaac 84756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 15254 - 15172
Alignment:
Q  186 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||| ||||| |||| | ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  15254 gtcttcccattcatataaataggtaggcggtccatcacaga-ccactgggggttagcttcacataaatcataatcaacataaac 15172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 3685 - 3543
Alignment:
Q  112 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 211  Q
    ||||||||||||||| ||||||||| |||| | ||| | |||||||||||||| |||| ||| |||| || |||||||||||||||||||||| | ||||    
T  3685 cgataacggagatagctcccgctatccaagcaatcaccgagcaactcaccaaa-gcaa-ctaattctgcacttcgtctacccatccatacagacatgtag 3588  T
Q  212 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||      || | |||||||||||||| || |||||||||||||||||    
T  3587 gcggt------caaaaccactgggggtaagttttacatcaatcataatcaa 3543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 11964 - 12057
Alignment:
Q  64 cataaagaccaacgtcctaatcagagcctaatctaagactccaa--gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaa 155  Q
    |||||| |||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||| |||| | ||| |||||||    
T  11964 cataaaaaccaacatcctaatcagagcctaatctaagactccaaaggaaacgacaacggagatagctcccgctatccaagcactcaccaagcaa 12057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 5341 - 5417
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  | ||||||| |||||||||    
T  5341 cgtctacccatccatacagataggcaggcggtccatcacagatccactaggggtaagtattacatcaa-cataatcaa 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 13323 - 13217
Alignment:
Q  157 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcat 256  Q
    ||||| ||||||||||| |||| || ||||||||||||| |||||||| |||||||||||      || | |||||  ||||||||||||||||||||||    
T  13323 tcaccgaaagcaaactatttctacacttcgtctacccattcatacagacaggtaggcggt------caaaaccactatgggtaagcttcacatcaatcat 13230  T
Q  257 aatcaacataaac 269  Q
    |||||||||||||    
T  13229 aatcaacataaac 13217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 77540 - 77593
Alignment:
Q  188 ctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  77540 ctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 77593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 5595 - 5678
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||||||||| |||||| |||||||||||||||| || | | ||||||||||| | ||||||||||||||||||||||||||||    
T  5595 cgtctacccattcatacaaataggtaggcggtccaccataca-ccactgggggttaacttcacatcaatcataatcaacataaac 5678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 262
Target Start/End: Original strand, 5923 - 6066
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||||||| |||||    
T  5923 acgataacggagatagctcccgctatccaagaaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacagacaggta 6020  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||      || | |||||||||||||| || |||||||||||||||||    
T  6021 ggcggt------caaaaccactgggggtaagatttacatcaatcataatcaa 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 2719 - 2663
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  2719 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 2663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 17674 - 17730
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17674 cgtctacccatccatacagagaggtaggcggtccatcacagatccaatgggggtaag 17730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 30977 - 31033
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30977 cgtctacccatccatacagacaggtaggcggtccatcacagatccacttggggtaag 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 27889 - 27945
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  27889 cgtctacccatccatacagacaggtaggcggtccatcatagatccactgggggtaag 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 56145 - 56201
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  56145 cgtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaag 56201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 21405 - 21349
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21405 cgtctacccatccatacagatatgcaggcggtccatcacagatccactgggggtaag 21349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 5160 - 5216
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5160 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 5216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 16711 - 16765
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16711 tctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 16317 - 16371
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16317 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 16371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 22981 - 23035
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  22981 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 23035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 30589 - 30670
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 267  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  30589 cgtctaccaatccatacagacaggcaggcggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 30670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 1002 - 1078
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  1002 cgtctacccatccaaacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 1078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 13190 - 13114
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||  | ||||||| |||||||||    
T  13190 cgtctacccatccatacagataggcaggcggtccataacagatccactggcggtaagtattacatcaa-cataatcaa 13114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 31059 - 31115
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||    
T  31059 cgtctacccatccatacagataggcaggcggtccataaaagatccactaggggtaag 31115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 166476 - 166400
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  166476 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 166400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 167014 - 166969
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatcca 230  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||    
T  167014 cgtctacccatccatacagataggcatgcggtccataacagatcca 166969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 2414 - 2470
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2414 cgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 267 - 323
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  267 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 5278 - 5334
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  5278 cgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 10183 - 10127
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  10183 cgtctacccatccatacaaataggtaggcggtccatcacagatccattgtgggtaag 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 220 - 276
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  220 cgtctacccatccatatagataggcaggcggtccataacagatccactgggggtaag 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 2995 - 3046
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  2995 cgtctacccatccatacaggcaggcaggcggtccatcacagatccactgggg 3046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 15300 - 15244
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15300 cgtctacctatccatacagataggcaggcggtccataacagatccactgggggtaag 15244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 94206 - 94262
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  94206 cgtctacccatccatacaaacaggtaggcggtccatcacagatccactaggggtaag 94262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 27107 - 27159
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 237  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  27107 cgtctacccatccatacagataggcaagcggtccatcacagatccactggggg 27159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1923 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1923
Description:

Target: scaffold1923; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 646 - 720
Alignment:
Q  187 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||| |||||| |||||||||||||||| |||||| |||||| |||| | |||||||||||||||||||||    
T  646 tctacccattcatacaaataggtaggcggtccaccacaga-ccactgagggttatcttcacatcaatcataatcaa 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 262
Target Start/End: Original strand, 36093 - 36235
Alignment:
Q  112 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 211  Q
    ||||||||||||||| ||||||||| |||| | ||| | ||||||||||| ||||| ||||| | || || |||||||||||||||||||||| | ||||    
T  36093 cgataacggagatagctcccgctatccaagcaatcaccgagcaactcacc-aaagc-aactaatcctgcacttcgtctacccatccatacagaaatgtag 36190  T
Q  212 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||      || | |||||| | |||||||| |||||||||||||||||    
T  36191 gcggt------caaaaccactgagagtaagctttacatcaatcataatcaa 36235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 4101 - 4288
Alignment:
Q  79 cctaatcagagcctaatctaagactccaa-gaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaa-ctagt 175  Q
    |||||| ||| ||||||||||||||| || ||| |||||| |||||| || ||||||||| |||  | ||| ||||||||||||| |||||||| ||| |    
T  4101 cctaattagaccctaatctaagactctaaagaaccgataatggagattagctcccgctatccaaacaatcaccaagcaactcaccgaaagcaaaactact 4200  T
Q  176 tcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
     || || | ||| ||||||| |||||| | |||||||| |||      ||| ||||||||||| ||||| |||||||||||||||| |||||||    
T  4201 cctgcactccgtttacccattcatacaaacaggtaggcagtc------agaaccactgggggttagctttacatcaatcataatcatcataaac 4288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 25947 - 25805
Alignment:
Q  111 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 210  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||||   |||||  ||| || |||||||||||||||||||  | |||||    
T  25947 acgataacggagatagctcccgctatccaagcaaccaccaagcaactcaccaaaa--caactaactctgcacttcgtctacccatccataccaacaggta 25850  T
Q  211 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||      || | ||||| ||||||||||| |||||||||||||||||    
T  25849 ggcggt------caaaaccact-ggggtaagctttacatcaatcataatcaa 25805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 8645 - 8709
Alignment:
Q  197 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||    
T  8645 catacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaa 8709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 743 - 799
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||| ||||||||||||||| || |||||||| ||||||||||||||||||||    
T  743 cgtctacctatccatacagataggcagacggtccataacagatccactgggggtaag 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 4892 - 4836
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||    
T  4892 cgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 509 - 453
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  509 cgtctacctatccatacagataggcaggcggtccataacagatccactaggggtaag 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 26390 - 26446
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| || |||||    
T  26390 cgtctacccatccatacagacaggcaggcggtccatcacagatccacttggagtaag 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 18894 - 18928
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||||| ||||||||||||    
T  18894 ttcgtctacccatccatacagacaggtaggcggtc 18928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 24335 - 24303
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  24335 cgtctacccatccatacagacaggtaggcggtc 24303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 49732 - 49676
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||    
T  49732 cgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 49676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 24636 - 24580
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  24636 cgtctacccatccatacagacatgtaggcggtccatcacaaatccacttggggtaag 24580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 13150 - 13103
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccact 232  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13150 cgtctacccatccatacagataggcaggcggtccataacagatccact 13103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 1598 - 1630
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  1598 cgtctacccatccatacagacaggtaggcggtc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 29369 - 29447
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    |||||||| |||||||||||||||||||||||| |      | ||||||||||||||| | ||||||||||||||| ||||||||    
T  29369 cgtctacctatccatacagataggtaggcggtcaa------aaccactgggggtaagcattacatcaatcataatccacataaac 29447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 3144 - 3088
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||    
T  3144 cgtctacccatacatacagataggcagacggtccataacagatccactaggggtaag 3088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8339 - 8447
Alignment:
Q  1 atataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtccta-atcagagcctaatcta 98  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | || ||| |||| |  | | ||||||||||  || ||||| ||||||||||| ||||    
T  8339 atataaaatctccaaatcccgacatatgggtaatatctcaacatcacaatcaatctagaataaacataaagacatacatcctagatcagagcctactcta 8438  T
Q  99 agactccaa 107  Q
    |||||||||    
T  8439 agactccaa 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 8521 - 8596
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 261  Q
    ||||||||||| | |||| |||||||| ||||||| |||| | || |||||||| ||||| ||||||||||||||||    
T  8521 cgtctacccattcgtacaaataggtagtcggtccaccacaaaccc-ctgggggttagcttgacatcaatcataatca 8596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 262
Target Start/End: Original strand, 104151 - 104293
Alignment:
Q  112 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 211  Q
    ||||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | |||||  ||||||||||||||||||||| ||||||    
T  104151 cgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatccttcacgtcgtctacccatccatacagacaggtag 104248  T
Q  212 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||      || | |||||||  |||||||| |||||||||||||||||    
T  104249 gcggt------caaaaccactggaagtaagctttacatcaatcataatcaa 104293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 3603 - 3678
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||||||| |||||| |||| ||||||||||| |||| | ||||| ||||| ||||||||||| |||||||||||    
T  3603 cgtctacccattcatacaaatagttaggcggtccaccacata-ccactaggggttagcttcacatc-atcataatcaa 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 22449 - 22408
Alignment:
Q  228 ccactgggggtaagcttcacatcaatcataatcaacataaac 269  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  22449 ccactaggggtaagcttcacatcaatcacaatcaacataaac 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 20385 - 20459
Alignment:
Q  183 ttcgtctacccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||||| |||||||||||       | ||||||| |||||||||||| |||||||||||||||||    
T  20385 ttcgtctacccatccatacagacaggtaggcggt------aaaatccactggggggtaagctttacatcaatcataatcaa 20459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 1917 - 1851
Alignment:
Q  149 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||| |||| ||| | || || |||||||||| ||||||||||||||||||||||||    
T  1917 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacctatccatacagataggtaggcggtc 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 4014 - 4058
Alignment:
Q  192 ccatccatacagataggtaggcggtccatcacagatccactgggg 236  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||    
T  4014 ccatccataaagaaaggtaggcggtccatcactgatccactgggg 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 99100 - 99023
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 268  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||| | | ||||||||||||||| |||||||    
T  99100 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaaacattacatcaatcataatccacataaa 99023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 28521 - 28556
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccat 220  Q
    |||||||||||||||||||||||| |||||||||||    
T  28521 cgtctacccatccatacagataggcaggcggtccat 28556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 216
Target Start/End: Original strand, 40924 - 40955
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggt 216  Q
    ||||||||||||||||||||||||||||||||    
T  40924 cgtctacccatccatacagataggtaggcggt 40955  T

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Target: scaffold1068 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 1514 - 1585
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    |||||||||||||||||||| |||||||||||      || | ||||| ||||||||| | |||||||||||||||||    
T  1514 cgtctacccatccatacagacaggtaggcggt------caaaaccactaggggtaagcattacatcaatcataatcaa 1585  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 853 - 886
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  853 tcgtctacccatccatacagacaggtaggcggtc 886  T

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Target: scaffold0521 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 6836 - 6869
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  6836 tcgtctacccatccatacagacaggtaggcggtc 6869  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 110276 - 110200
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 262  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||| ||||||||  | ||||||| |||||||||    
T  110276 cgtctactcacccatacaggcaagtaggcggtccataacagatccactaggggtaagtattacatcaa-cataatcaa 110200  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 114206 - 114173
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||| ||||||||||||||    
T  114206 tcgtctacccatccatacaaataggtaggcggtc 114173  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 130146 - 130179
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||||||||||||||||| ||||||||||||    
T  130146 tcgtctacccatccatacagacaggtaggcggtc 130179  T

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Target: scaffold0786 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 5009 - 5041
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  5009 cgtctacccatccatacagacaggtaggcggtc 5041  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 5310 - 5278
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  5310 cgtctacccatccatacagacaggtaggcggtc 5278  T

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Target: scaffold0503 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 9629 - 9661
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  9629 cgtctacccatccatacagacaggtaggcggtc 9661  T

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Target: scaffold0434 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 2852 - 2884
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  2852 cgtctacccatccatacagacaggtaggcggtc 2884  T

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Target: scaffold0390 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 3542 - 3574
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  3542 cgtctacccatccatacagacaggtaggcggtc 3574  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 6927 - 6959
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  6927 cgtctacccatccatacagacaggtaggcggtc 6959  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 31555 - 31523
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  31555 cgtctacccatccatacagacaggtaggcggtc 31523  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 29577 - 29633
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 241  Q
    ||||||| || ||||||||  | ||||||||||||| |||||||||| |||||||||    
T  29577 cgtctactcacccatacaggcaagtaggcggtccataacagatccaccgggggtaag 29633  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 7244 - 7276
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  7244 cgtctacccatccatacagacaggtaggcggtc 7276  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 45873 - 45841
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  45873 cgtctacccatccatacagacaggtaggcggtc 45841  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 25519 - 25487
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    ||||||| |||||||||||||||||||||||||    
T  25519 cgtctacgcatccatacagataggtaggcggtc 25487  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 59810 - 59842
Alignment:
Q  185 cgtctacccatccatacagataggtaggcggtc 217  Q
    |||||||||||||||||||| ||||||||||||    
T  59810 cgtctacccatccatacagacaggtaggcggtc 59842  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 76532 - 76564
Alignment:
Q  184 tcgtctacccatccatacagataggtaggcggt 216  Q
    ||||||||||||||||||||||||||| |||||    
T  76532 tcgtctacccatccatacagataggtacgcggt 76564  T

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