View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6099_low_27 (Length: 251)
Name: NF6099_low_27
Description: NF6099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6099_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 233743 - 233990
Alignment:
| Q |
1 |
ttagtgaatctgagttaatcagcttttgtgtctaaatggtggtcatgaatcatgcatgaaatgatgctaatgaactaactttggtctctcattagacggt |
100 |
Q |
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| T |
233743 |
ttagtgaatctgagttaatcagcttttgtgtctaaatggtggtcatgaatcatgcatgaaatgatgctaatgaactaactttggtctctcattagacggt |
233842 |
T |
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| Q |
101 |
ggaaaagagtaaaatagaaagcactaaatgaaccgtgtatatttctctagtaacactttgggctgtttcattcttccggcaccttttaattagtaaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233843 |
ggaaaagagtaaaatagaaagcactaaatgaaccgtgtatatttctctagtaacactttgggctgtttcattcttccggcaccttttaattagtaaaatt |
233942 |
T |
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| Q |
201 |
atataggacccatttccttttatttaatacatccacctatgcttctcc |
248 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
233943 |
atataggacccatttccttttatttaatacatccacccatgctgctcc |
233990 |
T |
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