View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6103_low_25 (Length: 246)

Name: NF6103_low_25
Description: NF6103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6103_low_25
NF6103_low_25
[»] chr5 (34 HSPs)
chr5 (1-228)||(26301854-26302072)
chr5 (66-190)||(20959524-20959648)
chr5 (69-191)||(12328224-12328346)
chr5 (69-190)||(17039630-17039751)
chr5 (88-191)||(23974574-23974677)
chr5 (69-189)||(8108860-8108980)
chr5 (69-189)||(12045746-12045866)
chr5 (69-189)||(38837671-38837791)
chr5 (66-189)||(11927786-11927909)
chr5 (69-192)||(16121836-16121959)
chr5 (69-191)||(618313-618435)
chr5 (69-191)||(746866-746988)
chr5 (69-189)||(23408999-23409120)
chr5 (66-179)||(32726736-32726849)
chr5 (69-180)||(23975654-23975765)
chr5 (69-190)||(7003729-7003848)
chr5 (70-160)||(17079425-17079515)
chr5 (66-155)||(10420286-10420375)
chr5 (69-190)||(24138840-24138961)
chr5 (69-190)||(33818560-33818681)
chr5 (69-189)||(4125188-4125308)
chr5 (69-189)||(7888816-7888936)
chr5 (66-190)||(17036411-17036535)
chr5 (69-189)||(26708585-26708705)
chr5 (69-189)||(26978319-26978439)
chr5 (69-191)||(13620125-13620247)
chr5 (66-112)||(27428089-27428135)
chr5 (69-189)||(2472714-2472834)
chr5 (69-190)||(10494756-10494877)
chr5 (69-182)||(15060992-15061105)
chr5 (69-190)||(28265474-28265595)
chr5 (69-190)||(35620343-35620463)
chr5 (69-189)||(8886851-8886971)
chr5 (69-189)||(36597340-36597460)
[»] chr3 (52 HSPs)
chr3 (37-228)||(13615398-13615589)
chr3 (69-189)||(46012728-46012848)
chr3 (66-183)||(1628227-1628344)
chr3 (69-190)||(5565737-5565858)
chr3 (69-189)||(10941665-10941785)
chr3 (72-191)||(1310957-1311076)
chr3 (69-190)||(9652593-9652714)
chr3 (69-190)||(13921340-13921461)
chr3 (69-189)||(5744431-5744551)
chr3 (69-189)||(5781390-5781510)
chr3 (69-189)||(11007683-11007803)
chr3 (69-189)||(23773492-23773612)
chr3 (69-189)||(29216007-29216127)
chr3 (66-189)||(31250100-31250223)
chr3 (69-191)||(8110354-8110476)
chr3 (69-191)||(13905036-13905158)
chr3 (69-179)||(49915466-49915576)
chr3 (69-189)||(3461310-3461430)
chr3 (69-190)||(25882585-25882706)
chr3 (69-189)||(5260952-5261072)
chr3 (74-182)||(8546265-8546373)
chr3 (69-189)||(21816736-21816856)
chr3 (66-190)||(46942499-46942623)
chr3 (69-189)||(48404875-48404995)
chr3 (66-173)||(20615359-20615466)
chr3 (69-191)||(15063990-15064112)
chr3 (71-189)||(19223466-19223584)
chr3 (69-191)||(19269862-19269984)
chr3 (69-182)||(18539819-18539932)
chr3 (70-115)||(31433753-31433798)
chr3 (69-189)||(8428186-8428306)
chr3 (69-189)||(19610353-19610473)
chr3 (69-189)||(26098828-26098948)
chr3 (66-189)||(26830441-26830565)
chr3 (69-189)||(27449103-27449223)
chr3 (69-189)||(29236059-29236179)
chr3 (89-189)||(43329763-43329863)
chr3 (69-188)||(11915773-11915892)
chr3 (69-160)||(17582330-17582421)
chr3 (69-115)||(11837288-11837334)
chr3 (69-191)||(18104528-18104650)
chr3 (66-112)||(23217285-23217331)
chr3 (69-163)||(28389988-28390082)
chr3 (69-189)||(1745488-1745607)
chr3 (69-189)||(11219153-11219273)
chr3 (69-189)||(16299876-16299996)
chr3 (69-189)||(17762657-17762777)
chr3 (69-189)||(18091547-18091667)
chr3 (69-189)||(18380039-18380159)
chr3 (69-189)||(19063977-19064097)
chr3 (101-189)||(20761950-20762038)
chr3 (89-189)||(21020100-21020200)
[»] chr7 (38 HSPs)
chr7 (69-190)||(20429484-20429605)
chr7 (66-189)||(25777112-25777235)
chr7 (69-190)||(11036526-11036647)
chr7 (74-191)||(48933160-48933277)
chr7 (69-189)||(27806037-27806157)
chr7 (66-181)||(22501610-22501725)
chr7 (69-191)||(1824198-1824320)
chr7 (69-199)||(20174039-20174169)
chr7 (69-190)||(1842913-1843034)
chr7 (69-190)||(3904477-3904598)
chr7 (69-190)||(15014404-15014525)
chr7 (72-189)||(22486416-22486533)
chr7 (66-183)||(32267363-32267479)
chr7 (69-189)||(1907374-1907494)
chr7 (69-189)||(18217848-18217968)
chr7 (69-189)||(21917334-21917454)
chr7 (69-189)||(28800897-28801017)
chr7 (69-191)||(38057651-38057773)
chr7 (69-190)||(9698537-9698658)
chr7 (69-190)||(37135284-37135405)
chr7 (69-189)||(3872187-3872307)
chr7 (69-189)||(6849211-6849331)
chr7 (69-189)||(20923958-20924078)
chr7 (69-189)||(21623040-21623159)
chr7 (69-189)||(23539251-23539371)
chr7 (69-189)||(36993839-36993959)
chr7 (66-180)||(26415440-26415554)
chr7 (69-191)||(42926417-42926540)
chr7 (69-115)||(15969803-15969849)
chr7 (69-179)||(26577284-26577394)
chr7 (69-115)||(33427709-33427755)
chr7 (69-190)||(2650827-2650948)
chr7 (69-190)||(14786634-14786755)
chr7 (69-190)||(39979623-39979744)
chr7 (69-189)||(23232058-23232178)
chr7 (69-189)||(23750736-23750856)
chr7 (69-189)||(24605857-24605977)
chr7 (75-179)||(27304895-27304999)
[»] chr6 (42 HSPs)
chr6 (69-190)||(15961406-15961527)
chr6 (66-189)||(12351586-12351709)
chr6 (69-189)||(16250802-16250922)
chr6 (66-132)||(13668051-13668117)
chr6 (69-190)||(33250707-33250828)
chr6 (69-189)||(495627-495747)
chr6 (69-189)||(6605496-6605616)
chr6 (69-189)||(9892982-9893102)
chr6 (69-189)||(15448404-15448524)
chr6 (69-189)||(20182164-20182284)
chr6 (69-189)||(22153707-22153827)
chr6 (69-188)||(5360428-5360547)
chr6 (125-183)||(12157382-12157440)
chr6 (66-180)||(12680194-12680307)
chr6 (69-183)||(21140958-21141072)
chr6 (69-190)||(6065456-6065577)
chr6 (69-190)||(11049750-11049871)
chr6 (69-190)||(11530244-11530365)
chr6 (69-182)||(14886580-14886693)
chr6 (69-189)||(6598483-6598603)
chr6 (75-191)||(9060115-9060231)
chr6 (69-189)||(26224447-26224567)
chr6 (74-189)||(2669333-2669448)
chr6 (69-184)||(5192194-5192309)
chr6 (69-183)||(12200713-12200827)
chr6 (66-115)||(5270408-5270457)
chr6 (69-190)||(15364457-15364578)
chr6 (69-190)||(24661008-24661129)
chr6 (69-190)||(28364930-28365051)
chr6 (69-189)||(9885262-9885382)
chr6 (68-183)||(12205191-12205306)
chr6 (69-128)||(33636999-33637058)
chr6 (66-112)||(12845019-12845065)
chr6 (66-112)||(21691573-21691619)
chr6 (69-183)||(25398021-25398135)
chr6 (66-131)||(30745777-30745840)
chr6 (73-190)||(6978300-6978417)
chr6 (69-190)||(12160846-12160966)
chr6 (69-190)||(21990174-21990294)
chr6 (69-190)||(22083857-22083978)
chr6 (69-189)||(2992634-2992754)
chr6 (69-189)||(26939606-26939726)
[»] chr1 (41 HSPs)
chr1 (66-191)||(38531168-38531293)
chr1 (66-191)||(46865259-46865384)
chr1 (69-189)||(17661069-17661189)
chr1 (66-183)||(26825256-26825373)
chr1 (88-190)||(41063235-41063337)
chr1 (66-179)||(16913587-16913700)
chr1 (70-190)||(46339444-46339564)
chr1 (69-189)||(52183697-52183817)
chr1 (69-192)||(28229452-28229575)
chr1 (69-191)||(4340426-4340548)
chr1 (69-190)||(41120736-41120857)
chr1 (69-189)||(8940994-8941114)
chr1 (69-189)||(9109975-9110095)
chr1 (69-189)||(12720828-12720948)
chr1 (69-189)||(22603567-22603687)
chr1 (69-189)||(45839311-45839431)
chr1 (69-188)||(9259184-9259303)
chr1 (69-191)||(23457916-23458038)
chr1 (69-190)||(50845329-50845450)
chr1 (69-189)||(12161833-12161953)
chr1 (69-189)||(20408160-20408280)
chr1 (69-192)||(6412050-6412173)
chr1 (69-191)||(19865263-19865385)
chr1 (69-190)||(6459236-6459357)
chr1 (69-160)||(9882069-9882157)
chr1 (69-189)||(29549437-29549557)
chr1 (69-189)||(48522537-48522657)
chr1 (69-189)||(50092298-50092418)
chr1 (66-189)||(19081744-19081867)
chr1 (66-189)||(19129632-19129755)
chr1 (66-112)||(3786416-3786462)
chr1 (66-112)||(13523038-13523084)
chr1 (69-155)||(15243104-15243190)
chr1 (73-183)||(20290327-20290436)
chr1 (73-179)||(30928388-30928494)
chr1 (69-190)||(14760886-14761007)
chr1 (69-182)||(22158821-22158934)
chr1 (69-189)||(9177119-9177239)
chr1 (69-189)||(9985327-9985447)
chr1 (69-189)||(13308820-13308940)
chr1 (88-188)||(25787998-25788098)
[»] chr8 (34 HSPs)
chr8 (69-190)||(19256229-19256350)
chr8 (69-189)||(17810315-17810435)
chr8 (66-190)||(17003276-17003400)
chr8 (72-190)||(9631423-9631542)
chr8 (66-189)||(29345085-29345208)
chr8 (69-190)||(24636669-24636791)
chr8 (69-190)||(19240884-19241005)
chr8 (69-190)||(19314068-19314189)
chr8 (69-190)||(30466953-30467074)
chr8 (69-189)||(4330995-4331115)
chr8 (69-190)||(4647754-4647875)
chr8 (69-190)||(19488060-19488181)
chr8 (94-183)||(35678065-35678154)
chr8 (69-189)||(6817071-6817191)
chr8 (69-189)||(24193196-24193316)
chr8 (69-189)||(24576024-24576144)
chr8 (69-189)||(25655858-25655978)
chr8 (69-189)||(27910764-27910884)
chr8 (69-189)||(27957183-27957303)
chr8 (69-179)||(37992116-37992226)
chr8 (69-190)||(13060930-13061051)
chr8 (69-182)||(18010067-18010180)
chr8 (69-189)||(22939330-22939450)
chr8 (69-189)||(11938762-11938881)
chr8 (69-189)||(43431559-43431679)
chr8 (136-191)||(6084244-6084299)
chr8 (88-190)||(10917863-10917965)
chr8 (69-155)||(26399041-26399127)
chr8 (69-150)||(5879221-5879302)
chr8 (89-190)||(21350515-21350616)
chr8 (69-190)||(27869255-27869376)
chr8 (66-127)||(31344234-31344295)
chr8 (69-189)||(8555304-8555424)
chr8 (69-189)||(17824616-17824736)
[»] chr4 (32 HSPs)
chr4 (69-190)||(32175736-32175857)
chr4 (69-191)||(4586756-4586878)
chr4 (69-190)||(45532578-45532699)
chr4 (73-189)||(30420033-30420149)
chr4 (69-189)||(54539303-54539423)
chr4 (69-188)||(4627079-4627198)
chr4 (66-189)||(9913272-9913395)
chr4 (69-195)||(9238619-9238745)
chr4 (69-190)||(46286228-46286349)
chr4 (69-189)||(27040025-27040145)
chr4 (69-191)||(4606827-4606949)
chr4 (69-191)||(16915386-16915508)
chr4 (69-191)||(22128310-22128432)
chr4 (69-190)||(13028815-13028936)
chr4 (69-189)||(9670479-9670599)
chr4 (69-189)||(29625342-29625462)
chr4 (69-192)||(25026574-25026697)
chr4 (70-188)||(24682328-24682446)
chr4 (69-194)||(7111941-7112066)
chr4 (69-190)||(13564914-13565035)
chr4 (69-189)||(1638464-1638584)
chr4 (69-189)||(19839196-19839316)
chr4 (69-189)||(22168285-22168405)
chr4 (69-191)||(55309210-55309333)
chr4 (69-155)||(2275712-2275798)
chr4 (66-108)||(3613009-3613051)
chr4 (69-191)||(19680422-19680544)
chr4 (69-183)||(37378629-37378743)
chr4 (66-155)||(38223524-38223613)
chr4 (69-189)||(5399626-5399746)
chr4 (69-113)||(18744146-18744190)
chr4 (69-189)||(30508004-30508124)
[»] scaffold0128 (1 HSPs)
scaffold0128 (69-183)||(10669-10783)
[»] chr2 (31 HSPs)
chr2 (69-191)||(18609529-18609651)
chr2 (69-182)||(15636742-15636855)
chr2 (69-190)||(43408510-43408631)
chr2 (69-189)||(8430311-8430431)
chr2 (69-189)||(12779615-12779735)
chr2 (69-189)||(18551253-18551373)
chr2 (69-189)||(29749403-29749523)
chr2 (69-189)||(41736187-41736307)
chr2 (66-191)||(2556107-2556232)
chr2 (69-190)||(14757120-14757241)
chr2 (69-190)||(26243320-26243441)
chr2 (73-189)||(22140364-22140480)
chr2 (69-189)||(32185847-32185967)
chr2 (69-189)||(41637633-41637753)
chr2 (69-188)||(28319580-28319699)
chr2 (69-179)||(18916411-18916520)
chr2 (69-190)||(32008967-32009089)
chr2 (69-182)||(1141551-1141664)
chr2 (69-190)||(13788054-13788175)
chr2 (69-182)||(32300466-32300579)
chr2 (69-189)||(7093583-7093703)
chr2 (69-189)||(20065074-20065194)
chr2 (69-189)||(21293711-21293831)
chr2 (69-189)||(30783353-30783473)
chr2 (88-191)||(44722966-44723069)
chr2 (69-191)||(27327631-27327753)
chr2 (123-189)||(40018871-40018937)
chr2 (66-155)||(13134654-13134743)
chr2 (72-189)||(44476375-44476492)
chr2 (101-189)||(27039908-27039996)
chr2 (71-191)||(28841340-28841460)
[»] scaffold0219 (1 HSPs)
scaffold0219 (69-190)||(19622-19743)
[»] scaffold0007 (2 HSPs)
scaffold0007 (69-190)||(3761-3882)
scaffold0007 (69-189)||(202793-202913)
[»] scaffold0002 (1 HSPs)
scaffold0002 (69-190)||(439982-440103)
[»] scaffold0603 (1 HSPs)
scaffold0603 (69-189)||(5979-6099)
[»] scaffold0014 (1 HSPs)
scaffold0014 (69-189)||(22230-22350)
[»] scaffold0009 (1 HSPs)
scaffold0009 (69-189)||(219655-219775)
[»] scaffold0001 (3 HSPs)
scaffold0001 (69-189)||(84322-84442)
scaffold0001 (69-183)||(8116-8230)
scaffold0001 (69-183)||(21848-21962)
[»] scaffold0655 (1 HSPs)
scaffold0655 (68-190)||(3161-3283)
[»] scaffold0069 (1 HSPs)
scaffold0069 (69-179)||(10177-10287)
[»] scaffold0006 (2 HSPs)
scaffold0006 (69-183)||(84680-84794)
scaffold0006 (66-129)||(121047-121110)
[»] scaffold0576 (1 HSPs)
scaffold0576 (69-190)||(9228-9349)
[»] scaffold0240 (1 HSPs)
scaffold0240 (69-190)||(14989-15110)
[»] scaffold0087 (1 HSPs)
scaffold0087 (69-189)||(37787-37907)
[»] scaffold0047 (1 HSPs)
scaffold0047 (69-189)||(58601-58721)
[»] scaffold0599 (1 HSPs)
scaffold0599 (69-188)||(7524-7643)
[»] scaffold0184 (1 HSPs)
scaffold0184 (69-183)||(7475-7589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-190)||(26502-26623)
[»] scaffold0058 (1 HSPs)
scaffold0058 (69-190)||(74540-74661)


Alignment Details
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26301854 - 26302072
Alignment:
Q  1 tattttccttgtactctattttactctaaacttcaaaaggacaattataaaatagattgaaagaaagagagggaaaacgtgaaattgctctctaatttca 100  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26301854 tattttccttgtactccattttactctaaacttcaaaaggaaaattataaaatagattgaaagaaagagagggaaaacgtgaaattgctctctaattcca 26301953  T
Q  101 tcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagtgttgtcacatta 200  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||    
T  26301954 tcactaaattttacagttaaggaatttgtaaggggttttatttcttccgtcactatttttc---------tttgctttttctagtagtgttgtcacatta 26302044  T
Q  201 tacacggtgaaccaactgaagtgaaaca 228  Q
    ||||||||||||||||||||||||||||    
T  26302045 tacacggtgaaccaactgaagtgaaaca 26302072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 20959524 - 20959648
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  |||||||||| | |||||||||||||||  |||| ||||||| |||  |||||||| |||||||| |  ||||||| |    
T  20959524 agagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcagtgattttcctcc 20959623  T
Q  166 ttaattttgctttttctattagtgt 190  Q
     ||||||| ||||||||| ||||||    
T  20959624 ctaattttactttttctagtagtgt 20959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 12328346 - 12328224
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| |||||||||| | |||||||||||| || | ||||||||||| |||  ||| |||| |||||| |||| ||| |||   ||    
T  12328346 gagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttactaatttccctcacta 12328247  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  12328246 attttgctttttctagtagtgtt 12328224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 17039751 - 17039630
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  17039751 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcctcacta 17039652  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  17039651 attttgctttttctagtagtgt 17039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 191
Target Start/End: Complemental strand, 23974677 - 23974574
Alignment:
Q  88 ctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattag 187  Q
    |||||||||||| ||| |||||||||||   ||| ||||||| || | |||||||| ||||||||||| ||||||||| ||||||| ||||| ||| |||    
T  23974677 ctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttccttcctaatttttcttttcctagtag 23974578  T
Q  188 tgtt 191  Q
    ||||    
T  23974577 tgtt 23974574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 8108980 - 8108860
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  8108980 gagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctctcta 8108881  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  8108880 attttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 12045746 - 12045866
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||   ||||||||| | |||||||||||||||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  12045746 gagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 12045845  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  12045846 attttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 38837791 - 38837671
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  38837791 gagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 38837692  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  38837691 attttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 11927909 - 11927786
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||| ||||||||||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||| |||||||| |||| || ||| |||  || |    
T  11927909 agagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctctaatttatctcc 11927810  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||||||||||||| |||||    
T  11927809 ctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 16121959 - 16121836
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||||||||||||  |   ||| ||||||| |||  |||||||| ||||||||||| ||| |||   ||    
T  16121959 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcactaatttccctcgcta 16121860  T
Q  169 attttgctttttctattagtgttg 192  Q
    ||||||||||||||| ||||||||    
T  16121859 attttgctttttctagtagtgttg 16121836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 618313 - 618435
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  618313 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 618412  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  618413 attttgctttttctaatagtgtt 618435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 746988 - 746866
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  746988 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 746889  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||  |||||||    
T  746888 attttgctttttcttgtagtgtt 746866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 23408999 - 23409120
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggtttta-tttcttccgtcactatttttccttctt 167  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| || | ||||||||||| |||  ||| | ||| ||||||||||| |||| ||   |    
T  23408999 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgtcactaatttttctcgct 23409098  T
Q  168 aattttgctttttctattagtg 189  Q
    |||||||||||||||| |||||    
T  23409099 aattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 32726849 - 32726736
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    |||||||||||| |||||||| |||||||||| | |||||||||||| ||   ||| ||||||| | ||||||||| | |||| |||||| |||  || |    
T  32726849 agagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaatttcgctcc 32726750  T
Q  166 ttaattttgctttt 179  Q
     |||||||||||||    
T  32726749 ctaattttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 23975654 - 23975765
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  23975654 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 23975753  T
Q  169 attttgcttttt 180  Q
    ||||||||||||    
T  23975754 attttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 7003848 - 7003729
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| || | | | ||||||| |||  |||| ||| ||||||||||| ||| |||   ||    
T  7003848 gagggaaaacgtgaaat--ctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcactaatttccctcgcta 7003751  T
Q  169 attttgctttttctattagtgt 190  Q
    |||||| |||||||| ||||||    
T  7003750 attttgttttttctagtagtgt 7003729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 17079425 - 17079515
Alignment:
Q  70 agggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactattttt 160  Q
    ||||||||| | ||||  |||||||||| | |||||||||||| ||   |||||||||||||||| |||||||| ||||||| ||| ||||    
T  17079425 agggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtccctaatttt 17079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 10420375 - 10420286
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    ||||||||||||| ||||||  |||||||||||  |||||||||||| ||   || ||| |||| |||| |||||||| |||||||||||    
T  10420375 agagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcacta 10420286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 24138961 - 24138840
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| ||   ||| |||| ||||||||| | |||||||   ||    
T  24138961 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattttcctcgcta 24138862  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  24138861 attttgctttttctaatagtgt 24138840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 33818681 - 33818560
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| |  |    
T  33818681 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccca 33818582  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  33818581 attttgctttttctagtagtgt 33818560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 4125308 - 4125188
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| |||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  4125308 gagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 4125209  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  4125208 attttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 7888816 - 7888936
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||| | | |||||||||||||||   ||| ||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  7888816 gagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaataatttccctcgcta 7888915  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  7888916 attttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 17036535 - 17036411
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||  ||||  ||||||||||   |||||||||||| ||   ||| ||||||| |||  |||||||||||||||||||| | |  || |    
T  17036535 agagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctcgctcc 17036436  T
Q  166 ttaattttgctttttctattagtgt 190  Q
     ||||||||| ||||||| ||||||    
T  17036435 ctaattttgcattttctagtagtgt 17036411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 26708705 - 26708585
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||| ||||| ||| |||   ||    
T  26708705 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttccctcgcta 26708606  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||| ||||||| |||||    
T  26708605 attttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 26978439 - 26978319
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||| ||||| ||| |||   ||    
T  26978439 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttccctcgcta 26978340  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||| ||||||| |||||    
T  26978339 attttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 13620247 - 13620125
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||||||||||   |||| ||||||| ||   || |||||||| || | |||||||| ||||||||||| ||| ||| | |     
T  13620247 gagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaatttccctccctg 13620148  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||| ||||||||| |||||||    
T  13620147 atttttctttttctagtagtgtt 13620125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 27428135 - 27428089
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||    
T  27428135 agagagggaaaacgtgaaatccctctctaattccgtcactaaatttt 27428089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 2472834 - 2472714
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc-tt 167  Q
    |||||||||| ||||||  |||||||||| | ||| |||||||| ||   ||| ||||||| |||  ||| |||| |||||||||||  ||||||||  |    
T  2472834 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcacta-atttccttcact 2472736  T
Q  168 aattttgctttttctattagtg 189  Q
    |||||||||||||||| |||||    
T  2472735 aattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 10494756 - 10494877
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  10494756 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 10494855  T
Q  169 attttgctttttctattagtgt 190  Q
      ||||||||||||| ||||||    
T  10494856 catttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 15060992 - 15061105
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||| ||||||| ||| |||   ||    
T  15060992 gaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcactaatttccctcgcta 15061091  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  15061092 attttgctttttct 15061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 28265595 - 28265474
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||| |||| ||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  28265595 gagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 28265496  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||||||| ||||||    
T  28265495 attttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 35620463 - 35620343
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||   ||||||||| | |||||||||||| ||   ||| ||||||| | ||  ||||||| ||||||||||| ||| |||   ||    
T  35620463 gagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtga-ggaatttattttttccgtcactaatttccctcgcta 35620365  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  35620364 attttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 8886971 - 8886851
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| || |||||| | |||||||   ||    
T  8886971 gagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacaaattttcctcgcta 8886872  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  8886871 attttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 36597460 - 36597340
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||| ||||||||||   |||||||||||||||   ||| ||||||| |||  |||||| | ||||||||  | |||| || |  |    
T  36597460 gagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttctcccaa 36597361  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  36597360 attttgctttttctagtagtg 36597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 13615398 - 13615589
Alignment:
Q  37 aaggacaattataaaatagattgaaagaaagagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggt 136  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  13615398 aaggaaaattataaaataaattgaaagaaagagaaggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggt 13615497  T
Q  137 tttatttcttccgtcactatttttccttcttaattttgctttttctattagtgttgtcacattatacacggtgaaccaactgaagtgaaaca 228  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  13615498 tttatttcttccgtcactatttttctttcctaattttgctttttctaatagtgttgtcacattatacacagtgagccaactgaagtgaaaca 13615589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 46012848 - 46012728
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||||  |||||||||||| || | ||| ||||||| || | |||||||| ||||||||||| ||||||| | |     
T  46012848 gagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcctccctg 46012749  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  46012748 attttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 1628227 - 1628344
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||  |||| ||||| | |||  |||||||| |||| ||| || ||| ||| |    
T  1628227 agagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcattaatttccctcc 1628326  T
Q  166 ttaattttgctttttcta 183  Q
     ||||||| |||||||||    
T  1628327 ctaattttactttttcta 1628344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 5565737 - 5565858
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||   |||||||||||| ||   ||||||||||| || | |||||||| ||||||||||| ||| ||| | |     
T  5565737 gagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccctccctg 5565836  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  5565837 attttgctttttctagtagtgt 5565858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 10941785 - 10941665
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttacta 10941686  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  10941685 attttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 1311076 - 1310957
Alignment:
Q  72 ggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatt 171  Q
    ||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||||||||  |||||    
T  1311076 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcactaattttccttgctaatt 1310977  T
Q  172 ttgctttttctattagtgtt 191  Q
    |||||||||||| |||||||    
T  1310976 ttgctttttctagtagtgtt 1310957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 9652593 - 9652714
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||  || ||||||||| |||  ||| |||| ||||||||||| ||| |||    |    
T  9652593 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcca 9652692  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  9652693 attttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 13921340 - 13921461
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  13921340 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 13921439  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  13921440 attttgctttttctagtagtgt 13921461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 5744431 - 5744551
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  |||||| | ||||||||| | ||||||| | ||    
T  5744431 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcctcccta 5744530  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  5744531 attttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 5781390 - 5781510
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  |||||| | ||||||||| | ||||||| | ||    
T  5781390 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcctcccta 5781489  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  5781490 attttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 11007803 - 11007683
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| | |  ||| |||| ||||||||||| ||| ||||  ||    
T  11007803 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcactaatttcccttacta 11007704  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  11007703 attttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 23773492 - 23773612
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||||||||||||||| ||| ||||  ||    
T  23773492 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttcccttacta 23773591  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  23773592 attttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 29216007 - 29216127
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||||||| | ||    
T  29216007 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattttcctccata 29216106  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  29216107 attttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 31250100 - 31250223
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    |||||||||||||   ||||  ||||||||||   |||||||||||| ||   |||||||||||||||  |||||||| ||||||||||| | ||||| |    
T  31250100 agagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcactaatcttcctcc 31250199  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||||| ||||||| |||||    
T  31250200 ctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 8110354 - 8110476
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | ||| |||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  8110354 gagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 8110453  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  8110454 attttgctttttctagtagtgtt 8110476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 13905158 - 13905036
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| |||  ||   ||    
T  13905158 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgctctcta 13905059  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  13905058 attttgctttttctagtagtgtt 13905036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 49915466 - 49915576
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||  |||||||||||| |||| |||||| | ||||||||| | ||| |||  |||    
T  49915466 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcacaaatttccctcttta 49915565  T
Q  169 attttgctttt 179  Q
    ||||| |||||    
T  49915566 attttactttt 49915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 3461430 - 3461310
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc-tt 167  Q
    |||||||||||| ||||  |||||||||| | ||| |||||||| || | ||||||||||| |||  |||||||| ||| |||||||  ||||||||  |    
T  3461430 gagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcacta-atttccttcgct 3461332  T
Q  168 aattttgctttttctattagtg 189  Q
    |||||||||||||||| |||||    
T  3461331 aattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 25882585 - 25882706
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||||||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  25882585 gagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 25882684  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  25882685 attttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 5260952 - 5261072
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  5260952 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 5261051  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  5261052 attttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 8546265 - 8546373
Alignment:
Q  74 aaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatttt 173  Q
    ||||||||||||  |||||||||| | |||||||||||| || | | | ||||||| |||  ||| |||| ||||||||||| |||||||   |||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  174 gctttttct 182  Q
    |||||||||    
T  8546365 gctttttct 8546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 21816736 - 21816856
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  21816736 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 21816835  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  21816836 atttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 46942499 - 46942623
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  ||||||||||   |||||||||||| ||   |||||| |||| |||| ||| |||| ||| ||||||| ||| | | |    
T  46942499 agagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcactaatttccttcc 46942598  T
Q  166 ttaattttgctttttctattagtgt 190  Q
     |||||||| |||||||| ||||||    
T  46942599 ctaattttgatttttctagtagtgt 46942623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 48404875 - 48404995
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  48404875 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 48404974  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  48404975 attttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 20615466 - 20615359
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||| ||||||||||||||| ||||||||||   ||| |||||||||||   || |||||||| ||   |||||||| ||||||| ||| ||||||| |    
T  20615466 agagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctctaattttcctcc 20615367  T
Q  166 ttaatttt 173  Q
    ||||||||    
T  20615366 ttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 15064112 - 15063990
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  15064112 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 15064013  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||| ||| |||||||    
T  15064012 attttgcttttcctagtagtgtt 15063990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 19223466 - 19223584
Alignment:
Q  71 gggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaat 170  Q
    |||||||||| ||||  |||||||||| | |||||||||||||||   ||| ||||||| |||  ||| |||| ||||||||| | ||| |||   ||||    
T  19223466 gggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaccaatttccctcgctaat 19223565  T
Q  171 tttgctttttctattagtg 189  Q
    ||||||||||||| |||||    
T  19223566 tttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 19269984 - 19269862
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||| ||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  19269984 gagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 19269885  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  19269884 attttgctttttctaatagtgtt 19269862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 18539819 - 18539932
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||| | |||  ||| |||| ||||||||||| ||| |||   ||    
T  18539819 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcactaatttccctctcta 18539918  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  18539919 attttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 31433753 - 31433798
Alignment:
Q  70 agggaaaacgtgaaattgctctctaatttcatcactaaattttacg 115  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||    
T  31433753 agggaaaacgtgaaattcctctctaattccgtcactaaattttacg 31433798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 8428186 - 8428306
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||||||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  8428186 gagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 8428285  T
Q  169 attttgctttttctattagtg 189  Q
    |||||  |||||||| |||||    
T  8428286 attttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 19610353 - 19610473
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  19610353 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 19610452  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  19610453 attttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 26098828 - 26098948
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||| |||||| ||| |||   ||    
T  26098828 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccctcgcta 26098927  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  26098928 attttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 26830565 - 26830441
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggtttta-tttcttccgtcactatttttcctt 164  Q
    ||||||||||||||||||||  |||||||||| | |||| ||||||| ||   | | ||||||| |||  ||||| ||| |||||||| || |||||||     
T  26830565 agagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtcattaattttcctc 26830466  T
Q  165 cttaattttgctttttctattagtg 189  Q
    | ||||||| ||||||||| |||||    
T  26830465 cctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 27449103 - 27449223
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  27449103 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27449202  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  27449203 attttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 29236059 - 29236179
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||| ||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  29236059 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaatttccctcgcta 29236158  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  29236159 attttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 43329863 - 43329763
Alignment:
Q  89 tctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagt 188  Q
    ||||||||| | |||||||||||||||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||||||||||||||||| ||||    
T  43329863 tctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 43329764  T
Q  189 g 189  Q
    |    
T  43329763 g 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 11915773 - 11915892
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||| | |||  ||| || | ||||||||||| ||| |||   ||    
T  11915773 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaatttccctcgcta 11915872  T
Q  169 attttgctttttctattagt 188  Q
    ||||||||||||||| ||||    
T  11915873 attttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 17582421 - 17582330
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactattttt 160  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  |||||||| ||||||||||| ||||    
T  17582421 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaatttt 17582330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 11837334 - 11837288
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacg 115  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||    
T  11837334 gagggaaaacatgaaattcctctctaattccgtcactaaattttacg 11837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 18104650 - 18104528
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  18104650 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaataatttccctcgcta 18104551  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  18104550 attttgctttttctagtagtgtt 18104528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 23217331 - 23217285
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||    
T  23217331 agagagggaaaacgtgaaatccctctctaattccgtcactaaatttt 23217285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 28389988 - 28390082
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttcct 163  Q
    |||||||||||||||||   ||||||||| | |||||||||||| ||   ||  ||||||| || | |||||||| ||||||||||| |||||||    
T  28389988 gagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaattttcct 28390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 1745607 - 1745488
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  1745607 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt-ttccgtcactaatttccctcgcta 1745509  T
Q  169 attttgctttttctattagtg 189  Q
    |||||||||||| || |||||    
T  1745508 attttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 11219153 - 11219273
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | ||| |||||||| ||  || | ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  11219153 gagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcactaatttccctcgcta 11219252  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  11219253 attttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 16299876 - 16299996
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | |||  || | ||    
T  16299876 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttcgctcccta 16299975  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  16299976 attttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 17762657 - 17762777
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||  |   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  17762657 gagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 17762756  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| | |||||| |||||    
T  17762757 attttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 18091667 - 18091547
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||  |||||||||| | |||||||||||| ||   || |||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  18091667 gagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 18091568  T
Q  169 attttgctttttctattagtg 189  Q
    |||||||||||| || |||||    
T  18091567 attttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 18380039 - 18380159
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||| ||||| | ||||||||||||||| | ||||||||||| | |  ||| |||| ||||||||||  ||| |||   ||    
T  18380039 gagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcactgatttccctcgcta 18380138  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  18380139 attttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 19063977 - 19064097
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||  |   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  19063977 gagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 19064076  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| | |||||| |||||    
T  19064077 attttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 20762038 - 20761950
Alignment:
Q  101 tcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagtg 189  Q
    |||||||||||| ||   ||| ||||||| || | |||||||| ||||||||||| ||| ||| | | ||||||||||||||| |||||    
T  20762038 tcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 21020100 - 21020200
Alignment:
Q  89 tctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagt 188  Q
    ||||||||| | |||||||||||| |    ||| ||||||| || | |||||||| ||||||||||| ||| ||| | ||||||||||||| ||| ||||    
T  21020100 tctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctaattttgcttttcctagtagt 21020199  T
Q  189 g 189  Q
    |    
T  21020200 g 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 20429484 - 20429605
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||| |||    
T  20429484 gagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgtta 20429583  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  20429584 attttgctttttctagtagtgt 20429605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 25777235 - 25777112
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| | || |||||||| |||| ||||||||  |  ||||||| ||||| | |    
T  25777235 agagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcactaattttcttcc 25777136  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||| | ||||||| |||||    
T  25777135 ctaattttaccttttctagtagtg 25777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 11036526 - 11036647
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  11036526 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 11036625  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  11036626 attttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 48933160 - 48933277
Alignment:
Q  74 aaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatttt 173  Q
    ||||||||||||| |||||||||| | |||||||||||| ||   | | ||||||| |||  |||||||| ||||||||||| |||||||   |||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  174 gctttttctattagtgtt 191  Q
    |||||||||| |||||||    
T  48933260 gctttttctaatagtgtt 48933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 27806037 - 27806157
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||||||   ||| ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  27806037 gagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 27806136  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  27806137 attttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 22501610 - 22501725
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  |||||||||| | ||| |||||||| |||  ||  ||||||| |  | |||||||| ||||||||||| ||||| | |    
T  22501610 agagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtcactaattttcatcc 22501709  T
Q  166 ttaattttgctttttc 181  Q
    |||||||||| |||||    
T  22501710 ttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 1824320 - 1824198
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||  ||||||| |||||||||| | |||||||||||| ||   ||||||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  1824320 gagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 1824221  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||| ||| |||||||    
T  1824220 attttgcttttcctagtagtgtt 1824198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 20174039 - 20174169
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  20174039 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 20174138  T
Q  169 attttgctttttctattagtgttgtcacatt 199  Q
    ||||||||||| ||  |||||||||| ||||    
T  20174139 attttgcttttcctggtagtgttgtcccatt 20174169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 1842913 - 1843034
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  ||| |||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  1842913 gagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 1843012  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  1843013 attttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 3904598 - 3904477
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||  |||  ||| |||| ||||||||||| ||| |||   ||    
T  3904598 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccctcgcta 3904499  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  3904498 attttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 15014525 - 15014404
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  |||||||| ||||||||| | ||| |||   ||    
T  15014525 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcaccaatttccctcgcta 15014426  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||||||| ||||||    
T  15014425 attttactttttctagtagtgt 15014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 22486416 - 22486533
Alignment:
Q  72 ggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatt 171  Q
    ||||||||||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   |||||    
T  22486416 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 22486515  T
Q  172 ttgctttttctattagtg 189  Q
    |||||||||||| |||||    
T  22486516 ttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 32267363 - 32267479
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||  ||||  ||||||||||   |||||||||||| || | ||||||||||| |||| |||||||| ||||||||||| | | ||| |    
T  32267363 agagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttattt-ttccgtcactaatctccctcc 32267461  T
Q  166 ttaattttgctttttcta 183  Q
     ||||||||| |||||||    
T  32267462 ctaattttgcattttcta 32267479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 1907374 - 1907494
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||||| |||||||||||| ||   ||  ||| ||| |||| |||||||| ||||||||||| ||| |||   ||    
T  1907374 gagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccctcgcta 1907473  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  1907474 attttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 18217848 - 18217968
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||| ||||  |||||||||||| |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  18217848 gaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 18217947  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  18217948 attttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 21917454 - 21917334
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  21917454 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 21917355  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  21917354 attttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 28800897 - 28801017
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||| ||||||| ||| |||   ||    
T  28800897 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcactaatttccctcgcta 28800996  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  28800997 attttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 38057651 - 38057773
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||| ||||| | |||||||| ||| ||   ||| ||||||| |||  |||||||| |||| |||||| |||||||  ||     
T  38057651 gagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcactaattttcctcgttg 38057750  T
Q  169 attttgctttttctattagtgtt 191  Q
    |||||||||||| || |||||||    
T  38057751 attttgctttttgtagtagtgtt 38057773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 9698658 - 9698537
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | ||||||||||||| |   ||| ||||||| | |  ||| |||  ||||||||||| ||| |||   ||    
T  9698658 gagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaatttccctcgcta 9698559  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  9698558 attttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 37135405 - 37135284
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||   | | ||||| | |||  ||| |||| ||||||||||| ||| |||   ||    
T  37135405 gagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcactaatttccctcacta 37135306  T
Q  169 attttgctttttctattagtgt 190  Q
    |||||| |||||||| ||||||    
T  37135305 attttgttttttctagtagtgt 37135284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 3872307 - 3872187
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | ||||||||||||  |   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  3872307 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 3872208  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  3872207 attttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 6849331 - 6849211
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||| ||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  ||| ||||  |||||||||| ||| |||   ||    
T  6849331 gaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcactaatttccctcgcta 6849232  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  6849231 attttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 20924078 - 20923958
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||||||||||   ||||||||||||  |   || ||||||||||| | |||||||| |||| |||||| ||| ||| | ||    
T  20924078 gagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaatttccctccata 20923979  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  20923978 attttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 21623040 - 21623159
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| |||||||||||  ||||| ||       
T  21623040 gagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcacta-atttccctcgct 21623138  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  21623139 attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 23539251 - 23539371
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||| |||||||||  |||||||||| | ||| |||||||| ||  || | ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  23539251 gagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 23539350  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  23539351 attttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 36993839 - 36993959
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||| ||||||  || ||||||| | |||||||||||||||  |||||||||||| |||  |||||| | |||| |||| | ||| ||| | ||    
T  36993839 gaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaatttccctcccta 36993938  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  36993939 attttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 26415440 - 26415554
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||| ||||||| ||||  |||| ||||||| ||||||||||||||| | || |||||||| ||   |||||||| |||| ||||||  ||||||||    
T  26415440 agagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatcacta-atttccttc 26415538  T
Q  166 t-taattttgcttttt 180  Q
    | ||||||| ||||||    
T  26415539 tctaattttacttttt 26415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 42926540 - 42926417
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggtttta-tttcttccgtcactatttttccttctt 167  Q
    |||| ||||| ||||||  |||||||||| | |||||||||||| ||  |||||||||||| |||  ||| | ||| ||||||||||| |||||||   |    
T  42926540 gaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtcactaattttcctcgct 42926441  T
Q  168 aattttgctttttctattagtgtt 191  Q
    ||||||  |||||||| |||||||    
T  42926440 aattttattttttctagtagtgtt 42926417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 15969803 - 15969849
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacg 115  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||    
T  15969803 gagggaaaacatgaaattcctctctaattccgtcactaaattttacg 15969849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 26577284 - 26577394
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||  | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||||| ||    
T  26577284 gagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttcccttccta 26577383  T
Q  169 attttgctttt 179  Q
    |||||||||||    
T  26577384 attttgctttt 26577394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 33427709 - 33427755
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacg 115  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||    
T  33427709 gagggaaaacatgaaattcctctctaattccgtcactaaattttacg 33427755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 2650948 - 2650827
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| |||||||||||  || |||   ||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcacta 2650849  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||||||| ||||||    
T  2650848 atttttctttttctagtagtgt 2650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 14786755 - 14786634
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| || | ||||| | |||||||||||| ||   || |||||||| |||  ||| |||| ||| ||||||| |||||||   ||    
T  14786755 gagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcacta 14786656  T
Q  169 attttgctttttctattagtgt 190  Q
    |||||| |||||||| ||||||    
T  14786655 attttgttttttctaatagtgt 14786634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 39979744 - 39979623
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||| |||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  39979744 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 39979645  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||| ||| ||||||    
T  39979644 attttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 23232058 - 23232178
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  || ||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  23232058 gagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 23232157  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  23232158 attttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 23750856 - 23750736
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||| | |||||||||||||||   ||| ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  23750856 gagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgcta 23750757  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  23750756 attttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 24605857 - 24605977
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   |     
T  24605857 gagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgctg 24605956  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  24605957 atttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 27304895 - 27304999
Alignment:
Q  75 aaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttg 174  Q
    |||||||| ||  |||||||||| | |||||||||||| |||  ||| |||||||  ||| |||||||| ||| ||||||| ||| ||| | ||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  175 ctttt 179  Q
     ||||    
T  27304995 ttttt 27304999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 15961527 - 15961406
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | | |||||||||| || | |||||||||||||||  ||| |||| ||||||||||| ||| |||  |||    
T  15961527 gagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccctcgtta 15961428  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  15961427 attttgctttttctagtagtgt 15961406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 12351709 - 12351586
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||| |||||||||| | ||| |||||||| ||  |||| ||||||| |||  |||||||| ||||||||||| ||| ||| |    
T  12351709 agagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcactaatttccctcc 12351610  T
Q  166 ttaattttgctttttctattagtg 189  Q
    |||||| | ||||||||| |||||    
T  12351609 ttaattatactttttctagtagtg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 16250922 - 16250802
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||   |||||||||||| || | | ||||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  16250922 gagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 16250823  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  16250822 attttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 13668117 - 13668051
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaag 132  Q
    ||||||||||||||||||||| | |||||||| ||||| ||||||||||| | ||||||||||||||    
T  13668117 agagagggaaaacgtgaaattcccctctaattccatcattaaattttacgataaagaaatttgtaag 13668051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 33250828 - 33250707
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  33250828 gagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 33250729  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||  ||||||| ||||||    
T  33250728 attttgtcttttctagtagtgt 33250707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 495747 - 495627
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  495747 gagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 495648  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  495647 attttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 6605616 - 6605496
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||| ||||| ||  |||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  6605616 gagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 6605517  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  6605516 attttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 9892982 - 9893102
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  9892982 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9893081  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  9893082 attttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 15448404 - 15448524
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | ||| |||||||| || ||||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  15448404 gagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 15448503  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  15448504 attttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 20182164 - 20182284
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| || | | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  20182164 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 20182263  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  20182264 attttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 22153827 - 22153707
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| || | | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  22153827 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 22153728  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  22153727 attttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 5360428 - 5360547
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   || |||||||| |||  |||||||| ||||||||||| ||| |||   ||    
T  5360428 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgcta 5360527  T
Q  169 attttgctttttctattagt 188  Q
    ||||||||||||||| ||||    
T  5360528 attttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 12157440 - 12157382
Alignment:
Q  125 tttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttcta 183  Q
    |||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  12157440 tttgtaagggattttattttttccgtcactaatttccctccttaattttgctttttcta 12157382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 12680307 - 12680194
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||| |||||||||| | ||| ||||||||||| | ||  |||| || ||   |||||||| |||||||||||  |||||| |    
T  12680307 agagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcacta-atttcctcc 12680209  T
Q  166 ttaattttgcttttt 180  Q
    |||||||| ||||||    
T  12680208 ttaatttttcttttt 12680194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 21140958 - 21141072
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||  |||  ||| |||| ||||||||||| ||| |||  |||    
T  21140958 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcactaatttccctcgtta 21141057  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  21141058 attttgctttttcta 21141072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 6065456 - 6065577
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||||  |||||| |||||||||||  ||| |||||||| || | ||  ||||||| || | |||||||| |||||||| || ||||||| | ||    
T  6065456 gagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcctcccta 6065555  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||| ||| ||||||    
T  6065556 attttgcttttcctaatagtgt 6065577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 11049871 - 11049750
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  11049871 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 11049772  T
Q  169 attttgctttttctattagtgt 190  Q
    |||||| |||||||| ||||||    
T  11049771 attttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 11530244 - 11530365
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||   ||||||||| | ||||||||||||||| ||||||||||| | ||   |||||| | ||||||||| | ||| ||| | ||    
T  11530244 gagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcacaaatttccctcccta 11530343  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||| ||| ||||||    
T  11530344 attttgcttttcctaatagtgt 11530365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 14886580 - 14886693
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||  |||||||||| | |||||||||||||||   ||  ||| ||| |||| |||||||| ||| ||||||| ||||||| | ||    
T  14886580 gagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtcactaattttcctcccta 14886679  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  14886680 attttgctttttct 14886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 6598483 - 6598603
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  6598483 gagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 6598582  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  6598583 attttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 9060115 - 9060231
Alignment:
Q  75 aaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttg 174  Q
    |||| ||||||| ||||||||||   |||||||||||| ||   || |||||||| |||| |||||||| ||||||||||| |||  ||  |||||||||    
T  9060115 aaacatgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaatttcgctctttaattttg 9060214  T
Q  175 ctttttctattagtgtt 191  Q
    ||||||||  |||||||    
T  9060215 ctttttcttatagtgtt 9060231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 26224447 - 26224567
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||||||||||||  |   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  26224447 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 26224546  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  26224547 attttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 2669333 - 2669448
Alignment:
Q  74 aaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatttt 173  Q
    ||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| || |||||||| ||| |||  ||||||||    
T  2669333 aaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcactaatttccctcgttaatttt 2669432  T
Q  174 gctttttctattagtg 189  Q
    |||||||||| |||||    
T  2669433 gctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 5192309 - 5192194
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||||||   ||  ||||||| |||  ||| |||| |||| |||||| |||||||   ||    
T  5192309 gagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcctcgcta 5192210  T
Q  169 attttgctttttctat 184  Q
    ||||||||||||||||    
T  5192209 attttgctttttctat 5192194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 12200713 - 12200827
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||  ||||||  |||||||||| | |||||||||||||||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  12200713 gagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 12200812  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  12200813 attttgctttttcta 12200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 5270408 - 5270457
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacg 115  Q
    |||||||||||| |||||||| |||||||||| | |||||||||||||||    
T  5270408 agagagggaaaatgtgaaattcctctctaattccgtcactaaattttacg 5270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 15364578 - 15364457
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||   ||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  15364578 gagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 15364479  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  15364478 attttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 24661129 - 24661008
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||| |||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  24661129 gagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 24661030  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  24661029 attttgctttttctagtagtgt 24661008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 28364930 - 28365051
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  28364930 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 28365029  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  28365030 attttgctttttctagtagtgt 28365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 9885262 - 9885382
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||| ||||||  |||||||||||| |    || |||||||| || | |||||||| ||||||||||| ||| ||| | |     
T  9885262 gagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaatttccctccctg 9885361  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  9885362 attttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 12205306 - 12205191
Alignment:
Q  68 agagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctt 167  Q
    ||||||||||||||||||  ||| |||||| | ||||||||||||||| || |  ||||||| ||   ||| || | ||||||||||| |||  |||| |    
T  12205306 agagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcct 12205207  T
Q  168 aattttgctttttcta 183  Q
    |||||| |||||||||    
T  12205206 aattttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 33636999 - 33637058
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttg 128  Q
    |||||||||| | ||||| |||| ||||||||||| ||||||||||| | ||||||||||    
T  33636999 gagggaaaacataaaatttctctataatttcatcattaaattttacgatcaagaaatttg 33637058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 12845019 - 12845065
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||    
T  12845019 agagagggaaaacgtgaaatctctctctaattccgtcactaaatttt 12845065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 21691619 - 21691573
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    ||||||| ||||||||||||  |||||||||||| ||||||||||||    
T  21691619 agagaggaaaaacgtgaaatccctctctaatttcgtcactaaatttt 21691573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 25398021 - 25398135
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  25398021 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 25398120  T
Q  169 attttgctttttcta 183  Q
    ||||| |||||||||    
T  25398121 atttttctttttcta 25398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 30745840 - 30745777
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaa 131  Q
    ||||||||||||||||||||  |||||||| | | ||||||||||||||| | || ||||||||||    
T  30745840 agagagggaaaacgtgaaat--ctctctaagtccgtcactaaattttacgatcaaaaaatttgtaa 30745777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 6978300 - 6978417
Alignment:
Q  73 gaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattt 172  Q
    |||||| ||||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||||| |||| ||| |||   ||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  173 tgctttttctattagtgt 190  Q
    ||||||| ||| ||||||    
T  6978400 tgcttttcctaatagtgt 6978417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 12160966 - 12160846
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||  |||||||||||| |||||||||||| || | || |||||||| |||  ||| |||| || |||||||| ||| |||   ||    
T  12160966 gagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttccctcgcta 12160868  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||||||| ||||||    
T  12160867 attttactttttctagtagtgt 12160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 21990294 - 21990174
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | ||||||| |||| ||   ||||||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  21990294 gagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcattt-ttccgtcattaatttccctcgcta 21990196  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  21990195 attttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 22083857 - 22083978
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||| ||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  22083857 gagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 22083956  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||| ||| ||||||    
T  22083957 attttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 2992634 - 2992754
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||||| |||| |||||| ||| |||   ||    
T  2992634 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcactaatttccctcgcta 2992733  T
Q  169 attttgctttttctattagtg 189  Q
    ||| ||||||| ||| |||||    
T  2992734 attatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 26939606 - 26939726
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||  ||||||| ||| |||   ||    
T  26939606 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttccctcagta 26939705  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  26939706 attttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 38531293 - 38531168
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||| ||  |||| ||||||| |||  |||||||| ||||||||||  ||| ||| |    
T  38531293 agagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcacttatttccctcc 38531194  T
Q  166 ttaattttgctttttctattagtgtt 191  Q
     ||||||| ||||||||| |||||||    
T  38531193 ctaattttactttttctagtagtgtt 38531168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 46865259 - 46865384
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||| ||||||||||  |||||||||| ||| |||||||||| |||  ||||||||||| |||| |||||||| ||||||||||| ||| ||| |    
T  46865259 agagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaatttccctcc 46865358  T
Q  166 ttaattttgctttttctattagtgtt 191  Q
     || |||| ||||||||| |||||||    
T  46865359 ctagtttttctttttctagtagtgtt 46865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 17661069 - 17661189
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||   | ||||||||| |||  |||||||| ||||||||||| ||| | |  |||    
T  17661069 gagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaatttccgtcgtta 17661168  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  17661169 attttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 26825256 - 26825373
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||| | ||  ||||||| ||||   |||||| ||||||||||| ||||| | |    
T  26825256 agagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttcttcc 26825355  T
Q  166 ttaattttgctttttcta 183  Q
     ||| |||||||||||||    
T  26825356 ataactttgctttttcta 26825373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 41063235 - 41063337
Alignment:
Q  88 ctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattag 187  Q
    |||||||||| | |||||||||||| || | ||  ||| ||| |||| |||||||| ||||||||||| ||||||||||||||||| ||||||||| |||    
T  41063235 ctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcactaattttccttcttaattttactttttctagtag 41063334  T
Q  188 tgt 190  Q
    |||    
T  41063335 tgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 16913700 - 16913587
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||| ||||||  |||||||||| | | | |||||||||||  |||| ||||||| |||  |||||||| ||||||||||| ||| |||||    
T  16913700 agagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtcactaatttcccttc 16913601  T
Q  166 ttaattttgctttt 179  Q
     |||||||||||||    
T  16913600 ctaattttgctttt 16913587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 46339564 - 46339444
Alignment:
Q  70 agggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaa 169  Q
    ||||||||| ||||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  ||| |||| ||||||||||| |||||||   |||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 46339465  T
Q  170 ttttgctttttctattagtgt 190  Q
    |||||||||||||| ||||||    
T  46339464 ttttgctttttctagtagtgt 46339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 52183697 - 52183817
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  |||||||| |||||||| || ||| |||  |||    
T  52183697 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcattaatttccctcgtta 52183796  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  52183797 attttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 28229575 - 28229452
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  28229575 gagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 28229476  T
Q  169 attttgctttttctattagtgttg 192  Q
    ||||||||||||||| ||||||||    
T  28229475 attttgctttttctagtagtgttg 28229452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 4340426 - 4340548
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  4340426 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 4340525  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  4340526 attttgctttttctaatagtgtt 4340548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 41120857 - 41120736
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| |||| |||||| ||| |||   ||    
T  41120857 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaatttccctcgcta 41120758  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||||||||||    
T  41120757 attttgctttttctattagtgt 41120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 8941114 - 8940994
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | || |||||||||||| | ||| ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  8941114 gagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgcta 8941015  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  8941014 attttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 9110095 - 9109975
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  9110095 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9109996  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  9109995 attttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 12720828 - 12720948
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||||| ||||||||||| ||| |||   ||    
T  12720828 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcactaatttccctcgcta 12720927  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  12720928 attttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 22603567 - 22603687
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| |||| ||||||||||| | |||||||||||| || | ||  ||||||| |||  ||| |||| |||| |||||| ||| ||||  ||    
T  22603567 gagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcactaatttcccttgcta 22603666  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  22603667 attttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 45839311 - 45839431
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  45839311 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 45839410  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  45839411 attttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 9259303 - 9259184
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| ||   |||| ||| ||||||||||| |||||||  |||    
T  9259303 gagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcactaattttcctcgtta 9259204  T
Q  169 attttgctttttctattagt 188  Q
    |||||| |||||||| ||||    
T  9259203 attttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 23457916 - 23458038
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| |||||||| || |||||||   ||    
T  23457916 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattttcctcgcta 23458015  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||| ||||||||| |||||||    
T  23458016 attttactttttctagtagtgtt 23458038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 50845450 - 50845329
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  50845450 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 50845351  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  50845350 attttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 12161833 - 12161953
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| |||||||| || |||||||   ||    
T  12161833 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattttcctcgcta 12161932  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  12161933 attttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 20408280 - 20408160
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | | |||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  20408280 gagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 20408181  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  20408180 attttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 6412173 - 6412050
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||| ||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| |||||| |||| ||| |||   ||    
T  6412173 gagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttccctcgcta 6412074  T
Q  169 attttgctttttctattagtgttg 192  Q
    ||||||||||||||| ||||||||    
T  6412073 attttgctttttctagtagtgttg 6412050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 19865263 - 19865385
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| ||   ||| |||| ||||||||||| |||||||   ||    
T  19865263 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcctcgcta 19865362  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||| ||||||||| |||||||    
T  19865363 attttactttttctagtagtgtt 19865385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 6459236 - 6459357
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  6459236 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 6459335  T
Q  169 attttgctttttctattagtgt 190  Q
    |||| |||||||||| ||||||    
T  6459336 atttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 9882157 - 9882069
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactattttt 160  Q
    |||| ||||| | ||||| |||||||||| | |||||||||||| ||   ||||||||||| |||| |||||||| ||||||||||| ||||    
T  9882157 gaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaatttt 9882069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 29549437 - 29549557
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||  ||  ||| |||||||| ||   |||||||| || |||||||| ||| |||   ||    
T  29549437 gagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcactaatttccctcgcta 29549536  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  29549537 attttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 48522537 - 48522657
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| ||||  |||| | |||||||||||| ||   || |||||||| ||   |||||||| ||| ||||||| |||||||   ||    
T  48522537 gagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctcgcta 48522636  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  48522637 attttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 50092418 - 50092298
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||||||||||||  | | | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  50092418 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 50092319  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  50092318 atttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 19081744 - 19081867
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  ||||||||||   |||||||||||||||   ||| ||||||| ||   |||||||| |||| |||||| ||| |||      
T  19081744 agagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctct 19081843  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||| |||||| || |||||    
T  19081844 ctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 19129632 - 19129755
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  ||||||||||   |||||||||||||||   ||| ||||||| ||   |||||||| |||| |||||| ||| |||      
T  19129632 agagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctct 19129731  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||| |||||| || |||||    
T  19129732 ctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 3786416 - 3786462
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    |||||||||||| |||||||| ||||||||||| ||| |||||||||    
T  3786416 agagagggaaaatgtgaaattcctctctaatttaatcgctaaatttt 3786462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 13523084 - 13523038
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaatttt 112  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||    
T  13523084 agagagggaaaacgtgaaatccctctctaattccgtcactaaatttt 13523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 15243104 - 15243190
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    |||||||||||||||||  || ||||||| | |||||||||||| || | ||| ||||||| |||  ||| |||| |||||||||||    
T  15243104 gagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcacta 15243190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 20290436 - 20290327
Alignment:
Q  73 gaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattt 172  Q
    |||||||||||||   ||||||||| | ||||||||||||||||  | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||||||    
T  20290436 gaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcattt-ttccgtcactaatttccctcgctaattt 20290338  T
Q  173 tgctttttcta 183  Q
    | |||||||||    
T  20290337 tactttttcta 20290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 30928494 - 30928388
Alignment:
Q  73 gaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattt 172  Q
    |||||| ||||||| ||||||||||   |||||||||||| ||   ||| ||||||| || | |||||||| ||||||||||| ||| |||   ||||||    
T  30928494 gaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaattt 30928395  T
Q  173 tgctttt 179  Q
    |||||||    
T  30928394 tgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 14760886 - 14761007
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||| |||||| | |||||||||||| ||   ||  ||||||| |||  |||||| | ||||||||| | ||| |||  |||    
T  14760886 gagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaatttccctcttta 14760985  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  14760986 attttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 22158821 - 22158934
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||| ||||||| ||| |||   ||    
T  22158821 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcactaatttccctcgcta 22158920  T
Q  169 attttgctttttct 182  Q
    ||||| ||||||||    
T  22158921 attttactttttct 22158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 9177119 - 9177239
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||| ||||  |||| ||||||| |||||||||||| ||   ||||||||||| |||  ||| |||| |||||| |||| ||| |||   ||    
T  9177119 gaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttccctcgcta 9177218  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  9177219 attttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 9985447 - 9985327
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||| ||||  |||||||||| | ||| |||||||||||   ||  ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  9985447 gaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcactaatttcccttgcta 9985348  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  9985347 attttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 13308940 - 13308820
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||| ||||||  ||||||||||||||||||||||||| ||   || |||||||| |||  |||||||| ||| | ||||| ||| |||   ||    
T  13308940 gaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccctctcta 13308841  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||| ||| |||||    
T  13308840 attttgtttttcctagtagtg 13308820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 25788098 - 25787998
Alignment:
Q  88 ctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattag 187  Q
    |||||||||| | |||||||||||| ||   | | ||||||| |||  |||| ||| ||||||||||| |||||||   ||||||||||||||||| |||    
T  25788098 ctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttttctagtag 25787999  T
Q  188 t 188  Q
    |    
T  25787998 t 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 19256229 - 19256350
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  |||||||| ||||||||||| ||| |||  |||    
T  19256229 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatttccctcgtta 19256328  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  19256329 attttgctttttctagtagtgt 19256350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 17810315 - 17810435
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||||| |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  17810315 gagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 17810414  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  17810415 attttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 17003276 - 17003400
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||| |||||||||||||||    ||| ||||||||  | | ||| ||||| | ||||||||||||| ||||  ||||| ||||||| |    
T  17003276 agagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctcc 17003375  T
Q  166 ttaattttgctttttctattagtgt 190  Q
     ||||||||||||||||| ||||||    
T  17003376 ctaattttgctttttctagtagtgt 17003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 9631423 - 9631542
Alignment:
Q  72 ggaaaacgtgaaattgctctctaatttca-tcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaat 170  Q
    ||||||||||||||| |||||||||| |  |||||||||||| ||  ||   ||||||| |||  |||||||| ||||||||||| ||||||||  ||||    
T  9631423 ggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcactaattttccttgctaat 9631522  T
Q  171 tttgctttttctattagtgt 190  Q
    ||||||||||||| ||||||    
T  9631523 tttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 29345085 - 29345208
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  ||| |||||| | |||||||||||| |   |||||||||||| |  | |||||||| ||||||||||| ||| ||| |    
T  29345085 agagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcactaatttccctcc 29345184  T
Q  166 ttaattttgctttttctattagtg 189  Q
     ||||||| ||||||||| |||||    
T  29345185 ctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 24636669 - 24636791
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| || | ||||||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  24636669 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 24636768  T
Q  169 attttgct-ttttctattagtgt 190  Q
    |||||||| ||||||| ||||||    
T  24636769 attttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 19240884 - 19241005
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  19240884 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 19240983  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  19240984 attttgctttttctagtagtgt 19241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 19314068 - 19314189
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  19314068 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 19314167  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  19314168 attttgctttttctagtagtgt 19314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 30467074 - 30466953
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||||||||| | |||  ||||| || ||||||||||| ||| |||   ||    
T  30467074 gagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaatttccctcgcta 30466975  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  30466974 attttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 4330995 - 4331115
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||| |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  4330995 gagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 4331094  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  4331095 attttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 4647875 - 4647754
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| |||||||  |||||||||| | |||||||||||| ||  || ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  4647875 gagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 4647776  T
Q  169 attttgctttttctattagtgt 190  Q
    |||||| |||||||| ||||||    
T  4647775 attttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 19488181 - 19488060
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||  ||||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  19488181 gagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 19488082  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  19488081 attttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 35678154 - 35678065
Alignment:
Q  94 aatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttcta 183  Q
    |||||| |||| ||||||||||  |||| ||||||| | || |||||||| |||| ||| || ||||||| |||||||||||||||||||    
T  35678154 aatttcgtcaccaaattttacgaataaggaatttgtgatggattttattttttccttcattaattttcctccttaattttgctttttcta 35678065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 6817071 - 6817191
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||| | ||||||||||||  |   ||||||||||| |||  ||| |||| ||||||||||  ||||||||  ||    
T  6817071 gagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactgattttccttgcta 6817170  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  6817171 attttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 24193316 - 24193196
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  24193316 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 24193217  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  24193216 attttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 24576144 - 24576024
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  24576144 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 24576045  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  24576044 attttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 25655978 - 25655858
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||  ||||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  25655978 gagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 25655879  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  25655878 attttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 27910884 - 27910764
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||||||||||||  |  |||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  27910884 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27910785  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  27910784 attttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 27957303 - 27957183
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | ||||||||||||  |  |||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  27957303 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27957204  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  27957203 attttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 37992116 - 37992226
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||  |||  ||| ||| | || |||||| | ||||||||||| ||||||| | ||    
T  37992116 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtcactaattttcctcccta 37992215  T
Q  169 attttgctttt 179  Q
    |||||||||||    
T  37992216 attttgctttt 37992226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 13061051 - 13060930
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||||||||||   |||||||||||| ||  |||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  13061051 gagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacctcgcta 13060952  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||| ||| ||||||    
T  13060951 attttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 18010180 - 18010067
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| || | ||| ||||||| |||  ||| |||| ||||||||||| |||  ||   ||    
T  18010180 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgcta 18010081  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  18010080 attttgctttttct 18010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 22939330 - 22939450
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc-tt 167  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||||||||||  ||||||||  |    
T  22939330 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcacta-atttccttcact 22939428  T
Q  168 aattttgctttttctattagtg 189  Q
    |||||||||||||||| |||||    
T  22939429 aattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 11938762 - 11938881
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  11938762 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt-ttccgtcactaatttccctcgcta 11938860  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  11938861 attttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 43431679 - 43431559
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||||| |||||||||||| |    ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  43431679 gagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 43431580  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  43431579 atttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 6084299 - 6084244
Alignment:
Q  136 ttttatttcttccgtcactatttttccttcttaattttgctttttctattagtgtt 191  Q
    |||||||| ||||||||||| |||  || | |||||||||||||||||||||||||    
T  6084299 ttttattttttccgtcactaatttatctccctaattttgctttttctattagtgtt 6084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 10917863 - 10917965
Alignment:
Q  88 ctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattag 187  Q
    |||||||||| | |||||||||||| |  | ||||||||| | |||  |||||| | ||||||||| | ||| ||| | ||||||||||||||||| |||    
T  10917863 ctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagtag 10917962  T
Q  188 tgt 190  Q
    |||    
T  10917963 tgt 10917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 26399127 - 26399041
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   ||  ||||||| || | |||||||| |||||||||||    
T  26399127 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcacta 26399041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 5879221 - 5879302
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgt 150  Q
    |||| ||||||| ||||  |||||||||| | |||||||||||||||   ||||||||||| |||  |||||||| ||||||    
T  5879221 gaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 21350515 - 21350616
Alignment:
Q  89 tctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagt 188  Q
    ||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  | ||||||||||||||| ||||    
T  21350515 tctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgcttattttgctttttctagtagt 21350614  T
Q  189 gt 190  Q
    ||    
T  21350615 gt 21350616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 27869255 - 27869376
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| |||| |||||| ||| |||   ||    
T  27869255 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttccctcgcta 27869354  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  27869355 attttgctttttctagtagtgt 27869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 31344295 - 31344234
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaattt 127  Q
    |||||||||||| |||||||| |||||||||| | ||| |||||||| || | |||||||||    
T  31344295 agagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaattt 31344234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 8555424 - 8555304
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  8555424 gagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 8555325  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  8555324 attttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 17824736 - 17824616
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  |||||| | ||||||||| | ||| |||   ||    
T  17824736 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaatttccctctcta 17824637  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  17824636 attttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 32175857 - 32175736
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  |||||||| ||||||||||| ||| |||  |||    
T  32175857 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatttccctcgtta 32175758  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  32175757 attttgctttttctagtagtgt 32175736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 4586878 - 4586756
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | ||||||||||||||| | ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  4586878 gagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 4586779  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  4586778 attttgctttttctagtagtgtt 4586756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 45532699 - 45532578
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | ||| |||||||| || | ||||||||||| |||  ||| |||| ||||||||||| ||| |||  |||    
T  45532699 gagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgtta 45532600  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  45532599 attttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 30420149 - 30420033
Alignment:
Q  73 gaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattt 172  Q
    |||||| ||||||| |||||||||||| |||||||||  | ||   ||| ||||||||| |  |||||||| ||||||||||| ||||||| | ||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  173 tgctttttctattagtg 189  Q
    ||||||||||| |||||    
T  30420049 tgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 54539303 - 54539423
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||| ||||| | |||||||||||| ||  |||| ||||||| |||  ||| |||| ||||||||||| ||||||||  ||    
T  54539303 gagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttccttgcta 54539402  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  54539403 attttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 4627198 - 4627079
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||||| ||||||||||||||| | ||||||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  4627198 gagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaatttccctcgcta 4627099  T
Q  169 attttgctttttctattagt 188  Q
    ||||||||||||||| ||||    
T  4627098 attttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 9913272 - 9913395
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    ||||||||||||||||||||  ||||||||||   |||||||||||| ||   |||||| |||| |||| ||| |||| ||||||||||| ||||||| |    
T  9913272 agagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcctcc 9913371  T
Q  166 ttaattttgctttttctattagtg 189  Q
     |||||||  |||||||| |||||    
T  9913372 ctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 9238745 - 9238619
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  9238745 gagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9238646  T
Q  169 attttgctttttctattagtgttgtca 195  Q
    |||||||||||| || ||||| |||||    
T  9238645 attttgctttttttagtagtgatgtca 9238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 46286349 - 46286228
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  |||||||| ||||||||||| ||| | |   ||    
T  46286349 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaatttccgtcacta 46286250  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  46286249 attttgctttttctagtagtgt 46286228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 27040145 - 27040025
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  |||| ||| ||||||||||| ||| |||   ||    
T  27040145 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcactaatttccctcgcta 27040046  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  27040045 attttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 4606949 - 4606827
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| |||||||  |||||||||| | |||||||||||| |||  ||||||||||| |  | ||||||||  |||||||||| ||| ||| | ||    
T  4606949 gagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccctcccta 4606850  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||| ||||| ||| |||||||    
T  4606849 attttacttttcctagtagtgtt 4606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 16915386 - 16915508
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||  ||||||  |||||||||||  |||||||||||| ||   || |||||||| || | |||||||| |||| |||||| ||||||| | |     
T  16915386 gagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattttcctccctg 16915485  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||||||| |||||||    
T  16915486 attttgctttttctagtagtgtt 16915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 22128432 - 22128310
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||   |||||||||||| ||   ||| ||||||| || | |||||||| ||||||||||| ||| ||| | |     
T  22128432 gagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctg 22128333  T
Q  169 attttgctttttctattagtgtt 191  Q
    |||||| |||||||| |||||||    
T  22128332 attttgttttttctagtagtgtt 22128310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 13028936 - 13028815
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||  |||| ||||||||||| |||||||   ||    
T  13028936 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattttcctcgcta 13028837  T
Q  169 attttgctttttctattagtgt 190  Q
    | ||||||||||||| ||||||    
T  13028836 agtttgctttttctagtagtgt 13028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 9670599 - 9670479
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  9670599 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9670500  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  9670499 atttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 29625342 - 29625462
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||  || | ||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  29625342 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccctcgcta 29625441  T
Q  169 attttgctttttctattagtg 189  Q
    |||||||||||| ||||||||    
T  29625442 attttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 25026574 - 25026697
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||  |||| ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  25026574 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaatttccctcacta 25026673  T
Q  169 attttgctttttctattagtgttg 192  Q
    ||||| ||||||||| ||||||||    
T  25026674 attttactttttctaatagtgttg 25026697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 24682446 - 24682328
Alignment:
Q  70 agggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaa 169  Q
    ||||||||||||||||  |||||||||| || ||||||||||| ||   | | ||||||| |||  |||||||| |||||||| || ||| ||| | |||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaa 24682347  T
Q  170 ttttgctttttctattagt 188  Q
    |||| ||||||||| ||||    
T  24682346 tttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 7112066 - 7111941
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||| ||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  7112066 gagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 7111967  T
Q  169 attttgctttttctattagtgttgtc 194  Q
    ||||||||||||||| ||||| ||||    
T  7111966 attttgctttttctagtagtgatgtc 7111941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 13565035 - 13564914
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | ||||||||||||| |   ||| ||||||| | |  ||| |||  ||||||||||| ||| |||   ||    
T  13565035 gagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaatttccctcgcta 13564936  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  13564935 attttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 1638464 - 1638584
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| ||| |||||| | |||||||||||| ||   ||  ||| ||| |||| |||||||| ||||||||||| ||| ||| | ||    
T  1638464 gagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccctcccta 1638563  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||| ||| |||||    
T  1638564 attttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 19839196 - 19839316
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  19839196 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgcta 19839295  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  19839296 attttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 22168285 - 22168405
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||| |||||||||| |  ||||||||||| ||   ||| ||||| | |||  ||| |||| ||||||||||| ||| |||   ||    
T  22168285 gagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcactaatttccctcgcta 22168384  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  22168385 attttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 55309333 - 55309210
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggtttta-tttcttccgtcactatttttccttctt 167  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| | ||| ||||||||||| ||| |||   |    
T  55309333 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatttccctcgct 55309234  T
Q  168 aattttgctttttctattagtgtt 191  Q
    |||||||||||||||| |||||||    
T  55309233 aattttgctttttctagtagtgtt 55309210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 2275798 - 2275712
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| || | ||| ||||||| |||  ||| |||| |||||||||||    
T  2275798 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcacta 2275712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 3613009 - 3613051
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaa 108  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||    
T  3613009 agagaggaaaaacgtgaaattcctctctaatttcgtcactaaa 3613051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 19680544 - 19680422
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   | ||||||||| |||  ||| |||| |||||||||||  || |||   ||    
T  19680544 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcacta 19680445  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||| ||||||||| |||||||    
T  19680444 atttttctttttctagtagtgtt 19680422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 37378743 - 37378629
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| |||||||| || |||||||   ||    
T  37378743 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaataattttcctcgcta 37378644  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  37378643 attttgctttttcta 37378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 38223524 - 38223613
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    ||||||||||||||  ||||  ||||||||||   |||||||||||| ||   ||| |||||||||||  |||||||| |||||||||||    
T  38223524 agagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcacta 38223613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 5399626 - 5399746
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| |    ||| ||||||| |||  |||||| | ||||||||| | ||||||| | ||    
T  5399626 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtcacaaattttcctcccta 5399725  T
Q  169 attttgctttttctattagtg 189  Q
    | ||||||||| ||| |||||    
T  5399726 agtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 18744190 - 18744146
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaatttta 113  Q
    |||||||||||||||||  |||||||||| | |||||||||||||    
T  18744190 gagggaaaacgtgaaatccctctctaattccgtcactaaatttta 18744146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 30508004 - 30508124
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||||| || ||||||   |||||||   ||    
T  30508004 gagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcctcgcta 30508103  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  30508104 attttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 10783 - 10669
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||  |||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  10783 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 10684  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  10683 attttgctttttcta 10669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 18609529 - 18609651
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||||||| || ||||||| || | ||| ||||||| |||| || |||||  |||||||||| ||||||| ||||    
T  18609529 gagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaattttcctcctta 18609628  T
Q  169 attttgctttttctattagtgtt 191  Q
     |||| ||||| ||| |||||||    
T  18609629 tttttacttttcctaatagtgtt 18609651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 15636855 - 15636742
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||||| |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  15636855 gagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 15636756  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  15636755 attttgctttttct 15636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 43408631 - 43408510
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  43408631 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcacta 43408532  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  43408531 attttgctttttctagtagtgt 43408510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 8430311 - 8430431
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | ||||||||||||||| | |  |||||||| |||  |||||||| ||||||||||| ||| ||    ||    
T  8430311 gagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcactaatttcccccgcta 8430410  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  8430411 attttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 12779615 - 12779735
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||||| |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  12779615 gagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 12779714  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  12779715 attttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 18551373 - 18551253
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| | ||||  |||||||||| | |||||||||||| || ||||| ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  18551373 gagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 18551274  T
Q  169 attttgctttttctattagtg 189  Q
    |||||||||||| || |||||    
T  18551273 attttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 29749523 - 29749403
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||| |||||| | |||||||||||| ||   ||||||||||| |||  |||||| | ||||||||| | ||| ||||| ||    
T  29749523 gagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttcccttccta 29749424  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  29749423 attttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 41736187 - 41736307
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||||| |||||||||||| || | ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  41736187 gagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 41736286  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  41736287 attttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 2556107 - 2556232
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttc 165  Q
    |||||||||||| ||||||||  ||||||||| | ||||||||||||||    ||||||||||| ||   |||||||| |||| |||||| |||||||      
T  2556107 agagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctct 2556206  T
Q  166 ttaattttgctttttctattagtgtt 191  Q
     ||||||| |||||| || |||||||    
T  2556207 ctaattttactttttttagtagtgtt 2556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 14757241 - 14757120
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||||| |||  ||| |||| |||||||| || ||||| |   ||    
T  14757241 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttcttcgcta 14757142  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  14757141 attttgctttttctagtagtgt 14757120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 26243441 - 26243320
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||| ||||| |||||||||| | |||||||||||||||   ||  ||||||| |||  |||||||| | ||| ||||| ||| |||  |||    
T  26243441 gaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccctcgtta 26243342  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  26243341 attttgctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 22140480 - 22140364
Alignment:
Q  73 gaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattt 172  Q
    |||||||||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| ||| |||  |||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgttaattt 22140381  T
Q  173 tgctttttctattagtg 189  Q
    ||||||||||| |||||    
T  22140380 tgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 32185847 - 32185967
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||   | ||||||||  |||  ||| |||| ||||||||||| ||| |||   ||    
T  32185847 gagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcactaatttccctcgcta 32185946  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  32185947 attttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 41637633 - 41637753
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  41637633 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 41637732  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  41637733 attttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 28319699 - 28319580
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  28319699 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 28319600  T
Q  169 attttgctttttctattagt 188  Q
    ||||||||||||||| ||||    
T  28319599 attttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 18916520 - 18916411
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  ||||||||||   |||||||||||| || | || |||||||| |||| |||||||| |||||||| || ||| ||| | ||    
T  18916520 gagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttattt-ttccgtcagtaatttccctgccta 18916422  T
Q  169 attttgctttt 179  Q
    |||||||||||    
T  18916421 attttgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 32008967 - 32009089
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttctt-ccgtcactatttttccttctt 167  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| || ||||||||| |||||||   |    
T  32008967 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaattttcctcgct 32009066  T
Q  168 aattttgctttttctattagtgt 190  Q
    |||||||||||||||| ||||||    
T  32009067 aattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 1141551 - 1141664
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||   |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  1141551 gagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 1141650  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  1141651 attttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 13788175 - 13788054
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||||| |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||  ||| |||   ||    
T  13788175 gagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactgatttccctcgcta 13788076  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  13788075 attttgctttttctagtagtgt 13788054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 32300466 - 32300579
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||| ||   | | ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  32300466 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 32300565  T
Q  169 attttgctttttct 182  Q
    ||||||||||||||    
T  32300566 attttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 7093583 - 7093703
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||||  |||||||||||| ||   || |||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  7093583 gagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 7093682  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  7093683 attttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 20065194 - 20065074
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||| ||||||||||||  ||||||||||   |||||||||||| ||   | ||||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  20065194 gaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 20065095  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  20065094 attttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 21293831 - 21293711
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||   | | ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  21293831 gagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcactaatttccctcgcta 21293732  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  21293731 attttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 30783353 - 30783473
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  |||||| | ||||||||| | ||| ||||| ||    
T  30783353 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtcacaaatttcccttccta 30783452  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  30783453 attttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 44722966 - 44723069
Alignment:
Q  88 ctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattag 187  Q
    |||||||||| | |||||||||||| ||  |||| |||||||||||  ||| |||| |||| ||| || ||| |||   ||||||||||||||||| |||    
T  44722966 ctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttccctcgctaattttgctttttctagtag 44723065  T
Q  188 tgtt 191  Q
    ||||    
T  44723066 tgtt 44723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 27327631 - 27327753
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||| ||||| | |||||||||||| ||  |||| ||||||| |||  |||||| | ||||||||| | ||| | | | ||    
T  27327631 gagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcacaaatttccatcccta 27327730  T
Q  169 attttgctttttctattagtgtt 191  Q
    ||||||||||| ||| |||||||    
T  27327731 attttgcttttcctagtagtgtt 27327753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 40018871 - 40018937
Alignment:
Q  123 aatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagtg 189  Q
    ||||||||||   |||||||| ||||||||||| ||| |||| ||||||||| |||||||| |||||    
T  40018871 aatttgtaagaaattttattttttccgtcactaatttccctttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 13134743 - 13134654
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcacta 155  Q
    ||||| ||||||| ||||||  || ||||||||  ||| |||||||||||  ||| ||| |||| |||| |||||||| |||||||||||    
T  13134743 agagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcacta 13134654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 44476492 - 44476375
Alignment:
Q  72 ggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaatt 171  Q
    ||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| | |  ||| |||| ||||||||||| ||| |||   |||||    
T  44476492 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaatt 44476393  T
Q  172 ttgctttttctattagtg 189  Q
    |||||||||||| |||||    
T  44476392 ttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 27039996 - 27039908
Alignment:
Q  101 tcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaattttgctttttctattagtg 189  Q
    |||||||||||| ||   ||||||||||| |||  ||| |||| ||||||||||| ||| |||   ||||||||||||||||| |||||    
T  27039996 tcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 28841460 - 28841340
Alignment:
Q  71 gggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttcttaat 170  Q
    |||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||||| |||| ||| |||   ||||    
T  28841460 gggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttccctcgctaat 28841361  T
Q  171 tttgctttttctattagtgtt 191  Q
    ||||||||| ||| |||||||    
T  28841360 tttgcttttcctagtagtgtt 28841340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 19622 - 19743
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  19622 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 19721  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  19722 attttgctttttctagtagtgt 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 3761 - 3882
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| |||||||   ||    
T  3761 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 3860  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  3861 attttgctttttctagtagtgt 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 202793 - 202913
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||| |||||||||| | |||||||||||| ||   ||| ||||||| ||   ||| |||| ||||||||||| ||| |||   ||    
T  202793 gagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccctcgcta 202892  T
Q  169 attttgctttttctattagtg 189  Q
    ||||| ||||||||| |||||    
T  202893 atttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 439982 - 440103
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| || ||||  |||||||||| | |||||||||||| || | ||||||||||| |||  ||| |||| ||||||||||| | ||||||  ||    
T  439982 gagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattccttgcta 440081  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||||||| ||||||    
T  440082 attttactttttctagtagtgt 440103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 6099 - 5979
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  6099 gagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 6000  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  5999 attttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 22230 - 22350
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||  |||| ||||||| |||  ||| |||| || |||||||| ||| |||   ||    
T  22230 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaatttccctcgcta 22329  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  22330 attttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 219655 - 219775
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | | |||||||||| || |||| |||||||| |||  ||| |||| ||||||||||| ||| | |   ||    
T  219655 gagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttccgtcgcta 219754  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  219755 attttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 84322 - 84442
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    ||||||||| |||||||  |||||||||| | ||||||||||||  |   | ||||||||| |||  ||| |||| ||||||||||| ||| ||||  ||    
T  84322 gagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgcta 84421  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||||||| |||||    
T  84422 attttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 8230 - 8116
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  8230 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttccctcgcta 8131  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  8130 attttgctttttcta 8116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 21962 - 21848
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| |||||||| || ||| |||   ||    
T  21962 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttccctcgcta 21863  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  21862 attttgctttttcta 21848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 3283 - 3161
Alignment:
Q  68 agagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctt 167  Q
    ||||||||||||||||||  ||| ||||||   |||||||||||| ||   | ||||||||| |||   ||||| | ||||||||||| ||| ||| | |    
T  3283 agagggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctccct 3184  T
Q  168 aattttgctttttctattagtgt 190  Q
    |||||| ||||||||||||||||    
T  3183 aatttttctttttctattagtgt 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 10177 - 10287
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| || ||||  ||||||| |||  |||||| | ||||||||| | ||| ||| | ||    
T  10177 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtcacaaatttccctcccta 10276  T
Q  169 attttgctttt 179  Q
    |||||||||||    
T  10277 attttgctttt 10287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 84794 - 84680
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| ||   ||| ||||||| |||  ||| |||| ||| ||||||| ||| |||   ||    
T  84794 gagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccctcacta 84695  T
Q  169 attttgctttttcta 183  Q
    |||||||||||||||    
T  84694 attttgctttttcta 84680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 121110 - 121047
Alignment:
Q  66 agagagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgt 129  Q
    ||||||||||||||||||||  |||||||||| | |||||||||||| ||   |||||||||||    
T  121110 agagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgt 121047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 9349 - 9228
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||   ||||||||| | |||||||||||| ||   ||| ||||||| |||  ||| |||| ||||||||||| ||| |||   ||    
T  9349 gagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 9250  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  9249 attttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 15110 - 14989
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||| | |||  ||| |||| ||| ||||||| ||| |||   ||    
T  15110 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaatttccctcgcta 15011  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  15010 attttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 37907 - 37787
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   |  |||||||| |||  |||||||| ||||||||||| ||| || |  ||    
T  37907 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtcactaatttcccctgcta 37808  T
Q  169 attttgctttttctattagtg 189  Q
    |||||| |||||||| |||||    
T  37807 attttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 58601 - 58721
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||| | |||  |||||| | ||||||||| | ||| ||| | ||    
T  58601 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtcacaaatttccctcccta 58700  T
Q  169 attttgctttttctattagtg 189  Q
    ||||||||||| ||| |||||    
T  58701 attttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 7524 - 7643
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||||||||| | |||  ||| || | ||||||||||| ||| |||   ||    
T  7524 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaatttccctcgcta 7623  T
Q  169 attttgctttttctattagt 188  Q
    ||||||||||||||| ||||    
T  7624 attttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 7475 - 7589
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||||||||  ||||||||||   |||||||| ||| ||  |||| | ||||| | |  ||| |||| ||||||||||| |||||||  |||    
T  7475 gagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcactaattttcctcgtta 7574  T
Q  169 attttgctttttcta 183  Q
    ||||| |||||||||    
T  7575 attttactttttcta 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 26502 - 26623
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||||| ||||  |||||||||| | |||||||||||| ||   ||  ||||||| |||  ||| |||| ||||||||||| ||| | |   ||    
T  26502 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccgtcacta 26601  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||||||||||||| ||||||    
T  26602 attttgctttttctagtagtgt 26623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 74661 - 74540
Alignment:
Q  69 gagggaaaacgtgaaattgctctctaatttcatcactaaattttacggttaagaaatttgtaaggggttttatttcttccgtcactatttttccttctta 168  Q
    |||||||||| ||||||  |||||||||| | |||||||||||| ||   ||||||||| | |||  |||||| | ||||||||| | ||| ||| | ||    
T  74661 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcacaaatttccctcccta 74562  T
Q  169 attttgctttttctattagtgt 190  Q
    ||||| ||||| ||| ||||||    
T  74561 attttacttttcctagtagtgt 74540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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