View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6104_low_5 (Length: 237)

Name: NF6104_low_5
Description: NF6104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6104_low_5
NF6104_low_5
[»] chr4 (30 HSPs)
chr4 (1-64)||(7949415-7949478)
chr4 (8-64)||(47386752-47386808)
chr4 (1-64)||(8030165-8030228)
chr4 (1-64)||(9693459-9693522)
chr4 (1-64)||(12448760-12448822)
chr4 (5-41)||(17777055-17777091)
chr4 (1-41)||(23378008-23378048)
chr4 (8-64)||(28635755-28635811)
chr4 (8-64)||(49262645-49262701)
chr4 (8-55)||(4185152-4185199)
chr4 (17-64)||(12793872-12793919)
chr4 (8-63)||(21660106-21660161)
chr4 (8-63)||(21668870-21668925)
chr4 (8-55)||(22096578-22096625)
chr4 (1-64)||(27965464-27965527)
chr4 (1-64)||(37274420-37274483)
chr4 (1-55)||(19531972-19532026)
chr4 (1-55)||(31826661-31826715)
chr4 (4-46)||(38740897-38740939)
chr4 (1-63)||(51622537-51622599)
chr4 (1-46)||(49576873-49576918)
chr4 (1-41)||(7292782-7292822)
chr4 (150-210)||(17441850-17441910)
chr4 (4-52)||(34835576-34835624)
chr4 (8-52)||(34844860-34844904)
chr4 (1-41)||(37109335-37109375)
chr4 (8-60)||(39509129-39509181)
chr4 (8-52)||(40058954-40058998)
chr4 (8-52)||(49287909-49287953)
chr4 (8-64)||(51954173-51954229)
[»] chr3 (36 HSPs)
chr3 (1-64)||(52769944-52770007)
chr3 (8-64)||(2667921-2667977)
chr3 (1-64)||(8075088-8075151)
chr3 (7-64)||(15034402-15034459)
chr3 (8-60)||(30510164-30510216)
chr3 (1-64)||(14339662-14339725)
chr3 (8-63)||(36720440-36720495)
chr3 (2-64)||(10499070-10499132)
chr3 (1-46)||(14186699-14186744)
chr3 (11-64)||(36015510-36015563)
chr3 (4-48)||(1884057-1884101)
chr3 (8-60)||(13448382-13448434)
chr3 (1-41)||(20501748-20501788)
chr3 (8-64)||(32639004-32639060)
chr3 (8-60)||(33899673-33899725)
chr3 (1-41)||(37788449-37788489)
chr3 (1-48)||(4222193-4222240)
chr3 (9-64)||(51903839-51903894)
chr3 (1-43)||(32651420-32651462)
chr3 (1-42)||(11642192-11642233)
chr3 (7-52)||(40133551-40133596)
chr3 (7-64)||(40777070-40777127)
chr3 (2-63)||(54414269-54414329)
chr3 (1-41)||(3427537-3427577)
chr3 (4-64)||(7973611-7973671)
chr3 (7-55)||(8170730-8170778)
chr3 (8-64)||(10445100-10445156)
chr3 (8-52)||(15566601-15566645)
chr3 (8-52)||(25289816-25289860)
chr3 (1-41)||(34622525-34622565)
chr3 (1-41)||(40063671-40063711)
chr3 (8-64)||(44743816-44743872)
chr3 (8-52)||(49258364-49258408)
chr3 (1-41)||(51222174-51222214)
chr3 (8-52)||(52821737-52821781)
chr3 (1-64)||(54990754-54990817)
[»] chr8 (32 HSPs)
chr8 (1-64)||(11819828-11819891)
chr8 (1-64)||(7347889-7347952)
chr8 (1-64)||(44780075-44780138)
chr8 (1-55)||(19703457-19703511)
chr8 (1-55)||(23361619-23361673)
chr8 (1-63)||(33727835-33727897)
chr8 (1-55)||(43594288-43594342)
chr8 (1-64)||(6536572-6536635)
chr8 (1-64)||(40791856-40791919)
chr8 (1-63)||(27750782-27750844)
chr8 (10-60)||(45527616-45527666)
chr8 (1-42)||(35690047-35690088)
chr8 (17-61)||(3129828-3129872)
chr8 (16-60)||(16025652-16025696)
chr8 (8-64)||(16852399-16852455)
chr8 (8-64)||(18546323-18546379)
chr8 (7-63)||(36034483-36034539)
chr8 (8-63)||(968421-968476)
chr8 (2-41)||(3174789-3174828)
chr8 (8-63)||(11492035-11492090)
chr8 (7-41)||(13456495-13456529)
chr8 (1-63)||(31408084-31408146)
chr8 (1-63)||(43292398-43292460)
chr8 (7-60)||(3624638-3624690)
chr8 (10-63)||(44595817-44595870)
chr8 (150-210)||(3060290-3060350)
chr8 (8-52)||(4698825-4698869)
chr8 (8-64)||(8485058-8485114)
chr8 (1-41)||(18540350-18540390)
chr8 (7-63)||(21566744-21566800)
chr8 (1-41)||(33017266-33017306)
chr8 (2-42)||(42740547-42740587)
[»] chr5 (21 HSPs)
chr5 (1-64)||(17028225-17028288)
chr5 (8-64)||(16773866-16773922)
chr5 (1-64)||(28285304-28285367)
chr5 (8-63)||(29173549-29173604)
chr5 (7-64)||(35705044-35705101)
chr5 (1-41)||(25627109-25627149)
chr5 (7-63)||(37229059-37229115)
chr5 (4-51)||(12669527-12669574)
chr5 (1-64)||(12877745-12877808)
chr5 (1-64)||(22020823-22020886)
chr5 (1-64)||(43442248-43442311)
chr5 (10-64)||(21589349-21589403)
chr5 (7-41)||(26078035-26078069)
chr5 (14-63)||(4793042-4793091)
chr5 (11-64)||(29075843-29075896)
chr5 (8-52)||(7085728-7085772)
chr5 (1-41)||(14285213-14285253)
chr5 (1-41)||(25979222-25979262)
chr5 (8-52)||(30485879-30485923)
chr5 (7-63)||(37235979-37236035)
chr5 (1-41)||(37258350-37258390)
[»] chr2 (22 HSPs)
chr2 (1-64)||(33582025-33582088)
chr2 (1-55)||(11251139-11251193)
chr2 (1-63)||(21195638-21195700)
chr2 (8-60)||(39764992-39765044)
chr2 (1-64)||(1435116-1435178)
chr2 (1-64)||(21213821-21213884)
chr2 (12-55)||(41138382-41138425)
chr2 (1-55)||(7918181-7918235)
chr2 (1-63)||(8162027-8162089)
chr2 (10-63)||(6859274-6859327)
chr2 (10-62)||(37971956-37972008)
chr2 (1-41)||(40416374-40416414)
chr2 (1-64)||(23052484-23052547)
chr2 (8-63)||(33569820-33569875)
chr2 (1-64)||(38854423-38854486)
chr2 (1-41)||(4060198-4060238)
chr2 (1-41)||(11062412-11062452)
chr2 (7-55)||(19244167-19244215)
chr2 (1-41)||(21303978-21304018)
chr2 (15-63)||(27244374-27244422)
chr2 (8-52)||(36242414-36242458)
chr2 (8-52)||(41314043-41314087)
[»] chr1 (30 HSPs)
chr1 (1-64)||(6122846-6122909)
chr1 (9-63)||(44961825-44961879)
chr1 (13-63)||(3799970-3800020)
chr1 (2-60)||(40814373-40814431)
chr1 (1-46)||(6650647-6650692)
chr1 (8-64)||(12587329-12587384)
chr1 (8-64)||(17745218-17745273)
chr1 (8-64)||(44126454-44126510)
chr1 (1-64)||(10526875-10526938)
chr1 (2-41)||(50920007-50920046)
chr1 (1-60)||(51814546-51814605)
chr1 (1-63)||(52116743-52116805)
chr1 (1-55)||(52336744-52336798)
chr1 (1-42)||(29753701-29753742)
chr1 (1-42)||(33700756-33700797)
chr1 (1-41)||(1600276-1600316)
chr1 (8-64)||(2220031-2220087)
chr1 (1-41)||(2799914-2799954)
chr1 (150-210)||(4874933-4874993)
chr1 (8-52)||(8077698-8077742)
chr1 (8-52)||(8254854-8254898)
chr1 (8-52)||(9500457-9500501)
chr1 (1-41)||(11063608-11063648)
chr1 (8-52)||(15059504-15059548)
chr1 (1-41)||(15786304-15786344)
chr1 (8-64)||(16893453-16893509)
chr1 (8-52)||(18646904-18646948)
chr1 (10-42)||(28283592-28283624)
chr1 (9-41)||(42858621-42858653)
chr1 (8-64)||(44370841-44370897)
[»] chr7 (33 HSPs)
chr7 (1-64)||(21558180-21558243)
chr7 (1-64)||(30579387-30579450)
chr7 (1-64)||(37473666-37473729)
chr7 (1-64)||(41519226-41519288)
chr7 (8-63)||(41975946-41976001)
chr7 (1-60)||(42712010-42712069)
chr7 (11-63)||(33181172-33181224)
chr7 (7-55)||(48983703-48983751)
chr7 (1-64)||(15137605-15137668)
chr7 (1-64)||(27313695-27313758)
chr7 (1-64)||(43590959-43591022)
chr7 (1-63)||(279916-279978)
chr7 (7-64)||(4572258-4572315)
chr7 (15-64)||(45228986-45229035)
chr7 (1-41)||(9608613-9608653)
chr7 (1-41)||(9836185-9836225)
chr7 (8-64)||(15905635-15905691)
chr7 (1-64)||(9183152-9183215)
chr7 (1-64)||(11720921-11720984)
chr7 (1-64)||(17040973-17041036)
chr7 (1-64)||(29385704-29385767)
chr7 (2-41)||(33222423-33222462)
chr7 (1-64)||(41487411-41487474)
chr7 (1-51)||(2883002-2883052)
chr7 (8-46)||(23945920-23945958)
chr7 (1-63)||(48771990-48772052)
chr7 (11-64)||(26199571-26199624)
chr7 (7-61)||(29196963-29197019)
chr7 (8-64)||(7309415-7309470)
chr7 (1-41)||(7721421-7721461)
chr7 (8-52)||(22703541-22703585)
chr7 (1-41)||(26459394-26459434)
chr7 (1-41)||(39631896-39631936)
[»] chr6 (18 HSPs)
chr6 (1-64)||(20213093-20213156)
chr6 (1-64)||(22107116-22107179)
chr6 (17-63)||(1992209-1992255)
chr6 (8-63)||(3715511-3715566)
chr6 (1-64)||(11103396-11103459)
chr6 (8-63)||(12234469-12234524)
chr6 (1-64)||(18263892-18263955)
chr6 (8-63)||(33549163-33549218)
chr6 (1-63)||(6385914-6385976)
chr6 (1-46)||(14278090-14278135)
chr6 (8-64)||(6758383-6758439)
chr6 (1-63)||(14199909-14199971)
chr6 (10-64)||(21418531-21418585)
chr6 (7-45)||(24256802-24256840)
chr6 (6-56)||(33456622-33456672)
chr6 (8-53)||(12216803-12216848)
chr6 (1-41)||(4105103-4105143)
chr6 (8-52)||(11448922-11448966)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-46)||(45738-45783)
[»] scaffold0300 (1 HSPs)
scaffold0300 (4-64)||(4395-4455)
[»] scaffold0258 (1 HSPs)
scaffold0258 (8-64)||(15284-15340)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-64)||(42625-42688)
[»] scaffold0126 (1 HSPs)
scaffold0126 (7-64)||(25308-25365)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-41)||(2695-2735)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-41)||(19946-19986)
[»] scaffold0118 (1 HSPs)
scaffold0118 (8-64)||(41594-41650)


Alignment Details
Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7949478 - 7949415
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  7949478 ctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 47386808 - 47386752
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  47386808 aggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8030228 - 8030165
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  8030228 ctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9693522 - 9693459
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||  |||||||    
T  9693522 ctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12448760 - 12448822
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||| |||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||    
T  12448760 ctcctcaagatctcaggttcgattctctttagtgccaattta-gtgagctaatttagcttcttc 12448822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 17777055 - 17777091
Alignment:
Q  5 ttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17777055 ttaaggtctcagattcgattctctctagtgtcaattt 17777091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23378008 - 23378048
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  23378008 ctcctcaaggtctcaggttcgattctctctagtgccaattt 23378048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 28635755 - 28635811
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||||||||||||||| ||| |||||| |||| |||||||| ||||||||    
T  28635755 aggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 49262701 - 49262645
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||| | |||| ||||||||||| |||||||| | ||||||    
T  49262701 aggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 4185152 - 4185199
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    |||||||| | ||||||||| |||||||||||||||||| ||||||||    
T  4185152 aggtctcaagatcgattctccctagtgtcaatttaggtgggctaattt 4185199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 12793919 - 12793872
Alignment:
Q  17 gttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||| ||| ||||||||||| |||||||| ||||||||    
T  12793919 gttcgattctctctggtgccaatttaggtgggctaatttagcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21660161 - 21660106
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||| |||||||| ||||||||||||||||||||   ||||||| |||||||    
T  21660161 aggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21668925 - 21668870
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||| |||||||| ||||||||||||||||||||   ||||||| |||||||    
T  21668925 aggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 22096625 - 22096578
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    |||||||||||||||||||| |||||| ||||||| ||| ||||||||    
T  22096625 aggtctcaggttcgattctccctagtgccaatttaagtgggctaattt 22096578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27965527 - 27965464
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||||||| ||||||||||||||| |||| ||||| ||| ||||||||  |||||||    
T  27965527 ctccttgaggtctcaagttcgattctctctaatgtcgatttaagtgggctaatttaccttcttc 27965464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37274483 - 37274420
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||| |||||||||||||||| |||  |||||| ||| |||||||| ||||||||    
T  37274483 ctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19532026 - 19531972
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||||||| | ||||||||||||||||||  || ||||||||||| ||||||||    
T  19532026 ctccttaagttttcaggttcgattctctctgatgccaatttaggtgggctaattt 19531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31826661 - 31826715
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||| ||||||||| ||||||||| || |||||||||||| |||| ||||||||    
T  31826661 ctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtgggctaattt 31826715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 38740897 - 38740939
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    |||||||||||||||||||||| |||| |||||||||| ||||    
T  38740897 cttaaggtctcaggttcgattccctctggtgtcaatttcggtg 38740939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51622537 - 51622599
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| |||||||||||||||| ||||||| ||| |||||| |||| || ||||| |||||||    
T  51622537 ctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49576918 - 49576873
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    ||||| ||||||||||||||||||||||| | ||||||||| ||||    
T  49576918 ctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtg 49576873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7292822 - 7292782
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| || ||||||||||||||||||||||||| ||||||    
T  7292822 ctcctcaaagtctcaggttcgattctctctagtgccaattt 7292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 17441850 - 17441910
Alignment:
Q  150 tttcataaagtaaacccaagtcattctagaaaaatcatcaatgaagagaatgaaatacttg 210  Q
    ||||| ||| |||||||||||||| || | |||||||||||| || ||||| |||||||||    
T  17441850 tttcagaaaataaacccaagtcatccttgtaaaatcatcaataaaaagaataaaatacttg 17441910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 34835576 - 34835624
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||| ||||||||| |||| |||||||||| |||| |||||    
T  34835576 cttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaa 34835624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 34844904 - 34844860
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 34844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37109375 - 37109335
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  37109375 ctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 39509129 - 39509181
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||||| | |||| ||||||||||| | |||||| ||||    
T  39509129 aggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40058998 - 40058954
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  40058998 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 40058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 49287909 - 49287953
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  49287909 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 49287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 51954173 - 51954229
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||| |||| ||||  |||||||||| |||| |||||||| ||||||||    
T  51954173 aggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52770007 - 52769944
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  52770007 ctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 2667921 - 2667977
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  2667921 aggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagcttcttc 2667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8075151 - 8075088
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  8075151 ctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 15034402 - 15034459
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||| |||||| || ||| |||||| ||||||||||||||||||||||    
T  15034402 aaggtctcaggttcaattctccctggtgccaatttcggtgagctaattttgcttcttc 15034459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 30510216 - 30510164
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||| ||||    
T  30510216 aggtctcaggttcgattctctctagtgtcaatctaagtgggctaatttagctt 30510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14339662 - 14339725
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || |||||||||||||||||| |||||| ||||| ||||| |||||||| ||||||||    
T  14339662 ctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 14339725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 36720440 - 36720495
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||| |||||||||||||||||||||||||||||||||| |||  ||| |||||||    
T  36720440 aggtttcaggttcgattctctctagtgtcaatttaggtgggctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10499132 - 10499070
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||||||   ||||||||| |||| |||||||| ||||||||    
T  10499132 tccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14186699 - 14186744
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  14186699 ctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtg 14186744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 36015510 - 36015563
Alignment:
Q  11 tctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| |||||||||   ||||||||||||||| |||||||||||||||||    
T  36015510 tctcaggtacgattctcttcggtgtcaatttaggtgggctaattttgcttcttc 36015563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1884057 - 1884101
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtgag 48  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||    
T  1884057 cttaaggtctcagattcgaatctctctcgtgtcaatttaggtgag 1884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 13448382 - 13448434
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    ||||||||||||| ||| |||||| |||||||||||||| |||||||| ||||    
T  13448382 aggtctcaggttcaattttctctactgtcaatttaggtgggctaatttagctt 13448434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20501748 - 20501788
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  20501748 ctccttaaggtctcaggttcgattctctccagtgccaattt 20501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 32639004 - 32639060
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||| |||| |||||||||||| |||  ||||||||| ||||||    
T  32639004 aggtctcaggttcgattttctccagtgtcaatttaagtggcctaattttgtttcttc 32639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 33899673 - 33899725
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||||| ||||    
T  33899673 aggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagctt 33899725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37788489 - 37788449
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  37788489 ctcctcaaggtctcaggttcgattctctctagtgccaattt 37788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4222193 - 4222240
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgag 48  Q
    ||||| || |||| |||||||||||||||| |||||||||||||||||    
T  4222193 ctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgag 4222240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 51903894 - 51903839
Alignment:
Q  9 ggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||||  ||||||||||  ||| |||||||| ||||||||    
T  51903894 ggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32651462 - 32651420
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttag 43  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||    
T  32651462 ctcctcaagatctcagattcgattctctctagtgtcaatttag 32651420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11642233 - 11642192
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattta 42  Q
    ||||| |||||||||||||||||| ||| |||||||||||||    
T  11642233 ctcctcaaggtctcaggttcgattatctttagtgtcaattta 11642192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 40133596 - 40133551
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||| |||| |||||||||| |||| |||||    
T  40133596 aaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 40133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 40777070 - 40777127
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||| |||||||||||||| |||||| |||| |||| ||| | ||||||    
T  40777070 aaggtctcaggtttgattctctctagtgccaatttcggtgggctagtttagtttcttc 40777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 54414269 - 54414329
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||| |||||||||||| |  |||||||||  ||||||||||| |||||||    
T  54414269 tccttaaggtctcagattcgattctctcca-agtcaatttaaatgagctaatttagcttctt 54414329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3427577 - 3427537
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  3427577 ctcctcaaggtctcagattcgattctctctagtgccaattt 3427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 7973611 - 7973671
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| | ||||||||||||||||  ||||||||| ||||  ||||||| ||||||||    
T  7973611 cttaaggttttaggttcgattctctctgatgtcaatttgggtggactaatttagcttcttc 7973671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 8170730 - 8170778
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||||||||||||||||  |||| |||||||||| |||| ||||||||    
T  8170730 aaggtctcaggttcgatttcctctggtgtcaatttgggtgggctaattt 8170778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 10445156 - 10445100
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||||||||| |||  |||||  ||| |||||||| ||||||||    
T  10445156 aggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15566645 - 15566601
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||    
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 15566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 25289860 - 25289816
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||    
T  25289860 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 25289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34622565 - 34622525
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||| ||||| ||||||||||    
T  34622565 ctcctcaaggtctcaggttcgattttctctggtgtcaattt 34622525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40063671 - 40063711
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  40063671 ctccttaaggtctcaagttcgattctctccagtgccaattt 40063711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 44743872 - 44743816
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||| |||| |||| |||||| |||| | |||||| ||||||||    
T  44743872 aggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 49258408 - 49258364
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||    
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 49258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51222174 - 51222214
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||| ||||||||||||||||||||| ||| ||||||    
T  51222174 ctccttaaagtctcaggttcgattctctctcgtgccaattt 51222214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 52821781 - 52821737
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| ||| |||||| ||||||||||    
T  52821781 aggtctcaggttcgattccctctggtgccaatttcggtgagctaa 52821737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54990754 - 54990817
Alignment:
Q  1 ctccttaaggtctcaggttcgattct-ctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||||||||| ||| | || ||||||||||| |||||||| ||||||||    
T  54990754 ctcctcaaggtctcaggttcgattctcctcga-tggcaatttaggtgggctaatttagcttcttc 54990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11819828 - 11819891
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  11819828 ctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7347889 - 7347952
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||| |||||||| ||||||||    
T  7347889 ctccttgaggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttcttc 7347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44780138 - 44780075
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||    
T  44780138 ctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttc 44780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19703511 - 19703457
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  19703511 ctcctcaaggtctcaggttcgattctccctagtgtcaattaaggtgggctaattt 19703457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23361673 - 23361619
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  23361673 ctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaattt 23361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33727897 - 33727835
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | || |||||||| |||||||    
T  33727897 ctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43594342 - 43594288
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||| ||||||||||||||||||||||||||||||||||| | || ||||||||    
T  43594342 ctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaattt 43594288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6536572 - 6536635
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||| ||||||||| ||| ||||||||||| | |||||| ||||||||    
T  6536572 ctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40791919 - 40791856
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| | |||| |||||||||| ||||||||||||||||| ||| |||||||| ||||||||    
T  40791919 ctccttgaagtcttaggttcgattttctctagtgtcaatttaagtgggctaatttagcttcttc 40791856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27750782 - 27750844
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | ||  ||||||| |||||||    
T  27750782 ctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggactaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 45527616 - 45527666
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||||| || ||||||||||||| |||||||| ||||    
T  45527616 gtctcaggttcgattctctcaagcgtcaatttaggtgggctaatttagctt 45527666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35690088 - 35690047
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattta 42  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  35690088 ctcctcaaggtctcaggttcgattctctctggtgtcaattta 35690047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 3129872 - 3129828
Alignment:
Q  17 gttcgattctctctagtgtcaatttaggtgagctaattttgcttc 61  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||    
T  3129872 gttcgattctctctagtgtcaatttaagtgggctaatttagcttc 3129828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 16025696 - 16025652
Alignment:
Q  16 ggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||    
T  16025696 ggttcgattctctctagtgtcaatttagatgaactaatttagctt 16025652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 16852399 - 16852455
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||| ||| ||||||||    
T  16852399 aggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 18546379 - 18546323
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||| |  | ||||||||||||||| |||||| ||||||||    
T  18546379 aggtctcaggttcgattctcaccggcgtcaatttaggtgagataatttagcttcttc 18546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 36034539 - 36034483
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||| ||| |||||||||| ||||||||||||||| |||||||  |||||||    
T  36034539 aaggtctcaagtttgattctctctggtgtcaatttaggtgggctaattaagcttctt 36034483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 968421 - 968476
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||||||||||   || ||||||||||| |||||||| |||||||    
T  968421 aggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 3174828 - 3174789
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  3174828 tcctcaaggtctcaggttcgattctctctggtgtcaattt 3174789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 11492090 - 11492035
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||| ||||||||||||||  ||||||||||| |||| |||||||| |||||||    
T  11492090 aggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 13456529 - 13456495
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||| ||||||||||||||||||||||||    
T  13456529 aaggtctcagattcgattctctctagtgtcaattt 13456495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31408146 - 31408084
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| ||||| ||||||||||||||||||| |||||||||| | | | |||||| |||||||    
T  31408146 ctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43292460 - 43292398
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| ||| |||||||||| ||||||||  |||||||||||| ||| ||||||| |||||||    
T  43292460 ctcctcaagatctcaggttcaattctctccggtgtcaatttagatgaactaatttagcttctt 43292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 3624638 - 3624690
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||||||||  | ||||||||||||| |||||||| ||||    
T  3624638 aaggtctcaggttcgattctctc-cgggtcaatttaggtgggctaatttagctt 3624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 44595870 - 44595817
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||| |||||||||||||| |||||||||||||| ||  ||||||| |||||||    
T  44595870 gtcttaggttcgattctctttagtgtcaatttagatggactaatttagcttctt 44595817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 3060350 - 3060290
Alignment:
Q  150 tttcataaagtaaacccaagtcattctagaaaaatcatcaatgaagagaatgaaatacttg 210  Q
    ||||| ||| |||||||||||||| || | |||||||||||| || ||||| |||||||||    
T  3060350 tttcagaaaataaacccaagtcatccttgtaaaatcatcaataaaaagaataaaatacttg 3060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 4698869 - 4698825
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||    
T  4698869 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 4698825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 8485058 - 8485114
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||  ||||||||||||  ||| ||||||||||| |||||||| ||||||||    
T  8485058 aggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18540350 - 18540390
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  18540350 ctcctcaaggtctcaggttcgattctctctggtgccaattt 18540390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 21566800 - 21566744
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||| || | |||||||||   ||||||| |||||||||||    
T  21566800 aaggtctcaggttcgattctttccaatgtcaatttgaatgagctagttttgcttctt 21566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33017266 - 33017306
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  33017266 ctcctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 42740547 - 42740587
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaattta 42  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  42740547 tcctcaaggtctcaggttcaattctctctggtgtcaattta 42740587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17028288 - 17028225
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||    
T  17028288 ctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 16773866 - 16773922
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||||||  || ||||||||||| |||||||| ||||||||    
T  16773866 aggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28285304 - 28285367
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||| || ||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  28285304 ctcctcaaggtatcgggttcgattctttctagtgtcaatttgggtgggctaatttagcttcttc 28285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 29173549 - 29173604
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||| |||||||||||| ||||| ||||||||||||||| |||||||| |||||||    
T  29173549 aggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 35705044 - 35705101
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||||||| |  |||||||||| |||| |||||||| ||||||||    
T  35705044 aaggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttc 35705101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25627109 - 25627149
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  25627109 ctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 37229059 - 37229115
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||||||||| | ||| ||||||||  ||||||||||| |||||||    
T  37229059 aaggtctcaggttcgattctccccagtatcaatttacatgagctaatttagcttctt 37229115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 12669527 - 12669574
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtgagcta 51  Q
    |||||||| ||| |||||||||||||| ||||||||||||||| ||||    
T  12669527 cttaaggtttcaagttcgattctctctggtgtcaatttaggtgggcta 12669574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12877745 - 12877808
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || ||||||||||||||||||||| ||   |||||||||| |||||||| ||||||||    
T  12877745 ctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22020886 - 22020823
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| | ||||||| |||||||||||| ||||| |||||||||| |||||||| | ||||||    
T  22020886 ctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatttagtttcttc 22020823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43442248 - 43442311
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||||||||  ||||||||| | || |||||||| | ||||||    
T  43442248 ctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttc 43442311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 21589349 - 21589403
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||| |||| ||| ||||||||||| |||| ||| ||||||||    
T  21589349 gtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 26078069 - 26078035
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||||||||||||||||||||| ||||||    
T  26078069 aaggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 4793091 - 4793042
Alignment:
Q  14 caggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||| | |||| ||||||||||| |||||||| |||||||    
T  4793091 caggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 29075843 - 29075896
Alignment:
Q  11 tctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||| ||| |||||||| || |||||||| ||||||||    
T  29075843 tctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 7085772 - 7085728
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||| |||||||||| ||||||||||||||| |||| |||||    
T  7085772 aggtctccggttcgattccctctagtgtcaatttcggtgggctaa 7085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14285213 - 14285253
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  14285213 ctcctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25979222 - 25979262
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||||||||||||||||||||||  |||||||||    
T  25979222 ctcctcaaggtctcaggttcgattctctcttatgtcaattt 25979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30485879 - 30485923
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||    
T  30485879 aggtctcaggttcgattcactctggtgtcaatttcggtgggctaa 30485923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 37235979 - 37236035
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||| |||||||||| |  || |||||||| |||||||||||| |||||||    
T  37235979 aaggtctcagattcgattctccccggtatcaatttaagtgagctaatttagcttctt 37236035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37258390 - 37258350
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||| |||||||||||||||||| ||||||||||    
T  37258390 ctcctcaaggtttcaggttcgattctctctggtgtcaattt 37258350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33582025 - 33582088
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||    
T  33582025 ctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttc 33582088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11251139 - 11251193
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  11251139 ctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtgctaattt 11251193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21195700 - 21195638
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | || |||||||| |||||||    
T  21195700 ctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 39764992 - 39765044
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||| ||||    
T  39764992 aggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1435116 - 1435178
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| |||||||| ||||||||    
T  1435116 ctcctcaaggtctcag-ttcgattctctctggtgtcaatttgggtgggctaatttagcttcttc 1435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21213821 - 21213884
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||||||||||||||||||| |  ||| ||||||||||| |||| ||||||||||||    
T  21213821 ctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 41138382 - 41138425
Alignment:
Q  12 ctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  41138382 ctcaagttcgattctccctagtgtcaatttaggtgagctaattt 41138425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7918181 - 7918235
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||||||||||| | |||| ||  ||||||||||||||||||||||||||||||    
T  7918181 ctccttaaggtcttaagttcaatcatctctagtgtcaatttaggtgagctaattt 7918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8162089 - 8162027
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||| |||||||| ||| ||||||||| |||||||||||| |||| ||||||| |||||||    
T  8162089 ctccttgaggtctcaagttggattctctccagtgtcaatttaagtgaactaatttagcttctt 8162027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 6859327 - 6859274
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||||| |||||| ||||||||| || ||| |||||||    
T  6859327 gtctcaggttcgattctctctaatgtcaacttaggtgagttagtttagcttctt 6859274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 37971956 - 37972008
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttct 62  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||| ||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40416414 - 40416374
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  40416414 ctccttaaggtctcaggttcgattctctctggtgccaattt 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23052547 - 23052484
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||||| |||||| || ||| |||| |||||||| | ||||||    
T  23052547 ctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatttagtttcttc 23052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 33569875 - 33569820
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||||||||||| |||  |||||| |||  |||||||||||||||    
T  33569875 aggtctcaggttcgattctctctggtgctaatttaagtggactaattttgcttctt 33569820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38854486 - 38854423
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||||||| || |  | ||||||||||||| |||||||| ||||||||    
T  38854486 ctcctcaaggtctcaggttcgattatcaccggggtcaatttaggtgggctaatttagcttcttc 38854423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4060238 - 4060198
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  4060238 ctcctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11062412 - 11062452
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||||||||||| |||||||||| ||||||||||    
T  11062412 ctcctcaaggtctcaggtttgattctctcttgtgtcaattt 11062452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 19244167 - 19244215
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    |||||||||||||||||||||||| ||| ||||||  ||| ||||||||    
T  19244167 aaggtctcaggttcgattctctctggtgccaatttgagtgggctaattt 19244215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21304018 - 21303978
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||| |||||||||||||||||| ||||||||||    
T  21304018 ctcctgaaggtttcaggttcgattctctctggtgtcaattt 21303978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 27244374 - 27244422
Alignment:
Q  15 aggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||  ||||| |||||| |||||||||||| |||||||    
T  27244374 aggttcgattctcttcagtgttaatttaagtgagctaatttagcttctt 27244422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 36242458 - 36242414
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||    
T  36242458 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 36242414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41314043 - 41314087
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||    
T  41314043 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 41314087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6122846 - 6122909
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  6122846 ctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 6122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 44961825 - 44961879
Alignment:
Q  9 ggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  44961825 ggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 3799970 - 3800020
Alignment:
Q  13 tcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  3799970 tcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 40814431 - 40814373
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  40814431 tccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagctt 40814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6650647 - 6650692
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||    
T  6650647 ctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtg 6650692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 12587329 - 12587384
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||||||||  ||| ||||||||||| |||||||| ||||||||    
T  12587329 aggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttc 12587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 17745273 - 17745218
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| |||||||||||||| ||||||||||||||| | |||||| ||||||||    
T  17745273 aggtctcatgttcgattctctctggtgtcaatttaggtg-gttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 44126454 - 44126510
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||| || |||||||||||||| ||||||||||  |||||||| ||||||||    
T  44126454 aggtctcagatttgattctctctagtgccaatttaggtaggctaatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10526875 - 10526938
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||| ||||||||||||| | |||||||| |||| | |||||| ||||||||    
T  10526875 ctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 50920007 - 50920046
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  50920007 tccttaaggtttcaggttcgattctctctggtgtcaattt 50920046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51814546 - 51814605
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    ||||| |||||||||||||||||||||||  ||| |||||| |||| |||||||| ||||    
T  51814546 ctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 52116805 - 52116743
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| || ||||||||||| |||||| |||||| ||||| ||||| |||||||| |||||||    
T  52116805 ctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52336798 - 52336744
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | || ||||||||    
T  52336798 ctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaattt 52336744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29753701 - 29753742
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattta 42  Q
    ||||| |||||||||||||||||||||||| ||| |||||||    
T  29753701 ctcctcaaggtctcaggttcgattctctctggtgccaattta 29753742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33700797 - 33700756
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattta 42  Q
    ||||| |||||||||||||||||||||||| ||| |||||||    
T  33700797 ctcctcaaggtctcaggttcgattctctctggtgccaattta 33700756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1600316 - 1600276
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||| || |||||||||||||||||| ||||||||||    
T  1600316 ctccttaaagtttcaggttcgattctctctggtgtcaattt 1600276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 2220031 - 2220087
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||||| | ||||||||||  || |||||||| | ||||||    
T  2220031 aggtctcaggttcgattctctccaatgtcaatttaaatgggctaatttagtttcttc 2220087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2799914 - 2799954
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  2799914 ctcctcaaggtctcaggttcgattctctctggtgccaattt 2799954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 4874993 - 4874933
Alignment:
Q  150 tttcataaagtaaacccaagtcattctagaaaaatcatcaatgaagagaatgaaatacttg 210  Q
    ||||| ||| |||||||||||||| || | |||||||||||| || ||||| |||||||||    
T  4874993 tttcagaaaataaacccaagtcatccttgtaaaatcatcaataaaaagaataaaatacttg 4874933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 8077698 - 8077742
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  8077698 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 8077742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 8254898 - 8254854
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||||    
T  8254898 aggtctcaggttcgattatctctggtgtcaatttcggtgggctaa 8254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 9500501 - 9500457
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  9500501 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 9500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11063608 - 11063648
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||||| |||||||||||||||||||| ||||||    
T  11063608 ctcctcaaggtcttaggttcgattctctctagtgccaattt 11063648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15059548 - 15059504
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 15059504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15786344 - 15786304
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  15786344 ctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 16893453 - 16893509
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||| ||||  ||||||||||  ||| |||||||| ||||||||    
T  16893453 aggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18646904 - 18646948
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  18646904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 18646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 28283592 - 28283624
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaattta 42  Q
    ||||||||||||||||||||| |||||||||||    
T  28283592 gtctcaggttcgattctctctggtgtcaattta 28283624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 42858653 - 42858621
Alignment:
Q  9 ggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||||||||||||||||||||| ||||||||||    
T  42858653 ggtctcaggttcgattctctctggtgtcaattt 42858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 44370897 - 44370841
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||  || |||||||||| || |||||||||||||||||||||  |||||||    
T  44370897 aggtctcaactttgattctctctggtttcaatttaggtgagctaatttaacttcttc 44370841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21558180 - 21558243
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||| | |||||| ||||||||    
T  21558180 ctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30579387 - 30579450
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| |||||||||||||||||| ||||| ||| ||||||||||| |||||||| ||||||||    
T  30579387 ctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37473666 - 37473729
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||| | |||||| ||||||||    
T  37473666 ctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttc 37473729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41519288 - 41519226
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||    
T  41519288 ctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaatttagcttcttc 41519226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 41975946 - 41976001
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  41975946 aggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42712010 - 42712069
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgctt 60  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  42712010 ctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaatttagctt 42712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 33181224 - 33181172
Alignment:
Q  11 tctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| |||||||    
T  33181224 tctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 48983751 - 48983703
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattt 55  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  48983751 aaggtctcaggttcgattccctctagtgtcaatttgggtgggctaattt 48983703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15137605 - 15137668
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||| |||||||||| |||||||||| |||| |||||||| | ||||||    
T  15137605 ctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaatttagtttcttc 15137668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27313758 - 27313695
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||| |||| |||||||||||||  || |||||||||||||||||||| ||||||||    
T  27313758 ctcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttc 27313695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43590959 - 43591022
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || |||||||||||||||||| |||||| ||||| ||||| |||||||| ||||||||    
T  43590959 ctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 43591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 279978 - 279916
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||| ||||||||  ||| |||||| |||| |||||||| |||||||    
T  279978 ctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 4572315 - 4572258
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||||||  |||||||||| |||| ||||||||  |||||||    
T  4572315 aaggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttc 4572258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 45229035 - 45228986
Alignment:
Q  15 aggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||| |||||||||||| ||| |||||||| ||||||||    
T  45229035 aggttcgattctctccagtgtcaatttaagtgggctaatttagcttcttc 45228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9608653 - 9608613
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  9608653 ctcctcaagatctcaggttcgattctctctagtgtcaattt 9608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9836225 - 9836185
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  9836225 ctcctcaagatctcaggttcgattctctctagtgtcaattt 9836185  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 15905691 - 15905635
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||||| ||| ||||||||| |||| | |||||| ||||||||    
T  15905691 aggtctcaggttcgattctccctaatgtcaatttgggtgggttaatttagcttcttc 15905635  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9183215 - 9183152
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || ||||||||||||||| ||||| |||||||||| |||| |||||||| | ||||||    
T  9183215 ctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11720984 - 11720921
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||| |||| |||||||||| | |||| |||||| |||| |||||||| ||||||||    
T  11720984 ctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaatttagcttcttc 11720921  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17041036 - 17040973
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||||||| |||| |||||| |||| |  ||||| ||||||||    
T  17041036 ctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29385767 - 29385704
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||| |||||||| | ||| |||||| |||| |||| ||||||||||||    
T  29385767 ctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggctacttttgcttcttc 29385704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 33222423 - 33222462
Alignment:
Q  2 tccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  33222423 tcctcaaggtctcaggttcgattctctctggtgtcaattt 33222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41487411 - 41487474
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||||||||||||||||||||  |  ||| ||||||||||| |||||||| ||||||||    
T  41487411 ctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2883002 - 2883052
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagcta 51  Q
    ||||| |||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  2883002 ctcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggcta 2883052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 23945920 - 23945958
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  23945920 aggtctcaggttcgatcctctctaatgtcaatttaggtg 23945958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48771990 - 48772052
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||| ||||||||||||||||| || | |||  ||||||||||| |||||||| |||||||    
T  48771990 ctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggctaatttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 26199571 - 26199624
Alignment:
Q  11 tctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||| |||  | ||||||||||||| |||||| ||||||||    
T  26199571 tctcaggttcgattctccctacagccaatttaggtgagttaatttagcttcttc 26199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 29196963 - 29197019
Alignment:
Q  7 aaggtctcaggttcgatt--ctctctagtgtcaatttaggtgagctaattttgcttc 61  Q
    ||||||||||||||||||  ||||||||||||||| | ||||| ||||||| |||||    
T  29196963 aaggtctcaggttcgattttctctctagtgtcaatatgggtgatctaatttagcttc 29197019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 7309415 - 7309470
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| |||||||||||||  ||||||||||| ||| |||||||| ||||||||    
T  7309415 aggtctcaagttcgattctctcc-gtgtcaatttaagtgggctaatttagcttcttc 7309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7721421 - 7721461
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| ||||||||| |||||||||||||| ||||||||||    
T  7721421 ctcctcaaggtctcatgttcgattctctctggtgtcaattt 7721461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 22703541 - 22703585
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||    
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 22703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26459434 - 26459394
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  26459434 ctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39631896 - 39631936
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  39631896 ctcctcaaggtctcaggttcgattctctcttgtgccaattt 39631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20213093 - 20213156
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || |||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  20213093 ctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22107116 - 22107179
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| || |||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  22107116 ctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 1992255 - 1992209
Alignment:
Q  17 gttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  1992255 gttcgattctctctagtgtcaatttaggtgtgctaatttagcttctt 1992209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 3715511 - 3715566
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||| ||||||||||||| |||||||||||||||| ||| |||| |||||||    
T  3715511 aggtctcaagttcgattctctccagtgtcaatttaggtgggctgatttagcttctt 3715566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11103459 - 11103396
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||| | ||||||||||||| ||| ||||||| ||||||||||||  |||||||    
T  11103459 ctccttaaggtctccgattcgattctctctggtgccaatttaagtgagctaatttaacttcttc 11103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 12234524 - 12234469
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||||| ||||||||||||| || | |||||| |||||||    
T  12234524 aggtctcaggttcgattctctccagtgtcaatttagatgggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18263892 - 18263955
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| ||||| |||||||||||||| | |||| ||||||||||| |||||||| ||||||||    
T  18263892 ctccttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttc 18263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 33549163 - 33549218
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||||||||||||||||||||   || |||||||||||||||||||| |||||||    
T  33549163 aggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6385914 - 6385976
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    |||||||||||||||||||||||||||||  |||  ||||| |||| |||||||| |||||||    
T  6385914 ctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14278135 - 14278090
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14278135 ctccttaaggtctcaggtttgattctctctggtgtcaatttgggtg 14278090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 6758439 - 6758383
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| | |||||||||||| ||||||||||||||| || ||||| ||||||||    
T  6758439 aggtctcaagatcgattctctctggtgtcaatttaggtgggcaaatttagcttcttc 6758383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14199971 - 14199909
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttctt 63  Q
    ||||| |||||||||| ||||||||  |||||||||||||| ||||  ||||||| |||||||    
T  14199971 ctcctcaaggtctcagattcgattccttctagtgtcaatttgggtggactaatttagcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 21418531 - 21418585
Alignment:
Q  10 gtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||| ||||||||||| |||||| ||||| ||||| |||||||| ||||||||    
T  21418531 gtctcaagttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 24256840 - 24256802
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggt 45  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  24256840 aaggtctcaagttcgattctctctggtgtcaatttaggt 24256802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 33456672 - 33456622
Alignment:
Q  6 taaggtctcaggttcgattctctctagtgtcaatttaggtgagctaatttt 56  Q
    |||||||||| |||||||||| ||| ||||||||||||||| | |||||||    
T  33456672 taaggtctcatgttcgattctttctggtgtcaatttaggtgggttaatttt 33456622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 12216803 - 12216848
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaat 53  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||    
T  12216803 aggtctcaggttcgattctcttgactgtcaatttaggtgggctaat 12216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4105103 - 4105143
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||||||| |||||||||||||| ||||| ||||||||||    
T  4105103 ctccttaagatctcaggttcgattttctctggtgtcaattt 4105143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11448922 - 11448966
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaa 52  Q
    ||||||||||||||||||||||| ||| |||||| |||| |||||    
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggctaa 11448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45783 - 45738
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtg 46  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||    
T  45783 ctccttgaggtctcatgttcgattctctctggtgtcaatttaggtg 45738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 4395 - 4455
Alignment:
Q  4 cttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||| | ||||||||||| ||||||||||||||| ||||  ||||||| ||||||||    
T  4395 cttaaggttttaggttcgattccctctagtgtcaatttgggtggactaatttagcttcttc 4455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 15340 - 15284
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||||||||||||   || ||||||||||| |||||||| ||||||||    
T  15340 aggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttc 15284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42688 - 42625
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||| ||| ||||| |||||||||||| | ||||||||||||||| ||||||||  |||||||    
T  42688 ctcctcaagatctcaagttcgattctctatggtgtcaatttaggtgggctaatttaacttcttc 42625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 25365 - 25308
Alignment:
Q  7 aaggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    |||||||||||||||||| ||||| ||||||||||   ||||||| ||| ||||||||    
T  25365 aaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagcttcttc 25308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2735 - 2695
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  2735 ctcctcaaggtctcaggttcgattctctctggtgccaattt 2695  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19986 - 19946
Alignment:
Q  1 ctccttaaggtctcaggttcgattctctctagtgtcaattt 41  Q
    ||||| |||||||||||||||||||||||| |||| |||||    
T  19986 ctcctcaaggtctcaggttcgattctctctggtgttaattt 19946  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 41650 - 41594
Alignment:
Q  8 aggtctcaggttcgattctctctagtgtcaatttaggtgagctaattttgcttcttc 64  Q
    ||||||||||||| |||||||||  ||||||||| |||| |||||||| || |||||    
T  41650 aggtctcaggttcaattctctctgatgtcaatttgggtgggctaatttagcctcttc 41594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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