View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6106_high_1 (Length: 664)

Name: NF6106_high_1
Description: NF6106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6106_high_1
NF6106_high_1
[»] chr4 (25 HSPs)
chr4 (16-419)||(45534507-45534939)
chr4 (606-664)||(35716328-35716386)
chr4 (606-664)||(53991581-53991639)
chr4 (606-664)||(3821228-3821286)
chr4 (606-660)||(39716751-39716805)
chr4 (607-661)||(47560251-47560305)
chr4 (604-664)||(29712366-29712427)
chr4 (617-664)||(578634-578681)
chr4 (606-664)||(24948316-24948374)
chr4 (606-664)||(39406261-39406319)
chr4 (606-664)||(51347487-51347545)
chr4 (606-664)||(50119987-50120045)
chr4 (414-458)||(45534033-45534077)
chr4 (629-664)||(8956938-8956973)
chr4 (629-664)||(8986910-8986945)
chr4 (629-664)||(9888919-9888954)
chr4 (609-664)||(13171627-13171682)
chr4 (607-662)||(35498564-35498619)
chr4 (629-664)||(37349808-37349843)
chr4 (606-664)||(3757725-3757783)
chr4 (606-664)||(20588561-20588619)
chr4 (622-664)||(30529308-30529350)
chr4 (623-664)||(24547347-24547388)
chr4 (611-660)||(52799029-52799078)
chr4 (604-664)||(36743231-36743291)
[»] chr8 (12 HSPs)
chr8 (16-354)||(31694626-31694970)
chr8 (354-545)||(31694994-31695184)
chr8 (605-664)||(36776402-36776461)
chr8 (606-660)||(41152667-41152721)
chr8 (405-458)||(31694167-31694220)
chr8 (606-664)||(24053913-24053971)
chr8 (607-660)||(18378836-18378889)
chr8 (629-664)||(8162805-8162840)
chr8 (629-664)||(8760723-8760758)
chr8 (629-664)||(25836295-25836330)
chr8 (623-664)||(41534278-41534319)
chr8 (628-664)||(41972977-41973013)
[»] chr1 (18 HSPs)
chr1 (606-664)||(29844911-29844969)
chr1 (607-664)||(33075686-33075743)
chr1 (614-664)||(10766193-10766243)
chr1 (606-664)||(22198937-22198995)
chr1 (604-660)||(1367288-1367344)
chr1 (606-660)||(29188334-29188388)
chr1 (606-660)||(33359699-33359753)
chr1 (607-664)||(42678374-42678431)
chr1 (604-664)||(1826790-1826850)
chr1 (606-660)||(4890097-4890151)
chr1 (606-664)||(16300388-16300446)
chr1 (606-660)||(17364637-17364691)
chr1 (606-664)||(52306068-52306126)
chr1 (609-664)||(46626354-46626409)
chr1 (606-664)||(19322374-19322432)
chr1 (606-664)||(47134703-47134761)
chr1 (629-664)||(28570747-28570782)
chr1 (397-433)||(41884211-41884247)
[»] chr3 (9 HSPs)
chr3 (609-664)||(11955555-11955610)
chr3 (606-664)||(22473643-22473701)
chr3 (606-664)||(22519189-22519246)
chr3 (606-664)||(29530591-29530649)
chr3 (607-664)||(33872205-33872262)
chr3 (606-664)||(8528133-8528191)
chr3 (622-664)||(19368971-19369013)
chr3 (609-663)||(26102181-26102235)
chr3 (623-664)||(35855220-35855261)
[»] chr2 (13 HSPs)
chr2 (609-664)||(9920939-9920994)
chr2 (609-664)||(17836969-17837024)
chr2 (606-664)||(32677213-32677271)
chr2 (604-660)||(10050223-10050279)
chr2 (608-660)||(9545809-9545861)
chr2 (609-660)||(2952759-2952810)
chr2 (606-664)||(28607220-28607278)
chr2 (607-660)||(4292816-4292869)
chr2 (611-664)||(18096495-18096548)
chr2 (606-664)||(24520865-24520923)
chr2 (606-659)||(10876604-10876657)
chr2 (623-664)||(19486205-19486246)
chr2 (397-433)||(4058998-4059034)
[»] chr7 (15 HSPs)
chr7 (606-664)||(3791478-3791536)
chr7 (607-664)||(29467751-29467808)
chr7 (605-662)||(39276611-39276668)
chr7 (607-662)||(21670824-21670879)
chr7 (606-664)||(21601000-21601058)
chr7 (607-664)||(11840477-11840534)
chr7 (607-660)||(39651182-39651235)
chr7 (609-660)||(17169026-17169077)
chr7 (606-660)||(48529967-48530021)
chr7 (605-662)||(27737773-27737830)
chr7 (607-664)||(44804520-44804577)
chr7 (403-458)||(34853322-34853377)
chr7 (603-664)||(9143469-9143533)
chr7 (623-664)||(35157025-35157066)
chr7 (612-664)||(29684143-29684195)
[»] scaffold0385 (1 HSPs)
scaffold0385 (611-664)||(8330-8383)
[»] chr6 (7 HSPs)
chr6 (606-662)||(15045578-15045634)
chr6 (609-664)||(4897524-4897579)
chr6 (606-660)||(1218517-1218571)
chr6 (606-660)||(18323834-18323888)
chr6 (606-660)||(24443926-24443980)
chr6 (605-664)||(9737782-9737841)
chr6 (606-664)||(6969325-6969383)
[»] scaffold0009 (1 HSPs)
scaffold0009 (606-664)||(225434-225492)
[»] chr5 (14 HSPs)
chr5 (607-664)||(3088061-3088118)
chr5 (604-664)||(12592498-12592558)
chr5 (605-660)||(41689273-41689328)
chr5 (606-660)||(30140501-30140555)
chr5 (607-660)||(25698751-25698804)
chr5 (605-664)||(36886998-36887057)
chr5 (607-664)||(26602198-26602255)
chr5 (607-662)||(33709845-33709900)
chr5 (371-458)||(30002869-30002957)
chr5 (629-664)||(754474-754509)
chr5 (629-664)||(6305479-6305514)
chr5 (629-664)||(43138576-43138611)
chr5 (623-664)||(30754425-30754466)
chr5 (606-635)||(34715602-34715631)
[»] scaffold0057 (1 HSPs)
scaffold0057 (606-660)||(20613-20667)
[»] scaffold0759 (1 HSPs)
scaffold0759 (606-664)||(5921-5979)
[»] scaffold0069 (1 HSPs)
scaffold0069 (606-655)||(11772-11821)
[»] scaffold0381 (1 HSPs)
scaffold0381 (629-664)||(9591-9626)


Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-144; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 16 - 419
Target Start/End: Original strand, 45534507 - 45534939
Alignment:
Q  16 aattacaagagatgaactttgaaggacaagcacacatcatggtgctttgaacttgcgagcatcgtttttaaggaattttacaagaaacccaaatgaaaac 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  45534507 aattgcaagagatgaactttgaaggacaagcacacatcatggtgctttgaacttccgagcatcgtttttaagggattttacaagaaacccaaatgaaaac 45534606  T
Q  116 tcttgtctg--------ccaatttgttctaatataccttccattgctgccaattgcttttgacattgaatttctcctatgaatcgtttcaataaatgtct 207  Q
    |||||||||        | ||| ||||||||||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45534607 tcttgtctgagactttgcaaatctgttctaatatacattccattgctactaattgtttttgacattgaatttctcctatgaatcgtttcaataaatgtct 45534706  T
Q  208 aattttaatgctcaaactcttagtggggaggtgtggaattgaaacacgaccataaattgagaaaatgaggtgtggatgtttgggatttaatttggggatc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45534707 aattttaatgctcaaactcttagtggggaggtgtggaattgaaacacaacaataaattgagaaaatgaggtgtggatgtttgtgatttaatttggggatc 45534806  T
Q  308 agagggagctatcgagagaggaagagacggtggtaggccatgatac---------------------atataatgtaagcagatcataataaaatcaata 386  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||                     |||||||||| ||||| |||||||||||||||     
T  45534807 agagggagctatggggagaggaagagacggtggcaggccatgatacactgaaagagaaaggaaaaaaatataatgtaggcagaccataataaaatcaatg 45534906  T
Q  387 ttcctttctaatctaacagttaaaatcaacttt 419  Q
    ||||| |||||||||||||||||||||||||||    
T  45534907 ttcctctctaatctaacagttaaaatcaacttt 45534939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 35716386 - 35716328
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35716386 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataagg 35716328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 53991639 - 53991581
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53991639 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataagg 53991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 3821286 - 3821228
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  3821286 atctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataagg 3821228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 39716805 - 39716751
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  39716805 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 39716751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 47560305 - 47560251
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctata 661  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  47560305 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 29712366 - 29712427
Alignment:
Q  604 acatctatatacttatattaaaa-gaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||    
T  29712366 acatctatatacttatattaaaaagaaatgtcccttaaatttaccattttgcccctataagg 29712427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 664
Target Start/End: Complemental strand, 578681 - 578634
Alignment:
Q  617 tatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  578681 tatattaaaagaaatgtctcattgatttaccattttgcccctataagg 578634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 24948374 - 24948316
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||| |||||||||||||  || |||||||||||||| |||||||||    
T  24948374 atctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataagg 24948316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 39406319 - 39406261
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||| ||||||||||| || || ||||||||||| ||||||||||||    
T  39406319 atctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataagg 39406261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 51347487 - 51347545
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||||||||||||| || ||||||||||||||||||||||||    
T  51347487 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataagg 51347545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 50120045 - 50119987
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  ||||| |||||||| || ||||||||||||||||||||||||    
T  50120045 atctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataagg 50119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 45534077 - 45534033
Alignment:
Q  414 aactttcctatggtgggaaaatcttccctctacccaccataaatg 458  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||    
T  45534077 aactttcttatggtgggaaaatcttccccctacccaccctaaatg 45534033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 8956938 - 8956973
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataagg 8956973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 8986910 - 8986945
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataagg 8986945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 9888954 - 9888919
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagg 9888919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 664
Target Start/End: Original strand, 13171627 - 13171682
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||| |||  |||| ||||||||| || ||||||||||||||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataagg 13171682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 35498619 - 35498564
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    |||||||||| |||| |||||||||| ||| || ||||| ||||||||||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataa 35498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 37349808 - 37349843
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataagg 37349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 3757725 - 3757783
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  ||||||||||| |  || ||||||||||||||||||||||||    
T  3757725 atctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataagg 3757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 20588561 - 20588619
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||||||||||||| || ||| ||||||||||| ||||||||    
T  20588561 atctatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataagg 20588619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 622 - 664
Target Start/End: Complemental strand, 30529350 - 30529308
Alignment:
Q  622 taaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||| |||| || ||||||||||||||||||||||||    
T  30529350 taaaagaaatatcccttgaatttaccattttgcccctataagg 30529308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 623 - 664
Target Start/End: Original strand, 24547347 - 24547388
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||| || ||||||||||||| ||||||||||    
T  24547347 aaaagaaatgtcccttgaatttaccattttgtccctataagg 24547388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 52799029 - 52799078
Alignment:
Q  611 tatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||  |  |||||||||||| |||||||    
T  52799029 tatacttatattaaaagaaatgtcctttaaatttaccattttacccctat 52799078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 36743291 - 36743231
Alignment:
Q  604 acatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||| |||  |||||||||||||| |  ||||||||||||| | ||||||||    
T  36743291 acatctatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataagg 36743231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 31694626 - 31694970
Alignment:
Q  16 aattacaagagatgaactttgaaggacaagcacacatcatggtgctttgaacttgcgagcatcgtttttaaggaattttacaagaaacccaaatgaaaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31694626 aattacaagagatgaactttgaaggacaagcacacatcatggtgctttgaacttgcgagcatcgtttttaagggattttacaagaaacccaaatgaaaac 31694725  T
Q  116 tcttgtctg--------ccaatttgttctaatataccttccattgctgccaattgcttttgacattgaatttctcctatgaatcgtttcaataaatgtct 207  Q
    |||||||||        | ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  31694726 tcttgtctgagactttgcaaatctgttctaatataccttccattgctgctaattgcttttgacattgaatttctcatatgaatcgtttcaataaatgcct 31694825  T
Q  208 aattttaatgctcaaactcttagtggggaggtgtggaattgaaacacgaccataaattgagaaaatgaggtgtggatgtttgggatttaatttggggatc 307  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31694826 aattttaatactcaaactcttagtggggaggtgtggaattgaaacacgaccataaattgagaaaatgaggtgtggatgtttgggatttaatttggcgatc 31694925  T
Q  308 agagggagctat--cgagagaggaagagacggtggtaggccatgataca 354  Q
    |    |||||||   ||||||||||||||||||||||||||||||||||    
T  31694926 a----gagctatggagagagaggaagagacggtggtaggccatgataca 31694970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 354 - 545
Target Start/End: Original strand, 31694994 - 31695184
Alignment:
Q  354 atataatgtaagcagatcataataaaatcaatattcctttctaatctaacagttaaaatcaactttcctatggtgggaaaatcttccctctacccaccat 453  Q
    |||||||||| ||| | ||||||||||||||||||||| | ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  31694994 atataatgtaggcataccataataaaatcaatattcctctttaatctaacagttaaaatcaatttccctatgatgggaaaatcttccctctacccaccat 31695093  T
Q  454 aaatgttaccctttatttatcctactaaaatgaaatagaatgacattaaattactcgtaaattgttttgaacaatattcaattacttcccct 545  Q
    |||||  ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31695094 aaatgccaccctttgtttgtcctactaaaatgaaa-agaatgacattaaattactcgtaaattgttttgaacaatattcaattacttcccct 31695184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 36776402 - 36776461
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| |||  |||||||||||||| || ||||||||||||||||||||||||    
T  36776402 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataagg 36776461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 41152667 - 41152721
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||| ||||||    
T  41152667 atctatatacttatataaaaagaaatgtcccttgaatttaccattttgtccctat 41152721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 31694220 - 31694167
Alignment:
Q  405 gttaaaatcaactttcctatggtgggaaaatcttccctctacccaccataaatg 458  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||| ||||||    
T  31694220 gttaaatttaactttcctatggtgggaaaatcttccccctacccaccctaaatg 31694167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 24053913 - 24053971
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||||||||||||| || |||||||||||||| |||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataagg 24053971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 18378889 - 18378836
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||||  || ||||| ||||||||| ||||    
T  18378889 tctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctat 18378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 8162840 - 8162805
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagg 8162805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 8760723 - 8760758
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataagg 8760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 25836330 - 25836295
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataagg 25836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 623 - 664
Target Start/End: Complemental strand, 41534319 - 41534278
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||| |||||||||||| |||||||||||||| |||||||||    
T  41534319 aaaataaatgtcccatgaatttaccattttgctcctataagg 41534278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 628 - 664
Target Start/End: Original strand, 41972977 - 41973013
Alignment:
Q  628 aaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||| || ||||||||||||||||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataagg 41973013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 29844969 - 29844911
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29844969 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 29844911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 33075743 - 33075686
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33075743 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataagg 33075686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 614 - 664
Target Start/End: Original strand, 10766193 - 10766243
Alignment:
Q  614 acttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10766193 acttatattaaaagaaatgtcctatggatttaccattttgcccctataagg 10766243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 22198995 - 22198937
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  22198995 atctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataagg 22198937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 660
Target Start/End: Original strand, 1367288 - 1367344
Alignment:
Q  604 acatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  1367288 acatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 1367344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 29188388 - 29188334
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  29188388 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 29188334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 33359699 - 33359753
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  33359699 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 33359753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Original strand, 42678374 - 42678431
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||    
T  42678374 tctatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataagg 42678431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 1826790 - 1826850
Alignment:
Q  604 acatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||    
T  1826790 acatctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataagg 1826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 4890097 - 4890151
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||| ||||    
T  4890097 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctat 4890151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 16300388 - 16300446
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||  |||||||| || |||||||||||||| |||||||||    
T  16300388 atctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataagg 16300446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 17364691 - 17364637
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||| |||  || ||||||||||||||||||||    
T  17364691 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctat 17364637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 52306068 - 52306126
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||| ||||||||| |||| |  ||||||||||||||||||||||||    
T  52306068 atctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataagg 52306126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 609 - 664
Target Start/End: Complemental strand, 46626409 - 46626354
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||| |||  |||||||||||||| || ||||||||||||||||||||||||    
T  46626409 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataagg 46626354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 19322432 - 19322374
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||| ||||||||| || ||||||||||||||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataagg 19322374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 47134703 - 47134761
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||| ||| | |||||||  || ||||||||||||||||||||||||    
T  47134703 atctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataagg 47134761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 28570747 - 28570782
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagg 28570782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 41884211 - 41884247
Alignment:
Q  397 atctaacagttaaaatcaactttcctatggtgggaaa 433  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  41884211 atctaatagttagaatcaactttcctatggtgggaaa 41884247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 609 - 664
Target Start/End: Complemental strand, 11955610 - 11955555
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11955610 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 11955555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 22473643 - 22473701
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22473643 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataagg 22473701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 22519189 - 22519246
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| ||||||||||| |||||  || ||||||||||||||||||||||||    
T  22519189 atctatatacttctattaaaagaa-tgtccattgaatttaccattttgcccctataagg 22519246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 29530649 - 29530591
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||||||||||||| || ||||||||||||| ||||||||||    
T  29530649 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataagg 29530591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 664
Target Start/End: Original strand, 33872205 - 33872262
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||||||| ||||| ||||    
T  33872205 tctatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagg 33872262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 8528191 - 8528133
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||  |||||||||||||| || |||||||||| || ||||||||||    
T  8528191 atctatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataagg 8528133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 622 - 664
Target Start/End: Complemental strand, 19369013 - 19368971
Alignment:
Q  622 taaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||| ||  |||||||||||||||||||||||    
T  19369013 taaaagaaatgtcccttgattttaccattttgcccctataagg 19368971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 663
Target Start/End: Complemental strand, 26102235 - 26102181
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataag 663  Q
    |||||||| |||  |||||||||||||  || |||||||||||||||||||||||    
T  26102235 tatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataag 26102181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 623 - 664
Target Start/End: Original strand, 35855220 - 35855261
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  35855220 aaaagaaatgtcccttaaatttaccattttgcccctataagg 35855261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 609 - 664
Target Start/End: Complemental strand, 9920994 - 9920939
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9920994 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 9920939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 609 - 664
Target Start/End: Original strand, 17836969 - 17837024
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  17836969 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataagg 17837024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 32677271 - 32677213
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  32677271 atctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataagg 32677213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 660
Target Start/End: Complemental strand, 10050279 - 10050223
Alignment:
Q  604 acatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  10050279 acatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 10050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 9545861 - 9545809
Alignment:
Q  608 ctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 9545809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 2952759 - 2952810
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  2952759 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 2952810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 28607220 - 28607278
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||| ||||||||||    
T  28607220 atctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataagg 28607278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 4292869 - 4292816
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||||  || |||||||||||||| |||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctat 4292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 611 - 664
Target Start/End: Original strand, 18096495 - 18096548
Alignment:
Q  611 tatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||||||||||||  || ||||||||||||||||||||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataagg 18096548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 24520865 - 24520923
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||| |||||||||||||| || |||||  |||||||| ||||||||    
T  24520865 atctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataagg 24520923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 10876657 - 10876604
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgccccta 659  Q
    ||||||||||| |||  |||||||||||||| || |||||||||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgccccta 10876604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 664
Target Start/End: Original strand, 19486205 - 19486246
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  19486205 aaaagaaatgtcccttgaatttaccattttgcccctataagg 19486246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 4058998 - 4059034
Alignment:
Q  397 atctaacagttaaaatcaactttcctatggtgggaaa 433  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  4058998 atctaatagtcaaaatcaactttcctatggtgggaaa 4059034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 3791478 - 3791536
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3791478 atctatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataagg 3791536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 607 - 664
Target Start/End: Original strand, 29467751 - 29467808
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  29467751 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataagg 29467808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 662
Target Start/End: Original strand, 39276611 - 39276668
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  39276611 catctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataa 39276668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 21670879 - 21670824
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  21670879 tctatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataa 21670824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 21601058 - 21601000
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||    
T  21601058 atctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataagg 21601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 11840534 - 11840477
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||    
T  11840534 tctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataagg 11840477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 39651235 - 39651182
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  39651235 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 39651182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 17169026 - 17169077
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  17169026 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 17169077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 48530021 - 48529967
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || | ||||||||||||||||||    
T  48530021 atctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctat 48529967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 662
Target Start/End: Complemental strand, 27737830 - 27737773
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    ||||||||||||| ||| |||||||| ||||| || |||||||||||| |||||||||    
T  27737830 catctatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataa 27737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 664
Target Start/End: Original strand, 44804520 - 44804577
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||| |||  |||||||||||||| || ||||||||||||| ||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataagg 44804577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 458
Target Start/End: Original strand, 34853322 - 34853377
Alignment:
Q  403 cagttaaaatcaactttcctatggtgggaaaatcttccctctacccaccataaatg 458  Q
    |||| |||| ||||||||||||||||||||| ||||||  ||||||||| ||||||    
T  34853322 cagtaaaaagcaactttcctatggtgggaaagtcttcctcctacccaccctaaatg 34853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 9143469 - 9143533
Alignment:
Q  603 tacatctatatacttatattaaaagaaatg---tcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||| |||| |||||||||    |||| || ||||||||||||||||||||||||    
T  9143469 tacatctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataagg 9143533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 623 - 664
Target Start/End: Complemental strand, 35157066 - 35157025
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| | || ||||||||||||||||||||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataagg 35157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 612 - 664
Target Start/End: Complemental strand, 29684195 - 29684143
Alignment:
Q  612 atacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||| |||| ||||||||||| || || |||||||||||| |||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataagg 29684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 611 - 664
Target Start/End: Complemental strand, 8383 - 8330
Alignment:
Q  611 tatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8383 tatacttatattaaaagaaatgtcccatgaatttaccattttgcccctataagg 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 662
Target Start/End: Complemental strand, 15045634 - 15045578
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataa 15045578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 609 - 664
Target Start/End: Complemental strand, 4897579 - 4897524
Alignment:
Q  609 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  4897579 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataagg 4897524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 1218517 - 1218571
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  1218517 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 1218571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 18323834 - 18323888
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  18323834 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 18323888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 24443926 - 24443980
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||| |||  || ||||||||||||||||||||    
T  24443926 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctat 24443980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 9737841 - 9737782
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| |||  |||||||||||||| || ||||||||||||| ||||||||||    
T  9737841 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataagg 9737782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 6969383 - 6969325
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||| |||   |||||||| || ||||||||||||||||||||||||    
T  6969383 atctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataagg 6969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 225434 - 225492
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  225434 atctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataagg 225492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 3088118 - 3088061
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataagg 3088061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 12592558 - 12592498
Alignment:
Q  604 acatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||    
T  12592558 acatctatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataagg 12592498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 41689273 - 41689328
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  41689273 catctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 41689328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 30140501 - 30140555
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  30140501 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 30140555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 25698804 - 25698751
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 25698751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 36887057 - 36886998
Alignment:
Q  605 catctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||| |||  |||||||||||||| || ||||||||||||||||||||||||    
T  36887057 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataagg 36886998  T

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Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 26602255 - 26602198
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||||||| |||||||||||||| || |||||||||||| ||| |||||||    
T  26602255 tctatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagg 26602198  T

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Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 33709900 - 33709845
Alignment:
Q  607 tctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataa 662  Q
    ||||||||||||||||||||  |||||||| || |||||||||||| |||||||||    
T  33709900 tctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataa 33709845  T

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Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 30002957 - 30002869
Alignment:
Q  371 cataataaaatcaatattcctttctaatctaacagttaaaa-tcaactttcctatggtgggaaaatcttccctctacccaccataaatg 458  Q
    ||||||||||||| ||||||||| |||| |||| || |||  ||||||  ||||||||||||||||||| || || |||||| ||||||    
T  30002957 cataataaaatcagtattcctttttaatttaacggtaaaatgtcaactgacctatggtgggaaaatctttccccttcccaccctaaatg 30002869  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 754509 - 754474
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagg 754474  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 6305514 - 6305479
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataagg 6305479  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 43138611 - 43138576
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataagg 43138576  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 623 - 664
Target Start/End: Original strand, 30754425 - 30754466
Alignment:
Q  623 aaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  30754425 aaaagaaatgtcctttgaatttaccattttgcccctataagg 30754466  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 635
Target Start/End: Original strand, 34715602 - 34715631
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcc 635  Q
    ||||||||||||||||||||||||||||||    
T  34715602 atctatatacttatattaaaagaaatgtcc 34715631  T

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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 20667 - 20613
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctat 660  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  20667 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 20613  T

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Target: scaffold0759 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 5979 - 5921
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| |||| |||   ||||||||||| ||||||||||||||||||||||||    
T  5979 atctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataagg 5921  T

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Target: scaffold0069 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 655
Target Start/End: Original strand, 11772 - 11821
Alignment:
Q  606 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcc 655  Q
    |||||||||||||||||||||||||||||   || |||||||||||||||    
T  11772 atctatatacttatattaaaagaaatgtcatttgaatttaccattttgcc 11821  T

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Target: scaffold0381 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Original strand, 9591 - 9626
Alignment:
Q  629 aatgtcccatggatttaccattttgcccctataagg 664  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagg 9626  T

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