View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6104_high_3 (Length: 251)
Name: NF6104_high_3
Description: NF6104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6104_high_3 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 8920119 - 8920357
Alignment:
| Q |
13 |
aatatagtgatagaccaacacagcctagtcattttgaaagactcttctggattcacaagcagttcacatttagaaaggcattctcctcttcaaaccatgg |
112 |
Q |
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| T |
8920119 |
aatatagtgatagaccaacatagcctagtcattttcaaagactcttctggattcacaagcagttcacatttagaaaggcattctcctcttcaaaccatgg |
8920218 |
T |
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| Q |
113 |
atagagaatagaataaaatcaagttaaatcttatcataagaatgtggggaatactatgatagtcaattcaatctaaagcttggatgggaattgatttgtg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
8920219 |
atagagaatagaataaaatcaagttaaatcttatcataagaatgtgtggaatactatgatagtcaattcaatctaaagcttggacgggaattgatttgtg |
8920318 |
T |
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| Q |
213 |
atgtgatcagttttagtctaattcatttttacacgaaat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
8920319 |
atgtgatcagttttagtctaattcatttttacacgaaat |
8920357 |
T |
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