View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6106_low_5 (Length: 334)

Name: NF6106_low_5
Description: NF6106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6106_low_5
NF6106_low_5
[»] chr3 (79 HSPs)
chr3 (13-312)||(36417500-36417800)
chr3 (200-316)||(42342791-42342907)
chr3 (199-316)||(9294270-9294387)
chr3 (200-316)||(33689691-33689807)
chr3 (200-316)||(40033768-40033884)
chr3 (200-316)||(2796179-2796295)
chr3 (200-316)||(19741204-19741320)
chr3 (200-316)||(23458291-23458407)
chr3 (197-316)||(40758144-40758260)
chr3 (201-316)||(51994198-51994313)
chr3 (198-316)||(55052560-55052677)
chr3 (226-312)||(3469226-3469312)
chr3 (226-312)||(3469514-3469600)
chr3 (226-312)||(32306450-32306536)
chr3 (226-308)||(37778591-37778673)
chr3 (226-312)||(40788734-40788820)
chr3 (203-317)||(53756747-53756861)
chr3 (226-311)||(32306739-32306824)
chr3 (203-316)||(46474818-46474931)
chr3 (238-312)||(13948818-13948892)
chr3 (226-312)||(35643877-35643963)
chr3 (198-312)||(36418004-36418118)
chr3 (238-310)||(10294875-10294947)
chr3 (209-312)||(52032147-52032250)
chr3 (226-312)||(10294593-10294679)
chr3 (238-312)||(10307689-10307763)
chr3 (226-312)||(29118852-29118938)
chr3 (238-312)||(33506264-33506338)
chr3 (209-310)||(29685950-29686051)
chr3 (203-312)||(42343047-42343156)
chr3 (206-310)||(9368619-9368723)
chr3 (204-312)||(41558198-41558306)
chr3 (200-316)||(43384283-43384399)
chr3 (238-312)||(11910737-11910811)
chr3 (226-315)||(33156307-33156396)
chr3 (226-316)||(36314579-36314669)
chr3 (203-316)||(40506099-40506213)
chr3 (225-311)||(43998170-43998256)
chr3 (238-308)||(47551531-47551601)
chr3 (226-316)||(48322658-48322748)
chr3 (238-308)||(52032457-52032527)
chr3 (226-311)||(4323519-4323604)
chr3 (219-316)||(10770772-10770869)
chr3 (200-312)||(40758426-40758538)
chr3 (203-314)||(41988587-41988698)
chr3 (200-314)||(21186009-21186123)
chr3 (226-307)||(29686259-29686340)
chr3 (226-311)||(41421998-41422083)
chr3 (238-310)||(3596147-3596219)
chr3 (226-314)||(4322618-4322705)
chr3 (200-315)||(9367741-9367856)
chr3 (226-312)||(10770516-10770602)
chr3 (226-312)||(36314324-36314410)
chr3 (197-247)||(55052289-55052339)
chr3 (200-313)||(1079536-1079649)
chr3 (203-312)||(26463635-26463744)
chr3 (180-312)||(33689364-33689493)
chr3 (238-311)||(40788458-40788531)
chr3 (203-312)||(46475097-46475205)
chr3 (226-314)||(6956274-6956362)
chr3 (200-312)||(19740923-19741035)
chr3 (272-316)||(26463910-26463954)
chr3 (199-247)||(34142599-34142647)
chr3 (203-279)||(36150530-36150606)
chr3 (200-311)||(41558008-41558119)
chr3 (201-312)||(53757039-53757150)
chr3 (238-316)||(8041654-8041732)
chr3 (226-308)||(42855625-42855707)
chr3 (238-312)||(48322415-48322489)
chr3 (198-247)||(3850508-3850557)
chr3 (234-307)||(47856421-47856494)
chr3 (206-314)||(32431506-32431614)
chr3 (209-312)||(23457988-23458091)
chr3 (281-312)||(29118619-29118650)
chr3 (196-275)||(35712040-35712119)
chr3 (238-316)||(54466461-54466539)
chr3 (202-247)||(9292245-9292290)
chr3 (203-243)||(21783403-21783443)
chr3 (238-290)||(29118565-29118617)
[»] chr8 (90 HSPs)
chr8 (198-316)||(16388838-16388956)
chr8 (200-316)||(23698556-23698672)
chr8 (200-312)||(40318280-40318392)
chr8 (200-312)||(8316904-8317016)
chr8 (200-316)||(13186060-13186176)
chr8 (200-316)||(23663826-23663942)
chr8 (200-316)||(39071676-39071792)
chr8 (199-317)||(4405971-4406089)
chr8 (200-316)||(22915670-22915786)
chr8 (197-316)||(31608825-31608944)
chr8 (203-317)||(12273164-12273278)
chr8 (197-316)||(36928476-36928592)
chr8 (200-316)||(4994969-4995084)
chr8 (201-316)||(1425334-1425448)
chr8 (226-312)||(25124589-25124675)
chr8 (199-316)||(38862617-38862734)
chr8 (226-311)||(42945429-42945514)
chr8 (198-314)||(2534693-2534809)
chr8 (200-312)||(7983428-7983540)
chr8 (226-310)||(37542250-37542334)
chr8 (197-312)||(15229928-15230043)
chr8 (226-311)||(10445650-10445735)
chr8 (200-316)||(38955703-38955819)
chr8 (238-312)||(234054-234128)
chr8 (238-312)||(710465-710539)
chr8 (238-312)||(747677-747751)
chr8 (238-312)||(871572-871646)
chr8 (226-312)||(8998003-8998089)
chr8 (200-316)||(36186379-36186492)
chr8 (219-316)||(36325253-36325350)
chr8 (200-312)||(12198950-12199062)
chr8 (200-312)||(12443378-12443490)
chr8 (200-312)||(15230245-15230357)
chr8 (198-314)||(20385566-20385682)
chr8 (219-311)||(41353593-41353685)
chr8 (199-311)||(44664507-44664619)
chr8 (238-312)||(6472004-6472078)
chr8 (238-312)||(35634413-35634487)
chr8 (198-304)||(42803542-42803648)
chr8 (226-311)||(6471716-6471801)
chr8 (197-314)||(34177284-34177401)
chr8 (238-311)||(39474584-39474657)
chr8 (219-312)||(41353887-41353980)
chr8 (226-310)||(44664824-44664908)
chr8 (200-311)||(13186376-13186487)
chr8 (197-304)||(30459368-30459475)
chr8 (226-316)||(11674721-11674811)
chr8 (226-308)||(25124881-25124963)
chr8 (198-314)||(2535864-2535980)
chr8 (200-312)||(34061644-34061756)
chr8 (200-316)||(35756584-35756698)
chr8 (209-312)||(37542539-37542642)
chr8 (200-314)||(20386744-20386858)
chr8 (226-312)||(23505078-23505164)
chr8 (202-275)||(12199259-12199332)
chr8 (202-275)||(12443687-12443760)
chr8 (200-312)||(8316653-8316765)
chr8 (256-312)||(42945170-42945226)
chr8 (198-312)||(23698306-23698421)
chr8 (200-315)||(34060489-34060604)
chr8 (226-312)||(11674979-11675065)
chr8 (202-312)||(12272920-12273030)
chr8 (197-247)||(34685638-34685688)
chr8 (238-316)||(35449890-35449968)
chr8 (198-312)||(38955988-38956102)
chr8 (203-308)||(7295247-7295352)
chr8 (201-314)||(30712031-30712143)
chr8 (201-314)||(30719808-30719920)
chr8 (203-312)||(38862879-38862988)
chr8 (200-252)||(16388583-16388635)
chr8 (272-311)||(21432765-21432804)
chr8 (200-247)||(33357498-33357545)
chr8 (202-276)||(9065667-9065741)
chr8 (226-312)||(23507741-23507827)
chr8 (238-308)||(27500127-27500197)
chr8 (238-316)||(38845580-38845658)
chr8 (203-312)||(1425056-1425165)
chr8 (202-247)||(40317966-40318011)
chr8 (206-315)||(43181465-43181574)
chr8 (256-316)||(3041737-3041797)
chr8 (200-312)||(36928792-36928904)
chr8 (238-310)||(38003493-38003565)
chr8 (200-247)||(23663545-23663592)
chr8 (200-247)||(31608527-31608574)
chr8 (226-312)||(36325519-36325605)
chr8 (238-316)||(40775931-40776009)
chr8 (243-312)||(21433007-21433076)
chr8 (256-316)||(2266548-2266608)
chr8 (226-290)||(8997882-8997946)
chr8 (256-316)||(44407138-44407198)
[»] chr4 (118 HSPs)
chr4 (200-316)||(34765692-34765808)
chr4 (200-316)||(18831349-18831465)
chr4 (200-316)||(23613309-23613425)
chr4 (200-316)||(24711111-24711227)
chr4 (200-316)||(50418949-50419065)
chr4 (200-316)||(7451834-7451950)
chr4 (200-316)||(43155808-43155924)
chr4 (200-316)||(44967350-44967466)
chr4 (202-316)||(37248238-37248352)
chr4 (200-316)||(5368947-5369063)
chr4 (200-316)||(13058037-13058153)
chr4 (205-316)||(16005843-16005954)
chr4 (202-316)||(17356234-17356348)
chr4 (200-316)||(36009125-36009242)
chr4 (200-316)||(14801736-14801852)
chr4 (200-316)||(51692553-51692669)
chr4 (202-316)||(54087007-54087121)
chr4 (200-314)||(55867428-55867542)
chr4 (226-311)||(27069225-27069310)
chr4 (200-316)||(35028310-35028426)
chr4 (201-312)||(52909254-52909365)
chr4 (226-312)||(10408203-10408289)
chr4 (202-316)||(15507985-15508098)
chr4 (200-310)||(35508558-35508668)
chr4 (226-312)||(52573254-52573340)
chr4 (226-312)||(54858874-54858960)
chr4 (226-311)||(3032608-3032693)
chr4 (219-311)||(22718254-22718346)
chr4 (219-311)||(22986870-22986962)
chr4 (208-316)||(49879488-49879596)
chr4 (200-311)||(11448046-11448157)
chr4 (202-317)||(24411360-24411475)
chr4 (238-312)||(27068948-27069022)
chr4 (242-312)||(27149310-27149380)
chr4 (226-316)||(27934558-27934648)
chr4 (226-312)||(54858586-54858672)
chr4 (219-316)||(22566818-22566915)
chr4 (226-311)||(45463099-45463184)
chr4 (226-307)||(45463392-45463473)
chr4 (200-316)||(10781796-10781912)
chr4 (192-312)||(39539234-39539354)
chr4 (200-316)||(53129818-53129934)
chr4 (201-312)||(49879208-49879319)
chr4 (226-316)||(9400800-9400890)
chr4 (226-312)||(10407915-10408001)
chr4 (202-316)||(53701814-53701928)
chr4 (219-312)||(22717958-22718051)
chr4 (219-312)||(22987165-22987258)
chr4 (219-312)||(50504139-50504232)
chr4 (219-311)||(22923157-22923249)
chr4 (219-311)||(22927810-22927902)
chr4 (219-311)||(22984089-22984181)
chr4 (219-311)||(22997677-22997769)
chr4 (200-316)||(24349674-24349790)
chr4 (200-316)||(37976465-37976581)
chr4 (225-308)||(5818093-5818176)
chr4 (238-312)||(27891622-27891696)
chr4 (226-312)||(52573542-52573628)
chr4 (226-311)||(11523975-11524060)
chr4 (203-312)||(37248521-37248630)
chr4 (226-311)||(50750913-50750998)
chr4 (198-314)||(147317-147433)
chr4 (200-312)||(148071-148183)
chr4 (200-308)||(1179120-1179228)
chr4 (203-311)||(35028001-35028109)
chr4 (219-311)||(39667091-39667183)
chr4 (200-312)||(46661230-46661342)
chr4 (200-312)||(50418668-50418780)
chr4 (200-312)||(51692835-51692947)
chr4 (200-311)||(17355925-17356036)
chr4 (200-311)||(24711397-24711508)
chr4 (226-316)||(4983007-4983097)
chr4 (200-314)||(32063650-32063764)
chr4 (226-316)||(33247554-33247644)
chr4 (238-312)||(51859720-51859794)
chr4 (200-310)||(53129506-53129616)
chr4 (198-247)||(5369248-5369297)
chr4 (226-315)||(16605628-16605717)
chr4 (226-311)||(39701224-39701309)
chr4 (226-314)||(8438307-8438394)
chr4 (200-308)||(10780713-10780821)
chr4 (200-308)||(10974322-10974430)
chr4 (226-314)||(11446296-11446384)
chr4 (199-307)||(23613599-23613707)
chr4 (200-312)||(34765380-34765492)
chr4 (226-314)||(50751812-50751899)
chr4 (264-312)||(51859471-51859519)
chr4 (197-312)||(7452119-7452234)
chr4 (243-310)||(9731528-9731595)
chr4 (197-308)||(18831637-18831748)
chr4 (226-312)||(9400545-9400631)
chr4 (238-312)||(50503863-50503937)
chr4 (203-312)||(37976156-37976265)
chr4 (200-276)||(1178057-1178132)
chr4 (200-312)||(13058298-13058410)
chr4 (200-312)||(24350748-24350860)
chr4 (200-312)||(36008844-36008956)
chr4 (200-247)||(48528485-48528532)
chr4 (238-312)||(4982764-4982838)
chr4 (198-312)||(14802051-14802165)
chr4 (238-316)||(42738312-42738390)
chr4 (197-247)||(54086692-54086742)
chr4 (226-303)||(33247300-33247377)
chr4 (202-247)||(44967071-44967116)
chr4 (256-316)||(9145047-9145107)
chr4 (203-307)||(11108161-11108265)
chr4 (203-307)||(43155532-43155636)
chr4 (201-312)||(15507674-15507785)
chr4 (200-247)||(24411729-24411776)
chr4 (263-314)||(30642460-30642511)
chr4 (184-247)||(55866095-55866158)
chr4 (197-247)||(16006174-16006224)
chr4 (280-314)||(39538160-39538194)
chr4 (282-312)||(39666858-39666888)
chr4 (238-308)||(39700947-39701017)
chr4 (256-316)||(32950198-32950258)
chr4 (256-316)||(34837355-34837415)
chr4 (200-312)||(52909569-52909681)
[»] chr1 (99 HSPs)
chr1 (198-316)||(6367560-6367678)
chr1 (200-317)||(17662161-17662278)
chr1 (209-316)||(14878980-14879087)
chr1 (199-316)||(40772506-40772623)
chr1 (197-311)||(34464446-34464560)
chr1 (203-316)||(46163033-46163146)
chr1 (200-316)||(23209639-23209755)
chr1 (201-316)||(13914379-13914494)
chr1 (195-317)||(19017940-19018062)
chr1 (200-316)||(25647884-25648000)
chr1 (200-316)||(26024423-26024539)
chr1 (200-316)||(34464761-34464877)
chr1 (200-316)||(47999404-47999520)
chr1 (200-316)||(183503-183620)
chr1 (200-312)||(7820954-7821066)
chr1 (200-316)||(37578504-37578620)
chr1 (200-315)||(17691219-17691334)
chr1 (200-314)||(5734010-5734123)
chr1 (203-316)||(24009853-24009966)
chr1 (202-316)||(40210682-40210796)
chr1 (202-316)||(42248475-42248589)
chr1 (201-317)||(4960541-4960657)
chr1 (200-313)||(41098733-41098846)
chr1 (200-316)||(19515819-19515935)
chr1 (199-315)||(30711326-30711442)
chr1 (200-316)||(35152343-35152459)
chr1 (200-316)||(36694560-36694676)
chr1 (200-316)||(36710661-36710777)
chr1 (204-316)||(1103463-1103577)
chr1 (226-312)||(40714757-40714843)
chr1 (238-311)||(12905974-12906047)
chr1 (219-312)||(20760819-20760912)
chr1 (219-312)||(35040928-35041021)
chr1 (200-312)||(13914068-13914180)
chr1 (197-316)||(34849008-34849127)
chr1 (226-311)||(17188980-17189065)
chr1 (227-316)||(28011390-28011479)
chr1 (226-311)||(28324831-28324915)
chr1 (199-316)||(34850377-34850494)
chr1 (226-311)||(40714470-40714555)
chr1 (200-312)||(26024708-26024820)
chr1 (200-312)||(48779435-48779547)
chr1 (203-313)||(17692500-17692610)
chr1 (226-316)||(32917286-32917376)
chr1 (250-316)||(43758872-43758938)
chr1 (226-308)||(45750160-45750242)
chr1 (238-312)||(49955385-49955459)
chr1 (226-312)||(49955661-49955747)
chr1 (200-312)||(32558421-32558533)
chr1 (200-312)||(45749842-45749954)
chr1 (226-312)||(8898543-8898629)
chr1 (238-304)||(17189173-17189239)
chr1 (200-274)||(19322892-19322966)
chr1 (238-312)||(31050988-31051062)
chr1 (199-312)||(183220-183333)
chr1 (226-311)||(28325119-28325203)
chr1 (200-309)||(36694282-36694391)
chr1 (200-309)||(36710383-36710492)
chr1 (219-311)||(8898832-8898924)
chr1 (238-310)||(31058373-31058445)
chr1 (226-309)||(30326522-30326605)
chr1 (256-315)||(44523449-44523508)
chr1 (200-274)||(35473631-35473705)
chr1 (226-312)||(37929444-37929530)
chr1 (256-316)||(1841515-1841575)
chr1 (200-312)||(6367878-6367990)
chr1 (200-312)||(43759138-43759250)
chr1 (198-314)||(46899059-46899175)
chr1 (200-247)||(7231630-7231677)
chr1 (200-311)||(30711644-30711755)
chr1 (197-312)||(47999120-47999235)
chr1 (200-314)||(5735025-5735139)
chr1 (226-312)||(7371316-7371402)
chr1 (197-247)||(24009572-24009622)
chr1 (226-316)||(24905448-24905537)
chr1 (226-312)||(28011653-28011739)
chr1 (226-312)||(35038481-35038567)
chr1 (201-250)||(35152708-35152757)
chr1 (200-312)||(1103777-1103889)
chr1 (200-312)||(17661852-17661963)
chr1 (220-316)||(31514598-31514694)
chr1 (226-314)||(32132330-32132418)
chr1 (203-275)||(42533027-42533099)
chr1 (203-310)||(37578195-37578302)
chr1 (200-310)||(19017629-19017739)
chr1 (226-312)||(24905193-24905279)
chr1 (238-316)||(33442875-33442953)
chr1 (203-312)||(1841775-1841883)
chr1 (265-306)||(48779182-48779223)
chr1 (207-308)||(49723046-49723147)
chr1 (200-248)||(6518176-6518224)
chr1 (203-247)||(40435348-40435392)
chr1 (203-274)||(19323246-19323317)
chr1 (192-247)||(31197057-31197112)
chr1 (204-247)||(41099114-41099157)
chr1 (200-246)||(40772841-40772887)
chr1 (201-247)||(48692395-48692441)
chr1 (263-316)||(10303986-10304039)
chr1 (199-247)||(32917641-32917689)
[»] chr5 (93 HSPs)
chr5 (200-316)||(6150454-6150570)
chr5 (200-316)||(13962864-13962980)
chr5 (200-316)||(24547437-24547553)
chr5 (198-316)||(28771150-28771268)
chr5 (200-316)||(5993889-5994005)
chr5 (193-316)||(3529154-3529277)
chr5 (197-316)||(27587145-27587264)
chr5 (202-316)||(39453302-39453416)
chr5 (203-316)||(32242245-32242358)
chr5 (203-316)||(35512151-35512264)
chr5 (200-312)||(11761749-11761861)
chr5 (200-316)||(14194735-14194850)
chr5 (200-316)||(38475311-38475427)
chr5 (202-316)||(16082979-16083093)
chr5 (200-316)||(16157167-16157283)
chr5 (200-316)||(20814447-20814563)
chr5 (200-317)||(21265452-21265570)
chr5 (201-316)||(18247087-18247200)
chr5 (200-316)||(20840533-20840649)
chr5 (203-316)||(5024330-5024443)
chr5 (198-316)||(35920496-35920614)
chr5 (203-316)||(13362540-13362653)
chr5 (200-313)||(17202399-17202512)
chr5 (212-316)||(29646674-29646777)
chr5 (200-312)||(18670202-18670311)
chr5 (207-316)||(38442075-38442184)
chr5 (197-312)||(33871336-33871451)
chr5 (226-312)||(17544362-17544448)
chr5 (238-307)||(17544086-17544155)
chr5 (202-311)||(19892625-19892734)
chr5 (226-307)||(30005179-30005260)
chr5 (200-315)||(186420-186534)
chr5 (198-308)||(21287975-21288085)
chr5 (226-316)||(41930542-41930632)
chr5 (238-310)||(8875487-8875559)
chr5 (200-312)||(14194423-14194535)
chr5 (200-316)||(28269700-28269807)
chr5 (200-316)||(11047438-11047553)
chr5 (200-310)||(16083261-16083371)
chr5 (197-311)||(17202716-17202830)
chr5 (238-312)||(20152819-20152893)
chr5 (226-308)||(22298568-22298650)
chr5 (203-312)||(11740690-11740799)
chr5 (200-305)||(20840760-20840865)
chr5 (200-312)||(3528873-3528985)
chr5 (200-312)||(6150736-6150848)
chr5 (263-311)||(33871653-33871701)
chr5 (200-307)||(29646362-29646469)
chr5 (201-312)||(35920229-35920340)
chr5 (226-316)||(6758146-6758236)
chr5 (262-316)||(8322466-8322520)
chr5 (207-289)||(24204937-24205018)
chr5 (198-312)||(27587431-27587545)
chr5 (199-312)||(186735-186848)
chr5 (200-312)||(11762033-11762145)
chr5 (226-308)||(20153236-20153315)
chr5 (200-312)||(20814136-20814247)
chr5 (200-307)||(5835623-5835730)
chr5 (213-312)||(5994205-5994304)
chr5 (201-312)||(11741833-11741944)
chr5 (201-312)||(16156856-16156967)
chr5 (256-311)||(21287799-21287854)
chr5 (198-312)||(5024017-5024131)
chr5 (226-312)||(6757891-6757977)
chr5 (200-310)||(13963147-13963257)
chr5 (201-307)||(19517928-19518034)
chr5 (202-312)||(19892310-19892420)
chr5 (200-306)||(42265735-42265841)
chr5 (202-311)||(35512431-35512540)
chr5 (219-312)||(41930801-41930894)
chr5 (220-316)||(297295-297391)
chr5 (200-312)||(28269422-28269534)
chr5 (200-312)||(32242558-32242669)
chr5 (200-312)||(39453615-39453727)
chr5 (200-247)||(28770869-28770916)
chr5 (201-312)||(38442383-38442494)
chr5 (238-316)||(31482683-31482761)
chr5 (226-311)||(5255044-5255128)
chr5 (197-306)||(5835748-5835857)
chr5 (200-312)||(6301859-6301969)
chr5 (203-312)||(11047753-11047861)
chr5 (203-312)||(43159130-43159239)
chr5 (200-244)||(18247460-18247504)
chr5 (205-312)||(8322720-8322827)
chr5 (203-242)||(31006717-31006756)
chr5 (238-316)||(1506005-1506083)
chr5 (226-312)||(21265169-21265255)
chr5 (200-274)||(24547177-24547251)
chr5 (232-313)||(5256327-5256408)
chr5 (203-247)||(21257542-21257586)
chr5 (238-314)||(24141490-24141566)
chr5 (203-247)||(27937380-27937424)
chr5 (202-246)||(37992670-37992714)
[»] chr2 (69 HSPs)
chr2 (200-316)||(44714073-44714188)
chr2 (200-316)||(11163335-11163451)
chr2 (200-316)||(15848088-15848204)
chr2 (197-316)||(37895659-37895778)
chr2 (197-316)||(16099052-16099171)
chr2 (201-316)||(36755094-36755209)
chr2 (207-316)||(39498317-39498426)
chr2 (200-316)||(6657878-6657994)
chr2 (200-316)||(36382161-36382277)
chr2 (200-316)||(45556112-45556228)
chr2 (201-316)||(2318160-2318274)
chr2 (199-316)||(22051305-22051422)
chr2 (200-316)||(39423515-39423631)
chr2 (202-312)||(36479719-36479830)
chr2 (226-312)||(8710782-8710868)
chr2 (202-316)||(10712725-10712839)
chr2 (226-312)||(15604365-15604451)
chr2 (226-310)||(28226060-28226144)
chr2 (200-316)||(34447813-34447928)
chr2 (209-312)||(15604653-15604756)
chr2 (200-314)||(25231162-25231276)
chr2 (203-312)||(6588686-6588795)
chr2 (226-316)||(6573073-6573162)
chr2 (238-312)||(8342225-8342299)
chr2 (226-315)||(6573569-6573658)
chr2 (238-311)||(11830402-11830475)
chr2 (219-308)||(41588376-41588465)
chr2 (206-314)||(202670-202778)
chr2 (200-312)||(36755404-36755516)
chr2 (226-316)||(14900764-14900852)
chr2 (238-316)||(25892432-25892510)
chr2 (198-312)||(30729619-30729733)
chr2 (219-312)||(8342493-8342586)
chr2 (199-312)||(10713039-10713152)
chr2 (200-312)||(3555250-3555362)
chr2 (225-317)||(3653391-3653482)
chr2 (200-312)||(15848404-15848516)
chr2 (200-312)||(36382443-36382555)
chr2 (200-312)||(39423831-39423943)
chr2 (204-312)||(44713799-44713907)
chr2 (199-314)||(25230101-25230216)
chr2 (200-307)||(39498600-39498707)
chr2 (200-315)||(44045315-44045430)
chr2 (200-247)||(45556428-45556475)
chr2 (200-254)||(2318884-2318938)
chr2 (198-308)||(6307038-6307147)
chr2 (199-247)||(9076448-9076496)
chr2 (200-312)||(16099340-16099452)
chr2 (200-312)||(34448111-34448223)
chr2 (200-308)||(37895347-37895455)
chr2 (238-317)||(6577588-6577667)
chr2 (197-312)||(6658163-6658278)
chr2 (238-316)||(1696021-1696099)
chr2 (226-308)||(6589679-6589761)
chr2 (198-312)||(11163052-11163166)
chr2 (197-247)||(21370583-21370633)
chr2 (256-310)||(25893536-25893590)
chr2 (238-316)||(33739741-33739819)
chr2 (202-312)||(36480034-36480144)
chr2 (199-308)||(3556329-3556438)
chr2 (211-312)||(13692536-13692637)
chr2 (263-312)||(39936563-39936612)
chr2 (263-308)||(41587297-41587342)
chr2 (238-316)||(13995954-13996032)
chr2 (200-310)||(28230057-28230167)
chr2 (238-316)||(33062331-33062409)
chr2 (226-308)||(39935481-39935563)
chr2 (238-316)||(41248840-41248918)
chr2 (226-307)||(28228696-28228777)
[»] chr7 (86 HSPs)
chr7 (197-316)||(10935791-10935910)
chr7 (200-316)||(17102020-17102136)
chr7 (200-316)||(28469320-28469436)
chr7 (200-316)||(45010916-45011032)
chr7 (201-316)||(6253472-6253587)
chr7 (199-316)||(42731418-42731535)
chr7 (201-316)||(23181306-23181421)
chr7 (201-316)||(32299017-32299132)
chr7 (203-316)||(42019909-42020022)
chr7 (200-316)||(6571013-6571129)
chr7 (200-316)||(19204489-19204605)
chr7 (200-316)||(22871589-22871705)
chr7 (200-316)||(27991739-27991855)
chr7 (199-316)||(2640490-2640608)
chr7 (200-316)||(27396907-27397023)
chr7 (226-312)||(42618225-42618311)
chr7 (197-312)||(42617908-42618023)
chr7 (200-312)||(2640178-2640290)
chr7 (200-315)||(5457220-5457335)
chr7 (205-316)||(40379774-40379885)
chr7 (202-316)||(24388821-24388935)
chr7 (226-316)||(32680876-32680966)
chr7 (198-312)||(42362448-42362562)
chr7 (226-312)||(43266580-43266666)
chr7 (238-311)||(22081874-22081947)
chr7 (226-311)||(32934663-32934748)
chr7 (203-316)||(37656855-37656968)
chr7 (238-310)||(32068134-32068206)
chr7 (226-312)||(25628504-25628590)
chr7 (209-312)||(32934357-32934460)
chr7 (226-312)||(25453154-25453240)
chr7 (238-312)||(25628792-25628866)
chr7 (226-316)||(32053455-32053545)
chr7 (226-308)||(43266292-43266374)
chr7 (238-311)||(28890617-28890690)
chr7 (226-311)||(32068411-32068496)
chr7 (226-311)||(33828289-33828374)
chr7 (226-306)||(16803967-16804047)
chr7 (200-308)||(27396629-27396737)
chr7 (226-312)||(10600263-10600349)
chr7 (197-307)||(13386068-13386178)
chr7 (238-312)||(22081598-22081671)
chr7 (238-312)||(23058467-23058541)
chr7 (238-308)||(27138259-27138329)
chr7 (198-312)||(33808321-33808435)
chr7 (200-312)||(17102305-17102417)
chr7 (256-312)||(45010654-45010710)
chr7 (200-315)||(20426643-20426758)
chr7 (225-312)||(25453442-25453529)
chr7 (256-317)||(3914194-3914255)
chr7 (238-311)||(23058744-23058817)
chr7 (200-308)||(29144302-29144410)
chr7 (199-312)||(40380000-40380113)
chr7 (263-316)||(48789115-48789168)
chr7 (200-312)||(6253756-6253868)
chr7 (200-312)||(10936110-10936222)
chr7 (226-314)||(18855968-18856056)
chr7 (202-274)||(19204812-19204884)
chr7 (200-312)||(24389101-24389213)
chr7 (200-312)||(28469010-28469122)
chr7 (200-247)||(42731800-42731847)
chr7 (226-312)||(32680621-32680707)
chr7 (238-312)||(39274908-39274982)
chr7 (232-314)||(43124466-43124548)
chr7 (226-312)||(46204447-46204533)
chr7 (238-312)||(46205623-46205697)
chr7 (203-312)||(27992024-27992133)
chr7 (198-314)||(18670177-18670293)
chr7 (200-308)||(48788803-48788911)
chr7 (256-314)||(13044728-13044786)
chr7 (238-316)||(30948441-30948519)
chr7 (200-246)||(32053143-32053189)
chr7 (200-310)||(32687397-32687507)
chr7 (200-245)||(32298777-32298822)
chr7 (198-247)||(37657218-37657267)
chr7 (201-274)||(42019598-42019671)
chr7 (201-246)||(47946856-47946901)
chr7 (201-246)||(47952286-47952331)
chr7 (200-247)||(28105501-28105548)
chr7 (200-247)||(29141557-29141604)
chr7 (200-247)||(34793904-34793951)
chr7 (256-314)||(12229386-12229444)
chr7 (238-316)||(34928931-34929009)
chr7 (238-316)||(39686815-39686893)
chr7 (226-314)||(32688532-32688620)
chr7 (199-247)||(43123174-43123222)
[»] chr6 (60 HSPs)
chr6 (203-316)||(33517537-33517650)
chr6 (200-316)||(30337449-30337565)
chr6 (200-316)||(21628025-21628141)
chr6 (201-316)||(17734475-17734590)
chr6 (203-316)||(3059260-3059373)
chr6 (202-316)||(12080638-12080752)
chr6 (200-312)||(21836344-21836456)
chr6 (226-312)||(7160830-7160916)
chr6 (199-316)||(30725759-30725875)
chr6 (203-316)||(30803864-30803977)
chr6 (200-312)||(17734196-17734308)
chr6 (184-315)||(26463162-26463294)
chr6 (200-314)||(8089443-8089557)
chr6 (226-312)||(21836058-21836143)
chr6 (226-312)||(22502800-22502886)
chr6 (226-312)||(31407192-31407278)
chr6 (226-312)||(6517529-6517614)
chr6 (226-311)||(7161119-7161204)
chr6 (226-311)||(7905269-7905354)
chr6 (226-311)||(15913574-15913659)
chr6 (226-311)||(22503089-22503174)
chr6 (200-314)||(8090241-8090355)
chr6 (226-316)||(14196896-14196986)
chr6 (199-312)||(30337734-30337847)
chr6 (226-311)||(32593516-32593601)
chr6 (207-316)||(33646970-33647079)
chr6 (200-312)||(12080952-12081064)
chr6 (200-312)||(33517850-33517962)
chr6 (228-311)||(11392866-11392949)
chr6 (199-314)||(12407507-12407622)
chr6 (200-307)||(12408492-12408599)
chr6 (197-312)||(15115336-15115451)
chr6 (226-311)||(7905558-7905643)
chr6 (234-315)||(25486208-25486289)
chr6 (200-312)||(681044-681156)
chr6 (200-308)||(3059576-3059684)
chr6 (200-312)||(21627713-21627825)
chr6 (200-312)||(30726075-30726187)
chr6 (200-312)||(33647267-33647379)
chr6 (202-312)||(11434804-11434914)
chr6 (200-314)||(13379796-13379910)
chr6 (197-315)||(15116545-15116663)
chr6 (226-312)||(31406904-31406990)
chr6 (200-312)||(679866-679978)
chr6 (238-309)||(12065258-12065329)
chr6 (200-312)||(20651010-20651122)
chr6 (256-316)||(28000666-28000726)
chr6 (225-316)||(24210556-24210647)
chr6 (238-312)||(25485991-25486065)
chr6 (197-305)||(8418359-8418466)
chr6 (203-247)||(30804242-30804286)
chr6 (200-247)||(11393185-11393232)
chr6 (238-316)||(363111-363189)
chr6 (226-312)||(14196641-14196727)
chr6 (226-312)||(15913862-15913948)
chr6 (199-277)||(26464550-26464628)
chr6 (238-307)||(22372978-22373047)
chr6 (263-307)||(10781477-10781521)
chr6 (203-247)||(22617886-22617930)
chr6 (226-314)||(28498339-28498427)
[»] scaffold0031 (2 HSPs)
scaffold0031 (198-316)||(68963-69081)
scaffold0031 (197-312)||(69281-69396)
[»] scaffold0007 (2 HSPs)
scaffold0007 (200-316)||(1769-1885)
scaffold0007 (200-310)||(2059-2169)
[»] scaffold0020 (2 HSPs)
scaffold0020 (203-316)||(139675-139788)
scaffold0020 (198-247)||(140022-140071)
[»] scaffold0005 (2 HSPs)
scaffold0005 (200-316)||(37875-37991)
scaffold0005 (198-312)||(37562-37676)
[»] scaffold0328 (2 HSPs)
scaffold0328 (200-311)||(11455-11566)
scaffold0328 (261-312)||(11201-11252)
[»] scaffold0006 (2 HSPs)
scaffold0006 (226-312)||(222103-222189)
scaffold0006 (226-312)||(221817-221902)
[»] scaffold0771 (1 HSPs)
scaffold0771 (238-312)||(958-1032)
[»] scaffold0388 (2 HSPs)
scaffold0388 (226-310)||(12555-12639)
scaffold0388 (256-311)||(12296-12351)
[»] scaffold0599 (1 HSPs)
scaffold0599 (238-312)||(2431-2505)
[»] scaffold0205 (2 HSPs)
scaffold0205 (226-316)||(21250-21340)
scaffold0205 (226-307)||(21035-21116)
[»] scaffold0128 (1 HSPs)
scaffold0128 (197-310)||(19854-19967)
[»] scaffold0707 (1 HSPs)
scaffold0707 (200-312)||(6395-6507)
[»] scaffold0042 (1 HSPs)
scaffold0042 (256-312)||(12094-12150)
[»] scaffold0008 (1 HSPs)
scaffold0008 (228-314)||(239865-239951)
[»] scaffold0075 (2 HSPs)
scaffold0075 (190-307)||(14419-14536)
scaffold0075 (198-279)||(14739-14820)
[»] scaffold0775 (2 HSPs)
scaffold0775 (200-312)||(4962-5074)
scaffold0775 (226-310)||(6296-6380)
[»] scaffold0024 (1 HSPs)
scaffold0024 (256-316)||(141875-141935)
[»] scaffold0559 (1 HSPs)
scaffold0559 (238-316)||(1271-1349)
[»] scaffold0295 (1 HSPs)
scaffold0295 (272-316)||(2215-2259)


Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 13 - 312
Target Start/End: Original strand, 36417500 - 36417800
Alignment:
Q  13 aatatgttaggtaaatggaataaaaagaaacgtaggtatttaattttcttgaacatcataaaacttgatacatccaaattcatgacagataagcaacatg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36417500 aatatgttaggtaaatggaataaaaagaaacgtaggtatttaattttcttgaacatcataaaacttgatacatccagattcatgacagataagcaacatg 36417599  T
Q  113 tccaaatcaactacat-atttttaagggatcaagtctatagtgcaatgcataagggatatttgtcttgtagtatatataaatttgtttggcttaaatatg 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  36417600 tccaaatcaactacataatttttaagggatcaagtctatagtgcaatgcataagggatatttgtcttgtagtatatataaatttgtttggtttaaacatg 36417699  T
Q  212 tattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    | ||| |||||| ||||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||||||||||||||    
T  36417700 tctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 36417799  T
Q  312 c 312  Q
    |    
T  36417800 c 36417800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 42342791 - 42342907
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| || ||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  42342791 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcatt 42342890  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  42342891 taaaatttcgtccctct 42342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 9294387 - 9294270
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| ||||||||||||||||||    
T  9294387 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcat 9294288  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  9294287 ttaaaatttcgtccctct 9294270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 33689807 - 33689691
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||| ||||||||||    
T  33689807 ggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 33689708  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  33689707 taaaatttcgtccctct 33689691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 40033884 - 40033768
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |||  | |||||||||||||||||||||||| |||||||||||||||||||    
T  40033884 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcatt 40033785  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  40033784 taaaattttgtccctct 40033768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 2796179 - 2796295
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||    
T  2796179 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 2796278  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  2796279 taaaatttcgtccctct 2796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 19741320 - 19741204
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||| ||||||||||| |||| ||||||||||||||    
T  19741320 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcatt 19741221  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  19741220 taaaatttcgtcactct 19741204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 23458407 - 23458291
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||| ||   | |||| ||||||||| ||||||||| |||||||||||||||||||    
T  23458407 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatt 23458308  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  23458307 taaaatttcgtccctct 23458291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 40758144 - 40758260
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| |||| ||||||||| ||||||||| |  |||||||||||||    
T  40758144 tttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttaccc--gcattgtttaatc 40758240  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  40758241 atttaaaatttcgtccctct 40758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 51994313 - 51994198
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||| ||||||||||||| || | | |||| |||||| |||||||||||| | ||||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  51994213 aaaatttcgtccctct 51994198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 55052677 - 55052560
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||||||| || ||| |||| | ||||| |||||||||||   |||||||||||||||    
T  55052677 ttggcttaaatatgtatttgatccttgtaattaggggtt-tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatca 55052579  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  55052578 tttaaaatttcgtccctct 55052560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 3469226 - 3469312
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3469226 aattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 3469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 3469600 - 3469514
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  3469600 aattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattccgtcc 3469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 32306450 - 32306536
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  32306450 aattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 32306536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 37778673 - 37778591
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37778673 aattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 37778591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 40788820 - 40788734
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40788820 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaaaatttcgtcc 40788734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 53756747 - 53756861
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||||  ||||| |||| | ||||| | | ||||||| ||||||||||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaa 53756846  T
Q  303 aatttcgtccctctt 317  Q
    |||||||||| ||||    
T  53756847 aatttcgtccatctt 53756861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 32306824 - 32306739
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||  || |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32306824 aattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 32306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 46474818 - 46474931
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||| ||  |||||||||||||||||||||| ||   | |||| ||||||| |||||||||||  |||||||||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaa 46474917  T
Q  303 aatttcgtccctct 316  Q
    ||||| ||||||||    
T  46474918 aattttgtccctct 46474931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 13948818 - 13948892
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  13948818 tttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 13948892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 35643877 - 35643963
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  35643877 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcc 35643963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 36418118 - 36418004
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| | || | ||||||||| ||||  ||  |||||| |  |||||||    
T  36418118 ttggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatca 36418019  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  36418018 tttaaaatttcgtcc 36418004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 10294947 - 10294875
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||||||||||| | |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  10294947 tttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatcatttaaaatttcgt 10294875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 52032147 - 52032250
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||| |||| |||||  ||||||| ||| ||||||||||| | | | |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  52032147 atgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 52032246  T
Q  309 gtcc 312  Q
    ||||    
T  52032247 gtcc 52032250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 10294593 - 10294679
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||||||||||| || |||||||| |||| |||||||||||||||||||||||||||    
T  10294593 aattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatttaaaatttcgtcc 10294679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 10307763 - 10307689
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||   | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10307763 tttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 10307689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 29118938 - 29118852
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||||||   | |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29118938 aattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaaatttcgtcc 29118852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 33506338 - 33506264
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  33506338 tttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaattttgtcc 33506264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 29685950 - 29686051
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||  |||||  ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||  ||||||||||||||||||||||||||||    
T  29685950 atgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaatttc 29686049  T
Q  309 gt 310  Q
    ||    
T  29686050 gt 29686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 42343156 - 42343047
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||  | ||| || | ||||||| | |||| ||| ||||||| || ||||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaa 42343057  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  42343056 aatttcgtcc 42343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 9368723 - 9368619
Alignment:
Q  206 aatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaat 305  Q
    |||||||||||  |||||  |||||||||||||||||||||| || | | ||||   ||||||| |||| |||||||| |||||||||||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaat 9368624  T
Q  306 ttcgt 310  Q
    |||||    
T  9368623 ttcgt 9368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Complemental strand, 41558306 - 41558198
Alignment:
Q  204 taaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaa 303  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| | ||| || | ||||||||| |||| ||| ||||||| |  |||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaa 41558207  T
Q  304 atttcgtcc 312  Q
    |||||||||    
T  41558206 atttcgtcc 41558198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 43384283 - 43384399
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||| |||||||||||  ||| ||  ||||| || || |||||||||| || | | |||| |||||||||| |||||||| |||||||||||||||||||    
T  43384283 ggctgaaatatgtattccatctttgcaattacggatcctttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 43384382  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  43384383 taaaatttcgtctctct 43384399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 11910737 - 11910811
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||| | | | |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  11910737 tttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcc 11910811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 33156396 - 33156307
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctc 315  Q
    ||||||| ||| ||||||||||||| |||| |||| | ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33156396 aattaggcgtcatttaaaaattagt-cattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttcgtccctc 33156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 36314669 - 36314579
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || | | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  36314669 aattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 36314579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 40506213 - 40506099
Alignment:
Q  203 ttaaatatgtattttatccttataatta-ggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    |||||||||||||| ||||||  ||||| |||||| ||||||| || |||| | |||| | |||||||| |||||||| ||| |||| ||||||||||||    
T  40506213 ttaaatatgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcattta 40506114  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||| ||||    
T  40506113 aaatttcgtctctct 40506099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 43998170 - 43998256
Alignment:
Q  225 taattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||||| | ||| ||||||||||||| | | |||| | |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43998170 taattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 43998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 47551531 - 47551601
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||||||| | | |||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  47551531 tttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatttaaaatttc 47551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 48322748 - 48322658
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || | | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  48322748 aattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 48322658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 52032527 - 52032457
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||||||| | | |||| ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  52032527 tttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcatttaaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 4323604 - 4323519
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| |||||||||||||| || | | |||| |||||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  4323604 aattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 4323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 10770869 - 10770772
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||| ||||||| ||| |||||||||| || | | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  10770869 tccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 10770772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 40758538 - 40758426
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||| ||  || || | ||||||||| ||||  || ||||||| |  |||||||||    
T  40758538 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 40758439  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  40758438 taaaatttcgtcc 40758426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 41988587 - 41988698
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    ||||||||||||||  ||||||||| || ||||| |||||||||| || | | || |  ||||| || |||| ||||||||||||| |||||||||||||    
T  41988587 ttaaatatgtatttcctccttataaataagggtcatttaaaaattggtccctgtattcactaattcttgcaaattactcttgcattctttaatcatttaa 41988686  T
Q  303 aatttcgtccct 314  Q
    | ||||||||||    
T  41988687 attttcgtccct 41988698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 21186123 - 21186009
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| ||||||| |||| ||| |  ||||||||||| |||||||||| || ||| |||| | |||||||||||| |||| ||||||    |||||||||    
T  21186123 ggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatt 21186024  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  21186023 taaaatttcgtccct 21186009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 29686340 - 29686259
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||| ||| ||| ||||||||| |||| ||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  29686340 aattaggcgtcattttaaaattagt-cattgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaattt 29686259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 41421998 - 41422083
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| |||  |||||||||||||| | |||| | ||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  41421998 aattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcatttaaaatttcgtc 41422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 3596147 - 3596219
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||||||||||||  || |||| |||||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  3596147 tttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcatttaaaatttcgt 3596219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 4322618 - 4322705
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||| |||||||||||||| || | | |||| |||||||||| ||| |||  |||||||||||||||||||||||| |||||||||    
T  4322618 aattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtccct 4322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 9367741 - 9367856
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| || |||||||||||||||||||| | ||   | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  9367741 ggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatcatt 9367840  T
Q  300 taaaatttcgtccctc 315  Q
    ||||||||||||||||    
T  9367841 taaaatttcgtccctc 9367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 10770516 - 10770602
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  10770516 aattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 10770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 36314324 - 36314410
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  36314324 aattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 36314410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 55052289 - 55052339
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||    
T  55052289 tttggtttaaatatgtatttgatccttataattaggggtcgtctaaaaatt 55052339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 1079649 - 1079536
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| ||||||| ||| |||| |  ||||||||||| |||||||||| || | | |||| | |||||||||||| |||  ||||||  |||||||| ||    
T  1079649 ggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttt 1079550  T
Q  300 taaaatttcgtccc 313  Q
    ||||||||||||||    
T  1079549 taaaatttcgtccc 1079536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 26463635 - 26463744
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||  | | | || | | ||||||| |||| ||| ||||||| |  ||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatttaa 26463734  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  26463735 aatttcgtcc 26463744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 33689364 - 33689493
Alignment:
Q  180 tagtatatataaatttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttac 279  Q
    ||||||||||||||||    ||||||||||||||||| ||||||  |||||||||||||||||||||| | |||| || | |||||| || ||||  ||     
T  33689364 tagtatatataaatttaa--ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-ggtcatgtattcgctaattcttgcaaactag 33689460  T
Q  280 tcttgcattgtttaatcatttaaaatttcgtcc 312  Q
     |||||| |  ||||||||||||||||| ||||    
T  33689461 ccttgcaatcattaatcatttaaaattttgtcc 33689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 40788458 - 40788531
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||| | | |||| |||||| ||| ||||||||  ||||||| ||||||||||||||||||||||    
T  40788458 tttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatcatttaaaatttcgtc 40788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 46475205 - 46475097
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |  | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaatt-gatactgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 46475107  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  46475106 aatttcgtcc 46475097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 6956274 - 6956362
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||||| || ||||||||||||| | | |||| | |||||||||||| |||| ||||||   || ||||||||||||||||||||||    
T  6956274 aattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttcgtccct 6956362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 19740923 - 19741035
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| || | |  |||||||| ||||||||||||| || | | |||| ||||||||| ||||  ||  |||||| |  |||||||||    
T  19740923 ggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatt 19741022  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  19741023 taaaatttcgtcc 19741035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 26463954 - 26463910
Alignment:
Q  272 caatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  26463954 caatttacccttgtattgtttaatcatttaaaatttcgtccctct 26463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 34142647 - 34142599
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  34142647 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaatt 34142599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 36150530 - 36150606
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttac 279  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | || ||| |||||||| ||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatatttgttaatcctgacaatttac 36150606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 41558008 - 41558119
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| || |||  ||||| |||||||||||||||| || | | || | ||||||||| |||  |||  |||||| |  |||||||||    
T  41558008 ggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatcatt 41558107  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  41558108 taaaatttcgtc 41558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 53757150 - 53757039
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| || |||  ||||||  |||||||||||||| || ||| || | ||||||||| ||||  ||  |||||| |  ||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  53757050 aaaatttcgtcc 53757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 8041654 - 8041732
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  8041654 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 8041732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 42855707 - 42855625
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| ||||||||||||| ||| || | ||||||||| ||||  ||  |||||||| |||||||||||||||||||    
T  42855707 aattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttc 42855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 48322415 - 48322489
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  48322415 tttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 48322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 3850557 - 3850508
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  3850557 ttggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaatt 3850508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 47856421 - 47856494
Alignment:
Q  234 gtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    |||||||||||||| || | | |||| | |||||||| ||| |||||||||||  |||||||||||||||||||    
T  47856421 gtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 32431614 - 32431506
Alignment:
Q  206 aatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaat 305  Q
    |||||||||||  ||| | |||||||||||| |||||||||| || | |  ||| | |||||||| ||| |||  ||||||  |||||| ||||||||||    
T  32431614 aatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaat 32431515  T
Q  306 ttcgtccct 314  Q
    |||||||||    
T  32431514 ttcgtccct 32431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 23457988 - 23458091
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  309 gtcc 312  Q
    ||||    
T  23458088 gtcc 23458091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 312
Target Start/End: Original strand, 29118619 - 29118650
Alignment:
Q  281 cttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||||||||||||||||||||||    
T  29118619 cttgcattgtttaatcatttaaaatttcgtcc 29118650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 35712040 - 35712119
Alignment:
Q  196 gtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaat 275  Q
    |||| |||||||||||||||| ||||||  |||||||| || |||||||||| || ||| || | ||||||||| |||||    
T  35712040 gttttgcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaat 35712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 54466461 - 54466539
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||| ||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  54466461 tttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 54466539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 9292245 - 9292290
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||| ||||||  |||||||| |||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaatt 9292290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 21783403 - 21783443
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaa 243  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgtttaaa 21783443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 29118565 - 29118617
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgt 290  Q
    ||||||||||||| | | |||| |||||| |||||||||||| ||||||||||    
T  29118565 tttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgt 29118617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 90)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 16388956 - 16388838
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16388956 ttggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatca 16388857  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  16388856 tttaaaatttcgtccctct 16388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 23698672 - 23698556
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||    
T  23698672 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 23698573  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  23698572 taaaatttcgtccctct 23698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 40318392 - 40318280
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||| |||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  40318392 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 40318293  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  40318292 taaaatttcgtcc 40318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 8317016 - 8316904
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||    
T  8317016 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 8316917  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  8316916 taaaatttcgtcc 8316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 13186060 - 13186176
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| |||| |||||||||| |||||||| |||||||||||||||||||    
T  13186060 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 13186159  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  13186160 taaaatttcgtctctct 13186176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 23663942 - 23663826
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | |||| ||||||||||||||||||| |||||||||||||||||||    
T  23663942 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 23663843  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  23663842 taaaatttcgtccctct 23663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 39071676 - 39071792
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||||||| |||||||| |||||||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  39071776 taaaatttcgtccctct 39071792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 4406089 - 4405971
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||| || ||| || ||| ||||||| ||||||||| |||||| |||||||||||    
T  4406089 tggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcat 4405990  T
Q  299 ttaaaatttcgtccctctt 317  Q
    |||||||||||||||||||    
T  4405989 ttaaaatttcgtccctctt 4405971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 22915786 - 22915670
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  || ||||| ||||||||||||| || ||| |||| ||||||| ||||||||||| |||||||||||||||||||    
T  22915786 ggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 22915687  T
Q  300 taaaatttcgtccctct 316  Q
    ||||||| |||||||||    
T  22915686 taaaattccgtccctct 22915670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 31608944 - 31608825
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||||| |||||| ||||||  ||||| |||||||||||||||| || ||| || | ||||||||| ||||||||| |||||||||| |||||    
T  31608944 tttggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatc 31608845  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  31608844 atttaaaatttcgtccctct 31608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 12273278 - 12273164
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | |||||| | |||||||| ||||||||||||||||||||||    
T  12273278 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaa 12273179  T
Q  303 aatttcgtccctctt 317  Q
    |||||||||||||||    
T  12273178 aatttcgtccctctt 12273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 36928476 - 36928592
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||||||||||||   ||||  ||||| |||||||||||||||| ||  || |||| |||||||||| |||||||| ||||||||||||||||    
T  36928476 tttggcttaaatatgtattt---cctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 36928572  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  36928573 atttaaaatttcgtccctct 36928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 4995084 - 4994969
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | |||| |||||||||| |||||||| |||||||||||||||||||    
T  4995084 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 4994986  T
Q  300 taaaatttcgtccctct 316  Q
    | |||||||||||||||    
T  4994985 tcaaatttcgtccctct 4994969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 1425448 - 1425334
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||| ||||| |||||| ||||||| ||||||||||||||| || | | ||||  |||||||||||||||||| | ||||||||||||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggtcc-tgtaatcactaatcctggcaatttacccctgcattgtttaatcattt 1425350  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  1425349 aaaatttcgtccctct 1425334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 25124589 - 25124675
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25124589 aattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 25124675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 38862617 - 38862734
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||| ||| ||||||||| ||  ||||| |||| |||||| |||| |||||||  |||||||||||||||||    
T  38862617 tggcttaaatatgtatttcatccttgcaattaagggccgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcat 38862716  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  38862717 ttaaaatttcgtccctct 38862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 42945514 - 42945429
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42945514 aattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 42945429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 2534693 - 2534809
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    |||||||||||||||||||   || |  ||||| |||||||||||||||| || ||| |||| ||||||||| ||||  |||||||||||||||||||||    
T  2534693 ttggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatca 2534792  T
Q  298 tttaaaatttcgtccct 314  Q
    |||||||||||||||||    
T  2534793 tttaaaatttcgtccct 2534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 7983428 - 7983540
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||| ||||| |||  |||||  ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| |||||||||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 7983527  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  7983528 taaaatttcgtcc 7983540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 37542250 - 37542334
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||| ||| ||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37542250 aattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 37542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 15229928 - 15230043
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||  |||| |||| |||||  ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| |||| |||||||||||    
T  15229928 tttggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatc 15230027  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||||||||    
T  15230028 atttaaaatttcgtcc 15230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 10445735 - 10445650
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10445735 aattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 10445650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 38955703 - 38955819
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||||||||| ||||||  |||| ||| ||||||||||||| || |||| |||| ||||||||||| ||||||| | ||||||||||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggt-cattgtaatcgctaatcctggtaatttacccctgcattgtttaatcat 38955801  T
Q  299 ttaaaatttcgtccctct 316  Q
    |||||||||| |||||||    
T  38955802 ttaaaatttcatccctct 38955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 234128 - 234054
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  234128 tttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 710539 - 710465
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  710539 tttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 710465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 747751 - 747677
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  747751 tttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 747677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 871646 - 871572
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  871646 tttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 8998089 - 8998003
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||| || |||||||| |||||||||||||||||||||||||| |||||    
T  8998089 aattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcatttaaaattccgtcc 8998003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 36186492 - 36186379
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||| |  | || | |||| |||||||||| ||||||||  ||||||||||||||||||    
T  36186492 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaatt--ggtc-tataatcgctaatcctgacaatttacctttgcattgtttaatcatt 36186396  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  36186395 taaaatttcgtccctct 36186379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 36325253 - 36325350
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||| |||||||||||||||||||||| || | | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  36325253 tccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 36325350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 12198950 - 12199062
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||| ||||  || ||||||| |  |||||||||    
T  12198950 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatt 12199049  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  12199050 taaaatttcgtcc 12199062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 12443378 - 12443490
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||| ||||  || ||||||| |  |||||||||    
T  12443378 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatt 12443477  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  12443478 taaaatttcgtcc 12443490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 15230357 - 15230245
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||  |||| |||| |||||  ||||||| ||| ||||||||||||| | | |||| ||||||| || |||||||| |||||||||||||||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcatt 15230258  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  15230257 taaaatttcgtcc 15230245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 20385566 - 20385682
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  |||||||    
T  20385566 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 20385665  T
Q  298 tttaaaatttcgtccct 314  Q
    |||||||||||||||||    
T  20385666 tttaaaatttcgtccct 20385682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 41353593 - 41353685
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||||| ||||||| ||| ||||||||||||||  | |||| |||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  41353593 tccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtc 41353685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 44664507 - 44664619
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||| ||||| |||  |||||  ||||||| ||| ||||||||||||| | | |||| | ||||||||||||||||  ||||||||||||||||||    
T  44664507 tggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcat 44664606  T
Q  299 ttaaaatttcgtc 311  Q
    |||||||||||||    
T  44664607 ttaaaatttcgtc 44664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 6472078 - 6472004
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||||||| |||| || ||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcc 6472004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 35634487 - 35634413
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35634487 tttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 35634413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 42803648 - 42803542
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||  |||||||||||||| || | | ||||  | |||| ||||||||||| |||||||||||||||||    
T  42803648 ttggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatca 42803549  T
Q  298 tttaaaa 304  Q
    |||||||    
T  42803548 tttaaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 6471716 - 6471801
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||| |||   | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6471716 aattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 6471801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 34177401 - 34177284
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||| ||||||||||||||| ||| || ||||||||||||||||||||||| || | | || | ||||||||| | ||  ||  |||||||| |||||||    
T  34177401 tttgacttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatc 34177302  T
Q  297 atttaaaatttcgtccct 314  Q
    ||||||||||||||||||    
T  34177301 atttaaaatttcgtccct 34177284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 39474584 - 39474657
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||| ||| | |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  39474584 tttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 39474657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 41353980 - 41353887
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||| ||| ||||||||||||| | | ||||  ||||||||| |||||||| || ||||| |||||||||||||||||||||||    
T  41353980 tccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatcatttaaaatttcgtcc 41353887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 44664908 - 44664824
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||| ||| |||||||||||||   | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  44664908 aattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgt 44664824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 13186487 - 13186376
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||| ||||| ||||||  |||||||||||||||||||||| |||||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  13186487 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 13186388  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  13186387 taaaatttcgtc 13186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 30459368 - 30459475
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||  || || |  |||||||| |||| ||||  ||||||| |||||||    
T  30459368 tttggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatc 30459467  T
Q  297 atttaaaa 304  Q
    | ||||||    
T  30459468 acttaaaa 30459475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 11674721 - 11674811
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || | | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  11674721 aattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 11674811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 25124963 - 25124881
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| |||||||||||||   | |||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  25124963 aattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 25124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 2535980 - 2535864
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||| |||||||||||  ||| |  ||||||||||| |||||||||| || | | |||| | |||||||||||| |||| ||| ||  |||||||||    
T  2535980 ttggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatca 2535881  T
Q  298 tttaaaatttcgtccct 314  Q
    |||||||||||||||||    
T  2535880 tttaaaatttcgtccct 2535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 34061756 - 34061644
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||  ||||||  ||||||  ||||||||||||||  | ||| || | ||||||||| |||| || | |||||||| ||||||||||    
T  34061756 ggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcatt 34061657  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  34061656 taaaatttcgtcc 34061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 35756584 - 35756698
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| |   ||||||||||| |||||||||| || | | ||||  ||||||||| |||||||  |||| ||||||||||||||    
T  35756584 ggcttaaatatgtatttcatcatgc-aattaggggtcatttaaaaattggt-cttataatcactaatcctgacaatttatccttgaattgtttaatcatt 35756681  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  35756682 taaaatttcgtccctct 35756698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 37542642 - 37542539
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||| ||| ||||||| ||||||| ||| |||||||||| |||| | | || | |||| |||  ||||||| ||||||||||||||||||||||||||||    
T  37542642 atgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaaaatttc 37542543  T
Q  309 gtcc 312  Q
    ||||    
T  37542542 gtcc 37542539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 20386858 - 20386744
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  || ||| |  |||||||||    
T  20386858 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcatt 20386759  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  20386758 taaaatttcgtccct 20386744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 23505078 - 23505164
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || ||| |||||||||||| ||||||||||| |||||| |  ||||||||||||||||| ||||    
T  23505078 aattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatttaaaatttggtcc 23505164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 12199332 - 12199259
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaat 275  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| || | | |||| ||||||||| |||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaat 12199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 12443760 - 12443687
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaat 275  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| || | | |||| ||||||||| |||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaat 12443687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 8316653 - 8316765
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||| |||| ||||||  |||||||||||||||||||||| || ||| || | | ||||||| ||||  ||  |||||| |  |||||||||    
T  8316653 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcatt 8316752  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  8316753 taaaatttcgtcc 8316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 42945170 - 42945226
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||    
T  42945170 taattgctaatcctgacaatttacccttatattgtttaatcatttaaaatttcgtcc 42945226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 23698306 - 23698421
Alignment:
Q  198 ttggcttaaatatgtattttatccttataatta-ggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||||||||| | | |||| |||||| || ||||  ||  |||||| |  ||||||    
T  23698306 ttggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatc 23698405  T
Q  297 atttaaaatttcgtcc 312  Q
    | ||||||||||||||    
T  23698406 agttaaaatttcgtcc 23698421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 34060489 - 34060604
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||   |||||||||||||| || ||| |||| ||||||||| |||| ||    ||||||| ||||||||||    
T  34060489 ggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatcatt 34060588  T
Q  300 taaaatttcgtccctc 315  Q
    ||||| ||| ||||||    
T  34060589 taaaacttcatccctc 34060604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 11675065 - 11674979
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  11675065 aattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 11674979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 12272920 - 12273030
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||| ||||||||||||| ||   | |||| ||||||||| ||||  ||  |||||| |  |||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  302 aaatttcgtcc 312  Q
    |||||||||||    
T  12273020 aaatttcgtcc 12273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 34685688 - 34685638
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  34685688 tttggcttaaatatgtattttatccttgcaattagggatcgtttaaaaatt 34685638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 35449968 - 35449890
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || ||| |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  35449968 tttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 35449890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 38956102 - 38955988
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| | ||  ||  |||||| |  |||||||    
T  38956102 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatca 38956003  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||| ||||    
T  38956002 tttaaaatttagtcc 38955988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 7295352 - 7295247
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||||||||||  ||||| || ||||||||||||  || | | || | ||||||||| ||||  || ||||||||| ||||||| |||||    
T  7295352 ttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcgtttaa 7295253  T
Q  303 aatttc 308  Q
    ||||||    
T  7295252 aatttc 7295247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 314
Target Start/End: Complemental strand, 30712143 - 30712031
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||   |||||||| |||||||||||| | || | || ||||||||||| ||||  ||  |||||| |  ||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaatt-ggtcctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  301 aaaatttcgtccct 314  Q
    ||||||||||||||    
T  30712044 aaaatttcgtccct 30712031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 314
Target Start/End: Complemental strand, 30719920 - 30719808
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||   |||||||| |||||||||||| | || | || ||||||||||| ||||  ||  |||||| |  ||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaatt-ggtcctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  301 aaaatttcgtccct 314  Q
    ||||||||||||||    
T  30719821 aaaatttcgtccct 30719808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 38862988 - 38862879
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 38862889  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  38862888 aatttcgtcc 38862879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 16388583 - 16388635
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttc 252  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||    
T  16388583 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttc 16388635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 21432765 - 21432804
Alignment:
Q  272 caatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21432765 caatttacccttgcattgtttaatcatttaaaatttcgtc 21432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 33357498 - 33357545
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  33357498 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 33357545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 9065667 - 9065741
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatt 276  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||| || | | |||| | |||||||| |||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatt 9065741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 23507827 - 23507741
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||  || | | |||||||||||||| ||||||||| |||||| |  ||||||||||||||||| ||||    
T  23507827 aattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatttaaaatttggtcc 23507741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 27500127 - 27500197
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||||||| |||  ||| |||||| ||| ||| |||||| |||||||||||||||| |||||||||    
T  27500127 tttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcatataaaatttc 27500197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 38845658 - 38845580
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  38845658 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 38845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 1425056 - 1425165
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | || |  |||||||| ||||  ||  |||||| |  ||||||||||||    
T  1425056 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 1425155  T
Q  303 aatttcgtcc 312  Q
    ||||| ||||    
T  1425156 aatttagtcc 1425165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 40317966 - 40318011
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 40318011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 43181574 - 43181465
Alignment:
Q  206 aatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaat 305  Q
    |||||||||||  || || ||||||||| |||||||||||||  | |||  ||| | ||||||| | || |||  ||| |||||||||||||||||||||    
T  43181574 aatatgtatttcgtctttgtaattagggatcgtttaaaaattgatccatgcaatcgttaatccttgtaaattagccttacattgtttaatcatttaaaat 43181475  T
Q  306 ttcgtccctc 315  Q
    ||||| ||||    
T  43181474 ttcgttcctc 43181465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 3041797 - 3041737
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  3041797 taattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 3041737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 36928904 - 36928792
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| ||  ||||||   ||||||||||||| ||  || || ||||||||||| ||||  ||  |||||| |  |||||||||    
T  36928904 ggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcatt 36928805  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  36928804 taaaatttcgtcc 36928792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 38003493 - 38003565
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||||||||||  | |||| ||||||  || |||||||  |||| |||||||||||||||||||||||||    
T  38003493 tttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcatttaaaatttcgt 38003565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 23663545 - 23663592
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  23663545 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaatt 23663592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 31608527 - 31608574
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||||    
T  31608527 ggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaatt 31608574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 36325605 - 36325519
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| ||   | |||||| ||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  36325605 aattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 36325519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 40776009 - 40775931
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | ||||||||||||||| || ||||  | |||| |  ||||||||||||||||||||||||||    
T  40776009 tttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctct 40775931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 21433076 - 21433007
Alignment:
Q  243 aaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||| ||| |||| | ||||  || |||||||| ||||||||||||||||||||| ||| ||||||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgcattgtttaatcatttacaatgtcgtcc 21433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 2266548 - 2266608
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  2266548 taattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 2266608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 8997882 - 8997946
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgt 290  Q
    ||||||| ||| ||||||||||||| | |  ||| |||||||||| |||||||| ||||||||||    
T  8997882 aattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 44407198 - 44407138
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||| ||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  44407198 taattgctaatcctagcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 44407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 7e-43; HSPs: 118)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 34765808 - 34765692
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||| |||||||||||||||||||  ||||||||||||||||||    
T  34765808 ggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 34765709  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  34765708 taaaatttcgtccctct 34765692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 18831349 - 18831465
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| || | | |||| ||||||||||| ||||||| |||||||||||||||||||    
T  18831349 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatt 18831448  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  18831449 taaaatttcgtctctct 18831465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 23613309 - 23613425
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| |||| ||||||| ||||||||||| | |||||||||||||||||    
T  23613309 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcatt 23613408  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  23613409 taaaatttcgtccctct 23613425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 24711111 - 24711227
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||||||||||||||||  ||||||||||||||||||    
T  24711111 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcatt 24711210  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  24711211 taaaatttcgtccctct 24711227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 50419065 - 50418949
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||| ||| |||||||||||||||||||    
T  50419065 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatt 50418966  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  50418965 taaaatttcgtccctct 50418949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 7451834 - 7451950
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||||||||||||| | |||||||||||||||||    
T  7451834 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatt 7451933  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  7451934 taaaatttcgtccctct 7451950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 43155924 - 43155808
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || | | |||| | ||||||||||||||||  | |||||| ||||||||||    
T  43155924 ggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatt 43155825  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  43155824 taaaatttcgtccctct 43155808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 44967466 - 44967350
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||| || | | |||| ||||||||||||||||||| | |||||||||||||||||    
T  44967466 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 44967367  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  44967366 taaaatttcgtccctct 44967350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 37248238 - 37248352
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| | ||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 37248337  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||| ||||    
T  37248338 aaatttcgtcgctct 37248352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 5368947 - 5369063
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||| || | | |||| ||||||||||||||||||| | |||||||||||||||||    
T  5368947 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 5369046  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  5369047 taaaattttgtccctct 5369063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 13058037 - 13058153
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | |||| ||||||||||| ||||||| | |||||||||||||||||    
T  13058037 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatt 13058136  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  13058137 taaaatttcgtccctct 13058153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 16005843 - 16005954
Alignment:
Q  205 aaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaa 304  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | | | |||| |||||| |||||||||||  | || |||||||||||||||||||    
T  16005843 aaatatgtatttgatccttataattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaa 16005942  T
Q  305 tttcgtccctct 316  Q
    ||||||||||||    
T  16005943 tttcgtccctct 16005954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 17356348 - 17356234
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||| |||||||||||||||||||||||| ||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattta 17356249  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  17356248 aaatttcgtccctct 17356234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 36009242 - 36009125
Alignment:
Q  200 ggcttaaatatgtattttatccttataattagggg-tcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| || | | |||| | ||||||||| ||||||| | ||||||||||||||||    
T  36009242 ggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcat 36009143  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  36009142 ttaaaatttcgtccctct 36009125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 14801736 - 14801852
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||| ||   | |||| |||||||||| |||||||| |||| ||||||||||||||    
T  14801736 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatt 14801835  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  14801836 taaaatttcgtccctct 14801852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 51692553 - 51692669
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||||  |  || |||| |||||||||| |||||||| ||||||||||||||||| |    
T  51692553 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcact 51692652  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  51692653 taaaatttcgtccctct 51692669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 54087121 - 54087007
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||| || | | |||| | ||||| || |||||||| |||||||||||||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcattta 54087022  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||| ||||    
T  54087021 aaatttcgtctctct 54087007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 55867542 - 55867428
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || ||| |||| | ||||||| ||||  ||| |||||||||||||||||||    
T  55867542 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatt 55867443  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  55867442 taaaatttcgtccct 55867428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 27069310 - 27069225
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27069310 aattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 27069225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 35028426 - 35028310
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||  |||||||||| || ||| |  | ||||||||| ||||||||| |||||||||||||||||||    
T  35028426 ggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcatt 35028327  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  35028326 taaaatttcgtcactct 35028310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 52909254 - 52909365
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||| ||  |||||||||||||| ||||||| ||   | |||| |||||||||| |||||||| ||||||||||||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  52909354 aaaatttcgtcc 52909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 10408289 - 10408203
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10408289 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 10408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 15508098 - 15507985
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||||||| ||||||||  |||||| |||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcattta 15508000  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||| ||||    
T  15507999 aaatttcgtctctct 15507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 35508668 - 35508558
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||| | | | |||| | |||| ||  |||||||| |||||||||||||||||||    
T  35508668 ggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatt 35508569  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  35508568 taaaatttcgt 35508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 52573254 - 52573340
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52573254 aattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaatttcgtcc 52573340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 54858960 - 54858874
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54858960 aattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 54858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 3032608 - 3032693
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3032608 aattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 3032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 22718346 - 22718254
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||| ||| ||||||||||| |   | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22718346 tccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 22986870 - 22986962
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||| ||| ||||||||||| |   | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22986870 tccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 208 - 316
Target Start/End: Complemental strand, 49879596 - 49879488
Alignment:
Q  208 tatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||||| ||||||  |||||||||||||||||||| |  |   | |||| |||||||||| |||||||| |||||||||||||||||||||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 49879497  T
Q  308 cgtccctct 316  Q
    |||||||||    
T  49879496 cgtccctct 49879488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 11448157 - 11448046
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||||||||  ||| | |||||||||||||||||||||||  |   | |||| ||||||||| |||| |||| |||||||||||||||||||    
T  11448157 ggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatt 11448058  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  11448057 taaaatttcgtc 11448046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 24411360 - 24411475
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| |||||   |||||||||| ||||||||||| || | | |||| ||||| |||| |||||||| |||||||||||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcattta 24411459  T
Q  302 aaatttcgtccctctt 317  Q
    ||  ||||||||||||    
T  24411460 aagattcgtccctctt 24411475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 27068948 - 27069022
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27068948 tttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 27069022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 27149380 - 27149310
Alignment:
Q  242 aaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27149380 aaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 27149310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 27934558 - 27934648
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  27934558 aattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 27934648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 54858586 - 54858672
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  54858586 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 54858672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 22566818 - 22566915
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||| ||||||||| ||||||||||||| |||| | |||||||||||||||||||||||  |||||| |  |||||||||||||||||| |||||||    
T  22566818 tccttgtaattagggatcgtttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctct 22566915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 45463099 - 45463184
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||   | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45463099 aattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 45463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 45463473 - 45463392
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  45463473 aattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaaaattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 10781912 - 10781796
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  10781912 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 10781813  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  10781812 taaaatttcgtccctct 10781796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 39539354 - 39539234
Alignment:
Q  192 atttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtt 291  Q
    ||||||| ||||||||||||||||| ||||||  ||||| |||||||||||||||| ||  || |||| | |||| || |||| |||  |||||||| ||    
T  39539354 atttgttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctt 39539255  T
Q  292 taatcatttaaaatttcgtcc 312  Q
    |||||||||||||||||||||    
T  39539254 taatcatttaaaatttcgtcc 39539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 53129934 - 53129818
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||||  | |   |||| ||||||||| ||||||||| || ||||||||| ||| ||    
T  53129934 ggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtt 53129835  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  53129834 taaaatttcgtccctct 53129818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 49879208 - 49879319
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||||||||||||| ||||  ||  |||||| |  ||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 49879307  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  49879308 aaaatttcgtcc 49879319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 9400890 - 9400800
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||||||| || | | |||||||||||||||||||||||  |||||| |  |||||||||||||||||| |||||||    
T  9400890 aattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctct 9400800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 10407915 - 10408001
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||| | | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10407915 aattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 10408001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 53701814 - 53701928
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||||||  |   | ||||  ||||||||| |||||||  |||||||||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcattta 53701913  T
Q  302 aaatttcgtccctct 316  Q
    ||||||| |||||||    
T  53701914 aaatttcttccctct 53701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 312
Target Start/End: Original strand, 22717958 - 22718051
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||||||  ||| ||||||||||||| ||| |||| |||||||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  22717958 tccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtcc 22718051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 22987258 - 22987165
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||||||  ||| ||||||||||||| ||| |||| |||||||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  22987258 tccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtcc 22987165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 50504232 - 50504139
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||| |||||||| ||| |||||||||||||   | |||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  50504232 tccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 50504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 22923157 - 22923249
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||  ||| |||||||||||||   | |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22923157 tccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22923249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 22927810 - 22927902
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||  ||| |||||||||||||   | |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22927810 tccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 22984089 - 22984181
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||  ||| |||||||||||||   | |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22984089 tccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 22997677 - 22997769
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||  ||| |||||||||||||   | |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22997677 tccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22997769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 24349674 - 24349790
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  24349674 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 24349773  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  24349774 taaaatttcgtccctct 24349790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 37976581 - 37976465
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| |   ||||||||||||||||||||||  | | | |||| |||||| ||| |||||||   ||||||||||||||||||    
T  37976581 ggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatt 37976482  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  37976481 taaaatttcgtcactct 37976465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 5818176 - 5818093
Alignment:
Q  225 taattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||||||| ||| ||||||||||||| | | |||| | |||||||| |||||||| ||||||||||||||||||||||||||||    
T  5818176 taattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaatttc 5818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 27891622 - 27891696
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  27891622 tttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 27891696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 52573628 - 52573542
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| ||||  |||||||| |||||||||  ||||||||||||||||||||||||| |||||    
T  52573628 aattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcatttaaaattccgtcc 52573542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 11523975 - 11524060
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||   | |||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  11523975 aattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaatttcgtc 11524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 37248630 - 37248521
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||| ||||  || ||||||| |  |||||||||| |    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttta 37248531  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  37248530 aatttcgtcc 37248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 50750913 - 50750998
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| |||||||||||||| || | | |||| |||||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  50750913 aattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 50750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 147317 - 147433
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| |||| || |||||||||||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  ||||| |    
T  147317 ttggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataa 147416  T
Q  298 tttaaaatttcgtccct 314  Q
    |||||||||| ||||||    
T  147417 tttaaaattttgtccct 147433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 148183 - 148071
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || | |||| | | ||||||| ||||  || ||||||| |  |||||||||    
T  148183 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatcatt 148084  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  148083 taaaatttcgtcc 148071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 1179228 - 1179120
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  1179228 ggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 1179129  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  1179128 taaaatttc 1179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 35028001 - 35028109
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| |||| | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  35028001 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 35028100  T
Q  303 aatttcgtc 311  Q
    |||||||||    
T  35028101 aatttcgtc 35028109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 39667183 - 39667091
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||| ||||| |||||||||| || | | |||| | ||||||||| || |||| |||||||||||||||||||||||||||||||    
T  39667183 tccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtc 39667091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 46661342 - 46661230
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || || |||||||| ||||  ||  |||||| |  |||||||||    
T  46661342 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcatt 46661243  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  46661242 taaaatttcgtcc 46661230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 50418668 - 50418780
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||| ||||  ||  |||||| |  |||||||||    
T  50418668 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatt 50418767  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  50418768 taaaatttcgtcc 50418780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 51692947 - 51692835
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  51692947 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 51692848  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  51692847 taaaatttcgtcc 51692835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 17355925 - 17356036
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||| |||  | || | ||||||| | ||||  || |||||||||  |||||||||    
T  17355925 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaatcatt 17356024  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  17356025 taaaatttcgtc 17356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 24711508 - 24711397
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| | || | ||||||| ||||  ||  |||||| |  |||||||||    
T  24711508 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcatt 24711409  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  24711408 taaaatttcgtc 24711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 4983097 - 4983007
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| ||||||||||||||  | | | |||||||||||||| ||||||||  |||||| |  ||||||||||||||||||||||||||    
T  4983097 aattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatttaaaatttcgtccctct 4983007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 32063764 - 32063650
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| |||||||||||| ||| |  ||||||||||| |||||||||| |||  | |||| | |||| ||||||| |||| ||||||  |||||||||||    
T  32063764 ggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatt 32063665  T
Q  300 taaaatttcgtccct 314  Q
    ||||||| |||||||    
T  32063664 taaaattccgtccct 32063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 33247644 - 33247554
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||| ||||||||||||  || | | |||||||||||||||||||||||  |||||| |  |||||||||||||||||| |||||||    
T  33247644 aattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctct 33247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 51859794 - 51859720
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||   | |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  51859794 tttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcatttaaaatttcgtcc 51859720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 53129506 - 53129616
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||||| | | |||| || |||||||||||  |||  || ||||||| |  |||||||||    
T  53129506 ggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggtcatgtatttgctaatccttacaaactagtcttgcaatcattaatcatt 53129605  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  53129606 taaaatttcgt 53129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 5369297 - 5369248
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  5369297 ttggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaatt 5369248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 16605628 - 16605717
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctc 315  Q
    ||||||| ||| ||||||||||||| | | |||| |  || |||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  16605628 aattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaaaatttcgtccctc 16605717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 39701309 - 39701224
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||  || |||| | ||||| || ||||||||  ||||||||||||||||||||||||||||||    
T  39701309 aattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaaaatttcgtc 39701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 8438307 - 8438394
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||||||| |||||||||| || ||| |||| | |||||||||||| |||||||||||    ||||||||||||||||||||||||    
T  8438307 aattaggggtcatttaaaaattggt-catgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttcgtccct 8438394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 10780713 - 10780821
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||  | | ||||||||| ||||  ||  |||||| |  |||||||||    
T  10780713 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatt 10780812  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  10780813 taaaatttc 10780821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 10974322 - 10974430
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||  | | ||||||||| ||||  ||  |||||| |  |||||||||    
T  10974322 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatt 10974421  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  10974422 taaaatttc 10974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 11446296 - 11446384
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||| |||| |||||||||| ||||||  ||| | |||||||||||| |||| ||||||  |||||||| |||||||||||||||||    
T  11446296 aattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttcgtccct 11446384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 23613707 - 23613599
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||  | | | || | ||||||||| |||| ||| ||||||| |   |||||||    
T  23613707 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcat 23613608  T
Q  299 ttaaaattt 307  Q
    |||||||||    
T  23613607 ttaaaattt 23613599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 34765380 - 34765492
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||  || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  34765380 ggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 34765479  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  34765480 taaaatttcgtcc 34765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 50751899 - 50751812
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||| |||||||||||||| || | | |||| |||||||||| ||| |||  |||||||||||||||||||||||| |||||||||    
T  50751899 aattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtccct 50751812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 51859471 - 51859519
Alignment:
Q  264 aatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  51859471 aatcctggcaatttacccttgcattatttaatcatttaaaatttcgtcc 51859519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 7452234 - 7452119
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | ||||||||| ||||  ||  |||||| |  ||||||    
T  7452234 tttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatc 7452135  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||| ||||    
T  7452134 atttaaaatttagtcc 7452119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 9731595 - 9731528
Alignment:
Q  243 aaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||||||||| | |||| |||||||||| |||||||  |||| |||||||||||||||||||||||||    
T  9731595 aaattagttcctgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgt 9731528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 308
Target Start/End: Complemental strand, 18831748 - 18831637
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||| | ||||  ||  |||||| |  ||||||    
T  18831748 tttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatc 18831649  T
Q  297 atttaaaatttc 308  Q
    ||||||||||||    
T  18831648 atttaaaatttc 18831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 9400545 - 9400631
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  9400545 aattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 9400631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 50503863 - 50503937
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||| ||| ||| |||| | ||||| | ||||||||| |||||||||||||||||||||||||| |||||    
T  50503863 tttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcatttaaaattccgtcc 50503937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 37976156 - 37976265
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| | |||| | || | ||||||| | ||||  || ||||||| |  ||||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcattaatcatttaa 37976255  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  37976256 aatttcgtcc 37976265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 1178057 - 1178132
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatt 276  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||| | |||| || | ||||||||| ||||||    
T  1178057 ggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaatt-ggtcatgtattcgctaatccttgcaatt 1178132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 13058410 - 13058298
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||| |||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  13058410 ggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 13058311  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  13058310 taaaatttagtcc 13058298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 24350860 - 24350748
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | |  | | ||||||||| ||||  ||   ||||| |  |||||||||    
T  24350860 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcatt 24350761  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  24350760 taaaatttcgtcc 24350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 36008844 - 36008956
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||| || | | || | ||||||| | ||||  ||  |||||| |  |||||||||    
T  36008844 ggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatcatt 36008943  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  36008944 taaaatttagtcc 36008956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 48528485 - 48528532
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  48528485 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaatt 48528532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 4982764 - 4982838
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||| || ||| |||||||||||| ||||||||||  |||||| |  ||||||||||||||||| ||||    
T  4982764 tttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatcatttaaaatttggtcc 4982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 14802165 - 14802051
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||| ||||| ||||||  |||||| | ||||||||||||| || | | || | |||||| || ||||  || ||||||| |  |||||||    
T  14802165 ttggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatca 14802066  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  14802065 tttaaaatttcgtcc 14802051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 42738390 - 42738312
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  42738390 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 42738312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 54086692 - 54086742
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||||||||    
T  54086692 tttggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 54086742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 33247300 - 33247377
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaa 303  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  |||||||||||||    
T  33247300 aattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 44967071 - 44967116
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaatt 44967116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 9145107 - 9145047
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  9145107 taattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 9145047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 11108265 - 11108161
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||| |||||||||||||  | | | || | ||||||||| ||||  || ||||||| |  ||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaa 11108166  T
Q  303 aattt 307  Q
    |||||    
T  11108165 aattt 11108161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 43155532 - 43155636
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaa 43155631  T
Q  303 aattt 307  Q
    |||||    
T  43155632 aattt 43155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 15507674 - 15507785
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  || || |||| |  ||| ||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcattattcattt 15507773  T
Q  301 aaaatttcgtcc 312  Q
     |||||||||||    
T  15507774 caaatttcgtcc 15507785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 24411776 - 24411729
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  24411776 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatt 24411729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 30642511 - 30642460
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||| |||| ||| |||||||  ||||||||||||||||||||||||||    
T  30642511 taatcctagcaaattagtcttgcaaagtttaatcatttaaaatttcgtccct 30642460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 55866095 - 55866158
Alignment:
Q  184 atatataaatttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||| || | ||||||||||||||||||||  ||| |  ||||||||||||||||||||||    
T  55866095 atatatatatatttttggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaatt 55866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 16006224 - 16006174
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||| ||||||||||||||| || |||  ||||||||||||||||||||||    
T  16006224 tttgacttaaatatgtatttgattcttgcaattaggggtcgtttaaaaatt 16006174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 39538160 - 39538194
Alignment:
Q  280 tcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||||| |||||||||||||||||||||||||    
T  39538160 tcttgcattctttaatcatttaaaatttcgtccct 39538194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 312
Target Start/End: Original strand, 39666858 - 39666888
Alignment:
Q  282 ttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||||||||||||||||||||    
T  39666858 ttgcattgtttaatcatttaaaatttcgtcc 39666888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 39700947 - 39701017
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||||| | ||| |||| |||||||||| |||| ||| ||| |||| |||||| ||||||||||||    
T  39700947 tttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaattatttaaaatttc 39701017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 32950198 - 32950258
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||| ||||    
T  32950198 taattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtctctct 32950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 34837415 - 34837355
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  34837415 taattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 34837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 52909681 - 52909569
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| || || |||||||||| ||  || || | ||||||||| ||||  ||  |||||| |  ||||| |||    
T  52909681 ggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaattatt 52909582  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  52909581 taaaatttcgtcc 52909569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 6367560 - 6367678
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||    
T  6367560 ttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 6367659  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  6367660 tttaaaatttcgtccctct 6367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 17662278 - 17662161
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||| ||||||||||||||||| |||| |||||| | ||||||||||||||||| |||||||||||||||||||    
T  17662278 ggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatt 17662179  T
Q  300 taaaatttcgtccctctt 317  Q
    ||||||||||||||||||    
T  17662178 taaaatttcgtccctctt 17662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 14878980 - 14879087
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||||||||||||||  |||||||||||||||||||||| |||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T
Q  309 gtccctct 316  Q
    ||||||||    
T  14879080 gtccctct 14879087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 40772506 - 40772623
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||| || | | |||| |||||||||| |||||||||||||||||||||||||||    
T  40772506 tggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcat 40772605  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  40772606 ttaaaatttcgtccctct 40772623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 34464446 - 34464560
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| |||| ||||||| ||||||||||| |||||| |||||||||    
T  34464446 tttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatc 34464545  T
Q  297 atttaaaatttcgtc 311  Q
    |||||||||||||||    
T  34464546 atttaaaatttcgtc 34464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 46163033 - 46163146
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| || ||| |||| |||||||||| |||||||| ||||||||||||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 46163132  T
Q  303 aatttcgtccctct 316  Q
    ||||||||| ||||    
T  46163133 aatttcgtctctct 46163146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 23209755 - 23209639
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| ||||||||||| |||||||    
T  23209755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcatt 23209656  T
Q  300 taaaatttcgtccctct 316  Q
    || ||||||||||||||    
T  23209655 tacaatttcgtccctct 23209639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 13914494 - 13914379
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||| ||| ||||||||||| || ||| |||| ||||||||||||||||||| |||| |||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  13914394 aaaatttcgtccctct 13914379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 19018062 - 19017940
Alignment:
Q  195 tgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaa 294  Q
    |||| ||||||||||||||||||||||||  |||||  ||||||||||||||| || ||| || | ||||||||||||||||||| |||||||| |||||    
T  19018062 tgttaggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaa 19017963  T
Q  295 tcatttaaaatttcgtccctctt 317  Q
    ||||||||||||| |||||||||    
T  19017962 tcatttaaaattttgtccctctt 19017940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 25647884 - 25648000
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||||||||||||| | |||||| ||||||||||    
T  25647884 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatt 25647983  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  25647984 taaaatttcgtccctct 25648000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 26024423 - 26024539
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| || |||  |||||||||||||||||||||| ||   | |||| ||||||||||||||||||| |||||||||||||||||||    
T  26024423 ggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 26024522  T
Q  300 taaaatttcgtccctct 316  Q
    ||||| |||||||||||    
T  26024523 taaaagttcgtccctct 26024539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 34464877 - 34464761
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||| ||||||||||| || ||| |||| ||||||| ||||||||||| |||||| ||||||||||||    
T  34464877 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464778  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  34464777 taaaattttgtccctct 34464761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 47999520 - 47999404
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| || | | |||| ||||||| ||||||||||| | |||||| ||||||||||    
T  47999520 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatt 47999421  T
Q  300 taaaatttcgtccctct 316  Q
    |||||| ||||||||||    
T  47999420 taaaatatcgtccctct 47999404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 183620 - 183503
Alignment:
Q  200 ggcttaaatatgtattttatccttataattagggg-tcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| || | | |||| ||||||||| ||||||||| | |||||| |||||||||    
T  183620 ggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcat 183521  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  183520 ttaaaatttcgtccctct 183503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 7820954 - 7821066
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||| ||||||| | | |||| |||||||||  |||||||| |||||||||||||||||||    
T  7820954 ggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcatt 7821053  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  7821054 taaaatttcgtcc 7821066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 37578620 - 37578504
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||| ||||||||||||||||| |||  | |||| ||||||||||||||||||| ||| ||||| |||||||||    
T  37578620 ggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatt 37578521  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  37578520 taaaatttcgtcactct 37578504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 17691219 - 17691334
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| |||||||||||  |||||| || ||||||||||||||||||| || | | |||| ||||||||| |||| ||| ||||||||||||||||||||    
T  17691219 ggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 17691318  T
Q  300 taaaatttcgtccctc 315  Q
    ||||||||||||||||    
T  17691319 taaaatttcgtccctc 17691334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 5734010 - 5734123
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||| || ||| |||| ||||||||| |||| ||| ||||||||||||||||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatt 5734108  T
Q  300 taaaatttcgtccct 314  Q
    |||||||| ||||||    
T  5734109 taaaattttgtccct 5734123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 24009966 - 24009853
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    |||||| ||||||| ||||||  |||||||| ||||||||||||| || |||| |||| || |||||||||||||||| |||||||||||||||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggt-cattgtaatcgccaatcctggcaatttacccttgcattgtttaatcattta 24009868  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  24009867 aaatttcgtccctct 24009853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 40210796 - 40210682
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||| ||  ||||||||| |||||||||||| ||   | |||| |||||| |||||||||||| |||||||||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 40210697  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  40210696 aaatttcgtccctct 40210682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 42248475 - 42248589
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||| ||||||||||||||| ||   | || | ||||||| ||||||||||| |||||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattta 42248574  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  42248575 aaatttcgtccctct 42248589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 4960541 - 4960657
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaatt-gctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| | || ||  ||| ||||||||| ||||||||| |||||||||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaatt-gctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatt 4960639  T
Q  300 taaaatttcgtccctctt 317  Q
    ||||||||||||||||||    
T  4960640 taaaatttcgtccctctt 4960657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 41098733 - 41098846
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| || |||  |||||||||||||||||||||| ||   | |||| |||||||||| |||||||| |||||||||||||||||||    
T  41098733 ggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 41098832  T
Q  300 taaaatttcgtccc 313  Q
    |||||||| |||||    
T  41098833 taaaattttgtccc 41098846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 19515819 - 19515935
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | |||| | |||| |||| ||||||| ||||||||||||||| |||    
T  19515819 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattatt 19515918  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  19515919 taaaatttcgtccctct 19515935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 30711326 - 30711442
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  |||||||||| |||||||||||  |   | |||| ||||||||| ||||||||  ||||||||||||||||||    
T  30711326 tggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcat 30711425  T
Q  299 ttaaaatttcgtccctc 315  Q
    |||||||||||||||||    
T  30711426 ttaaaatttcgtccctc 30711442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 35152343 - 35152459
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||| || | | |||| |||||| ||| |||||||| ||| |||||||||||||||    
T  35152343 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatt 35152442  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  35152443 taaaattttgtccctct 35152459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 36694676 - 36694560
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| || ||||||||||| ||   | |||| |||||||||| |||||||| |||||||||||||||||||    
T  36694676 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36694577  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  36694576 taaaatttcgtctctct 36694560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 36710777 - 36710661
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| || ||||||||||| ||   | |||| |||||||||| |||||||| |||||||||||||||||||    
T  36710777 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36710678  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  36710677 taaaatttcgtctctct 36710661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 1103463 - 1103577
Alignment:
Q  204 taaatatgtattttatccttataattaggggtcgtttaaaaat--tagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||| ||| ||  |||||| ||||||||||||||  | || | | |||| ||||||||||||||||||| |||||||||||||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 1103562  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  1103563 aaatttcgtccctct 1103577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 40714843 - 40714757
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40714843 aattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtcc 40714757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 12906047 - 12905974
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12906047 tttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 12905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 20760912 - 20760819
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||||||| ||| |||||||||||||   | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20760912 tccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 20760819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 35041021 - 35040928
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||| |||||||  ||| ||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35041021 tccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 35040928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 13914068 - 13914180
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||| ||||||| ||||||  ||||||||||||||||||||||||| ||| || | ||||||||| |||| ||| ||||||| |  |||||||||    
T  13914068 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatt 13914167  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  13914168 taaaatttcgtcc 13914180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 34849008 - 34849127
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | || | ||||||||| |||| |||| ||||||   |||||||    
T  34849008 tttggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatc 34849107  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  34849108 atttaaaatttcgtccctct 34849127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 17188980 - 17189065
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  17188980 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 28011390 - 28011479
Alignment:
Q  227 attaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  28011390 attaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 28011479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 28324831 - 28324915
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||||||||||| ||||||||| |||| |||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  28324831 aattaggcgtcgtttaaaa-ttagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtc 28324915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 34850494 - 34850377
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| |||| |||| ||||||   |||||||||    
T  34850494 tggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcat 34850395  T
Q  299 ttaaaatttcgtccctct 316  Q
    |||||||||| |||||||    
T  34850394 ttaaaatttcatccctct 34850377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 40714470 - 40714555
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40714470 aattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 40714555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 26024820 - 26024708
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||| ||||  || ||||||| |  |||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatt 26024721  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  26024720 taaaatttcgtcc 26024708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 48779547 - 48779435
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| |||| |||||||||||| ||| || ||||||||||| ||||  || ||||||| |  |||||||||    
T  48779547 ggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcatt 48779448  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  48779447 taaaatttcgtcc 48779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 17692610 - 17692500
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||  || | | | || ||||||||| |||| |||   |||||||||||||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaa 17692511  T
Q  303 aatttcgtccc 313  Q
    |||||||||||    
T  17692510 aatttcgtccc 17692500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 32917286 - 32917376
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||  ||||||||||||| || | | |||| |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  32917286 aattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttcgtctctct 32917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 43758872 - 43758938
Alignment:
Q  250 ttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43758872 ttcatgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctct 43758938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 45750242 - 45750160
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| |||||||||||||   | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45750242 aattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcatttaaaatttc 45750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 49955385 - 49955459
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  49955385 tttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcc 49955459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 49955747 - 49955661
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||||||   | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49955747 aattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 49955661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 32558533 - 32558421
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||  |||| |||| |||||| ||||||  ||| ||||||||||||||| | |||| ||||||||||  ||||||| |||| | ||||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcatt 32558434  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  32558433 taaaatttcgtcc 32558421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 45749842 - 45749954
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||  |||| ||| ||||||  ||||||| ||| |||||||||||||   | |||| | |||||||| |||||||| |||||||||||||||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatcatt 45749941  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  45749942 taaaatttcgtcc 45749954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 8898543 - 8898629
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||||||   | |||| |||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  8898543 aattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatttaaaatttcgtcc 8898629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 17189239 - 17189173
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaa 304  Q
    ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  17189239 tttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 19322892 - 19322966
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| || | ||||||||| ||||    
T  19322892 ggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaa 19322966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 31050988 - 31051062
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||   | |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31050988 tttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtcc 31051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 183220 - 183333
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||||    
T  183220 tggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 183319  T
Q  299 ttaaaatttcgtcc 312  Q
    ||||||||| ||||    
T  183320 ttaaaatttagtcc 183333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 28325203 - 28325119
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| ||| |||| | ||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  28325203 aattaggcgtcatttaaaaattagt-catgtaatcgttaattatggcaatttacccttgcattgtttaatcatttaaaatttcgtc 28325119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 36694282 - 36694391
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||  || || | ||||||||| ||||  || ||||||| |  |||||||||    
T  36694282 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 36694381  T
Q  300 taaaatttcg 309  Q
    ||||||||||    
T  36694382 taaaatttcg 36694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 36710383 - 36710492
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||  || || | ||||||||| ||||  || ||||||| |  |||||||||    
T  36710383 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 36710482  T
Q  300 taaaatttcg 309  Q
    ||||||||||    
T  36710483 taaaatttcg 36710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 8898924 - 8898832
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||| ||| |||||||||||||   | ||||  ||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  8898924 tccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatcatttaaaatttcgtc 8898832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 31058445 - 31058373
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||||||||||||  || |||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  31058445 tttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcatttaaaatttcgt 31058373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 30326522 - 30326605
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcg 309  Q
    ||||||| ||| |||||||||||||   | |||| |||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  30326522 aattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatttaaaatttcg 30326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 44523508 - 44523449
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctc 315  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  44523508 taatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaatttcatccctc 44523449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 35473631 - 35473705
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||    
T  35473631 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 37929444 - 37929530
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | | || |||||||||| |||||||| ||| |||| |||||||||||||||||||||||    
T  37929444 aattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcatttaaaatttcgtcc 37929530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 1841515 - 1841575
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||    
T  1841515 taatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttcgtcactct 1841575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 6367990 - 6367878
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  6367990 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 6367891  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  6367890 taaaatttcgtcc 6367878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 43759250 - 43759138
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||  || | | || | ||||||||| ||||  ||  |||||| | || |||||||    
T  43759250 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatcatt 43759151  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  43759150 taaaatttcgtcc 43759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 46899059 - 46899175
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||||||| || ||| || | |||||| || ||||  ||   ||||| |  |||||||    
T  46899059 ttggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatca 46899158  T
Q  298 tttaaaatttcgtccct 314  Q
    |||||||||||||||||    
T  46899159 tttaaaatttcgtccct 46899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 7231677 - 7231630
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7231677 ggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaatt 7231630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 30711755 - 30711644
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  30711755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 30711656  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  30711655 taaaatttcgtc 30711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 47999120 - 47999235
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||| ||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||    
T  47999120 tttggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 47999219  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||| ||||    
T  47999220 atttaaaatttagtcc 47999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 5735139 - 5735025
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||  ||||||||||||| |||||| || | ||||||||| ||||  ||  ||| || |  |||||||||    
T  5735139 ggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcatt 5735040  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  5735039 taaaatttcgtccct 5735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 7371316 - 7371402
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||  | |||| ||| || |||| ||||||  ||||||||||||||| ||||||||||||||||    
T  7371316 aattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattatttaaaatttcgtcc 7371402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 24009572 - 24009622
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  24009572 tttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 24009622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 24905537 - 24905448
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||| || ||||||||||||| || | | |||||||||||||||||||||||  | |||| |  ||||||||||||||||||||||||||    
T  24905537 aattatggatcgtttaaaaattcgtcc-tgtaattgctaatcctggcaatttagccctgcaattgttaatcatttaaaatttcgtccctct 24905448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 28011739 - 28011653
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  28011739 aattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 28011653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 35038481 - 35038567
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||| ||||| ||||||||||  | ||| |||| | ||||||| |||| ||||| ||| |||||||||||||||||||||||||||    
T  35038481 aattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaaaatttcgtcc 35038567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 35152757 - 35152708
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagt 250  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagt 35152708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 1103889 - 1103777
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||| ||||| ||||||  |||||  ||||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  |||||||||    
T  1103889 ggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 1103790  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  1103789 taaaatttcgtcc 1103777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 17661852 - 17661963
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| | || | || | ||||||||| ||||  ||   ||||| |  |||||||||    
T  17661852 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-ggtcctgtattcgctaatccttgcaaactagcattgcaatcattaatcatt 17661950  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  17661951 taaaatttcgtcc 17661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 31514694 - 31514598
Alignment:
Q  220 ccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||| ||||||| | | |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  31514694 ccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattattaatcatttaaaatttcgtccctct 31514598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 32132330 - 32132418
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||| |||| |||||||||| || ||| |||| | ||||||| |||| |||||||| ||  ||||||||| ||||||||||||||||    
T  32132330 aattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttcgtccct 32132418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 42533027 - 42533099
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaat 275  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||| ||| || | | ||||||| |||||    
T  42533027 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaat 42533099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 310
Target Start/End: Original strand, 37578195 - 37578302
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  ||| || |  ||||||||||||    
T  37578195 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcatttaa 37578294  T
Q  303 aatttcgt 310  Q
    ||||||||    
T  37578295 aatttcgt 37578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 19017629 - 19017739
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||| |||||||||||  ||  | || | |||||||||  |||  || ||||||| |  |||||||||    
T  19017629 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatcattaatcatt 19017728  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  19017729 taaaatttcgt 19017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 24905193 - 24905279
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | |||||||||||||| ||||||||  |||||| |  ||||||||||||||||| ||||    
T  24905193 aattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtcc 24905279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 33442953 - 33442875
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  33442953 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 33442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 1841883 - 1841775
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||  | | | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  1841883 ttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaacta-gcttgcaatcattaatcatttaa 1841785  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  1841784 aatttcgtcc 1841775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 48779182 - 48779223
Alignment:
Q  265 atcctggcaatttactcttgcattgtttaatcatttaaaatt 306  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  48779182 atcctgtcaatttactgttgcattgtttaatcatttaaaatt 48779223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 49723147 - 49723046
Alignment:
Q  207 atatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatt 306  Q
    |||||||||| ||||||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||  ||| || |  ||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  307 tc 308  Q
    ||    
T  49723047 tc 49723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 6518224 - 6518176
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatta 248  Q
    ||||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatta 6518176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 40435348 - 40435392
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 40435392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 19323317 - 19323246
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    |||||||||||||| || ||| |||||| || ||||||||||||| |||||| || | ||||||||| ||||    
T  19323317 ttaaatatgtatttcattcttgtaattatggatcgtttaaaaattcgttcatgtattcgctaatccttgcaa 19323246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 31197057 - 31197112
Alignment:
Q  192 atttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||| |||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  31197057 atttttttggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatt 31197112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 41099157 - 41099114
Alignment:
Q  204 taaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaatt 41099114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 40772887 - 40772841
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaat 246  Q
    ||||||||||||||||| ||||||  ||||||||||||||| |||||    
T  40772887 ggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaat 40772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 48692441 - 48692395
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||| ||| || ||||||| |||||||||||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaatt 48692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 10303986 - 10304039
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||||||||||| | ||| ||   |||||||||||||||||||||||||||    
T  10303986 taatcctggcaatttgcccttccaaaatttaatcatttaaaatttcgtccctct 10304039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 32917689 - 32917641
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||| || |||  ||||| ||||||||||||||||    
T  32917689 tggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaatt 32917641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 6150454 - 6150570
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| ||||  ||||||||| ||||||| ||||||||||||||||||||    
T  6150454 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcatt 6150553  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  6150554 taaaatttcgtccctct 6150570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 13962864 - 13962980
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||| || | | |||||||||||||||| ||||||| |||||||||||||||||||    
T  13962864 ggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatt 13962963  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  13962964 taaaatttcgtccctct 13962980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 24547553 - 24547437
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||    
T  24547553 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcatt 24547454  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  24547453 taaaatttcgtccctct 24547437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 28771268 - 28771150
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||| | || ||||||||||||    
T  28771268 ttggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatca 28771169  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  28771168 tttaaaatttcgtccctct 28771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 5993889 - 5994005
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||| |||||||||||| |||||||||||||||||||    
T  5993889 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 5993988  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  5993989 taaaatttcgtccctct 5994005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 3529277 - 3529154
Alignment:
Q  193 tttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgttt 292  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||||||||||||| | | ||||||||    
T  3529277 tttgtttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgttt 3529178  T
Q  293 aatcatttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||||||    
T  3529177 aatcatttaaaatttcgtccctct 3529154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 27587145 - 27587264
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | ||||| ||||||||    
T  27587145 tttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatc 27587244  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  27587245 atttaaaatttcgtccctct 27587264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 39453302 - 39453416
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||| ||   | |||| ||||||||||||||||||| |||||||||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 39453401  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  39453402 aaatttcgtccctct 39453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 32242245 - 32242358
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||  | | | |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  32242245 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaa 32242344  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  32242345 aatttcgtccctct 32242358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 35512151 - 35512264
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||| |||||||||||||||| || | | |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35512151 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 35512250  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  35512251 aatttcgtccctct 35512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 11761749 - 11761861
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | |||||||||||||||||    
T  11761749 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 11761848  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  11761849 taaaatttcgtcc 11761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 14194850 - 14194735
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||||||| |  ||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  14194850 ggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggc-catgtaattactaatcctggcaatttacccttgcattgtttaatcatt 14194752  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  14194751 taaaatttcgtccctct 14194735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 38475427 - 38475311
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||| |||| ||||||  |||||||||||||||||||||| || ||| |||| | |||||||| |||||||| |||||||||||||||||||    
T  38475427 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatt 38475328  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  38475327 taaaatttcgtccctct 38475311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 16082979 - 16083093
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||||| |||||||||||||| | | |||| | ||||||||||||||||| |||||||||||||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 16083078  T
Q  302 aaatttcgtccctct 316  Q
    ||||||||| |||||    
T  16083079 aaatttcgtacctct 16083093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 16157283 - 16157167
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | |||||||| |||||||| |||||||||||||||||||    
T  16157283 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatt 16157184  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  16157183 taaaattttgtccctct 16157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 20814563 - 20814447
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | |||| ||||||||| ||||||||| |||||||||||||||||||    
T  20814563 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatt 20814464  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  20814463 taaaattttgtccctct 20814447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 21265570 - 21265452
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa-tttactcttgcattgtttaatcat 298  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||| |||| | |||| ||||||| |||||| ||||| ||||||||||||||| ||    
T  21265570 ggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattat 21265471  T
Q  299 ttaaaatttcgtccctctt 317  Q
    ||||||||||||| |||||    
T  21265470 ttaaaatttcgtctctctt 21265452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 18247087 - 18247200
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || ||| |||| ||||||  ||||||||||| |||||||| |||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcattt 18247184  T
Q  301 aaaatttcgtccctct 316  Q
    | ||||||||||||||    
T  18247185 agaatttcgtccctct 18247200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 20840533 - 20840649
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||| ||||||||| ||||||||||||||| |||    
T  20840533 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgatt 20840632  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  20840633 taaaattttgtccctct 20840649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 5024443 - 5024330
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || |||| |||| |||||||||| ||||||||  ||||||||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt-cattgtaatcgctaatcctgacaatttaccattgcattgtttaatcattta 5024345  T
Q  302 aaatttcgtccctct 316  Q
    ||||||||| |||||    
T  5024344 aaatttcgttcctct 5024330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 35920614 - 35920496
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||| |   |||||||||||||||||||||| || | | |||| |||||||||| |||||||  ||| |||||||||||||    
T  35920614 ttggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatca 35920515  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  35920514 tttaaaatttcgtccctct 35920496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 13362653 - 13362540
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||| ||  |||||||||||||||||||||| || | | |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaa 13362554  T
Q  303 aatttcgtccctct 316  Q
    ||||| ||| ||||    
T  13362553 aatttagtctctct 13362540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 17202399 - 17202512
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||| ||||| ||||||  |||||||||||||||||||||| ||   | |||| |||||||||| |||||||| |||||||||||||| ||||    
T  17202399 ggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatt 17202498  T
Q  300 taaaatttcgtccc 313  Q
    ||||||||||||||    
T  17202499 taaaatttcgtccc 17202512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 316
Target Start/End: Complemental strand, 29646777 - 29646674
Alignment:
Q  212 tattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||| |||||||| ||||||||||| || || ||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  29646777 tatttcatccttgtaattaggagtcgtttaaaa-ttggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 29646679  T
Q  312 cctct 316  Q
    |||||    
T  29646678 cctct 29646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 18670202 - 18670311
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  || ||||||||||||||||||| || | | |||| |||||||   ||||||||| |||||||||||||||||||    
T  18670202 ggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcatt 18670298  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  18670299 taaaatttcgtcc 18670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 38442075 - 38442184
Alignment:
Q  207 atatgtattttatccttataattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaat 305  Q
    |||||||||| ||| ||  ||||||||||  |||||||||| || |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggt-cattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaat 38442173  T
Q  306 ttcgtccctct 316  Q
    |||||||||||    
T  38442174 ttcgtccctct 38442184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 33871336 - 33871451
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||  |||| |||| |||||  ||||| | ||| ||||||||||||| | | |||| |||||| |||||||||||| ||||||||||||||||    
T  33871336 tttggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatc 33871435  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||||||||    
T  33871436 atttaaaatttcgtcc 33871451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 17544448 - 17544362
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||| | |||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  17544448 aattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcc 17544362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 17544086 - 17544155
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17544086 tttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattt 17544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 19892734 - 19892625
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||| ||||||||||||||| ||   | |||| | |||||||  |||||||| |||||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattta 19892635  T
Q  302 aaatttcgtc 311  Q
    ||||||||||    
T  19892634 aaatttcgtc 19892625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 30005179 - 30005260
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  30005179 aattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttacatttgcattatttaatcatttaaaattt 30005260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 186420 - 186534
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||| ||||| ||| | | ||||||||||||||||||||||||| |||| |||| | |||| |||| ||||||  ||||||||||||||||||    
T  186420 ggcttaaatatttatttcatcttga-aattaggggtcgtttaaaaattagt-cattgtaatcgttaattctggaaatttaaccttgcattgtttaatcat 186517  T
Q  299 ttaaaatttcgtccctc 315  Q
    |||||||||||||||||    
T  186518 ttaaaatttcgtccctc 186534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 21288085 - 21287975
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    |||||||||  |||| |||| ||||| |||||||  ||||||||||||||| | ||| |||| ||||||| |||||||  || |||||||||||||||||    
T  21288085 ttggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatca 21287986  T
Q  298 tttaaaatttc 308  Q
    |||||||||||    
T  21287985 tttaaaatttc 21287975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 41930542 - 41930632
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||| ||||||||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  41930542 aattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 41930632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 8875487 - 8875559
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||||||||| | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8875487 tttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgt 8875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 14194423 - 14194535
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  |||||||||    
T  14194423 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 14194522  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  14194523 taaaatttcgtcc 14194535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 28269807 - 28269700
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||||         |||||||||||| |  |||||||| |||||||||||||||||||    
T  28269807 ggcttaaatatgtatttcatc-ttgcaattaggggtcgtttaaaaatg--------taattgctaatcataacaatttacccttgcattgtttaatcatt 28269717  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  28269716 taaaatttcgtccctct 28269700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 11047438 - 11047553
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtc-gtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||||||||| | ||||  ||||||| ||| |||||||||||   ||   |||| ||||||| ||||||||||| ||||||||||||||||||    
T  11047438 ggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg--tcccgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 11047535  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||| ||||    
T  11047536 ttaaaatttcgtctctct 11047553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 16083371 - 16083261
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| || ||||||||||||| |||||| || | ||||||||| ||||  || ||||||| |  |||||||||    
T  16083371 ggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatcatt 16083272  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  16083271 taaaatttcgt 16083261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 17202830 - 17202716
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||  || | | || | ||||||||| ||||  || ||||||| |  ||||||    
T  17202830 tttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatc 17202731  T
Q  297 atttaaaatttcgtc 311  Q
    |||||||||||||||    
T  17202730 atttaaaatttcgtc 17202716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 20152819 - 20152893
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||   | |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20152819 tttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatttaaaatttcgtcc 20152893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 22298568 - 22298650
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| ||||||||||||| ||| |||| |||||||  |||||||||| ||| ||||||||||||||||||||||||    
T  22298568 aattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttc 22298650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 11740690 - 11740799
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||  | ||| || | ||||||||| ||||  ||  |||||||| |||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaa 11740789  T
Q  303 aatttcgtcc 312  Q
    ||||| ||||    
T  11740790 aattttgtcc 11740799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 20840865 - 20840760
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||   | |||| ||||||||| ||||  || ||||||| |  |||||||||    
T  20840865 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcattaatcatt 20840766  T
Q  300 taaaat 305  Q
    ||||||    
T  20840765 taaaat 20840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 3528873 - 3528985
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || ||||||||||| ||||  ||  |||||| |  |||||||||    
T  3528873 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcatt 3528972  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  3528973 taaaatttagtcc 3528985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 6150848 - 6150736
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||| || | | ||||| | ||||  ||  |||||| |  |||||||||    
T  6150848 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatt 6150749  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  6150748 taaaatttcgtcc 6150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 33871701 - 33871653
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33871701 taatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 33871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 29646362 - 29646469
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| || ||| || | ||||||||| ||||  ||  ||| || |  |||||||||    
T  29646362 ggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcatt 29646461  T
Q  300 taaaattt 307  Q
    ||||||||    
T  29646462 taaaattt 29646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 35920229 - 35920340
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||| || ||||||||| ||||||||||||| ||  || || | ||||||||| |||| |||  |||||| |  ||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcattt 35920328  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  35920329 aaaatttcgtcc 35920340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 6758236 - 6758146
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || | | |||||| |||| |||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  6758236 aattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatcatttaaaatttcgtccctct 6758146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 8322466 - 8322520
Alignment:
Q  262 ctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8322466 ctaatcttggcaatttatccttgcattgtttaatcatttaaaatttcgtccctct 8322520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 24205018 - 24204937
Alignment:
Q  207 atatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattg 289  Q
    |||||||||||||| ||  |||||||||||||||||||||| | |||| |||| |||||||||| |||||||| |||||||||    
T  24205018 atatgtattttatctttgcaattaggggtcgtttaaaaatt-gatcatgtaatcgctaatcctgacaatttacccttgcattg 24204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 27587545 - 27587431
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||    
T  27587545 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatca 27587446  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||| ||||    
T  27587445 tttaaaatttagtcc 27587431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 186848 - 186735
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  |||||| ||||||||||||||| || | | || ||||||||| | ||||  ||  |||||| |  ||||||||    
T  186848 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcat 186749  T
Q  299 ttaaaatttcgtcc 312  Q
    ||||||||||||||    
T  186748 ttaaaatttcgtcc 186735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 11762145 - 11762033
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  11762145 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 11762046  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  11762045 taaaatttagtcc 11762033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 20153315 - 20153236
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||   ||||||||| ||||||||||||||||||||||||||||    
T  20153315 aattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatcatttaaaatttc 20153236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 20814136 - 20814247
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| | || | || | ||||||||| ||||  || | ||||| |  |||||||||    
T  20814136 ggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaatt-ggtcttgtattcgctaatccttgcaaactagtattgcaatcattaatcatt 20814234  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  20814235 taaaatttcgtcc 20814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 5835623 - 5835730
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||  || ||||||||| ||||||||||||| |||| | || | | ||||| | |||| |||| ||||||  |||||||||||    
T  5835623 ggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagtttaatcatt 5835722  T
Q  300 taaaattt 307  Q
    ||||||||    
T  5835723 taaaattt 5835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 5994304 - 5994205
Alignment:
Q  213 attttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||| ||||||  ||||| |||||||||||||||| |||||| || | ||||||||| ||||  || ||||||| |  ||||||||||||||||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 5994205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 11741944 - 11741833
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||  ||   | || | ||||||| | ||||  ||  |||||||| |||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  11741844 aaaatttcgtcc 11741833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 16156856 - 16156967
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| || |||  |||||||||||||||||||||| ||  || || | | ||||||| ||||  || ||||||| |  ||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 16156955  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  16156956 aaaatttcgtcc 16156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 311
Target Start/End: Original strand, 21287799 - 21287854
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  21287799 taatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttcgtc 21287854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 5024017 - 5024131
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||  | ||| || | ||||||||| ||||  ||  |||||| |   ||||||    
T  5024017 ttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatca 5024116  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||| ||||    
T  5024117 tttaaaattttgtcc 5024131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 6757891 - 6757977
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | ||||||||||||||||||||||| ||| ||| |  ||||||||||||||||| ||||    
T  6757891 aattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatcatttaaaatttggtcc 6757977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 13963257 - 13963147
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||| ||||| |||||| |||||| |||||||||||||||| ||  || || | | ||||||| ||||  || ||||||| |  |||||||||    
T  13963257 ggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 13963158  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  13963157 taaaatttcgt 13963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 19518034 - 19517928
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||||| |||||||||||||| ||| || | ||||||| | ||||  ||  |||||| |  ||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 19517935  T
Q  301 aaaattt 307  Q
    |||||||    
T  19517934 aaaattt 19517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 19892310 - 19892420
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||| || ||| || | | ||||||| ||||  ||  |||| | |  |||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcattta 19892409  T
Q  302 aaatttcgtcc 312  Q
    |||||||||||    
T  19892410 aaatttcgtcc 19892420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 42265735 - 42265841
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||||| |||||| |||    
T  42265735 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatgatt 42265834  T
Q  300 taaaatt 306  Q
    |||||||    
T  42265835 taaaatt 42265841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 35512540 - 35512431
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | || |||||| ||||  ||  |||||| |  |||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcattta 35512441  T
Q  302 aaatttcgtc 311  Q
    ||||||||||    
T  35512440 aaatttcgtc 35512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 41930894 - 41930801
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||| |||||||| ||| |||||||||| || | | |||||||||||||| ||||||||  |||||| |  ||||||||||||||||| ||||    
T  41930894 tccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtcc 41930801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 297391 - 297295
Alignment:
Q  220 ccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||| |||||||| | | |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  297391 ccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 297295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 28269422 - 28269534
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||||| || |   || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  28269422 ggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcatt 28269521  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  28269522 taaaatttcgtcc 28269534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 32242669 - 32242558
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||| |||||||||||||| | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  32242669 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcc-tgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 32242571  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  32242570 taaaattttgtcc 32242558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 39453727 - 39453615
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | || | ||||||| | ||||  ||  |||||| |  |||||||||    
T  39453727 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatt 39453628  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  39453627 taaaatttcgtcc 39453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 28770869 - 28770916
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  28770869 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaatt 28770916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 38442494 - 38442383
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||  |||| | || | | ||||||| ||||  ||  |||||| |  |||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccattt 38442395  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  38442394 aaaatttcgtcc 38442383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 31482761 - 31482683
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  31482761 tttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 31482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 5255044 - 5255128
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||||| ||| |||| |||||| |||||| |||| ||||||||||  |||| || ||||||||  |||||||||||||||||||||    
T  5255044 aattagaggttgtttgaaaattggttcatgtaatcgctaatcctgcaaattaac-cttgcatttattaatcatttaaaatttcgtc 5255128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 5835857 - 5835748
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||| |||||||||||||| ||||||  ||||||| || ||||||||||| |||  | || | ||||||||| |||| |||  ||||||   |||||||    
T  5835857 tttggtttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatc 5835758  T
Q  297 atttaaaatt 306  Q
    ||||||||||    
T  5835757 atttaaaatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 6301969 - 6301859
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||  ||  |||||||||||||||||||||| || | | || | | ||||||| ||||  || ||||||| |  |||||||||    
T  6301969 ggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 6301872  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  6301871 taaaatttcgtcc 6301859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 11047861 - 11047753
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  || ||||||||||||||||||| | |||| || |  |||||||| ||||  ||  |||||| |  ||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaatt-ggtcatgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 11047763  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  11047762 aatttcgtcc 11047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 43159239 - 43159130
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | |||||||||  |||  ||  |||||| |  ||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaa 43159140  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  43159139 aatttcgtcc 43159130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 18247504 - 18247460
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaa 244  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||    
T  18247504 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaa 18247460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 8322827 - 8322720
Alignment:
Q  205 aaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaa 304  Q
    |||||||||||| ||||||  |||||||||||||||||||||| || |   || | | ||||||| ||||  ||  |||||| |  ||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaa 8322728  T
Q  305 tttcgtcc 312  Q
    ||||||||    
T  8322727 tttcgtcc 8322720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 31006717 - 31006756
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaa 242  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  31006717 ttaaatatgtatttcatccttataattagaggtcgtttaa 31006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 1506005 - 1506083
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  1506005 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 1506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 21265169 - 21265255
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||||||||||||||| || ||| || ||||||||||| ||||  ||  |||||| |  ||||| ||||||||||||||||    
T  21265169 aattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcc 21265255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 24547177 - 24547251
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    |||||||||||||| || ||||||  |||||||||||||| ||||||| || | | |||| ||||||||| ||||    
T  24547177 ggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaa 24547251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 5256408 - 5256327
Alignment:
Q  232 gggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccc 313  Q
    |||||||||||||||| ||  || ||||  |||||||| |||| |||  ||| ||||  |||||||||||||||||||||||    
T  5256408 gggtcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgttaatcatttaaaatttcgtccc 5256327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 21257586 - 21257542
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaatt 21257542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 24141490 - 24141566
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||||||| || | | |||| | |||||||||||| |||  ||||||  |||||||||||||||||||| |||||    
T  24141490 tttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttcatccct 24141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 27937424 - 27937380
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaatt 27937380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaat 246  Q
    ||||||||||||||| |||| |  |||||||||||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 44714188 - 44714073
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||    
T  44714188 ggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 44714090  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  44714089 taaaatttcgtccctct 44714073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 11163451 - 11163335
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||||||||||||||||   |||||||||||||||||    
T  11163451 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatt 11163352  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  11163351 taaaatttcgtccctct 11163335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 15848088 - 15848204
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||| |||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||| ||||||| |||||||||||||||||||    
T  15848088 ggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatt 15848187  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  15848188 taaaatttcgtccctct 15848204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 37895778 - 37895659
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||| |||||||||||||| ||||||  ||||| |||||||||||||| | ||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  37895778 tttggattaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatc 37895679  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  37895678 atttaaaatttcgtccctct 37895659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 16099052 - 16099171
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| || |||  ||||||||||| |||||||||| || | | ||||  |||||||||||||||||| | ||||||||||||||    
T  16099052 tttggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatc 16099151  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  16099152 atttaaaatttcgtccctct 16099171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 36755094 - 36755209
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||  |||||||||  |||||||| ||| ||||||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcattt 36755193  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||| ||||    
T  36755194 aaaatttcgtctctct 36755209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 39498317 - 39498426
Alignment:
Q  207 atatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatt 306  Q
    |||||||||| |||||| ||||||||||||||||||||||| || | | |||| | ||||||||||||||||| | | ||||||||||||||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatt 39498416  T
Q  307 tcgtccctct 316  Q
    ||||||||||    
T  39498417 tcgtccctct 39498426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 6657878 - 6657994
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||| ||||||||||||||||| || | | ||||  |||||| ||||||||||| | |||||||||||||||||    
T  6657878 ggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatt 6657977  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  6657978 taaaatttcgtccctct 6657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 36382161 - 36382277
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||| ||||||||| ||||||  |||||||| ||||||||||||| || | | |||| |||||||||| |||||||| |||||||||||||||||||    
T  36382161 ggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcatt 36382260  T
Q  300 taaaatttcgtccctct 316  Q
    ||||||||| |||||||    
T  36382261 taaaatttcatccctct 36382277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 45556112 - 45556228
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||| || | | |||| ||||||||||||||||||  | |||||||||||||||||    
T  45556112 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatt 45556211  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  45556212 taaaattttgtccctct 45556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 2318160 - 2318274
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||| | ||||||||||| ||  || |||| |||||| |||||||||||| ||||||||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattaggg-tagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2318258  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  2318259 aaaatttcgtccctct 2318274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 22051422 - 22051305
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| || |||  |||||| ||| ||||||||||||||   | |||| ||||||||| ||||||||| ||||||||||||||||||    
T  22051422 tggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcat 22051323  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||| ||||    
T  22051322 ttaaaatttcgtctctct 22051305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 39423515 - 39423631
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||| |||||| |||||| |||||| |||||||||||||||| ||   | |||| |||||| |||||||||||  |||| ||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatt 39423614  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  39423615 taaaatttcgtccctct 39423631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 36479719 - 36479830
Alignment:
Q  202 cttaaatatgtattttatccttat-aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    ||||||||||||||| ||||||   |||||||||||||||||||||| || ||| |||| ||||||| | ||| ||||| ||||||||||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcattt 36479818  T
Q  301 aaaatttcgtcc 312  Q
    ||||||||||||    
T  36479819 aaaatttcgtcc 36479830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 8710868 - 8710782
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  8710868 aattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 8710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 10712725 - 10712839
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||| ||||||||| ||||||  |||||||| ||||||||||||| || | | ||||   ||||||||||||||||| |||||||||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcattta 10712824  T
Q  302 aaatttcgtccctct 316  Q
    ||||||| |||||||    
T  10712825 aaatttcatccctct 10712839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 15604365 - 15604451
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15604365 aattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 15604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 28226144 - 28226060
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28226144 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 28226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 34447813 - 34447928
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||| || | | |||| || ||||||| |||||||| ||||||||||||||| |||    
T  34447813 ggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataatt 34447912  T
Q  300 taaaatttcgtccctct 316  Q
    | |||||||||| ||||    
T  34447913 t-aaatttcgtctctct 34447928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 15604756 - 15604653
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||| |||| |||||  ||||||| ||| |||||||| |||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15604756 atgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 15604657  T
Q  309 gtcc 312  Q
    ||||    
T  15604656 gtcc 15604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 25231276 - 25231162
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || ||| || | ||||||||| |||| |||| ||||||   ||||||||||    
T  25231276 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatt 25231177  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  25231176 taaaatttcgtccct 25231162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 6588686 - 6588795
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||  |||||||| |||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  303 aatttcgtcc 312  Q
    ||||||||||    
T  6588786 aatttcgtcc 6588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 6573073 - 6573162
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| ||| |||||||||| || ||| |||| ||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  6573073 aattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaatttac-cttgcattgtttaatcatttaaaaattcgtccctct 6573162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 8342225 - 8342299
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||  || |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8342225 tttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaaaatttcgtcc 8342299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 6573569 - 6573658
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctc 315  Q
    ||||||| ||| |||||||||| || ||| |||| ||||||||||||||||||| |||| ||||||||||||||||||| || |||||||    
T  6573569 aattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaaaaatttgtccctc 6573658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 11830402 - 11830475
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||| | | ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  11830402 tttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtc 11830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 41588465 - 41588376
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||||| ||||||| ||| ||||||||||||| | | |||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  41588465 tccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcatttaaaatttc 41588376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 202778 - 202670
Alignment:
Q  206 aatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaat 305  Q
    ||||||| |||| ||| | |||||||||||| |||||||||| || ||| |||| | |||||||||||| |||  ||||||  |||||||||||||||||    
T  202778 aatatgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaat 202679  T
Q  306 ttcgtccct 314  Q
    |||||||||    
T  202678 ttcgtccct 202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 36755516 - 36755404
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||| ||||  ||  |||||| |  |||||||||    
T  36755516 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatt 36755417  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  36755416 taaaatttcgtcc 36755404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 14900852 - 14900764
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||||||| || | | |||||||||||||||||||||||  |||| ||   ||||||||||||||||||||||||||    
T  14900852 aattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtat--gttaatcatttaaaatttcgtccctct 14900764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 25892432 - 25892510
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || ||| |||| |||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||    
T  25892432 tttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatttaaaaattcgtccctct 25892510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 30729619 - 30729733
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||  |||||||||||||| || | | || | ||||||||| |||| || | |||||||| |||||||     
T  30729619 ttggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcg 30729718  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  30729719 tttaaaatttcgtcc 30729733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 8342586 - 8342493
Alignment:
Q  219 tccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||||||| ||| |||||||||||||   | ||||   |||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  8342586 tccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaattatttaaaatttcgtcc 8342493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 10713152 - 10713039
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||| |||  | || | ||||||||| |||| |||  |||||| |  ||||||||    
T  10713152 tggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcat 10713053  T
Q  299 ttaaaatttcgtcc 312  Q
    ||||||| ||||||    
T  10713052 ttaaaatgtcgtcc 10713039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 3555250 - 3555362
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | | || ||||  ||| |||  |||||||| ||||||||||    
T  3555250 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcatt 3555349  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  3555350 taaaatttcgtcc 3555362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 3653482 - 3653391
Alignment:
Q  225 taattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctt 317  Q
    |||||| ||||| |||||||||| || ||| |||| | ||||| |||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  3653482 taattatgggtcatttaaaaattggtccatgtaatcgttaatc-tggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctctt 3653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 15848516 - 15848404
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||||| |||||| ||||||  |||||||||||||||||||||| ||| || || | ||||||||| || |  ||  |||||| |  |||||||||    
T  15848516 ggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatcatt 15848417  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  15848416 taaaatttcgtcc 15848404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 36382555 - 36382443
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||  ||||  || ||||||| |  |||||||||    
T  36382555 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatcatt 36382456  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  36382455 taaaatttcgtcc 36382443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 39423943 - 39423831
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||  | | | || | ||||||||| ||||  || ||||||| |  |||||||||    
T  39423943 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatcatt 39423844  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  39423843 taaaattttgtcc 39423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 44713799 - 44713907
Alignment:
Q  204 taaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaa 303  Q
    ||||||||||||| |||||| |||||| |||||||||||||||| ||  || || | ||||||||| ||||  ||  |||||| |  |||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaa 44713898  T
Q  304 atttcgtcc 312  Q
    |||||||||    
T  44713899 atttcgtcc 44713907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 314
Target Start/End: Original strand, 25230101 - 25230216
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| |||| |  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |   |||||||    
T  25230101 tggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcat 25230200  T
Q  299 ttaaaatttcgtccct 314  Q
    ||||||||||||||||    
T  25230201 ttaaaatttcgtccct 25230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 39498707 - 39498600
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||| || ||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  39498707 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 39498608  T
Q  300 taaaattt 307  Q
    ||||||||    
T  39498607 taaaattt 39498600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 44045430 - 44045315
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  44045430 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 44045331  T
Q  300 taaaatttcgtccctc 315  Q
    |||||||| |||||||    
T  44045330 taaaattttgtccctc 44045315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 45556475 - 45556428
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  45556475 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaatt 45556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 2318938 - 2318884
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcat 254  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||    
T  2318938 ggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcat 2318884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 6307147 - 6307038
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||| ||  |||||| ||||||||||||||| || | | |||| | |||||||  ||| ||| || |||||| ||||||||    
T  6307147 ttggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggtccctataatcgttaatccttacaaattagtcctgcattatttaatca 6307049  T
Q  298 tttaaaatttc 308  Q
    |||||||||||    
T  6307048 tttaaaatttc 6307038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 9076496 - 9076448
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  9076496 tggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaatt 9076448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 16099452 - 16099340
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || |  |||||||| ||||  ||  |||||| |  |||||||||    
T  16099452 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatt 16099353  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  16099352 taaaatttagtcc 16099340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 34448223 - 34448111
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||| |||||||| ||||||  |||||||||| ||||||||||| || | | || | | ||||||| ||||  || ||||||| |  |||||||||    
T  34448223 ggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatcatt 34448124  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  34448123 taaaatttcgtcc 34448111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 37895347 - 37895455
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  37895347 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 37895446  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  37895447 taaaatttc 37895455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 6577667 - 6577588
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctt 317  Q
    |||||||||| || | | |||| || ||||||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  6577667 tttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaaatccgtccctctt 6577588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 6658278 - 6658163
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||| ||||||||||||||| || | | || | ||||||||| ||||  ||  ||| || |  ||||||    
T  6658278 tttggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatc 6658179  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||| ||||    
T  6658178 atttaaaatttagtcc 6658163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 1696099 - 1696021
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| |||| | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  1696099 tttaaaaattcgttcctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 1696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 6589761 - 6589679
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||| ||||| |||||||||| || ||| |||| | |||| ||||||| |||| ||||||  ||||||||||||||||||||    
T  6589761 aattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 11163052 - 11163166
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||| ||  |||||  ||||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  |||||||    
T  11163052 ttggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 11163151  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||| ||||    
T  11163152 tttaaaatttagtcc 11163166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 21370633 - 21370583
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||||| |||||| ||||||  |||||||||||||||    
T  21370633 tttggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaatt 21370583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 25893590 - 25893536
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||| ||||||| || |||||||| |||||||||||||||||||||||| |||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaaattcgt 25893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 33739741 - 33739819
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  33739741 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 33739819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 36480144 - 36480034
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||| |||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataattta 36480045  T
Q  302 aaatttcgtcc 312  Q
    |||||||||||    
T  36480044 aaatttcgtcc 36480034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 3556438 - 3556329
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    ||||||||||||  |||| ||||||  ||||| |||||||||||||||| ||   | |||| | ||||||| ||||  ||  |||||||| |||||||||    
T  3556438 tggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcat 3556339  T
Q  299 ttaaaatttc 308  Q
    ||||||||||    
T  3556338 ttaaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 13692637 - 13692536
Alignment:
Q  211 gtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||||||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgt 13692538  T
Q  311 cc 312  Q
    ||    
T  13692537 cc 13692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 39936612 - 39936563
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  39936612 taatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtcc 39936563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 41587297 - 41587342
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||    
T  41587297 taatcctggaaaattacccttgcattgtttaatcatttaaaatttc 41587342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 13996032 - 13995954
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  13996032 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 13995954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 28230167 - 28230057
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| ||||||| |||  ||| | |||||| ||||| |||||||||| || | | |||| | ||||||| |||| |||| ||| ||  |||||||||||    
T  28230167 ggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatt 28230068  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  28230067 taaaatttcgt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 33062409 - 33062331
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||| ||||||||||||||    
T  33062409 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttataatttcgtccctct 33062331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 39935481 - 39935563
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| || ||||||||||| |||| | |||| | |||||||| ||| |||  ||||||  ||||||||||||||||||||    
T  39935481 aattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaatcatttaaaatttc 39935563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 41248918 - 41248840
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  41248918 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 41248840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 28228696 - 28228777
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||||||| |||||||||| || | | |||| | ||||| |||||| |||||||| ||  |||||||||||| ||||||    
T  28228696 aattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatcatttgaaattt 28228777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 10935791 - 10935910
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||| ||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| ||||||||||||||||    
T  10935791 tttggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 10935890  T
Q  297 atttaaaatttcgtccctct 316  Q
    ||||||||||||||||||||    
T  10935891 atttaaaatttcgtccctct 10935910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 17102020 - 17102136
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | |||||||||||||||||    
T  17102020 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 17102119  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  17102120 taaaatttcgtccctct 17102136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 28469436 - 28469320
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | ||||||||||||||||| |||||||||||||||||||    
T  28469436 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 28469337  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  28469336 taaaatttcgtccctct 28469320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 45011032 - 45010916
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| || | ||||||||| ||||||||| |||||||||||||||||||    
T  45011032 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatt 45010933  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||| ||||    
T  45010932 taaaatttcgtctctct 45010916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 6253472 - 6253587
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | ||||||||||||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 6253571  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  6253572 aaaatttcgtccctct 6253587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 42731418 - 42731535
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||| | ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | ||||||||||||||||    
T  42731418 tggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 42731517  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  42731518 ttaaaatttcgtccctct 42731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 23181421 - 23181306
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||| ||  |||||||||||||||||| ||| || ||| |||| ||||||| ||||||||||| ||||||||||||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  23181321 aaaatttcgtccctct 23181306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 32299132 - 32299017
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||  ||||||| |||||||||||||| || | | |||| ||||||||||||||||||| |||||||||||||||||||     
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattg 32299033  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||||||||||||    
T  32299032 aaaatttcgtccctct 32299017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 42020022 - 42019909
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||| ||||||||||| |||| | |||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaa 42019923  T
Q  303 aatttcgtccctct 316  Q
    ||||||||| ||||    
T  42019922 aatttcgtctctct 42019909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 6571013 - 6571129
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | |||||||| |||||||| |||||||||||||||||||    
T  6571013 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatt 6571112  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  6571113 taaaattttgtccctct 6571129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 19204489 - 19204605
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| | |||| |||||||||||| |||||||||||||||||||    
T  19204489 ggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcatt 19204588  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  19204589 taaaattttgtccctct 19204605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 22871705 - 22871589
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | |||| ||||||||| ||||||||| |||||||||||||||||||    
T  22871705 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatt 22871606  T
Q  300 taaaatttcgtccctct 316  Q
    ||||||||| |||||||    
T  22871605 taaaatttcttccctct 22871589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 27991739 - 27991855
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||| |||||  | | | |||| ||||||||||||||||||| | |||||||||||||||||    
T  27991739 ggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 27991838  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  27991839 taaaatttcgtccctct 27991855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 2640608 - 2640490
Alignment:
Q  199 tggcttaaat-atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |    | |||| |||||| |||||||||||| |||||||||||||||||    
T  2640608 tggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatca 2640509  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||| ||||    
T  2640508 tttaaaatttcgtctctct 2640490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 27397023 - 27396907
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| |||||||||| ||||| ||   |||||||||||||||||    
T  27397023 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatt 27396924  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  27396923 taaaatttcgtccctct 27396907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 42618311 - 42618225
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42618311 aattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 42618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 42617908 - 42618023
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||||||||  |||| |||  |||||  ||||||| ||| ||||||||||||| | |||||| |||||||||| |||||||| ||||||||||||||||    
T  42617908 tttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatc 42618007  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||||||||    
T  42618008 atttaaaatttcgtcc 42618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 2640178 - 2640290
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| || | | || | ||||||||| |||| ||| ||||||| |  |||||||||    
T  2640178 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcatt 2640277  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  2640278 taaaatttcgtcc 2640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 5457335 - 5457220
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | | ||||||| |||| |||| ||| || ||||||||||||    
T  5457335 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatt 5457236  T
Q  300 taaaatttcgtccctc 315  Q
    ||||||||||||||||    
T  5457235 taaaatttcgtccctc 5457220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 40379774 - 40379885
Alignment:
Q  205 aaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaa 304  Q
    |||||||||||| ||||||  |||||||||||||||||||||| ||   | || | ||||||||| |||||||||  ||| |||||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaa 40379873  T
Q  305 tttcgtccctct 316  Q
    ||||||||||||    
T  40379874 tttcgtccctct 40379885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 24388821 - 24388935
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||| ||   | || | ||||||| ||||||||||| |||| |||||||||||| |||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcactta 24388920  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  24388921 aaatttcgtccctct 24388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 32680966 - 32680876
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || ||| |||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  32680966 aattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 32680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 42362448 - 42362562
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||| |||||||||||||| || | | || | | ||||||| |||| |||| |||||||| ||||||||    
T  42362448 ttggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatca 42362547  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  42362548 tttaaaatttcgtcc 42362562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 43266666 - 43266580
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  43266666 aattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 43266580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 22081947 - 22081874
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||||  | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22081947 tttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 22081874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 32934748 - 32934663
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  32934748 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcatttaaaatttcgtc 32934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 37656855 - 37656968
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||  ||||||||||||| ||   | |||| ||||||||| ||||||||| ||||||||||||| | ||||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaa 37656954  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  37656955 aatttcgtccctct 37656968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 32068134 - 32068206
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32068134 tttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 32068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 25628504 - 25628590
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatt-taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| |||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25628504 aattaggcgtcatttaaaaattagt-cattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 25628590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 32934357 - 32934460
Alignment:
Q  209 atgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    |||| ||| ||||||  ||||||| ||| |||||||||||||   | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  32934357 atgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 32934456  T
Q  309 gtcc 312  Q
    ||||    
T  32934457 gtcc 32934460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 25453154 - 25453240
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  25453154 aattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtcc 25453240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 25628866 - 25628792
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||  || |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  25628866 tttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 25628792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 32053545 - 32053455
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||| ||||||||||||| |||| | |||| | ||||||| ||||||||   |||||||||||||||||||||||||||||||||||    
T  32053545 aattagggatcgtttaaaaattggttcctataatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttcgtccctct 32053455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 43266292 - 43266374
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||| ||| ||||||||||||| ||| |||| | |||||||| |||||||| ||||||||||||||||||||||||||||    
T  43266292 aattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 43266374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 28890617 - 28890690
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||||| | | |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28890617 tttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 28890690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 32068496 - 32068411
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||| | | | |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  32068496 aattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatttaaaatttcgtc 32068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 33828374 - 33828289
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||   | |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  33828374 aattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 33828289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 16804047 - 16803967
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatt 306  Q
    |||||||||||||||||||||| || | | |||| || |||||| ||||||||| ||||||||||||||||||||||||||    
T  16804047 aattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 27396629 - 27396737
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||| || ||| || | ||||||||| ||||  || ||||||| |  |||||||||    
T  27396629 ggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 27396728  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  27396729 taaaatttc 27396737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 10600349 - 10600263
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||| ||||||| ||||    
T  10600349 aattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaaaattttgtcc 10600263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 13386178 - 13386068
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |||||||||    
T  13386178 tttggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatc 13386079  T
Q  297 atttaaaattt 307  Q
    |||||||||||    
T  13386078 atttaaaattt 13386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 22081598 - 22081671
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  22081598 tttaaaaattagtcc-tctaatcgctaatgctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 22081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 23058467 - 23058541
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| | | ||||| |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  23058467 tttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatttaaaatttcgtcc 23058541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 27138329 - 27138259
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 308  Q
    ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27138329 tttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 27138259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 33808321 - 33808435
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| || |||  ||||| | |||||||||||||| ||   | || | ||||||||| |||| ||| ||||||||| ||||||||    
T  33808321 ttggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatca 33808420  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  33808421 tttaaaatttcgtcc 33808435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 17102417 - 17102305
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  17102417 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcatt 17102318  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  17102317 taaaatttagtcc 17102305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 45010654 - 45010710
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  45010654 taatcgctaatcttggcaatttacgcttgcattgtttaatcatttaaaatttcgtcc 45010710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 20426758 - 20426643
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||| ||||||||||||||| || | | || | ||||||||||||| ||||| ||  ||  |||||||||||    
T  20426758 ggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatt 20426659  T
Q  300 taaaatttcgtccctc 315  Q
    |||||||| |||||||    
T  20426658 taaaatttagtccctc 20426643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 25453529 - 25453442
Alignment:
Q  225 taattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| | ||| ||||||||||||| | |  ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  25453529 taattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatttaacatttcgtcc 25453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 3914194 - 3914255
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctt 317  Q
    |||| |||||| || |||||||||  ||||||||||||||||||||||||||||||||||||    
T  3914194 taatcgctaattctagcaatttacatttgcattgtttaatcatttaaaatttcgtccctctt 3914255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 23058817 - 23058744
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||||||| | | | |||| | ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  23058817 tttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcatttaaaatttcgtc 23058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 29144410 - 29144302
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattg-ctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||  ||| |  |||||||||||||||||||||| | |||| |||| |  ||||||| |||| ||||  |||||||||||||||||    
T  29144410 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaatt-ggtcatataatcgtttaatccttgcaacttacctttgcattgtttaatcat 29144312  T
Q  299 ttaaaatttc 308  Q
    ||||||||||    
T  29144311 ttaaaatttc 29144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 40380113 - 40380000
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||||| |||||||||||||| || ||| || | || |||||| ||||  ||  |||||| |  ||||||||    
T  40380113 tggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcat 40380014  T
Q  299 ttaaaatttcgtcc 312  Q
    ||||||||||||||    
T  40380013 ttaaaatttcgtcc 40380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 48789168 - 48789115
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  48789168 taattctggcaatttacccttgcattgtttaatcatttaaaatttcatccctct 48789115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 6253868 - 6253756
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||   | ||||||| |  |||||||||    
T  6253868 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatcatt 6253769  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  6253768 taaaatttagtcc 6253756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 10936222 - 10936110
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||| ||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  10936222 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 10936123  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  10936122 taaaatttcgtcc 10936110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 18856056 - 18855968
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||||||| |||||||||| || | | |||| | ||||| |||||| |||| ||||||  ||||||||||||||||||||||||||    
T  18856056 aattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtccct 18855968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 19204884 - 19204812
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    |||||||||| |||| ||||||| |||||||||| ||||||||||| |||||| |||| ||||||||| ||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaa 19204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 24389213 - 24389101
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || ||| || | ||||||||| ||||  ||   ||||| |  |||||||||    
T  24389213 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcatt 24389114  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  24389113 taaaattttgtcc 24389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 28469010 - 28469122
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||| | ||||  ||  |||||| |  |||||||||    
T  28469010 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcatt 28469109  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  28469110 taaaatttcgtcc 28469122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 42731847 - 42731800
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  42731847 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaatt 42731800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 32680621 - 32680707
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| |||| | ||||||||||||||| |||||||  |||||| |  ||||||||||||||||| ||||    
T  32680621 aattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatttaaaatttggtcc 32680707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 39274908 - 39274982
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||||||   | |||| ||||||||| | |||||||  |||||||||||||||||||||||||||||||    
T  39274908 tttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaaaatttcgtcc 39274982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 43124548 - 43124466
Alignment:
Q  232 gggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||| |||||||||| || | | |||| |||||||||  |||  ||| ||||||||||||||||||||||||||||||||||    
T  43124548 gggtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccct 43124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 46204447 - 46204533
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||| |||| ||||||||  ||||||| ||| |||||||||||||||||||    
T  46204447 aattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatttaaaatttcgtcc 46204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 46205697 - 46205623
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||| ||| |||| | |||| | |||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  46205697 tttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtcc 46205623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 27992133 - 27992024
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 27992034  T
Q  303 aatttcgtcc 312  Q
    ||||| ||||    
T  27992033 aatttagtcc 27992024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 18670293 - 18670177
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||| | || | | || | | ||||||| ||||||| | ||  ||  |||||||||    
T  18670293 ttggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaatca 18670194  T
Q  298 tttaaaatttcgtccct 314  Q
     ||||||||| ||||||    
T  18670193 cttaaaatttggtccct 18670177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 48788803 - 48788911
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| || |||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  48788803 ggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 48788902  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  48788903 taaaatttc 48788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 13044728 - 13044786
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||| |||| ||||| ||||||||  ||||||||||||||||||||||| |||||||||    
T  13044728 taatcgctactcctgacaatttaccattgcattgtttaatcatttaaaaattcgtccct 13044786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 30948519 - 30948441
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  30948519 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 30948441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 32053143 - 32053189
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaat 246  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||    
T  32053143 ggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaat 32053189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 32687397 - 32687507
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||| ||||||| |||| ||||| |||||||||||| ||||||| || || | | |||| | |||||||||||| || | ||||||    |||||||||    
T  32687397 ggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatt 32687496  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  32687497 taaaatttcgt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 32298777 - 32298822
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaa 245  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  32298777 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaa 32298822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 37657267 - 37657218
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  37657267 ttggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaatt 37657218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 42019598 - 42019671
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaa 274  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||| || ||| || | ||||||||| ||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 42019671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 47946901 - 47946856
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaat 246  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  47946901 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaat 47946856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 47952331 - 47952286
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaat 246  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  47952331 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaat 47952286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 28105501 - 28105548
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  28105501 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatt 28105548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 29141604 - 29141557
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||||    
T  29141604 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt 29141557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 34793904 - 34793951
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||    
T  34793904 ggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaatt 34793951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 12229444 - 12229386
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||| |||||||| ||| ||| |||||||  ||||||||||| ||||||||||||||    
T  12229444 taattgttaatcctgacaaattattcttgcaaagtttaatcattaaaaatttcgtccct 12229386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 34929009 - 34928931
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  34929009 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 34928931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 39686893 - 39686815
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  39686893 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 39686815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 32688620 - 32688532
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||||||| ||||||| || || | | |||| |||||||||| ||| || | ||||||    ||||||||||||||||||||||||    
T  32688620 aattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttcgtccct 32688532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 43123174 - 43123222
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||||||||||||||  ||| |  ||||||||||||||||||||||    
T  43123174 tggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaatt 43123222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 33517537 - 33517650
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||| || | | |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 33517636  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  33517637 aatttcgtccctct 33517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 30337449 - 30337565
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| ||||||||| |||||||||    
T  30337449 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatt 30337548  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  30337549 taaaatttcgtccctct 30337565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 21628141 - 21628025
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||||||| || | | |||| |||||||||| |||||||| |||||||||||||||||||    
T  21628141 ggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 21628042  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||| ||||||||    
T  21628041 taaaattttgtccctct 21628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 17734590 - 17734475
Alignment:
Q  201 gcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattt 300  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||||||  | ||| |||| |||||||||  |||||||| ||||||||||||||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcattt 17734491  T
Q  301 aaaatttcgtccctct 316  Q
    ||||||| ||||||||    
T  17734490 aaaattttgtccctct 17734475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 3059260 - 3059373
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  ||||| |||||||||||||  | || ||| |||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  3059260 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 3059359  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  3059360 aatttcgtccctct 3059373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 12080638 - 12080752
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||| ||||||| ||||||  ||||||||||||||||||||||  | | | |||| ||||||| ||||||||||| | |||||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcattta 12080737  T
Q  302 aaatttcgtccctct 316  Q
    |||||||||||||||    
T  12080738 aaatttcgtccctct 12080752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 21836456 - 21836344
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||  |||| ||| ||||||  ||||||| ||| ||||||||||||||| | |||| |||||||||| |||||||| |||||||||||||||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 21836357  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  21836356 taaaatttcgtcc 21836344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 7160830 - 7160916
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||||||   | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7160830 aattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 7160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 30725759 - 30725875
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| || |||  |||||||| ||||||||||||| ||   | |||| |||||||||| |||||||| |||||| |||||||||||    
T  30725759 tggcttaaatatgtatttcattcttgcaattaggg-tcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcat 30725857  T
Q  299 ttaaaatttcgtccctct 316  Q
    ||||||||||||||||||    
T  30725858 ttaaaatttcgtccctct 30725875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 30803864 - 30803977
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  || |||| ||||||||||||||  |  || |||| | ||||||||||||||||| ||| ||||||||||||||||||    
T  30803864 ttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 30803963  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  30803964 aatttcgtccctct 30803977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 17734196 - 17734308
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |||| | |||||||||||||| ||||  ||  |||||| |  |||||||||    
T  17734196 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcatt 17734295  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  17734296 taaaatttcgtcc 17734308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 26463162 - 26463294
Alignment:
Q  184 atatataaatttgttt-ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactct 282  Q
    |||||||||| | ||| ||||||||||||||||| |||| |  |||||||||||||||||||||| || | | || | | |||||||||||| |||| ||    
T  26463162 atatataaatatttttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattaccct 26463261  T
Q  283 tgcattgtttaatcatttaaaatttcgtccctc 315  Q
    ||||  |||||||||||||||||||||||||||    
T  26463262 tgcaaagtttaatcatttaaaatttcgtccctc 26463294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 8089443 - 8089557
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||   ||| |  |||||||||||||||||||||| || | | |||| | ||||||| |||| |||| |||||||||||||||||||    
T  8089443 ggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatt 8089542  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  8089543 taaaatttcgtccct 8089557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 21836058 - 21836143
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21836058 aattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 21836143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 22502800 - 22502886
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  22502800 aattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 22502886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 31407278 - 31407192
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  31407278 aattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 31407192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 6517529 - 6517614
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||||||   | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6517529 aattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttac-cttgcattgtttaatcatttaaaatttcgtcc 6517614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 7161204 - 7161119
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  7161204 aattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 7161119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 7905269 - 7905354
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  7905269 aattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtc 7905354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 15913574 - 15913659
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||||||||||||   | ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  15913574 aattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaaaatttcgtc 15913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 22503174 - 22503089
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  22503174 aattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatttaaattttcgtc 22503089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 8090355 - 8090241
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||  ||||||  |||||||||||||||||||||| || | | || |  |||||||| |||| |||| ||||||  |||||||||||    
T  8090355 ggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatt 8090256  T
Q  300 taaaatttcgtccct 314  Q
    |||||||| ||||||    
T  8090255 taaaatttggtccct 8090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 14196986 - 14196896
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||| |||||||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||||| ||||||    
T  14196986 aattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgcccctct 14196896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 30337847 - 30337734
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | |||| ||||||||| ||||  ||  |||||| |  ||||||||    
T  30337847 tggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcat 30337748  T
Q  299 ttaaaatttcgtcc 312  Q
    ||||||||||||||    
T  30337747 ttaaaatttcgtcc 30337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 32593516 - 32593601
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| ||||||||||||| | | |||| |||||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  32593516 aattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcatttaaaatttcgtc 32593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 33646970 - 33647079
Alignment:
Q  207 atatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatt 306  Q
    |||| ||||| ||||||| ||||| |||||||||||||| |  | | | |||| ||||||| || |||||||| |||||||| |||||||||||||||||    
T  33646970 atatctatttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatt 33647069  T
Q  307 tcgtccctct 316  Q
    ||||| ||||    
T  33647070 tcgtctctct 33647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 12081064 - 12080952
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||| || | | || | ||||||||| ||||  || ||||||| |  |||||||||    
T  12081064 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 12080965  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  12080964 taaaatttcgtcc 12080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 33517962 - 33517850
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  33517962 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatt 33517863  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  33517862 taaaatttcgtcc 33517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 11392866 - 11392949
Alignment:
Q  228 ttaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||| |||||||||||||| || | | |||| |||||||||   ||||||| |||||||||||||||||||||||||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttcgtc 11392949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 314
Target Start/End: Original strand, 12407507 - 12407622
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcat 298  Q
    |||||||||||||||||| ||||||| ||||| || ||||||||||||| ||   | || | ||||||||| | || ||||||| |||  ||||||||||    
T  12407507 tggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcat 12407606  T
Q  299 ttaaaatttcgtccct 314  Q
    ||||||||| ||||||    
T  12407607 ttaaaatttggtccct 12407622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 12408599 - 12408492
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||| || || | | || | ||||||||| |||| |||  ||||||  |||||||||||    
T  12408599 ggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcatt 12408500  T
Q  300 taaaattt 307  Q
    ||||||||    
T  12408499 taaaattt 12408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 15115336 - 15115451
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  |||||| | ||||||||||||| || | | |||| | ||||||| |||| |||  ||||||  ||||||||    
T  15115336 tttggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatc 15115435  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||| ||||    
T  15115436 atttaaaatttagtcc 15115451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 7905643 - 7905558
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    ||||||| ||| |||| ||||| || | | |||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  7905643 aattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcatttcaaatttcgtc 7905558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 315
Target Start/End: Complemental strand, 25486289 - 25486208
Alignment:
Q  234 gtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctc 315  Q
    |||||||||||||| || | | ||||||||||||| |||||||||  |||||| |  |||||||||||||||||||||||||    
T  25486289 gtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatcatttaaaatttcgtccctc 25486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 681156 - 681044
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| ||   | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  681156 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 681057  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  681056 taaaatttcgtcc 681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 3059684 - 3059576
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  3059684 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 3059585  T
Q  300 taaaatttc 308  Q
    |||||||||    
T  3059584 taaaatttc 3059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 21627713 - 21627825
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||||| |||||| || |||||||||||||  | ||| || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  21627713 ggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 21627812  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  21627813 taaaatttcgtcc 21627825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 30726187 - 30726075
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||| | |  |||||||||    
T  30726187 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcatt 30726088  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  30726087 taaaatttcgtcc 30726075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 33647379 - 33647267
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  33647379 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 33647280  T
Q  300 taaaatttcgtcc 312  Q
    |||||||| ||||    
T  33647279 taaaatttagtcc 33647267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 11434804 - 11434914
Alignment:
Q  202 cttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcattta 301  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||| || ||| || | ||||||| | ||||  ||  |||||| |  |||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattta 11434903  T
Q  302 aaatttcgtcc 312  Q
    |||||||||||    
T  11434904 aaatttcgtcc 11434914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 13379910 - 13379796
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| || | | || | |||||| || ||||  ||  |||||| |  |||||||||    
T  13379910 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcatt 13379811  T
Q  300 taaaatttcgtccct 314  Q
    |||||||||||||||    
T  13379810 taaaatttcgtccct 13379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 315
Target Start/End: Complemental strand, 15116663 - 15116545
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||| |||||||||||  |||||  |||||||||||||||||||||| || |   |||| ||||||||| ||||  ||  ||||||  ||||||||    
T  15116663 tttggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatc 15116564  T
Q  297 atttaaaatttcgtccctc 315  Q
    |||||||| || |||||||    
T  15116563 atttaaaaattggtccctc 15116545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 31406904 - 31406990
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| | ||||||||| |||||   |||||||| |||||||||||||||||||||||    
T  31406904 aattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatttaaaatttcgtcc 31406990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 679866 - 679978
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||| ||   | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  679866 ggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 679965  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  679966 taaaatttcgtcc 679978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 12065258 - 12065329
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattg-tttaatcatttaaaatttcg 309  Q
    ||||||||||||| ||| |||| |||||| |||||||||||| |||| |||| ||||||||||||||||||||    
T  12065258 tttaaaaattagt-catgtaatcgctaattctggcaatttacccttgtattgttttaatcatttaaaatttcg 12065329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 20651010 - 20651122
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| |  |||||||| ||||||||||||| |||| | || | ||||||||| ||||   |  |||||| |  |||||||||    
T  20651010 ggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatcatt 20651109  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  20651110 taaaatttcgtcc 20651122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 28000726 - 28000666
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||||||| |||||||||||  |||||| |  ||||||||||||||||||||||||||    
T  28000726 taattgctaattctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctct 28000666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 24210556 - 24210647
Alignment:
Q  225 taattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||| |||||||||| ||   | |||||| ||||| | |||| |||| ||||||  |||||||||||||||||||| |||||||    
T  24210556 taattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttcatccctct 24210647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 25485991 - 25486065
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||||||||| || | | |||||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||    
T  25485991 tttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtcc 25486065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 8418466 - 8418359
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||| ||||||||||||||  ||||||  |||||||  ||||||||||||| |||| | |||| |||||| ||| ||||||||   |||||| ||||||     
T  8418466 tttgacttaaatatgtattc-atccttgcaattaggaatcgtttaaaaattggttcttgtaatcgctaattctgtcaatttacctatgcattatttaatt 8418368  T
Q  297 atttaaaat 305  Q
    |||||||||    
T  8418367 atttaaaat 8418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 30804286 - 30804242
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||    
T  30804286 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 30804242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 11393232 - 11393185
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    ||||||| ||||||||| ||| || |||||||||||||||||||||||    
T  11393232 ggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaatt 11393185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 363189 - 363111
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | |||||||||||||||||| ||||  | |||| |  |||||| |||||||||||||||||||    
T  363189 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctct 363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 14196641 - 14196727
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| |||||||||| || | | ||||||||||| |||||||||||   ||||| |  ||||||||||||||||| ||||    
T  14196641 aattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatcatttaaaatttggtcc 14196727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 15913948 - 15913862
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||| ||||| |||||||||| || ||| |||| | ||||| ||| || |||| | || |||||||||| ||||||||||||||||    
T  15913948 aattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaataatttaaaatttcgtcc 15913862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 26464628 - 26464550
Alignment:
Q  199 tggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaattt 277  Q
    |||||||||||||||||| |||| |  ||||||||||| |||||||| | || | | || ||| |||||||||||||||    
T  26464628 tggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattt 26464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 22373047 - 22372978
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    |||||||||| || | | |||||||||||||||||| |||| || |||| |  |||||||||||||||||    
T  22373047 tttaaaaattcgtccctgtaattgctaatcctggcattttaatcctgcaattgttaatcatttaaaattt 22372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 10781521 - 10781477
Alignment:
Q  263 taatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    |||||||| |||||||  ||||||||||||||| |||||||||||    
T  10781521 taatcctgacaatttatccttgcattgtttaattatttaaaattt 10781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 22617886 - 22617930
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||||||||||||| ||||||  ||||||| ||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatt 22617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 28498427 - 28498339
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    |||||||| || |||||||||| || | | |||| ||||||||||||||  ||| ||  ||  ||||||||||||||||||| ||||||    
T  28498427 aattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaatttggtccct 28498339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 68963 - 69081
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||||||||| ||||||  ||||||||||| |||||||||| || | | ||||  |||||||||||||||||| |||||||||||||||||    
T  68963 ttggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatca 69062  T
Q  298 tttaaaatttcgtccctct 316  Q
    |||||||||||||||||||    
T  69063 tttaaaatttcgtccctct 69081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 69396 - 69281
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    |||||||||||||||||||| ||||||  ||||||  |||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  ||||||    
T  69396 tttggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 69297  T
Q  297 atttaaaatttcgtcc 312  Q
    ||||||||||||||||    
T  69296 atttaaaatttcgtcc 69281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 1769 - 1885
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||| ||||||| || | | |||| ||||||| ||||||||||| |||||||||||||||||||    
T  1769 ggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 1868  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  1869 taaaatttcgtccctct 1885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 2169 - 2059
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | |  ||||||||||| | ||||  ||  |||||| |  |||||||||    
T  2169 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcatt 2070  T
Q  300 taaaatttcgt 310  Q
    |||||||||||    
T  2069 taaaatttcgt 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 139675 - 139788
Alignment:
Q  203 ttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaa 302  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| || | | |||| ||||||||||||||||||| | || |||| ||||||||||||    
T  139675 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaa 139774  T
Q  303 aatttcgtccctct 316  Q
    ||||||||||||||    
T  139775 aatttcgtccctct 139788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 140071 - 140022
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaatt 247  Q
    |||| |||||||||||||| ||||||  |||||||||| |||||||||||    
T  140071 ttggtttaaatatgtatttgatccttgcaattaggggttgtttaaaaatt 140022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 37991 - 37875
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||| ||   | |||| |||||||||| |||||||| |||| ||||||||||||||    
T  37991 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatt 37892  T
Q  300 taaaatttcgtccctct 316  Q
    |||||||||||||||||    
T  37891 taaaatttcgtccctct 37875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 37562 - 37676
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatca 297  Q
    ||||||||||||| ||||| ||||||  |||||| | ||||||||||||| || | | || | |||||| || ||||  || ||||||| |  |||||||    
T  37562 ttggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatca 37661  T
Q  298 tttaaaatttcgtcc 312  Q
    |||||||||||||||    
T  37662 tttaaaatttcgtcc 37676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 11566 - 11455
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    |||||||  |||| ||| ||||||  ||||||| ||| ||||||||||||| ||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 11467  T
Q  300 taaaatttcgtc 311  Q
    ||||||||||||    
T  11466 taaaatttcgtc 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 11201 - 11252
Alignment:
Q  261 gctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11201 gctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 222189 - 222103
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  222189 aattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 221817 - 221902
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  221817 aattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 221902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 958 - 1032
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  958 tttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 1032  T

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Target: scaffold0388 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 12639 - 12555
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    ||||||| ||| ||||||||||||| | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12639 aattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgt 12555  T

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Target: scaffold0388; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 311
Target Start/End: Original strand, 12296 - 12351
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 311  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12296 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 12351  T

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Target: scaffold0599 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 2431 - 2505
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    ||||||||||| | | | |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  2431 tttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcc 2505  T

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Target: scaffold0205 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 21340 - 21250
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||| ||||||||||||||| || | | |||||||||||| |||||||||| ||||||| |  |||||||||||||||| |||||||||    
T  21340 aattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatcatttaaaattccgtccctct 21250  T

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Target: scaffold0205; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 21035 - 21116
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaattt 307  Q
    ||||||| ||| |||||||||| || | | |||||||||||||| ||||||||  |||||| |  |||||||||||||||||    
T  21035 aattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaattt 21116  T

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Target: scaffold0128 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 19854 - 19967
Alignment:
Q  197 tttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatc 296  Q
    ||||| ||||||||||||||  |||||  ||||| |||||||||||||||| || | | | || ||||||||| |||| ||||  ||||||| |||||||    
T  19854 tttggtttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatc 19953  T
Q  297 atttaaaatttcgt 310  Q
    ||||||||||||||    
T  19954 atttaaaatttcgt 19967  T

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Target: scaffold0707 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 6507 - 6395
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| || | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  6507 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatt 6408  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  6407 taaaatttcgtcc 6395  T

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Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 12150 - 12094
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcc 312  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  12150 taatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcc 12094  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 239951 - 239865
Alignment:
Q  228 ttaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccct 314  Q
    ||||||||| |||||||||| |||| | |||| | |||||||||||| |||| ||| ||  ||||||||||||||||||||||||||    
T  239951 ttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttcgtccct 239865  T

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Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 14419 - 14536
Alignment:
Q  190 aaatttgtttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattg 289  Q
    |||||| || ||||||||||||||||| ||| ||  ||||||| |||||||||||||||||  ||||| | ||||||||| ||||  ||  |||||| |     
T  14419 aaattttttaggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatc 14518  T
Q  290 tttaatcatttaaaattt 307  Q
     |||||||||||||||||    
T  14519 attaatcatttaaaattt 14536  T

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Target: scaffold0075; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 14820 - 14739
Alignment:
Q  198 ttggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttac 279  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||| ||   | |||| |||||||||||||||||||    
T  14820 ttggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaatttac 14739  T

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Target: scaffold0775 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 4962 - 5074
Alignment:
Q  200 ggcttaaatatgtattttatccttataattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatt 299  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||  | | | || | ||||||||| ||||  ||  |||||| |  |||||||||    
T  4962 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcatt 5061  T
Q  300 taaaatttcgtcc 312  Q
    |||||||||||||    
T  5062 taaaatttcgtcc 5074  T

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Target: scaffold0775; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 6380 - 6296
Alignment:
Q  226 aattaggggtcgtttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 310  Q
    |||||||||||  ||||||||| || | | |||| | ||||||| |||| |||| |||||| |||||||||||||||||||||||    
T  6380 aattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttcgt 6296  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 141935 - 141875
Alignment:
Q  256 taattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||||||||||| ||||  | |||| |  ||||||||||||||||||||||||||    
T  141935 taattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctct 141875  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 1271 - 1349
Alignment:
Q  238 tttaaaaattagttcatttaattgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    |||||||||| || | | ||||||||||||||| || ||||  | |||| |  ||||||||||||||||||||||||||    
T  1271 tttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctct 1349  T

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Target: scaffold0295 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 2215 - 2259
Alignment:
Q  272 caatttactcttgcattgtttaatcatttaaaatttcgtccctct 316  Q
    ||||||||  ||||||| |||||||||||||||||| ||||||||    
T  2215 caatttacctttgcattatttaatcatttaaaattttgtccctct 2259  T

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