View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6103_high_16 (Length: 276)
Name: NF6103_high_16
Description: NF6103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6103_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 261
Target Start/End: Complemental strand, 31532863 - 31532615
Alignment:
| Q |
13 |
aatattgaagtttcatgatgaaatagtgtacacacattatatggtttcattgatttaatattcatttcctaattattatttttatggaaattagcgaaac |
112 |
Q |
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| T |
31532863 |
aatattgaagtttcatgatgaaatagtgtacacacattatatggtttcattgatttaatattcatttcctaattattatttttatggaaattagcaaaac |
31532764 |
T |
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| Q |
113 |
aatttggttaccagaggagtccaccaccatttttggctttggagaaattccaaaacggttttaagcagaacattttgaggggtgtgaattttgcttcagc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31532763 |
aatttggttaccagaggagtccaccaccatttttggctttggagaaattccaaaacggttttaagcagaacattttgaggggtgtgaattttgcttcagc |
31532664 |
T |
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| Q |
213 |
tggatctggaattctaagccaaacaggacagaaacaatgggtaataact |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31532663 |
tggatctggaattctaagccaaacaggacagaaacaatgggtaataact |
31532615 |
T |
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