View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6107_high_4 (Length: 282)

Name: NF6107_high_4
Description: NF6107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6107_high_4
NF6107_high_4
[»] chr4 (52 HSPs)
chr4 (1-185)||(39523397-39523581)
chr4 (1-185)||(394223-394416)
chr4 (1-149)||(20399852-20400000)
chr4 (1-185)||(477961-478153)
chr4 (9-147)||(6911706-6911844)
chr4 (1-147)||(29268726-29268872)
chr4 (1-149)||(13965584-13965732)
chr4 (4-149)||(7083768-7083913)
chr4 (1-185)||(43244330-43244523)
chr4 (9-149)||(22757118-22757258)
chr4 (1-149)||(26674396-26674544)
chr4 (1-149)||(38944097-38944244)
chr4 (9-149)||(43493244-43493384)
chr4 (9-147)||(30202064-30202202)
chr4 (1-185)||(39837573-39837767)
chr4 (1-149)||(22049353-22049502)
chr4 (1-149)||(25658191-25658339)
chr4 (10-185)||(44757000-44757184)
chr4 (1-149)||(50801241-50801389)
chr4 (1-147)||(24825675-24825821)
chr4 (1-149)||(19745413-19745561)
chr4 (1-149)||(19794245-19794393)
chr4 (1-138)||(24611748-24611885)
chr4 (1-149)||(7060348-7060495)
chr4 (1-149)||(7861155-7861302)
chr4 (1-149)||(8712554-8712702)
chr4 (1-149)||(24568662-24568810)
chr4 (1-144)||(6881985-6882128)
chr4 (1-177)||(20887705-20887889)
chr4 (1-129)||(11210262-11210390)
chr4 (1-149)||(26742412-26742560)
chr4 (9-149)||(51152149-51152288)
chr4 (1-147)||(12717066-12717213)
chr4 (1-170)||(13586189-13586362)
chr4 (1-147)||(5814373-5814518)
chr4 (9-149)||(45351027-45351169)
chr4 (9-149)||(45360506-45360648)
chr4 (1-138)||(8517405-8517542)
chr4 (1-149)||(2447824-2447972)
chr4 (15-143)||(626512-626639)
chr4 (17-137)||(29922873-29922993)
chr4 (1-149)||(24100163-24100312)
chr4 (1-180)||(27394814-27395002)
chr4 (1-150)||(36124297-36124445)
chr4 (10-110)||(28837128-28837228)
chr4 (1-149)||(42197576-42197725)
chr4 (15-138)||(27090759-27090882)
chr4 (91-149)||(31522006-31522064)
chr4 (57-116)||(32616830-32616889)
chr4 (1-51)||(31522067-31522118)
chr4 (1-51)||(56236771-56236821)
chr4 (80-147)||(3159068-3159136)
[»] chr3 (46 HSPs)
chr3 (1-147)||(11819109-11819255)
chr3 (1-147)||(48652397-48652543)
chr3 (1-185)||(14585441-14585634)
chr3 (10-185)||(31462712-31462896)
chr3 (27-144)||(41868277-41868394)
chr3 (1-149)||(31270350-31270498)
chr3 (1-149)||(3456967-3457111)
chr3 (1-147)||(33637429-33637575)
chr3 (1-149)||(54238975-54239123)
chr3 (1-148)||(22484990-22485137)
chr3 (1-144)||(36691756-36691899)
chr3 (39-149)||(35174728-35174838)
chr3 (27-149)||(38527287-38527409)
chr3 (1-149)||(40883823-40883974)
chr3 (1-143)||(30156238-30156381)
chr3 (4-147)||(32080714-32080857)
chr3 (9-147)||(55090548-55090686)
chr3 (9-149)||(40013237-40013380)
chr3 (2-137)||(2147762-2147898)
chr3 (1-149)||(36624652-36624799)
chr3 (10-149)||(24483645-24483783)
chr3 (39-149)||(19645245-19645355)
chr3 (1-185)||(53155387-53155580)
chr3 (1-149)||(49628052-49628192)
chr3 (1-147)||(1074851-1074996)
chr3 (1-138)||(39610247-39610382)
chr3 (9-129)||(19861244-19861365)
chr3 (9-117)||(55454922-55455030)
chr3 (1-147)||(105992-106139)
chr3 (39-137)||(13701967-13702065)
chr3 (65-149)||(34960879-34960963)
chr3 (63-185)||(48400878-48401009)
chr3 (1-149)||(4206471-4206616)
chr3 (66-129)||(34103739-34103802)
chr3 (1-182)||(53402612-53402793)
chr3 (65-149)||(27189414-27189499)
chr3 (2-129)||(3312487-3312615)
chr3 (1-84)||(48854966-48855049)
chr3 (10-111)||(3961729-3961830)
chr3 (65-114)||(4219239-4219288)
chr3 (81-149)||(4817867-4817935)
chr3 (39-149)||(39429494-39429606)
chr3 (1-93)||(40401458-40401550)
chr3 (1-120)||(25135268-25135390)
chr3 (39-96)||(24520714-24520771)
chr3 (86-149)||(54706710-54706774)
[»] chr2 (45 HSPs)
chr2 (1-147)||(4426607-4426753)
chr2 (1-185)||(22597114-22597307)
chr2 (1-147)||(25067878-25068024)
chr2 (1-185)||(9978618-9978811)
chr2 (1-185)||(43474077-43474270)
chr2 (1-149)||(35333529-35333677)
chr2 (1-185)||(5754267-5754460)
chr2 (1-185)||(12704666-12704859)
chr2 (9-185)||(20561089-20561274)
chr2 (1-149)||(32314466-32314614)
chr2 (4-149)||(38535257-38535402)
chr2 (1-149)||(13740609-13740757)
chr2 (9-185)||(7072905-7073090)
chr2 (10-147)||(44942311-44942448)
chr2 (1-141)||(10286956-10287095)
chr2 (9-149)||(31908773-31908913)
chr2 (1-185)||(11937807-11938001)
chr2 (1-138)||(4732106-4732242)
chr2 (17-138)||(13878972-13879092)
chr2 (17-138)||(14019097-14019217)
chr2 (14-147)||(27095731-27095864)
chr2 (1-149)||(36868032-36868180)
chr2 (1-147)||(4604256-4604402)
chr2 (1-149)||(28231046-28231194)
chr2 (9-149)||(18089353-18089489)
chr2 (1-129)||(28261837-28261965)
chr2 (21-149)||(33012101-33012229)
chr2 (1-149)||(34416712-34416858)
chr2 (9-147)||(17268083-17268219)
chr2 (9-120)||(32015277-32015387)
chr2 (13-147)||(4739355-4739489)
chr2 (4-121)||(12891070-12891188)
chr2 (14-185)||(15919853-15920032)
chr2 (1-147)||(34963025-34963161)
chr2 (1-118)||(41797649-41797766)
chr2 (9-137)||(34471002-34471130)
chr2 (1-84)||(29542881-29542964)
chr2 (72-146)||(9689993-9690067)
chr2 (67-147)||(17767566-17767647)
chr2 (10-88)||(19382399-19382477)
chr2 (67-147)||(6431402-6431483)
chr2 (14-130)||(45694414-45694532)
chr2 (69-114)||(17792533-17792578)
chr2 (1-50)||(38384406-38384455)
chr2 (91-147)||(38384481-38384537)
[»] chr7 (46 HSPs)
chr7 (1-149)||(9785341-9785489)
chr7 (1-185)||(46025978-46026171)
chr7 (1-149)||(10094465-10094613)
chr7 (9-149)||(42603726-42603866)
chr7 (1-149)||(21603486-21603632)
chr7 (1-149)||(21990685-21990834)
chr7 (9-149)||(15674569-15674709)
chr7 (1-149)||(32740777-32740924)
chr7 (1-149)||(45457505-45457653)
chr7 (1-138)||(3266423-3266558)
chr7 (1-146)||(45482091-45482236)
chr7 (1-149)||(1281086-1281234)
chr7 (35-147)||(28664895-28665007)
chr7 (1-149)||(42644700-42644844)
chr7 (1-185)||(6667374-6667567)
chr7 (21-149)||(17473692-17473820)
chr7 (21-149)||(17579394-17579522)
chr7 (9-149)||(39532932-39533072)
chr7 (10-149)||(43847094-43847233)
chr7 (1-149)||(10574405-10574553)
chr7 (1-149)||(11833043-11833190)
chr7 (1-149)||(17509153-17509301)
chr7 (1-149)||(17543913-17544061)
chr7 (21-149)||(36579281-36579409)
chr7 (1-185)||(48304342-48304537)
chr7 (1-170)||(9719922-9720095)
chr7 (1-143)||(22747458-22747599)
chr7 (1-147)||(24320172-24320318)
chr7 (17-144)||(41287987-41288114)
chr7 (39-149)||(5684389-5684499)
chr7 (39-149)||(5709439-5709549)
chr7 (39-145)||(32643040-32643146)
chr7 (9-149)||(2622616-2622756)
chr7 (1-118)||(36719501-36719620)
chr7 (9-147)||(4621324-4621462)
chr7 (44-149)||(27535480-27535587)
chr7 (37-115)||(26161038-26161116)
chr7 (1-147)||(21954767-21954914)
chr7 (9-108)||(36252994-36253094)
chr7 (39-146)||(14657808-14657917)
chr7 (9-114)||(9137017-9137121)
chr7 (1-114)||(37375980-37376093)
chr7 (10-97)||(15017334-15017421)
chr7 (14-147)||(39707315-39707442)
chr7 (1-75)||(25112610-25112684)
chr7 (1-53)||(32116531-32116583)
[»] chr5 (41 HSPs)
chr5 (1-149)||(42396461-42396609)
chr5 (1-147)||(17331354-17331500)
chr5 (1-182)||(17699535-17699725)
chr5 (15-143)||(3740387-3740515)
chr5 (9-149)||(34431084-34431224)
chr5 (1-149)||(33164417-33164565)
chr5 (9-149)||(39179785-39179925)
chr5 (17-144)||(17096204-17096331)
chr5 (1-144)||(32347663-32347806)
chr5 (1-185)||(6281023-6281216)
chr5 (9-185)||(28040608-28040793)
chr5 (1-149)||(42609168-42609316)
chr5 (17-147)||(6635276-6635406)
chr5 (9-147)||(18653808-18653946)
chr5 (1-147)||(29097815-29097961)
chr5 (10-143)||(12891706-12891839)
chr5 (1-149)||(20483209-20483358)
chr5 (17-149)||(27241088-27241220)
chr5 (14-147)||(178066-178201)
chr5 (1-120)||(2555299-2555418)
chr5 (1-127)||(11734768-11734892)
chr5 (10-117)||(7771779-7771887)
chr5 (1-147)||(6681825-6681969)
chr5 (35-149)||(12439617-12439731)
chr5 (9-147)||(17687231-17687369)
chr5 (73-149)||(43493896-43493972)
chr5 (10-149)||(23882074-23882213)
chr5 (1-146)||(26295006-26295152)
chr5 (39-147)||(3079292-3079400)
chr5 (1-116)||(23428306-23428424)
chr5 (9-143)||(39531367-39531494)
chr5 (5-129)||(7150860-7150985)
chr5 (39-147)||(981015-981120)
chr5 (1-47)||(9196787-9196833)
chr5 (1-145)||(25961953-25962091)
chr5 (1-130)||(12215177-12215305)
chr5 (1-47)||(14535024-14535070)
chr5 (9-51)||(17732343-17732385)
chr5 (1-114)||(25487667-25487780)
chr5 (66-114)||(26240692-26240740)
chr5 (17-108)||(35275952-35276044)
[»] chr8 (37 HSPs)
chr8 (1-147)||(14600655-14600801)
chr8 (9-147)||(31308174-31308312)
chr8 (9-147)||(41361758-41361896)
chr8 (1-149)||(12329650-12329799)
chr8 (1-185)||(37612632-37612825)
chr8 (1-149)||(10338779-10338927)
chr8 (17-147)||(30026853-30026983)
chr8 (1-134)||(7579812-7579945)
chr8 (1-185)||(24791125-24791318)
chr8 (16-149)||(37128458-37128591)
chr8 (1-185)||(39067646-39067839)
chr8 (1-149)||(2234427-2234575)
chr8 (9-185)||(31407713-31407898)
chr8 (9-180)||(31202442-31202622)
chr8 (1-147)||(4757191-4757337)
chr8 (2-149)||(9501613-9501757)
chr8 (9-144)||(24699861-24699996)
chr8 (1-149)||(1039851-1039998)
chr8 (17-144)||(10147976-10148103)
chr8 (27-147)||(2025192-2025312)
chr8 (1-185)||(1810179-1810369)
chr8 (39-179)||(3204751-3204899)
chr8 (1-137)||(22787528-22787664)
chr8 (14-147)||(11161908-11162041)
chr8 (2-149)||(15288752-15288903)
chr8 (2-149)||(15469121-15469272)
chr8 (1-147)||(2968557-2968704)
chr8 (71-150)||(13570753-13570832)
chr8 (90-147)||(23971140-23971197)
chr8 (10-147)||(32778924-32779054)
chr8 (1-147)||(10334200-10334348)
chr8 (1-111)||(13576151-13576254)
chr8 (1-51)||(18204093-18204143)
chr8 (5-114)||(4429120-4429229)
chr8 (9-147)||(28297072-28297211)
chr8 (1-84)||(19720102-19720181)
chr8 (1-51)||(43937134-43937184)
[»] scaffold1379 (2 HSPs)
scaffold1379 (9-185)||(1043-1228)
scaffold1379 (9-147)||(1-139)
[»] chr6 (24 HSPs)
chr6 (1-147)||(6419807-6419953)
chr6 (9-149)||(14783128-14783268)
chr6 (1-147)||(12481319-12481465)
chr6 (39-185)||(15590066-15590221)
chr6 (17-147)||(19402773-19402903)
chr6 (1-147)||(23654276-23654422)
chr6 (15-149)||(21507771-21507905)
chr6 (1-143)||(31937369-31937510)
chr6 (1-144)||(4921830-4921973)
chr6 (1-149)||(6296198-6296347)
chr6 (1-149)||(6303008-6303157)
chr6 (1-120)||(29927044-29927162)
chr6 (9-147)||(4393796-4393934)
chr6 (1-130)||(31705208-31705337)
chr6 (27-185)||(8693632-8693802)
chr6 (44-147)||(2304802-2304905)
chr6 (17-129)||(23638083-23638195)
chr6 (15-138)||(2488173-2488296)
chr6 (95-149)||(31937574-31937628)
chr6 (1-55)||(13871569-13871623)
chr6 (78-132)||(15057722-15057776)
chr6 (1-98)||(27135188-27135284)
chr6 (1-143)||(35219862-35219995)
chr6 (1-89)||(29284836-29284925)
[»] chr1 (37 HSPs)
chr1 (1-185)||(7995509-7995702)
chr1 (1-146)||(14265311-14265456)
chr1 (1-149)||(44517171-44517319)
chr1 (1-147)||(424240-424386)
chr1 (1-149)||(29205309-29205457)
chr1 (1-149)||(37822294-37822442)
chr1 (1-147)||(27534725-27534869)
chr1 (21-147)||(51418040-51418165)
chr1 (1-149)||(3232812-3232960)
chr1 (1-149)||(42490917-42491065)
chr1 (1-147)||(12871647-12871793)
chr1 (10-147)||(4882317-4882454)
chr1 (1-185)||(45750457-45750650)
chr1 (10-147)||(10627026-10627163)
chr1 (21-149)||(32784132-32784260)
chr1 (1-147)||(13488485-13488631)
chr1 (7-120)||(15791230-15791343)
chr1 (16-149)||(20411597-20411730)
chr1 (1-146)||(29726546-29726690)
chr1 (1-129)||(15391201-15391329)
chr1 (1-147)||(17347624-17347769)
chr1 (4-185)||(28678082-28678272)
chr1 (1-185)||(33486979-33487172)
chr1 (1-118)||(33938962-33939081)
chr1 (17-144)||(45193591-45193718)
chr1 (9-149)||(42276380-42276519)
chr1 (1-147)||(18343640-18343785)
chr1 (1-114)||(13999025-13999138)
chr1 (1-149)||(33125754-33125903)
chr1 (14-78)||(2513565-2513629)
chr1 (5-93)||(29069795-29069883)
chr1 (9-144)||(28399286-28399414)
chr1 (3-93)||(47551177-47551265)
chr1 (72-149)||(4871046-4871123)
chr1 (1-110)||(10782564-10782673)
chr1 (1-47)||(32301464-32301510)
chr1 (10-110)||(24114637-24114737)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-144)||(13194-13337)
[»] scaffold0321 (1 HSPs)
scaffold0321 (3-149)||(7075-7221)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-147)||(6163-6309)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-143)||(404216-404350)
[»] scaffold0056 (1 HSPs)
scaffold0056 (9-185)||(74143-74328)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-147)||(35108-35256)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-138)||(4016-4153)
[»] scaffold1350 (1 HSPs)
scaffold1350 (1-138)||(1609-1746)
[»] scaffold0536 (1 HSPs)
scaffold0536 (17-144)||(2931-3058)
[»] scaffold0432 (1 HSPs)
scaffold0432 (20-147)||(2386-2512)


Alignment Details
Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 39523581 - 39523397
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||| |||||||||||    
T  39523581 taagacgagaaataaaaaacacaccgcacaaagacggaaaatcaaaacaaatagatttgttcagagatgacgaaatcataaaaacaaacgaaagaaaaca 39523482  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaattgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||    
T  39523481 gaaaacatgtgaaatcacttattcaattaggataaaaggaaaaacaattgatttttgggtcaaaattgactctaaatcacccctc 39523397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 394223 - 394416
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||| ||| ||| |||||||| ||    
T  394223 taagacgggaaataaaaaacacatcacacaaaggcgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcatagaaacaaacgaaagaaagca 394322  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||| |||||||||||||| || |||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  394323 gaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 20399852 - 20400000
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||  ||| ||||| |||||||||||||||| ||||||||| |||||||||||    
T  20399852 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaagaagagtcgttcagagacgacgaaatcacaaaaataaacgaaagaaaaca 20399951  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  20399952 gaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaatt 20400000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 477961 - 478153
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||  ||||||||| ||||||||| ||||| |||||    
T  477961 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagaaaacgaaatcacaaaaataaacgaaaggaaaca 478060  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat--------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||| ||||||||| ||||||||||||| ||| |||||||||        ||||||||||||||||||||||  |||||||| ||||    
T  478061 gaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcggatggtgatttttgggtcaaaattgaccataaatcacccctc 478153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 6911844 - 6911706
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||| ||||||| ||||| ||| |||||||||||||||||||    
T  6911844 gaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtttagagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatat 6911745  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| |||||||| | |||||| ||||||||    
T  6911744 gtgaaatcacttattcaattaaggtagaaggaaaaacaa 6911706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29268726 - 29268872
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||||||| ||||| ||| |||||||||||    
T  29268726 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 29268825  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  29268826 gaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaa 29268872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 13965732 - 13965584
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| | ||||||| ||| ||||||||||||  ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  13965732 taagacgggaaataaaaaacacatcgcacaaagacgggaaatcaaaacaatcagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 13965633  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     | ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  13965632 tagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 13965584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 7083768 - 7083913
Alignment:
Q  4 gacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaa 103  Q
    |||| ||||| |||||||||||  |||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||| ||||    
T  7083768 gacgggaaatcaaaaacacaccgtacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaatagaa 7083867  T
Q  104 aatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  7083868 aatatgtgaaatcacttattcaattatgatagaaggaaaaacaatt 7083913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 43244330 - 43244523
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| |||| |||||||| ||| ||||| ||||||||| |||||| ||||| ||| |||||||||      
T  43244330 taagacgggaaatcaaaaacacaccgcacaaagacgggaaattaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaatc 43244429  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  43244430 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctc 43244523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 22757258 - 22757118
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| | |||||||||||||| ||||| ||| |||| |||||| |||||||    
T  22757258 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcatagacgacgaaatcacaaaaacaaacgaaaaaaaacataaaatat 22757159  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  22757158 gtgaaatcacttattcaattaggatagaaggaaaaacaatt 22757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26674544 - 26674396
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||| | | ||||| ||||| |||||||||| ||||| ||| |||||||||||    
T  26674544 taagacgggaaatcaaaaacacaccacacaaagacgggaaatcaaaacaaacaaagtcgttcagagatgacgaaatcacaaaaacaaacgaaagaaaaca 26674445  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| |||||||| |||||||| |||| |||||    
T  26674444 aaaaatatgtgaaatcacttattcaattatgatagaaggaaaagcaatt 26674396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 38944097 - 38944244
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  38944097 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 38944196  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||| || |||||||| ||||||||||    
T  38944197 -aaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaatt 38944244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 43493244 - 43493384
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||| |||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| |||||||||  |||||||||| |||||||    
T  43493244 gaaatcaaaaacgcaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatat 43493343  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| |||||||| |||||||| ||||||||||    
T  43493344 gtgaaatcacttattcaattaagatagaaggaaaaacaatt 43493384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 30202202 - 30202064
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||||||||  |||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  30202202 gaaatcaaaaacacaccgtacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 30202103  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| |||||||| |||| ||| ||||||||    
T  30202102 gtgaaatcacttattcaattaagataaaaggaaaaacaa 30202064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 39837767 - 39837573
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||||||||| | | ||||| | ||| |||||||||| ||||| ||| |||||||||||    
T  39837767 taagacgggaaataaaacacacaccgcacaaagacggaaaatcaaaacaaacaaagtcgttcaaagatgacgaaatcaaaaaaacaaacgaaagaaaaca 39837668  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaa--gaaaaaacaat--------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||||||||||||| ||  ||||||| |||        ||||||||||||||||||||||  |||||||| ||||    
T  39837667 gaaaatatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgacgctaaatcacccctc 39837573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 22049353 - 22049502
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| |||||||||||||||||  |||||||||  ||||||||||||| | | | ||  |||||| |||||| |||||||||||||||||||||||     
T  22049353 taagacgtgaaataaaaaacacaccggacaaaggcgagaaatcaaaacaaacacagttgtgcagagacaacgaaaccataaaaataaatgaaagaaaact 22049452  T
Q  101 gaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  22049453 gaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaatt 22049502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25658339 - 25658191
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||  ||||||||||||| | | ||||| |||||||||||||||| ||||| | | |||||||||||    
T  25658339 taagacggcaaataaaaaacacaccgcacaaagacgtgaaatcaaaacaaacaaagtcgttcagagacgacgaaatcacaaaaacatacgaaagaaaaca 25658240  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| || |||||||| ||||| ||||||||||    
T  25658239 gaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaatt 25658191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 44757000 - 44757184
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||||| ||||||| ||  ||||||||||||| | | || |  |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  44757000 aaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaacaaagtcatgcagagacgacgaaatcataaaaacaaacgaaagaaaacataaaatatg 44757099  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaa---------ttgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||||||||| ||||||||||||||||| ||||||||          |||||||||||||||||||||| ||||||||| ||||    
T  44757100 tgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgaccttaaatcacccctc 44757184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 50801389 - 50801241
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||  ||||||| ||  ||||||| |||  |||||||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||    
T  50801389 taagacgggaaaccaaaaacaaactgcacaaagacggggaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaataaacgaaagaaaaca 50801290  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  50801289 gaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataatt 50801241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24825821 - 24825675
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||| ||||||| ||||||| ||| ||||||||||||| ||| ||||  | |||||||||||||| ||||| ||| ||||||||| |    
T  24825821 taagacggaaaatcaaatacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtgcaaagacgacgaaatcacaaaaacaaacgaaagaaaata 24825722  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  24825721 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 24825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19745561 - 19745413
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaat-aaatgaaagaaaac 99  Q
    ||||||| ||||||||||||||||| ||||||| || ||| |||||||||| ||| ||||| ||||||||| |||||| |||||  ||| ||||||||||    
T  19745561 taagacgggaaataaaaaacacaccgcacaaagacgcaaa-tcaaaacaaacagagtcgttcagagacgactaaatcacaaaaaacaaacgaaagaaaac 19745463  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||| || ||||||||||||| ||| ||||||||||    
T  19745462 agaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaatt 19745413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 19794245 - 19794393
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaat-aaatgaaagaaaac 99  Q
    ||||||| ||||||||||||||||| ||||||| || ||| |||||||||| ||| ||||| ||||||||| |||||| |||||  ||| ||||||||||    
T  19794245 taagacgggaaataaaaaacacaccgcacaaagacgcaaa-tcaaaacaaacagagtcgttcagagacgactaaatcacaaaaaacaaacgaaagaaaac 19794343  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||| || ||||||||||||| ||| ||||||||||    
T  19794344 agaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaatt 19794393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24611748 - 24611885
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| ||||||||| | ||||||| || |||||||||||||| ||| ||||| ||||||| |||||||| ||||  ||| |||| |||| |    
T  24611748 taagacgagaaatgaaaaacacaacgcacaaagacgaaaaatcaaaacaaacagagtcgttcagagacgtcgaaatcacaaaagcaaacgaaaaaaaata 24611847  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24611848 gaaaatatgtgaaatcacttattcaattaggatagaag 24611885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7060495 - 7060348
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||| | | ||  ||||||||| ||| ||| ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  7060495 taagacgggaaataaaaaacacaccgcacga-gacgagaaatcaaaagaaacagagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 7060397  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  7060396 taaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 7060348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 7861155 - 7861302
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||| | ||| ||| ||| |||| ||||||| |||| ||||| |||||||||||||||| ||||| |||||||| ||||||    
T  7861155 taagacgggaaatcaaaaacacatcgcacgaagacgggaaattaaaacaagtagagtcgttcagagacgacgaaatcacaaaaacaaatgaaa-aaaaca 7861253  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| || |||||||||||||| ||||| ||||    
T  7861254 gaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataatt 7861302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8712702 - 8712554
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||| | ||||||||||| ||||||| ||| ||||||||||||| ||| || || ||||| |||||||||| ||||| ||| |||||||||||    
T  8712702 taagacgggaactcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcattcagagatgacgaaatcacaaaaacaaacgaaagaaaaca 8712603  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     |||||||||||||||||||  |||| ||||||||||| ||||||||||    
T  8712602 aaaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaatt 8712554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 24568662 - 24568810
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||| |||||||||||||  || ||||| ||| |||||||||||| ||||| ||| |||| ||||||    
T  24568662 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacggagtcgttcagatacgacgaaatcacaaaaacaaacgaaataaaaca 24568761  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    || ||||||| ||||||||| ||||||||||||||||| ||||| ||||    
T  24568762 gataatatgtaaaatcacttattcaattaggatagaaggaaaaataatt 24568810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6882128 - 6881985
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||| | || |||| ||| ||||||||||||| |||   ||| |||||||||||||||| ||||| ||| |||||||||||    
T  6882128 taagacggaaaataaaaaacacaacgcaaaaagacgggaaatcaaaacaaacagagatgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 6882029  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    |||||||||||||||||||| || |||||||||||||| |||||    
T  6882028 gaaaatatgtgaaatcacttatttaattaggatagaaggaaaaa 6881985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 20887705 - 20887889
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||| ||    
T  20887705 taagacgggaaataaaaaacacactgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaagca 20887804  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaat 177  Q
    ||||| |||||||||||||| || ||||| ||||||| ||| || |||         |||||||||||||||||||||| ||||||    
T  20887805 gaaaa-atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgaccttaaat 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11210262 - 11210390
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||| | ||||||||||  ||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||| |    
T  11210262 taagacgggaactcaaaaacacactgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaga 11210361  T
Q  101 gaaaatatgtgaaatcacttgttcaatta 129  Q
    | |||||||||||||||||| ||||||||    
T  11210362 gtaaatatgtgaaatcacttattcaatta 11210390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 26742412 - 26742560
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| |||| |||||| ||||||| ||| ||||||||||| | ||| ||||| | ||||||| ||||||  |||| ||| |||||||||||    
T  26742412 taagacgggaaatcaaaatcacaccgcacaaagacgggaaatcaaaacatacagagtcgttcaaagacgacaaaatcacgaaaacaaacgaaagaaaaca 26742511  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| |||||||| |||||||  ||||||||||    
T  26742512 gaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaatt 26742560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 51152288 - 51152149
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| |||||||||||||  || ||||| ||||| |||||||||| ||||  ||| |||||||| ||||||||||    
T  51152288 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacggagtcgttcagagatgacgaaatcacaaaac-aaacgaaagaaagcagaaaatat 51152190  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  51152189 gtgaaatcacttattaaattaggatagaaggaaaaacaatt 51152149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12717066 - 12717213
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||| ||||||| ||  ||||||||||||||||| ||||   ||||||| ||||||| ||||| ||| ||||||||||     
T  12717066 taagacggaaaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaatagagtcgtgctgagacgaagaaatcacaaaaacaaacgaaagaaaact 12717165  T
Q  101 gaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||| |||||||||| || |||||||||||||||||||||||    
T  12717166 gaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaa 12717213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13586189 - 13586362
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaa-c 99  Q
    |||||||  |||| ||| |||||| |||| ||| ||| ||||||||||||| ||| ||||| ||||| |||||||||| ||||| ||| |||| |||| |    
T  13586189 taagacggaaaatcaaacacacacaacacgaagacgggaaatcaaaacaaacagagtcgttcagagatgacgaaatcacaaaaacaaacgaaaaaaaaac 13586288  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt---gatttttgggtcaaaattgac 170  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||    ||||||| ||||||||||||    
T  13586289 agaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaatttttgagtcaaaattgac 13586362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 5814518 - 5814373
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||| ||||||||||||||||||| || | ||| ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| ||||||||||     
T  5814518 taagacgaaaaataaaaaacacaccaca-aaggacgggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaact 5814420  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     |||||||||||||| |||| |||||||| ||||||||  |||||||    
T  5814419 aaaaatatgtgaaataacttattcaattaagatagaagggaaaacaa 5814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 45351027 - 45351169
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  45351027 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatat 45351126  T
Q  109 gtgaaatcacttgttc-aattaggatagaa-gaaaaaacaatt 149  Q
    |||||||||||| ||| |||||| ||| || ||||||||||||    
T  45351127 gtgaaatcacttattcaaattagaataaaaggaaaaaacaatt 45351169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 45360506 - 45360648
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  45360506 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatat 45360605  T
Q  109 gtgaaatcacttgttc-aattaggatagaa-gaaaaaacaatt 149  Q
    |||||||||||| ||| |||||| ||| || ||||||||||||    
T  45360606 gtgaaatcacttattcaaattagaataaaaggaaaaaacaatt 45360648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 8517405 - 8517542
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||| ||||||| || |||| ||  ||||||||||||| | | ||||| ||||||| |||||||| ||||| ||| |||||||||||    
T  8517405 taagacgggaaataaaacacacacctcataaagacgagaaatcaaaacaaacaaagtcgttcagagacggcgaaatcacaaaaacaaacgaaagaaaaca 8517504  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||||||||| ||||||||| ||||||||| |||||||    
T  8517505 gaaaatatgtaaaatcacttattcaattagaatagaag 8517542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2447972 - 2447824
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| || |||||||||||||| ||||||  ||| ||||||||||||| ||| ||||| | |||||| ||||||| ||||| |||  || |||||||    
T  2447972 taagacgggatataaaaaacacaccgcacaaaaacgggaaatcaaaacaaacagagtcgttcaaagacgaagaaatcacaaaaacaaactaatgaaaaca 2447873  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||| ||||||||||||||| |||||||||||||||| |||||| ||||    
T  2447872 taaattatgtgaaatcacttattcaattaggatagaaaaaaaaataatt 2447824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 626512 - 626639
Alignment:
Q  15 aaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    ||||||||||| ||||||| ||  ||||||||||||  ||| ||||| | ||| |||||||||| ||||| ||| |||||||||||||||||||||| ||    
T  626512 aaaaacacaccgcacaaagacgagaaatcaaaacaatcagagtcgttcacagaggacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aa 626610  T
Q  115 tcacttgttcaattaggatagaagaaaaa 143  Q
    |||||| |||||||| |||||||||||||    
T  626611 tcacttattcaattatgatagaagaaaaa 626639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 29922993 - 29922873
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||  ||||||||||||| ||| ||||| ||||||||| |||||| ||||| | | ||||| ||| |||||||||||||||||    
T  29922993 aaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacagacgaaaggaaatagaaaatatgtgaaatc 29922894  T
Q  117 acttgttcaattaggatagaa 137  Q
    |||| ||||||||||||||||    
T  29922893 acttattcaattaggatagaa 29922873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24100312 - 24100163
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||| ||||||||| ||||||| |||||| ||  |||| |||||||| ||| ||||| | ||||||||||||   ||||| ||| |||||||||||    
T  24100312 taagacgaaaaataaaaa-cacaccatacaaagacgagaaattaaaacaaacagagtcgttcacagacgacgaaattgcaaaaacaaacgaaagaaaaca 24100214  T
Q  101 ga--aaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||  |||||||||||||||||| |||||||| |||||||| ||||||||||    
T  24100213 gagaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaatt 24100163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 27395002 - 27394814
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| | ||| ||||||||||| ||| |||  || ||||||||||||  | | ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  27395002 taagacggggaatcaaaaacacaccgcacgaagaagggaaatcaaaacaatcaaagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 27394903  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcac 180  Q
     ||||||| | |||| |||| ||||||||||||||||| ||||| |||         ||||||||||||||||||||||  ||||||||    
T  27394902 taaaatattttaaattacttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcac 27394814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36124297 - 36124445
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaata-gattcgtttagagacgacgaaatcataaaaataaatgaaagaaaac 99  Q
    ||||||| ||||||||||| ||||  ||||||  |||||||||||||||||   || ||||| |||||||||||||||| ||||| ||| ||||||||||    
T  36124297 taagacgggaaataaaaaatacactgcacaaaaacggaaaatcaaaacaaaactgagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaac 36124396  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaattg 150  Q
      |||||||||||||||| |  |||||||| ||||| || |||||||||||    
T  36124397 --aaaatatgtgaaatcaatcattcaattaagataggaggaaaaacaattg 36124445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 28837228 - 28837128
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||||||||||||| ||| ||||||||||||| ||  ||||  |||||||||||||||| ||||| ||| |||| |||||||||||||||    
T  28837228 aaatcaaaaacacaccacacaaagacgggaaatcaaaacaaacagcgtcgtgcagagacgacgaaatcacaaaaacaaacgaaaaaaaacagaaaatatg 28837129  T
Q  110 t 110  Q
    |    
T  28837128 t 28837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 42197725 - 42197576
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatg--aaagaaaa 98  Q
    ||||||| ||||  ||||| ||||| ||||||| |||||| |||||||||| ||| || || |||||||||||||||| ||||| |||||  ||| ||||    
T  42197725 taagacgggaaaataaaaatacaccgcacaaagacggaaa-tcaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaaatgaaaaaaaaaa 42197627  T
Q  99 cagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    || |||||| ||||| |||||| || |||||||||||||| ||||| ||||    
T  42197626 caaaaaatacgtgaagtcacttattaaattaggatagaaggaaaaataatt 42197576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 27090882 - 27090759
Alignment:
Q  15 aaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgt-gaa 113  Q
    ||||||||||||||||||| ||||||||||||||||| | | ||||  |||||| ||||||| |  |||| ||| |||||||||  ||||||| || |||    
T  27090882 aaaaacacaccacacaaagacggaaaatcaaaacaaacatagtcgtgcagagacaacgaaatta-caaaacaaacgaaagaaaaatgaaaatacgtggaa 27090784  T
Q  114 atcacttgttcaattaggatagaag 138  Q
    ||||||| ||| |||||||||||||    
T  27090783 atcacttattcgattaggatagaag 27090759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 31522064 - 31522006
Alignment:
Q  91 aaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  31522064 aaagaaaacaaagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 31522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 32616830 - 32616889
Alignment:
Q  57 tcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||| ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  32616830 tcgttaagagatgacgaaatcacaaaaataaacgaaataaaacagaaaatatgtgaaatc 32616889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31522118 - 31522067
Alignment:
Q  1 taagacgagaaataaaaaa-cacaccacacaaaggcggaaaatcaaaacaaa 51  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  31522118 taagacgagaaataaaaaaacacaccgcacaaagacggaaaatcaaaacaaa 31522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 56236771 - 56236821
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaa 51  Q
    ||||||| ||||| ||||||||||| ||||| | |||||||||||||||||    
T  56236771 taagacgggaaatcaaaaacacaccgcacaacgacggaaaatcaaaacaaa 56236821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 3159136 - 3159068
Alignment:
Q  80 aaaaataaatgaaagaaaacagaaaatatgtg-aaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||| ||| |||||||| | ||||||||||| ||||||||| || ||||| |||||||| ||||||||    
T  3159136 aaaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttatttaattatgatagaaggaaaaacaa 3159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11819255 - 11819109
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||    
T  11819255 taagacgggaaataaaaaacacaccgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaaca 11819156  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||||||||||||||||| |||||||| | |||||| ||||||||    
T  11819155 taaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 11819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 48652397 - 48652543
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| | | |||||||||||||||||||||| ||||| ||| |||||||||||    
T  48652397 taagacgggaaataaaaaacacaccgcacaaagacggaaaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaacaaacgaaagaaaaca 48652496  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||    
T  48652497 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 48652543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 14585634 - 14585441
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||| ||||||| ||||| |||  ||||||||||    
T  14585634 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgaggaaatcacaaaaacaaacaaaagaaaaca 14585535  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||| |||||||| ||||    
T  14585534 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctc 14585441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 31462712 - 31462896
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||| |||  |||||||||||||||||||    
T  31462712 aaataaaaaacacaccgcacaaagtcggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatg 31462811  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    | ||||||||| ||||||||||||| ||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  31462812 taaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctc 31462896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 41868277 - 41868394
Alignment:
Q  27 cacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaa 126  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||| |||||    
T  41868277 cacaaagacggaaaatcaaaacaaatagagtcgtttagagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaa 41868376  T
Q  127 ttaggatagaagaaaaaa 144  Q
    |||||||||||| |||||    
T  41868377 ttaggatagaaggaaaaa 41868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 31270498 - 31270350
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||| | ||||| ||| |||||||||||    
T  31270498 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaattacaaaaacaaacgaaagaaaaca 31270399  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  31270398 taaaatatgtgaaatcacttattcaattaggatagaaggaaaaataatt 31270350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3457111 - 3456967
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| |||||||||    |||| |||||||||||||||||||||| ||||| ||| |||||||||||    
T  3457111 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaa----tagagtcgtttagagacgacgaaatcacaaaaacaaaggaaagaaaaca 3457016  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  3457015 aaaaatatgttaaatcacttattcaattaggatagaaggaaaaacaatt 3456967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 33637575 - 33637429
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||||||||    
T  33637575 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaataaacgaaagaaaaca 33637476  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||||||||  || |||||||| | |||||| ||||||||    
T  33637475 gaaaatatgtgaaatcttttattcaattaaggtagaaggaaaaacaa 33637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 54238975 - 54239123
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||||| | | ||||| |  ||||||||||||| ||||| ||| |||||||||||    
T  54238975 taagacgggaaatcaaaaacacaccgcacaaacacgggaaatcaaaacaaacaaagtcgttcatcgacgacgaaatcacaaaaacaaacgaaagaaaaca 54239074  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  54239075 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 54239123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22485137 - 22484990
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| | ||| |||||||||| ||||| ||| |||||||||||    
T  22485137 taagacggaaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcaaagatgacgaaatcacaaaaacaaacgaaagaaaaca 22485038  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat 148  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  22485037 gaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaat 22484990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36691756 - 36691899
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| || |||| ||| ||||||||||||| | | ||||| |||||||||||||||| ||||| ||| ||||| |||||    
T  36691756 taagacggaaaataaaaaacacaccgcataaagacgggaaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaaggaaaca 36691855  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  36691856 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaa 36691899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 35174838 - 35174728
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  35174838 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaag 35174739  T
Q  139 aaaaaacaatt 149  Q
     ||||||||||    
T  35174738 gaaaaacaatt 35174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 38527409 - 38527287
Alignment:
Q  27 cacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaa 126  Q
    ||||||| ||| ||||||||||||| ||| || || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||    
T  38527409 cacaaagacgggaaatcaaaacaaacagagtcattcagagacgacgaaatcataaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaa 38527310  T
Q  127 ttaggatagaagaaaaaacaatt 149  Q
    ||| |||||||| ||||||||||    
T  38527309 ttaagatagaaggaaaaacaatt 38527287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40883823 - 40883974
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagat--tcgtttagagacgacgaaatcataaaaataaatgaaagaaaa 98  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| |||   ||||| ||| |||||||||||| ||||| ||| |||||||||    
T  40883823 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagagtcgttcagaaacgacgaaatcacaaaaacaaacgaaagaaaa 40883922  T
Q  99 cagaaaatatgtgaaatcacttgttcaattaggatagaa-gaaaaaacaatt 149  Q
    ||||||||| |||||||||||| ||||||||||||| || ||||||||||||    
T  40883923 cagaaaataagtgaaatcacttattcaattaggataaaaggaaaaaacaatt 40883974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30156238 - 30156381
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaa-taaatgaaagaaaac 99  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| | | ||||| ||||| ||||||||||||||||  ||| |||||||| |    
T  30156238 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcagagaagacgaaatcataaaaacaaaacgaaagaaatc 30156337  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    | ||||||||||||||||||| ||||||||||||| ||| ||||    
T  30156338 ataaaatatgtgaaatcacttattcaattaggataaaaggaaaa 30156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 32080714 - 32080857
Alignment:
Q  4 gacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaa 103  Q
    |||||||||| ||||||||||  ||||||| ||  ||||||||||||| ||| ||||| ||||||||| |||||| ||||| ||| ||||||||||||||    
T  32080714 gacgagaaatcaaaaacacactgcacaaagacgtgaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaa 32080813  T
Q  104 aatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||||||| | |||||||| | |||||| ||||||||    
T  32080814 aatatgtgaaatcacctattcaattaaggtagaaggaaaaacaa 32080857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 55090548 - 55090686
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| | | ||||||||||||| | | ||||| |||||||||| ||||| ||||| |||||||||||||||||||||||    
T  55090548 gaaatcaaaaacacaccgcacaaagacaggaaatcaaaacaaacaaagtcgttcagagacgacggaatcacaaaaacaaatgaaagaaaacagaaaatat 55090647  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| || ||||| | |||||| ||||||||    
T  55090648 gtgaaatcacttatttaattaaggtagaaggaaaaacaa 55090686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 40013237 - 40013380
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| | ||||| ||| |||||||||||||  || | ||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  40013237 gaaatcaaaaacacaccgcgcaaagacggtaaatcaaaacaaacggagttgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 40013336  T
Q  109 gtgaaatcacttgttcaatt---aggatagaagaaaaaacaatt 149  Q
    |||||||||||| |||||||   |||||||||| ||||||||||    
T  40013337 gtgaaatcacttattcaattaggaggatagaaggaaaaacaatt 40013380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 2147898 - 2147762
Alignment:
Q  2 aagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacag 101  Q
    |||||||||||| ||||||||||  | ||||| ||  ||||||||||||| ||| ||||  |||||||||||||||| ||||| |||||||||||||| |    
T  2147898 aagacgagaaatcaaaaacacactgctcaaagacgagaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaatgaaagaaaactg 2147799  T
Q  102 aaaatatgt-gaaatcacttgttcaattaggatagaa 137  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  2147798 aaaatatgtggaaatcacttattcaattaggatagaa 2147762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36624652 - 36624799
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||| ||||  ||||||| ||| ||||||||||||  ||| ||||| |||||||||||||||| ||||| |||  ||||||||||    
T  36624652 taagacgggaaatcaaaaagacactgcacaaagacgggaaatcaaaacaac-agagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaaca 36624750  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| || | |||||||||||| ||||||||||    
T  36624751 gaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaatt 36624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 24483645 - 24483783
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    ||||||||||||||||  ||||||  ||||||||||| |||| ||| ||||| ||||||||| |||||| ||||| ||||| | ||||||||||||||||    
T  24483645 aaataaaaaacacaccgtacaaagatggaaaatcaaa-caaacagagtcgttcagagacgacaaaatcacaaaaacaaatgtatgaaaacagaaaatatg 24483743  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||| |||||||| |||||||  ||||||||||    
T  24483744 tgaaatcacttattcaattatgatagaatgaaaaacaatt 24483783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 19645355 - 19645245
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||||| ||| ||||| |||||||||| ||||| ||||| ||| |||| |||||||||||||||||||||||||| || |||||||| |||||    
T  19645355 aaatcaaaacaaacagagtcgttcagagacgacgtaatcacaaaaacaaaggaaaaaaaacagaaaatatgtgaaatcacttatttaattaggacagaag 19645256  T
Q  139 aaaaaacaatt 149  Q
    |||||||||||    
T  19645255 aaaaaacaatt 19645245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 53155387 - 53155580
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| |||||| |||||||||||| ||| |||| |||||||| ||| ||||| | | |||||||||| | ||||| ||| |||||||||||    
T  53155387 taagacggaaaatcaaaaacgcaccacacaaagacgggaaattaaaacaaacagagtcgttcaaatacgacgaaattacaaaaacaaacgaaagaaaaca 53155486  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||||||||||||||| || |||||||||| ||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  53155487 taaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcacccctc 53155580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 49628052 - 49628192
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| || |||| ||||||||||||||||| | |        ||||||||||||||| ||||| ||| |||||||||||    
T  49628052 taagacgggaaatcaaaaacacaccgcataaagacggaaaatcaaaacaaacaaa--------gagacgacgaaatcacaaaaacaaacgaaagaaaaca 49628143  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  49628144 aaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatt 49628192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1074851 - 1074996
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||||||||||||| ||| ||| ||||| ||||||||| ||||||  |||| ||| |||||||||||    
T  1074851 taagacgggaaatcaaaaacacaccgcacaaagacggaaaatcaaaagaaacagagtcgttaagagacgacaaaatcacgaaaacaaacgaaagaaaaca 1074950  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||  |||| |||||||| ||||||||| ||| ||| ||||||||    
T  1074951 gaaaacgtgtg-aatcacttattcaattagaatataaggaaaaacaa 1074996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 39610382 - 39610247
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| |||  |||||| ||||||| ||| ||||||||||||| ||| || || | ||||||| |||||| ||||| ||| ||||| |||||    
T  39610382 taagacgagaaatcaaa--cacaccgcacaaagacgggaaatcaaaacaaacagagtcattcaaagacgacaaaatcacaaaaacaaacgaaaggaaaca 39610285  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
     ||||||||||||||||||| |||||||||||||||||    
T  39610284 aaaaatatgtgaaatcacttattcaattaggatagaag 39610247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 19861244 - 19861365
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatg-aaagaaaacagaaaata 107  Q
    ||||||||||||||||||||||||| ||   |||||||||||| ||| ||||| |||||||||||||||| ||||| ||| | ||| ||||||| |||||    
T  19861244 gaaataaaaaacacaccacacaaagacgaggaatcaaaacaaacagagtcgttaagagacgacgaaatcacaaaaacaaacgaaaaaaaaacaggaaata 19861343  T
Q  108 tgtgaaatcacttgttcaatta 129  Q
    ||||||||||||| ||||||||    
T  19861344 tgtgaaatcacttattcaatta 19861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 55455030 - 55454922
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| |||||||  || ||||||||||||| ||| ||||||||||||||||| |||| ||||| ||| ||||||||| | |||||||    
T  55455030 gaaataaaaaacacaccgcacaaagaagggaaatcaaaacaaacagagtcgtttagagacgacgatatcacaaaaacaaacgaaagaaaataaaaaatat 55454931  T
Q  109 gtgaaatca 117  Q
    |||||||||    
T  55454930 gtgaaatca 55454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 105992 - 106139
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||||||| ||| ||| ||||  ||||||||| |||||| ||||| ||| ||||||||||     
T  105992 taagacgggaaataaaaaacacatcgcacaaagacggaaaatcaaaataaacagagtcgtgcagagacgacaaaatcacaaaaacaaacgaaagaaaact 106091  T
Q  101 gaaaatatgtg-aaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     |||||||||| ||||||||| || ||||||| |||||  ||||||||    
T  106092 aaaaatatgtgaaaatcacttatttaattagggtagaatgaaaaacaa 106139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 13701967 - 13702065
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaa 137  Q
    ||||||||||||| ||| | ||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  13701967 aaatcaaaacaaacagagttgttcaatgacgacgaaatcacaaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 13702065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 34960879 - 34960963
Alignment:
Q  65 agacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||| ||||||| ||||| ||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34960879 agacgatgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaatt 34960963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 48401009 - 48400878
Alignment:
Q  63 agagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatt 153  Q
    |||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| || || |||| |||||| |||||||||         |||||    
T  48401009 agagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatt 48400910  T
Q  154 tttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||  |||||||| ||||    
T  48400909 tttgggtcaaaattgaccctaaatcacccctc 48400878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 4206471 - 4206616
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||| ||||||| ||||||||||| ||||||| | | |||| |||| ||| ||  ||||| |||||||||||||||| ||||| |||  |||||||| |    
T  4206471 taagatgagaaatcaaaaacacaccgcacaaagacaggaaataaaaa-aaacag--tcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaata 4206567  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||| ||||| ||||||||||||| | | ||||||||||    
T  4206568 aaaaatatgtgaaaacacttattcaattaggatatatggaaaaacaatt 4206616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 34103739 - 34103802
Alignment:
Q  66 gacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaatta 129  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  34103739 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 34103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 53402793 - 53402612
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||| | ||||||| ||| ||||||||||||| | | ||||| |||||||| ||||||| ||||| ||| |||||||| ||    
T  53402793 taagacgggaaatcaaaaacacatcgcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaagca 53402694  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactc 182  Q
    ||         ||||||||| || |||||| ||||||| |||||||||         |||||||||||||||||||||| |||||||||||    
T  53402693 ga---------aaatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcactc 53402612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 27189414 - 27189499
Alignment:
Q  65 agacgacgaaatcataaaaataaatgaaagaaaa-cagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||| ||||||| ||||| |||||||| |||| |||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  27189414 agacgatgaaatcacaaaaacaaatgaaaaaaaaacagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaatt 27189499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 3312615 - 3312487
Alignment:
Q  2 aagacgagaaat-aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||||||| |||||| ||||||||||||| | | ||||||||| |||  || ||||  ||||| || ||||| | ||||| ||| ||||||||||     
T  3312615 aagacgagaaattaaaaaaaacaccacacaaagactggaaatcaaaagaaactgagtcgtgcagagatgatgaaataacaaaaacaaacgaaagaaaact 3312516  T
Q  101 gaaaatatgtgaaatcacttgttcaatta 129  Q
     ||||||||||||||||||| ||||||||    
T  3312515 taaaatatgtgaaatcacttattcaatta 3312487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48855049 - 48854966
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaa 84  Q
    |||||||  ||||||||||| |||| ||||||| ||||||||||||||| | ||| ||||| ||||||||||| |||| |||||    
T  48855049 taagacggaaaataaaaaacgcaccgcacaaagacggaaaatcaaaacatacagagtcgttcagagacgacgatatcacaaaaa 48854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 3961729 - 3961830
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||| ||||||||| ||  ||||||||||||| ||| ||||  | | |||||| ||||||||||| ||| |||| || || |||||||||    
T  3961729 aaataaaaaacacatcacacaaagacgataaatcaaaacaaacagagtcgtacaaaaacgacgtaatcataaaaacaaacgaaataatactgaaaatatg 3961828  T
Q  110 tg 111  Q
    ||    
T  3961829 tg 3961830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 4219288 - 4219239
Alignment:
Q  65 agacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  4219288 agacgacgaaatcataaaaacaaacgaaagaaaactgaaaatatgtgaaa 4219239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 4817867 - 4817935
Alignment:
Q  81 aaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||| ||| ||||||||| ||||||||||||||||||| | ||||||||||||| ||  ||||||||||    
T  4817867 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacctattcaattaggataaaaagaaaaacaatt 4817935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 39429494 - 39429606
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacag-aaaatatgt-gaaatcacttgttcaattaggataga 136  Q
    |||| |||||||| ||| ||||  |||||||||||||||| ||||| ||| ||||||| || | |||| |||| |||| ||||||||||||||| | |||    
T  39429494 aaattaaaacaaacagagtcgtgcagagacgacgaaatcaaaaaaacaaacgaaagaagactgaaaaacatgtggaaagcacttgttcaattagaaaaga 39429593  T
Q  137 agaaaaaacaatt 149  Q
    || ||||||||||    
T  39429594 aggaaaaacaatt 39429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40401458 - 40401550
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaa 93  Q
    |||||||  ||||||||||||||||  |||||| ||  |||| ||| |||| | | ||||||| |||| ||||||||||||||||||| ||||    
T  40401458 taagacggaaaataaaaaacacaccgtacaaagacgagaaattaaatcaaacaaagtcgtttaaagactacgaaatcataaaaataaacgaaa 40401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25135268 - 25135390
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattc--gtttagagacgacgaaatcataaaaataaatgaaagaaaa 98  Q
    ||||| || |||||||||||||| |||||||||  |  ||||||||||||||||||||  |   | |||||||||||||| |||||| || |||| ||||    
T  25135268 taagatgaaaaataaaaaacacatcacacaaagatgagaaatcaaaacaaatagattcatgaaaaaagacgacgaaatcacaaaaatcaacgaaataaaa 25135367  T
Q  99 cagaaaatatg-tgaaatcactt 120  Q
    | ||||  ||| |||||||||||    
T  25135368 cggaaagcatgttgaaatcactt 25135390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 24520771 - 24520714
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaa 96  Q
    ||||||||| ||||||| ||||  | |||||||||||||| ||||||||| |||||||    
T  24520771 aaatcaaaataaatagagtcgtccaaagacgacgaaatcacaaaaataaacgaaagaa 24520714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 54706710 - 54706774
Alignment:
Q  86 aaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattagg-atagaagaaaaaacaatt 149  Q
    |||| |||||||| ||||||||||||||||||||| || |||| || ||| ||| ||||||||||    
T  54706710 aaattaaagaaaatagaaaatatgtgaaatcacttattgaattgggaataaaaggaaaaacaatt 54706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4426607 - 4426753
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||||||||||||||||  |||  ||||||||||||||||||||| ||||| |||||||||||||||    
T  4426607 taagacgggaaatcaaaaacacaccgcacaaagacggaaaatcaaaacaagcagagacgtttagagacgacgaaatcaaaaaaacaaatgaaagaaaaca 4426706  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||    
T  4426707 gaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaa 4426753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 22597307 - 22597114
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| | ||||||||||||||| ||| ||||| ||||||||| |||||||||||| ||| |||||||||||    
T  22597307 taagacgggaaataaaaaacacaccgcacaaagacagaaaatcaaaacaaacagagtcgttcagagacgacaaaatcataaaaacaaacgaaagaaaaca 22597208  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa---------ttgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||||||||||||||| || |||||||||||||| ||||||||          |||||||||||||||||||||| ||||||||| ||||    
T  22597207 aaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctc 22597114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25068024 - 25067878
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  25068024 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaagaaacgaaagaaaaca 25067925  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||  ||||||| ||||||||    
T  25067924 gaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaa 25067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 9978618 - 9978811
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  9978618 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 9978717  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||||||||||||||| || |||||||| |||| ||| |||||||||         |||||||||||||||||||||| ||||||||| ||||    
T  9978718 gaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctc 9978811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 43474077 - 43474270
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| |||||||||||  |||||| ||| ||||||||||||||||| || || |||||||||||||||| ||||| ||| |||||||||||    
T  43474077 taagacgggaaatcaaaaacacaccgtacaaagacggtaaatcaaaacaaatagagtcattcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 43474176  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  43474177 gaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctc 43474270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 35333677 - 35333529
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||  ||||||| ||| ||||||||||||| ||| ||||| ||| |||||||||||| ||||||||| |||||||||||    
T  35333677 taagacggaaaataaaaaacacactgcacaaagacgggaaatcaaaacaaacagagtcgttcagaaacgacgaaatcacaaaaataaacgaaagaaaaca 35333578  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  35333577 gaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaatt 35333529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 5754460 - 5754267
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||| ||||||||| ||| ||||| | |||||||||||||| ||||| |||||||||||||||    
T  5754460 taagacgagaaatcaaaaacacaccgcacaaagacgggaaaacaaaacaaacagagtcgttcatagacgacgaaatcacaaaaacaaatgaaagaaaaca 5754361  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     |||||||||||||||| || ||||| ||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  5754360 aaaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcacccctc 5754267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 12704859 - 12704666
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||||||||||| | | ||||| ||||||||| |||||| ||||| ||| |||||||||||    
T  12704859 taagacgggaaataaaaaacacactgcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaaca 12704760  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  12704759 gaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctc 12704666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 20561089 - 20561274
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||  ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  20561089 gaaataaaaaacacactgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 20561188  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||| ||||| ||| ||| ||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  20561189 gtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 20561274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 32314614 - 32314466
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaataga-ttcgtttagagacgacgaaatcataaaaataaatgaaagaaaac 99  Q
    ||||||| ||||||||||||||||| ||||||| ||  ||||||||||||| ||| |||||  ||||||||| |||||| ||||| ||| ||||||||||    
T  32314614 taagacgggaaataaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagttcgtc-agagacgacaaaatcacaaaaacaaacgaaagaaaac 32314516  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  32314515 agaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaatt 32314466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 38535257 - 38535402
Alignment:
Q  4 gacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaa 103  Q
    |||| ||||||||||||||||| ||||||| ||| |||| |||| ||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  38535257 gacgggaaataaaaaacacaccgcacaaagacgggaaataaaaataaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaa 38535356  T
Q  104 aatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||||||||| |||||||| |||||||| ||||| ||||    
T  38535357 aatatgtgaaatcacttattcaattatgatagaaggaaaaaaaatt 38535402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13740609 - 13740757
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||| |||  ||||||||||| ||||||| ||||||||||||||||| | | |||||  |||| |||||||||| ||||| ||| |||||||||||    
T  13740609 taagacgaaaaagcaaaaacacaccgcacaaagacggaaaatcaaaacaaacaaagtcgttcggagatgacgaaatcacaaaaacaaacgaaagaaaaca 13740708  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  13740709 gaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaatt 13740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 7072905 - 7073090
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||| ||||||| ||||| ||| ||||||||||||||||| |    
T  7072905 gaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaattt 7073004  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt---------gatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||| | |||| ||||||||||||||||| |||| |||||         |||||||||||||||||||||  |||||||| ||||    
T  7073005 gtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctc 7073090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 44942448 - 44942311
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||||| ||||||| ||| ||||||| ||||| ||| | ||| | |||||||||||||| ||||| |||  |||||||||| ||||||||    
T  44942448 aaataaaaaacacaccgcacaaagacgggaaatcaagacaaacagagtagttcaaagacgacgaaatcacaaaaacaaacaaaagaaaacataaaatatg 44942349  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  44942348 tgaaatcacttattcaattaggatagaagaaaaaacaa 44942311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 10286956 - 10287095
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| |||||||| |||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  10286956 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaa-caaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 10287054  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaa 141  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  10287055 gaaaatatgtgaaatcacttattcaattaggataaaagaaa 10287095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 31908773 - 31908913
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||| ||||| ||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||||||||||    
T  31908773 gaaatcaaaaatacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcagaaaaacaaacgaaagaaaacagaaaatat 31908872  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  31908873 gtgaaatcacttattcaactaggataaaagaaaaaacaatt 31908913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 11937807 - 11938001
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||  ||||||||||||| ||| ||||| |||||||| ||||| | |||||| || |||||||||||    
T  11937807 taagacgggaaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgaagaaattacaaaaatcaacgaaagaaaaca 11937906  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatag-aagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||||||||||||||| |||||||||||||| ||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  11937907 aaaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 11938001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4732242 - 4732106
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||||| |||||||| ||||||| ||||| ||| |||| ||||||    
T  4732242 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagattcgttcagagacgatgaaatcacaaaaacaaacgaaa-aaaaca 4732144  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
     ||| ||||||||||||||| |||||||||||||||||    
T  4732143 aaaagtatgtgaaatcacttattcaattaggatagaag 4732106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 13878972 - 13879092
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||| ||||||||||||| ||| ||||| ||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||    
T  13878972 aaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatc 13879070  T
Q  117 acttgttcaattaggatagaag 138  Q
    |||| |||||||||||||||||    
T  13879071 acttattcaattaggatagaag 13879092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 14019097 - 14019217
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||| ||||||||||||| ||| ||||| ||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||    
T  14019097 aaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatc 14019195  T
Q  117 acttgttcaattaggatagaag 138  Q
    |||| |||||||||||||||||    
T  14019196 acttattcaattaggatagaag 14019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 27095864 - 27095731
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaa 113  Q
    |||||||||| | |||||||  || ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  27095864 aaaaaacacatcgcacaaagaggggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaa 27095765  T
Q  114 atcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||| ||||||||||||||||| ||||||||    
T  27095764 atcacttattcaattaggatagaaggaaaaacaa 27095731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36868180 - 36868032
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| ||||||||| | ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||  ||||| ||| ||||||||  |    
T  36868180 taagacgagaaatcaaaaacacatcgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcgcaaaaacaaacgaaagaaagta 36868081  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||| ||| || |||||| ||||||| ||||||||||    
T  36868080 gaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaatt 36868032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4604256 - 4604402
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||  || ||||  | |||||||||||||| ||| || || |||||||||||||||| ||||| ||  |||||||| ||    
T  4604256 taagacgggaaataaaaaacacactgcataaagatgaaaaatcaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaatcgaaagaaagca 4604355  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  4604356 gaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaa 4604402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28231046 - 28231194
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| || |||||||||||||| ||||||| ||| |||| |||||||| ||| | ||| |||||||| | ||||| ||||| ||| |||||||||||    
T  28231046 taagacgggatataaaaaacacaccgcacaaagacgggaaataaaaacaaacagagttgttcagagacgatggaatcacaaaaacaaacgaaagaaaaca 28231145  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| |||||  | |||||||| ||||||||||    
T  28231146 gaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaatt 28231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 18089353 - 18089489
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||| ||||| || |||| ||| ||||||||||||| ||| | ||| |||||||||||||||| |||||  ||    ||||||||||||||||    
T  18089353 gaaataaaaaatacaccgcataaagacgggaaatcaaaacaaaaagagttgttaagagacgacgaaatcacaaaaactaa----agaaaacagaaaatat 18089448  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  18089449 gtgaaatcacttattcaattaggatataagaaaaaacaatt 18089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 28261837 - 28261965
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| |||||||  || ||||||||| ||| ||| ||||| |||||||| ||||||| ||||| ||| |||||||||||    
T  28261837 taagacgggaaataaaaaacacaccgcacaaagaagggaaatcaaaagaaacagagtcgttcagagacgaagaaatcacaaaaacaaacgaaagaaaaca 28261936  T
Q  101 gaaaatatgtgaaatcacttgttcaatta 129  Q
    |||||||||| ||||||| | ||||||||    
T  28261937 gaaaatatgtaaaatcacatattcaatta 28261965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 33012229 - 33012101
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||| ||| ||| ||||||||||||| ||| | ||| |||||||||||||||| ||||| ||| |||| ||||| ||||||||||||||||||||    
T  33012229 acaccgcactaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacaaaaacaaacgaaacaaaactgaaaatatgtgaaatcactt 33012130  T
Q  121 gttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||| ||||||| ||||||||||    
T  33012129 attcaattagaatagaaggaaaaacaatt 33012101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 34416712 - 34416858
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||| |||||||| |||||| ||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| |||  ||| |||||     
T  34416712 taagacgaggaataaaaa-cacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttca-agacgacgaaatcacaaaaacaaacaaaaaaaaact 34416809  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  34416810 gaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaatt 34416858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17268083 - 17268219
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||| | ||||||| ||| ||||||||||||| | | ||||| |||||||||||||||| ||||  ||   ||| ||||||||||||||    
T  17268083 gaaatcaaaaacacaacgcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgacgaaatcacaaaacaaac--aaaaaaaacagaaaatat 17268180  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  17268181 gtgaaatcacttattcaattaggatagaaggaaaaacaa 17268219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 32015387 - 32015277
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| ||| | |||  ||||||||||||||| ||||| ||||||| |||||||||||||||    
T  32015387 gaaatcaaaaacacaccacacaaagacgggaaatcaaaacaaacagagttgttc-gagacgacgaaatcacaaaaacaaatgaatgaaaacagaaaatat 32015289  T
Q  109 gtgaaatcactt 120  Q
    ||||||||||||    
T  32015288 gtgaaatcactt 32015277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 4739489 - 4739355
Alignment:
Q  13 taaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtga 112  Q
    ||||||||||||| ||||||| ||  ||||||||||||| ||| || || |||||||||||||||| ||||| ||| | || ||||||||||||||||||    
T  4739489 taaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaaacggaaaaaaacagaaaatatgtga 4739390  T
Q  113 aatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||| |||| || ||||||||| |||| ||||||||    
T  4739389 aattacttatttaattaggatggaaggaaaaacaa 4739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 12891070 - 12891188
Alignment:
Q  4 gacgagaaataaaaaaca-caccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacaga 102  Q
    |||||||||| ||||||| |||| ||||||| ||| ||||||||||||| ||| |||||  ||||||||||||||| ||||| ||| ||||||||| |||    
T  12891070 gacgagaaatcaaaaacaacaccgcacaaagacgggaaatcaaaacaaacagagtcgttccgagacgacgaaatcacaaaaacaaacgaaagaaaataga 12891169  T
Q  103 aaatatgtgaaatcacttg 121  Q
    |||||||||||||||||||    
T  12891170 aaatatgtgaaatcacttg 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 15920032 - 15919853
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaa 113  Q
    |||||| ||||| ||||||| ||| ||||||||||||| ||| ||||  ||||| |||||||||| ||||| ||| ||||| |||  |||||||||||||    
T  15920032 aaaaaatacaccgcacaaagacgggaaatcaaaacaaacagagtcgtgcagagatgacgaaatcacaaaaacaaacgaaag-aaattgaaaatatgtgaa 15919934  T
Q  114 atcacttgttcaattaggatagaagaaaaaacaa---------ttgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||| || ||||||||||||||||| ||||||||          ||||||||||||||||||||||| |||||||| ||||    
T  15919933 atcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcacccctc 15919853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 34963025 - 34963161
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| |          ||||||||||    
T  34963025 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcaca----------aaagaaaaca 34963114  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  34963115 gaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaa 34963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41797766 - 41797649
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| |||||   |||||||||||||| ||||| ||| |||||||||||    
T  41797766 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttctaagacgacgaaatcacaaaaacaaacgaaagaaaaca 41797667  T
Q  101 gaaaatatgtgaaatcac 118  Q
     | |||||||||||||||    
T  41797666 tataatatgtgaaatcac 41797649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 34471130 - 34471002
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| | |||||| || || | ||||| ||| ||||||||| |||||||||    
T  34471130 gaaattaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcaaagacgaagacattacaaaaacaaacgaaagaaaatagaaaatat 34471031  T
Q  109 gtgaaatcacttgttcaattaggatagaa 137  Q
    |||||||||||  |||||||| |||||||    
T  34471030 gtgaaatcactgattcaattaagatagaa 34471002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29542964 - 29542881
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaa 84  Q
    ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||||| ||| ||||| |||||||||||||||| |||||    
T  29542964 taagacgggaaatcaaaaacacaccgcacaaaaacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaa 29542881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 9689993 - 9690067
Alignment:
Q  72 gaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaaca 146  Q
    ||||||| ||||| ||| |||| |||||| ||||||||||| ||||||| ||||||||||||||||| |||||||    
T  9689993 gaaatcacaaaaacaaacgaaaaaaaacaaaaaatatgtgagatcacttattcaattaggatagaaggaaaaaca 9690067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 17767566 - 17767647
Alignment:
Q  67 acgacgaaatcataaaaataaatgaaagaaaacagaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| ||||  |||||||||||||| |||||||||| |||||||||| || |||||||||| ||| ||||||||    
T  17767566 acgacgaaatcacaaaatcaaatgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatataaggaaaaacaa 17767647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 19382399 - 19382477
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaa 88  Q
    |||||||||||||||| ||||||| ||||||||||||||||| | | || |  |||||| ||||||||  |||||||||    
T  19382399 aaataaaaaacacaccgcacaaagacggaaaatcaaaacaaacaaagtcatgcagagacaacgaaatcgcaaaaataaa 19382477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 6431402 - 6431483
Alignment:
Q  67 acgacgaaatcataaaaataaatgaaagaaaacagaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| ||||| |||  ||||||||| |||||||||| |||||||||| || |||||| ||| ||| ||||||||    
T  6431402 acgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtggaaatcacttatttaattagaatataaggaaaaacaa 6431483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 45694414 - 45694532
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatca-taaaaataaatgaaagaaaacagaaaatatgt-g 111  Q
    |||||||||| | ||||||| ||||||||||||||||| ||| ||||  | | |||| |||||||  |||||||||| |||||| ||  | ||||| | |    
T  45694414 aaaaaacacatcgcacaaagacggaaaatcaaaacaaacagagtcgtgcaaatacgatgaaatcacaaaaaataaataaaagaagactaacaatatatgg 45694513  T
Q  112 aaatcacttgttcaattag 130  Q
    ||||||||| |||||||||    
T  45694514 aaatcacttattcaattag 45694532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 17792578 - 17792533
Alignment:
Q  69 gacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    |||||||||| ||||| ||| |||||||||| ||||||||||||||    
T  17792578 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 17792533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38384406 - 38384455
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaa 50  Q
    |||||||  |||||||||||||||| ||||||| ||| ||||||||||||    
T  38384406 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaa 38384455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 38384481 - 38384537
Alignment:
Q  91 aaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||| ||||| |||| |||||||||||||| |||||||||| || ||| ||||||||    
T  38384481 aaaggaaacaaaaaaaatgtgaaatcacttattcaattagggtataaggaaaaacaa 38384537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9785489 - 9785341
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||| ||||||| ||||||||||| ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||  ||||||||||    
T  9785489 taagatgagaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaatagagtcgttcagagacgacgaaatcacaaaaataaacaaaagaaaaca 9785390  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  9785389 aaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaatt 9785341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 46025978 - 46026171
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||| | ||||| ||| |||||||||||    
T  46025978 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaataacaaaaacaaacgaaagaaaaca 46026077  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||||| |||| |||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  46026078 aaaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctc 46026171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10094613 - 10094465
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  10094613 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 10094514  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  10094513 gaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 10094465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 42603726 - 42603866
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||| | ||||||| ||| ||||||||||||| ||| ||||||| |||||||||||||| ||||| ||| |||||||||||||||||||    
T  42603726 gaaataaaaaacacagcgcacaaagacgggaaatcaaaacaaacagagtcgtttatagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 42603825  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| |||||||| |||||||  ||||||||||    
T  42603826 gtgaaatcacttattcaattatgatagaatgaaaaacaatt 42603866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 21603632 - 21603486
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||| | ||| ||||||||||||||||||  ||| ||||||||| |||||| ||||| ||| |||||||||||    
T  21603632 taagacgggaaatcaaaaacacaccgcacaatgacgggaaatcaaaacaaatagat--gttcagagacgacaaaatcacaaaaacaaaggaaagaaaaca 21603535  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21603534 gagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 21603486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 21990834 - 21990685
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| ||| |||||||||||| ||||| ||| |||||||||||    
T  21990834 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaaaagagtcgttcagaaacgacgaaatcacaaaaacaaacgaaagaaaaca 21990735  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatag-aagaaaaaacaatt 149  Q
    ||| |||||||||||||||| |||||||||||||| | ||||||||||||    
T  21990734 gaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaatt 21990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 15674569 - 15674709
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||  ||||| ||||| |||||||||| ||||| ||| |||||||||||||||||||    
T  15674569 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagggtcgttcagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 15674668  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| |||||||||||||| || ||||||||||    
T  15674669 gtgaaatcacttattcaattaggataggaggaaaaacaatt 15674709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 32740924 - 32740777
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||| || |||||||| | | ||||||||||||| ||| |||||  ||||||||||||||| |||||| || |||||||||||    
T  32740924 taagacgggaaataaaaaacatac-acacaaagacaggaaatcaaaacaaacagagtcgttctgagacgacgaaatcacaaaaatcaacgaaagaaaaca 32740826  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  32740825 aaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 32740777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45457505 - 45457653
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||||||||||||| | | ||||| |||||||| |||||||  |||| ||| |||||||||||    
T  45457505 taagacgagaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgatgaaatcacgaaaacaaacgaaagaaaaca 45457604  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  45457605 taaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaatt 45457653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3266558 - 3266423
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| |||  |||||| ||||||| ||| ||||||||||||| ||| ||||| ||||||||| |||||| ||||||||| ||||| |||||    
T  3266558 taagacgagaaatcaaa--cacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaataaacgaaaggaaaca 3266461  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3266460 gaaaatatgtgaaatcacttattcaattaggatagaag 3266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 45482236 - 45482091
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| | ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||||||||| ||| |||| ||  ||    
T  45482236 taagacgggaaataaaaaacacatcgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcataaaaacaaacgaaacaacgca 45482137  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaaca 146  Q
     ||||||||||||||||||| || |||||||||||||| |||||||    
T  45482136 taaaatatgtgaaatcacttatttaattaggatagaaggaaaaaca 45482091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 1281086 - 1281234
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||  ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  1281086 taagacgggaaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 1281185  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||||||| ||| ||  ||||||||||    
T  1281186 aaaaatatgtgaaatcacttattcaattagaatataatgaaaaacaatt 1281234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 28664895 - 28665007
Alignment:
Q  35 cggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggata 134  Q
    ||||||||||||||||| ||| ||||| ||||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  28664895 cggaaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggata 28664994  T
Q  135 gaagaaaaaacaa 147  Q
    |||| ||||||||    
T  28664995 gaaggaaaaacaa 28665007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 42644844 - 42644700
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| ||||    |||||||| ||||| ||| |||||||||||    
T  42644844 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagag----cgaaatcacaaaaacaaacgaaagaaaaca 42644749  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  42644748 gagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 42644700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 6667567 - 6667374
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||||||| | ||| |||  ||| ||||||    
T  6667567 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacagaaacaaa-caaacaaaaca 6667469  T
Q  101 gaaaatatgtgaaatcacttgttc-aattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||         ||||||||||||||||||||||  |||||||||||||    
T  6667468 gaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcctc 6667374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 17473692 - 17473820
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||||||| ||| ||||||||||||| ||| || || ||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  17473692 acaccgcacaaagacgggaaatcaaaacaaacagagtcattcagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcactt 17473791  T
Q  121 gttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||| ||| ||||||||||    
T  17473792 attcaattaggataaaaggaaaaacaatt 17473820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 17579522 - 17579394
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||||||| ||| ||||||||||||| ||| || || ||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  17579522 acaccgcacaaagacgggaaatcaaaacaaacagagtcattcagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcactt 17579423  T
Q  121 gttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||| ||| ||||||||||    
T  17579422 attcaattaggataaaaggaaaaacaatt 17579394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 39532932 - 39533072
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| |||||||  || |||||||||| || ||| ||||| | ||||||||||||||  |||| |||  ||||||||||||||||||    
T  39532932 gaaataaaaaacacaccgcacaaagatgggaaatcaaaactaacagagtcgttcaaagacgacgaaatcacgaaaacaaacaaaagaaaacagaaaatat 39533031  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| |||||||| |||||||| ||||||||||    
T  39533032 gtgaaatcacttattcaattaagatagaaggaaaaacaatt 39533072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 43847233 - 43847094
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||||| |||||||  || ||||||||| ||| ||| ||||| ||||||||||||||||  |||| ||| ||| ||||||||||||||||    
T  43847233 aaataaaaaacacaccgcacaaagatgggaaatcaaaataaacagagtcgttcagagacgacgaaatcaccaaaacaaacgaaggaaaacagaaaatatg 43847134  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||| |||||||||||||  || ||||||||||    
T  43847133 tgaaatcacttattcaattaggataagaggaaaaacaatt 43847094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10574553 - 10574405
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||| ||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  10574553 taagacggaaaattaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 10574454  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||| |||||  || ||||||||||||| ||| ||||||||||    
T  10574453 gaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaatt 10574405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11833190 - 11833043
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||||||||| ||| |||||| ||||||  ||| ||||||||||||| ||  | ||  |||||||||||||||| ||||| ||| ||||||| |||    
T  11833190 taagacgagaaatataaa-cacaccgcacaaaaacgggaaatcaaaacaaacagggttgtacagagacgacgaaatcacaaaaacaaacgaaagaataca 11833092  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  11833091 gaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaatt 11833043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 17509153 - 17509301
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||  ||||||| ||| ||||||||||||| ||| || || ||||||||| |||||| ||||| |||| |||| |||||    
T  17509153 taagacggaaaatcaaaaacacactgcacaaagacgggaaatcaaaacaaacagagtcattcagagacgacaaaatcacaaaaacaaattaaaggaaaca 17509252  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  17509253 gaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataatt 17509301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17544061 - 17543913
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||  ||||||| ||| ||||||||||||| ||| || || ||||||||| |||||| ||||| |||| |||| |||||    
T  17544061 taagacggaaaatcaaaaacacactgcacaaagacgggaaatcaaaacaaacagagtcattcagagacgacaaaatcacaaaaacaaattaaaggaaaca 17543962  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  17543961 gaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataatt 17543913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 36579281 - 36579409
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||| ||| ||| ||||||||||||||||| ||||| |||||||||||||||| ||||| |||  |||||||||| |||||||||| ||||||||    
T  36579281 acaccgcactaagacgggaaatcaaaacaaatagagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtggaatcactt 36579380  T
Q  121 gttcaattaggatagaagaaaaaacaatt 149  Q
     ||||| ||||||||||| ||||||||||    
T  36579381 attcaactaggatagaaggaaaaacaatt 36579409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 48304342 - 48304537
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaat--cataaaaataaatgaaagaaaa 98  Q
    |||||||||||||||||||||||||  |||||| ||| ||||||||||||| ||| ||||| | ||||||||||||  || ||||| |||  ||||||||    
T  48304342 taagacgagaaataaaaaacacaccgtacaaagacgggaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaaaacaaactaaagaaaa 48304441  T
Q  99 cagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||| | ||||||||||| |||||||||||||| || |||| ||||         ||||||||||||||||||||||  |||||||| ||||    
T  48304442 cagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctc 48304537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9719922 - 9720095
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaa-c 99  Q
    |||||||  |||| ||| |||||| |||| ||| ||| ||||||||||||| ||| ||||| ||||| |||||||||| ||||| ||| |||| |||| |    
T  9719922 taagacggaaaatcaaacacacacaacacgaagacgggaaatcaaaacaaacagagtcgttcagagatgacgaaatcacaaaaacaaacgaaaaaaaaac 9720021  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt---gatttttgggtcaaaattgac 170  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||    ||||||| ||||||||||||    
T  9720022 agaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaatttttgagtcaaaattgac 9720095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22747458 - 22747599
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||| | |||||||| || ||||||| ||| || |||||||||| ||| ||||  ||||||| |||||||| |||||||||||||||||||||    
T  22747458 taagacgggaactcaaaaacacgccgcacaaagacgggaa-tcaaaacaaaaagagtcgtgcagagacggcgaaatcacaaaaataaatgaaagaaaaca 22747556  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
     ||||||||| ||||||||| ||||||||||||||||| ||||    
T  22747557 taaaatatgtcaaatcacttattcaattaggatagaaggaaaa 22747599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24320172 - 24320318
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| || |||| ||| ||||||||||||| ||| ||||  |||||||| ||||||| ||||| |||  ||||||||||    
T  24320172 taagacggaaaataaaaaacacaccgcagaaagacgggaaatcaaaacaaacagagtcgtgcagagacgatgaaatcacaaaaacaaacaaaagaaaaca 24320271  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||||||||||||||||| || ||||| |||||||| ||||||||    
T  24320272 aaaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaa 24320318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 41288114 - 41287987
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||| ||||||||||||| ||  ||||| ||||||||| ||||||  |||| ||| ||||| |||||||||||||||||||||    
T  41288114 aaacacaccgcacaaagacgggaaatcaaaacaaacagtgtcgttcagagacgacaaaatcactaaaacaaacgaaaggaaacagaaaatatgtgaaatc 41288015  T
Q  117 acttgttcaattaggatagaagaaaaaa 144  Q
    || | ||||||||||||||||| |||||    
T  41288014 acctattcaattaggatagaaggaaaaa 41287987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 5684499 - 5684389
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||| |||||||| ||| ||||| |||||| ||||||||| ||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||     
T  5684499 aaataaaaacaaacagaatcgttcagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaat 5684400  T
Q  139 aaaaaacaatt 149  Q
     ||||||||||    
T  5684399 gaaaaacaatt 5684389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 5709549 - 5709439
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||| |||||||| ||| ||||| |||||| ||||||||| ||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||     
T  5709549 aaataaaaacaaacagaatcgttcagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaat 5709450  T
Q  139 aaaaaacaatt 149  Q
     ||||||||||    
T  5709449 gaaaaacaatt 5709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 32643146 - 32643040
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||||  ||| || || |||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32643146 aaatcaaaacaatcagagtctttcagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttgttcaattaaggtagaag 32643047  T
Q  139 aaaaaac 145  Q
    |||||||    
T  32643046 aaaaaac 32643040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2622756 - 2622616
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||  ||  ||||||||||||| |||  | || | |||||||||||||| ||||| ||| | |||||||||||||||||    
T  2622756 gaaataaaaaacacaccgcacaaaaacgagaaatcaaaacaaacagagccattcaaagacgacgaaatcacaaaaacaaacgcaagaaaacagaaaatat 2622657  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     |||||| |||| |||||||| |||||||| ||||||||||    
T  2622656 ctgaaattacttattcaattaagatagaaggaaaaacaatt 2622616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 36719501 - 36719620
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  ||||||||||||| |  ||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  36719501 taagacggaaaataaaaaacacgctgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 36719600  T
Q  101 gaaaa--tatgtgaaatcac 118  Q
    |||||  |||||||||||||    
T  36719601 gaaaatttatgtgaaatcac 36719620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 4621324 - 4621462
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||  ||||| || | ||||| ||||| ||| |||||||||| ||||| ||    
T  4621324 gaaatcaaaaacacaccacacaaagacggaaaatcaaaacaaacagagtcgtgcagagatgatggaatcacaaaaacaaacgaaagaaaactgaaaacat 4621423  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||||| ||| |||||||| | |||||| ||||||||    
T  4621424 atgaaatcgcttattcaattatggtagaaggaaaaacaa 4621462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 27535587 - 27535480
Alignment:
Q  44 aaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaa--atatgtgaaatcacttgttcaattaggatagaagaaa 141  Q
    |||||||| ||| ||||||||||||||| |||||| ||||| |||||||| ||||||||||  |||||||||||||||| | ||||||| ||||||| ||    
T  27535587 aaaacaaacagagtcgtttagagacgacaaaatcacaaaaacaaatgaaataaaacagaaaatatatgtgaaatcacttatacaattagaatagaaggaa 27535488  T
Q  142 aaacaatt 149  Q
    ||||||||    
T  27535487 aaacaatt 27535480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 26161116 - 26161038
Alignment:
Q  37 gaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaat 115  Q
    ||||||||||||||| ||| ||||| |||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  26161116 gaaaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaat 26161038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21954767 - 21954914
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||| ||||||||||||||||||| |||  |   ||||||||||||| | | ||||  |||||||||||||||| ||||| | | ||||||||||     
T  21954767 taagacgaaaaataaaaaacacaccacataaaaacttgaaatcaaaacaaacacaatcgtgcagagacgacgaaatcacaaaaacagacgaaagaaaact 21954866  T
Q  101 gaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    || ||||||| ||||||| || || |||||||||||||  ||||||||    
T  21954867 gacaatatgtggaaatcatttatttaattaggatagaatgaaaaacaa 21954914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 36253094 - 36252994
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaa-taaatgaaagaaaacagaaaata 107  Q
    ||||| ||||||||||| ||||||| ||| |||| |||||||| ||| ||||| |||||||||||||||| |||||  ||| |||||||| |||||||||    
T  36253094 gaaatcaaaaacacaccgcacaaagacgggaaattaaaacaaacagagtcgttcagagacgacgaaatcacaaaaagaaaaagaaagaaagcagaaaata 36252995  T
Q  108 t 108  Q
    |    
T  36252994 t 36252994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 14657808 - 14657917
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaa--atatgtgaaatcacttgttcaattaggataga 136  Q
    ||||||||| ||| ||| ||||  |||||||||||||||| ||||| |||  ||||||||| ||||  ||||||||||| |||| |||||||| ||||||    
T  14657808 aaatcaaaagaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatatgtgaaataacttattcaattaagataga 14657907  T
Q  137 agaaaaaaca 146  Q
    || |||||||    
T  14657908 aggaaaaaca 14657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 9137121 - 9137017
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| |||||| | |||||||| ||| ||||  |||||||||| ||||| ||||| ||| ||||||| || | ||||||    
T  9137121 gaaataaaaaacacaccgcacaaagacggaaa-taaaaacaaacagaatcgtgcagagacgacggaatcacaaaaagaaacgaaagaagacgggaaatat 9137023  T
Q  109 gtgaaa 114  Q
    ||||||    
T  9137022 gtgaaa 9137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37375980 - 37376093
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||  ||||||||||||| ||| || ||  |||||||| |||||| | ||| ||| ||||||||| |    
T  37375980 taagacggaaaataaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcattctgagacgacaaaatcacataaacaaacgaaagaaaata 37376079  T
Q  101 gaaaatatgtgaaa 114  Q
    ||||||||| ||||    
T  37376080 gaaaatatgagaaa 37376093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 15017334 - 15017421
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaa 97  Q
    |||||||||||||||| ||||||| |   ||||||||||||| ||| ||||| |||||| ||||||||| ||||| |||  |||||||    
T  15017334 aaataaaaaacacaccgcacaaagacaagaaatcaaaacaaacagagtcgttcagagacaacgaaatcacaaaaacaaacaaaagaaa 15017421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 39707442 - 39707315
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgt-ga 112  Q
    |||||||||||| ||||||| ||||||||||||||||| |||        ||||||||||||||| ||||| ||| ||| |||||  |||||||  | ||    
T  39707442 aaaaaacacaccgcacaaagacggaaaatcaaaacaaacaga-------ggagacgacgaaatcacaaaaacaaacgaatgaaaagtgaaaatacatgga 39707350  T
Q  113 aatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||| |||| || |||||||||||||  ||||||||    
T  39707349 aataacttatttaattaggatagaaagaaaaacaa 39707315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25112684 - 25112610
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaa 75  Q
    ||||||| ||||||||||||||||| |||||||  | ||||| |||||||| ||| || | ||||||||| ||||    
T  25112684 taagacgtgaaataaaaaacacaccgcacaaagaagaaaaataaaaacaaacagagtcttctagagacgatgaaa 25112610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32116531 - 32116583
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaata 53  Q
    |||||||| |||| ||||||||| ||| |||||  ||||||||||||||||||    
T  32116531 taagacgaaaaatcaaaaacacatcacgcaaagatggaaaatcaaaacaaata 32116583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 42396461 - 42396609
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||| ||||||||| || |||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  42396461 taagacgggaaatcaaaaacacatcacacaaagacgaaaaatcaaaacaaacagattcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaaca 42396560  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||| ||| |||||||| |||||||||||||| ||||    
T  42396561 aaaaatatgtgaaatcgcttattcaattaagatagaagaaaaaataatt 42396609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17331500 - 17331354
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  17331500 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 17331401  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  17331400 gaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 17331354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 17699725 - 17699535
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| | ||||| | | ||||||||||||||| | || || |||||||||||||||| ||||| ||| |||||||||||    
T  17699725 taagacgggaaataaaaaacacaccgcgcaaagacaggaaatcaaaacaaatatagtcattcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 17699626  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactc 182  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||  ||||||||||    
T  17699625 gaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcactc 17699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 3740515 - 3740387
Alignment:
Q  15 aaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    ||||||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| | ||| ||| |||||||||||||||||||||||||    
T  3740515 aaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtttagagacgacgaaatcacacaaacaaacgaaagaaaacagaaaatatgtgaaa 3740416  T
Q  115 tcacttgttcaattaggatagaagaaaaa 143  Q
    |||||| ||||||||||||||||| ||||    
T  3740415 tcacttattcaattaggatagaaggaaaa 3740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 34431224 - 34431084
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| | |||||||||||||| ||||  ||| |||||||||||||||||||    
T  34431224 gaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaatcaaacgaaagaaaacagaaaatat 34431125  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||||||  ||||||||||||||||||    
T  34431124 gtgaaatcacttattcaattaaaatagaagaaaaaacaatt 34431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33164417 - 33164565
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| |||||||| |  ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  33164417 taagacgggaaatcaaaaacacgctgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 33164516  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||||    
T  33164517 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaatt 33164565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 39179785 - 39179925
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    |||||||||||||| || |||||||  || ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  39179785 gaaataaaaaacactccgcacaaagatgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 39179884  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||    
T  39179885 gtgaaatcacttattcaattagaatagaaggaaaaataatt 39179925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 17096204 - 17096331
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||| ||||||||| |||||| ||||| ||| ||||| |||||||||||||||||||||    
T  17096204 aaacacaccgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatc 17096303  T
Q  117 acttgttcaattaggatagaagaaaaaa 144  Q
    |||| ||||||||||||||||| |||||    
T  17096304 acttattcaattaggatagaaggaaaaa 17096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32347663 - 32347806
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| |||||||||| || ||| ||||| ||| |||||||||||| ||||| ||| |||| ||||||    
T  32347663 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaaccaacagagtcgttcagaaacgacgaaatcacaaaaacaaacgaaataaaaca 32347762  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  32347763 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaa 32347806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 6281216 - 6281023
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||||| ||| |||| ||||||||||||||||| ||||| ||| ||||||||| |    
T  6281216 taagacgggaaatcaaaaacacaccgcacaaaaacggtaaatcaaaacaaacagagtcgtctagagacgacgaaatcacaaaaacaaacgaaagaaaata 6281117  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||| ||||||||| ||||||||| ||||||| ||||| |||         ||||||||||||||||||||||  |||||||| ||||    
T  6281116 gaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcacccctc 6281023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 28040793 - 28040608
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||||||   ||||||| |||||||| |||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  28040793 gaaatcaaaaacacaatgcacaaagacggaaaattaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 28040694  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||| ||||||||||||| ||| |||||| ||         ||||||||||||||||||||||  |||||||| ||||    
T  28040693 gtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctc 28040608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 42609316 - 42609168
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||  | | | ||| ||||||||| |||||| ||||| |||  |||||||| |    
T  42609316 taagacgtgaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaatcaaagttgttcagagacgacaaaatcacaaaaacaaacaaaagaaaata 42609217  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42609216 gaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaatt 42609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 6635406 - 6635276
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    |||||||||  ||||||  |||||||||||||||| ||| ||||| |||||||||||||||| ||||| |||  ||||||||||||||||||||||||||    
T  6635406 aaacacaccttacaaagaaggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtgaaatc 6635307  T
Q  117 acttgttcaattaggatagaagaaaaaacaa 147  Q
    |||| |||||||| |||||||| ||||||||    
T  6635306 acttattcaattatgatagaaggaaaaacaa 6635276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 18653946 - 18653808
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  18653946 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaatcagaaaatat 18653847  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
      |||||||||| ||||||||||||| ||||||||||||    
T  18653846 acgaaatcacttattcaattaggatataagaaaaaacaa 18653808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 29097961 - 29097815
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||| ||||| |||||||  || ||||||||||||| ||| ||||| | |||||||||||||| ||||| |||  ||||||||||    
T  29097961 taagacgggaaataaaaaatacaccgcacaaagatgggaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaacaaactaaagaaaaca 29097862  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||    
T  29097861 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 29097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 12891839 - 12891706
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||||| ||||||| ||  ||||||| ||||| ||| ||||  |||||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  12891839 aaattaaaaacacaccgcacaaagacgtgaaatcaatacaaacagagtcgtgcagagacaacgaaatcacaaaaacaaacgaaagaaaacagaaaatatg 12891740  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    ||||||||||| ||||||||||||| ||| ||||    
T  12891739 tgaaatcacttattcaattaggataaaaggaaaa 12891706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20483358 - 20483209
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||||||||||| ||  ||||||||||||| ||| | ||| | |||||||||||||| ||||| |||  ||| ||||||    
T  20483358 taagacgggaaatcaaaaacacaccacacaaagacgataaatcaaaacaaacagagttgttcaaagacgacgaaatcacaaaaacaaacaaaacaaaaca 20483259  T
Q  101 gaaaatatgtgaaatcacttgttc-aattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||||||||||    
T  20483258 gaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaacaatt 20483209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 27241220 - 27241088
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||| ||||||||| ||| |   ||||| | |||||||||||| | ||||| ||| |||||||||||||||||||||||||||    
T  27241220 aaacacaccgcacaaagacgggaaatcaaaataaacaaggtcgttcaaagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatc 27241121  T
Q  117 acttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||| ||||||||||||| ||| ||||||||||    
T  27241120 acttattcaattaggataaaaggaaaaacaatt 27241088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 178066 - 178201
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgttt--agagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtg 111  Q
    |||||||||||| ||||||| | | ||||||||||||| ||| ||||    |||||||||||||||| ||||| ||| ||||||||||| ||||||||||    
T  178066 aaaaaacacaccgcacaaagccaggaaatcaaaacaaacagagtcgtgcgcagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg 178165  T
Q  112 aaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||| ||||||||||||| ||| ||| ||||    
T  178166 aaatcacttattcaattaggatataaggaaacacaa 178201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2555299 - 2555418
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||| ||||| ||||||  | | ||||||||||||| ||| ||||| |||||||||||||||||||||| ||| |||||||||||    
T  2555299 taagacggaaaataaaaaatacaccgcacaaatactggaaatcaaaacaaacagagtcgttcagagacgacgaaatcataaaaacaaacgaaagaaaaca 2555398  T
Q  101 gaaaatatgtgaaatcactt 120  Q
     |||| ||||||||||||||    
T  2555399 aaaaaaatgtgaaatcactt 2555418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11734768 - 11734892
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||  |||  |||||||  |    
T  11734768 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaagcaaactaaagaaa--a 11734865  T
Q  101 gaaaatatgtgaaatcacttgttcaat 127  Q
    |||||||||||||||||||| ||||||    
T  11734866 gaaaatatgtgaaatcacttattcaat 11734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 7771779 - 7771887
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaac-agaaaatat 108  Q
    |||| ||||||||||  ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||| | |||||||    
T  7771779 aaatcaaaaacacacagcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaaatat 7771878  T
Q  109 gtgaaatca 117  Q
    |||||||||    
T  7771879 gtgaaatca 7771887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6681825 - 6681969
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||||||||| ||||| ||||||| ||| ||||||||||||| |||  ||| ||||||| ||||||| | ||||| ||| |||||  ||      
T  6681825 taagacgagaaataaaaaatacaccgcacaaagacggtaaatcaaaacaaacagagccgtgtagagacaacgaaattacaaaaacaaacgaaag--aatt 6681922  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||  |||| ||| ||||||||    
T  6681923 gaaaatatgtgaaatcacttattcaattcagataaaaggaaaaacaa 6681969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 12439617 - 12439731
Alignment:
Q  35 cggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggata 134  Q
    ||||||||||||||||| ||| || || | | |||||||||||| ||||| ||| ||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  12439617 cggaaaatcaaaacaaacagagtcattcaaaaacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatatgaaatcacttattcaactaggata 12439716  T
Q  135 gaagaaaaaacaatt 149  Q
    |||  ||||||||||    
T  12439717 gaatgaaaaacaatt 12439731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 17687369 - 17687231
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||  ||||||  ||| ||||||||| ||| ||| ||||  |||||| ||||||||| ||||| |||  ||||||||| ||||||||    
T  17687369 gaaatcaaaaacacactgcacaaaaacgggaaatcaaaagaaacagagtcgtgcagagacaacgaaatcacaaaaacaaacaaaagaaaactgaaaatat 17687270  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||| |||| |||||||| |||||||| ||||||||    
T  17687269 gtgaaataacttattcaattaagatagaaggaaaaacaa 17687231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 43493972 - 43493896
Alignment:
Q  73 aaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||| ||||| ||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  43493972 aaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaatt 43493896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 23882074 - 23882213
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||| ||||| || |||| ||  |||| |||||||| ||  ||||| |||||||||||||||| ||||| ||| || |||||| | ||||||||    
T  23882074 aaatcaaaaaaacaccgcataaagacgagaaataaaaacaaacagggtcgttcagagacgacgaaatcacaaaaacaaacgatagaaaatataaaatatg 23882173  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    | ||||||||| ||||||| ||||||||  ||||||||||    
T  23882174 tcaaatcacttattcaatttggatagaaagaaaaacaatt 23882213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26295006 - 26295152
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatca-taaaaataaatgaaagaaaac 99  Q
    |||||||  |||| ||| ||||| | || |||| ||| || |||||||||| ||| ||||| |||||||||||  ||| |||||| ||| |||||||||     
T  26295006 taagacggaaaatcaaagacacatcgcaaaaagacgggaagtcaaaacaaacagagtcgttcagagacgacgatctcactaaaaacaaaagaaagaaaat 26295105  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaaca 146  Q
    ||||||| ||| ||||||||| |||||| |||||||||| |||||||    
T  26295106 agaaaatttgttaaatcacttattcaataaggatagaaggaaaaaca 26295152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 3079292 - 3079400
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    |||| |||||||| | | ||||| ||||||||| |||||| ||||| ||| |||| ||| |||||||||||| ||||||||| |||||||| |||| |||    
T  3079292 aaatgaaaacaaacaaagtcgttcagagacgacaaaatcacaaaaacaaacgaaaaaaagcagaaaatatgttaaatcacttattcaattatgatataag 3079391  T
Q  139 aaaaaacaa 147  Q
     ||||||||    
T  3079392 gaaaaacaa 3079400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23428424 - 23428306
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaa---agaaa 97  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||||||||||||| | | || || |||||||||||||| | ||||| |||  ||   | |||    
T  23428424 taagacgagaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcattcagagacgacgaaataaaaaaaaaaaacaaaacgaaaaa 23428325  T
Q  98 acagaaaatatgtgaaatc 116  Q
    ||| |||||||||||||||    
T  23428324 acaaaaaatatgtgaaatc 23428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 39531367 - 39531494
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    |||||||||||||||||   ||||| ||| ||||||||||||  ||| ||||| |      ||||||||| ||||| |||  |||||||||||||| |||    
T  39531367 gaaataaaaaacacaccgtccaaagacgggaaatcaaaacaatcagagtcgttca------acgaaatcacaaaaacaaacaaaagaaaacagaaa-tat 39531459  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    |||||||||||| |||||||| |||||||| ||||    
T  39531460 gtgaaatcacttattcaattacgatagaaggaaaa 39531494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 7150985 - 7150860
Alignment:
Q  5 acgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaa 104  Q
    ||||||||||||||||||||  ||||||| ||  ||||||||||||| ||| | || || ||||| |||| ||| ||||| ||| ||| ||| || ||||    
T  7150985 acgagaaataaaaaacacacagcacaaagacgagaaatcaaaacaaacagagttgtgtaaagacgtcgaattcacaaaaacaaacgaaggaagactgaaa 7150886  T
Q  105 atatgt-gaaatcacttgttcaatta 129  Q
    |||||| ||||| |||| ||||||||    
T  7150885 atatgtagaaattacttattcaatta 7150860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 981015 - 981120
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||| | ||| | ||| ||||||||| |||||  ||| | ||||||||||   ||  ||||||||||||||||| ||||||||| ||||||||    
T  981015 aaatcaaaacatacagagtggttcagagacgacaaaatcgcaaatacaaatgaaaga---cattaaatatgtgaaatcactcgttcaattatgatagaag 981111  T
Q  139 aaaaaacaa 147  Q
     ||||||||    
T  981112 gaaaaacaa 981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9196787 - 9196833
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaa 47  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  9196787 taagacgaaaaataaaaaacacactacacaaaggcggaaaataaaaa 9196833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 25962091 - 25961953
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| ||||||||| | ||||||| ||  ||||||||||||  ||| ||        |||||||||||| ||||| ||| ||||||||||     
T  25962091 taagacgagaaattaaaaacacagcgcacaaagacgagaaatcaaaacaatcagagtc--------acgacgaaatcacaaaaacaaaggaaagaaaact 25962000  T
Q  101 g-aaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaac 145  Q
    | ||||||||| |||||||||| || |||||||||| ||| ||||||    
T  25961999 gaaaaatatgtagaaatcacttatttaattaggatataaggaaaaac 25961953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 12215305 - 12215177
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||| ||||||| |||||||| || | ||||| | ||||||||||||||| ||| |||  | ||||||||||||||| | ||  ||| ||||||| ||     
T  12215305 taagatgagaaatcaaaaacaccccgctcaaagacagaaaatcaaaacaaacagagtcg--tggagacgacgaaatcacataagcaaacgaaagaagact 12215208  T
Q  101 gaaaatatgtgaa-atcacttgttcaattag 130  Q
     |||||||||||| ||||  |||||||||||    
T  12215207 aaaaatatgtgaagatcatctgttcaattag 12215177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14535070 - 14535024
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaa 47  Q
    ||||| ||||||||||||||||||| ||||||| ||| |||||||||    
T  14535070 taagatgagaaataaaaaacacaccgcacaaagacgggaaatcaaaa 14535024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 17732343 - 17732385
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaa 51  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||    
T  17732343 gaaataaaaaacacaccgcacaaagacggaaaataaaaacaaa 17732385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25487780 - 25487667
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||| | |   |||| || |||||||||||||||| || | ||||  | ||||||||||||||  |||| ||| ||||||| |      
T  25487780 taagacgggaaataaaaaagaaattgcacagagacggaaaatcaaaacaagtaaagtcgtacaaagacgacgaaatcacgaaaacaaacgaaagaacaat 25487681  T
Q  101 gaaaatatgtgaaa 114  Q
    ||||||||||||||    
T  25487680 gaaaatatgtgaaa 25487667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 26240692 - 26240740
Alignment:
Q  66 gacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    ||||||||||||| || || |||| ||||||||| ||||||||||||||    
T  26240692 gacgacgaaatcacaataacaaataaaagaaaactgaaaatatgtgaaa 26240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 35275952 - 35276044
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaa-tagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||  ||||||| ||| ||||||||||||| |||| ||||  | ||||||| |||||| ||||| ||| ||||||| || ||||||||    
T  35275952 aaacacactgcacaaagacggtaaatcaaaacaaattagagtcgtgcaaagacgacaaaatcacaaaaacaaacgaaagaagactgaaaatat 35276044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14600655 - 14600801
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||||| |||||||| | ||||||||||| ||| ||||||||||||| ||| ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  14600655 taagacgagagataaaaaataaaccacacaaagacgggaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 14600754  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  14600755 gaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaa 14600801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 31308312 - 31308174
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  31308312 gaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtttagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatat 31308213  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  31308212 gtgaaatcacttattcaattaggatagaaggaaaaacaa 31308174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 41361896 - 41361758
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||||||| |||||| ||||| ||| |||||||||||||||||||    
T  41361896 gaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtttagagacgaccaaatcacaaaaacaaacgaaagaaaacagaaaatat 41361797  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| |||||||| | |||||| ||||||||    
T  41361796 gtgaaatcacttattcaattacggtagaaggaaaaacaa 41361758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12329799 - 12329650
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaat-gaaagaaaac 99  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| | | ||||| |||||||||||||||| ||||| |||  ||||||||||    
T  12329799 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaaacgaaagaaaac 12329700  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  12329699 agaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 12329650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 37612825 - 37612632
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||| ||||| |||||||||||||||| ||||| ||| ||||||||| |    
T  37612825 taagacgggaaatcaaaaacacaccacataaagacggaaaaacaaaacaaatagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaata 37612726  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||||||||||||||| ||||| ||||||||||| ||||| |||         ||||||||||||||||||||||  |||||||| ||||    
T  37612725 aaaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 37612632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10338779 - 10338927
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| ||||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  10338779 taagacgggaaataaaaaacacatcacacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 10338878  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  10338879 aaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 10338927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 30026853 - 30026983
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| || |||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  30026853 aaacacaccgcagaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatc 30026952  T
Q  117 acttgttcaattaggatagaagaaaaaacaa 147  Q
    |||| |||||||| |||||||||||||||||    
T  30026953 acttattcaattatgatagaagaaaaaacaa 30026983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7579812 - 7579945
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||| | ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  7579812 taagacgggaaataaaaaacacaacgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 7579911  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggata 134  Q
    |||||||||||||||||||| |||||||| ||||    
T  7579912 gaaaatatgtgaaatcacttattcaattaagata 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 24791125 - 24791318
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||  ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  24791125 taagacgggaaattaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 24791224  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||| ||||||||| || |||||||||| ||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  24791225 gaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcacccctc 24791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 37128458 - 37128591
Alignment:
Q  16 aaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaat 115  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||| |||||||||||||| | ||||| ||| ||||||||||| ||||||||||||||    
T  37128458 aaaacacaccgcacaaagatggaaaatcaaaacaaatagagtcgttgagagacgacgaaattacaaaaacaaacgaaagaaaacaaaaaatatgtgaaat 37128557  T
Q  116 cacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||| ||||| ||||||||||| ||||||||||    
T  37128558 cacttattcaactaggatagaaggaaaaacaatt 37128591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 39067646 - 39067839
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||| | || |||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  39067646 taagacggaaaataaaaaacacaacgcataaagacgggaaatcaaaacaaacatagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 39067745  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||         |||||||||||||||||||||| ||||||||| ||||    
T  39067746 gaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgaccttaaatcacccctc 39067839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2234427 - 2234575
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||| |||||||  || ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  2234427 taagacggaaaatcaaaaacacaccgcacaaagatgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 2234526  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  2234527 aaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatt 2234575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 31407713 - 31407898
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||| | ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||||||||| ||| ||||||||||| |||||||    
T  31407713 gaaatcaaaaacacatcgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaatat 31407812  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||||||| || ||||| || |||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  31407813 gtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcacccctc 31407898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 31202622 - 31202442
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||||||||  |||||| ||| ||||||||||||||||| | ||| |||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  31202622 gaaatcaaaaacacaccgtacaaagacgggaaatcaaaacaaatagagttgttcagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatat 31202523  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcac 180  Q
    |||||||||||| ||||||||  ||||||  |||||||||         |||||||||||||||||||||| |||||||||    
T  31202522 gtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcac 31202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 4757337 - 4757191
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggc-ggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaac 99  Q
    ||||||| ||||| ||||||||||| ||||||| | ||||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||||||||||    
T  4757337 taagacgggaaatcaaaaacacaccgcacaaagacaggaaaat-aaaacaaacagagtcgttcagagacgacgaaatcttaaaaagaaatgaaagaaaac 4757239  T
Q  100 agaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||| || || ||||| |||||||| ||||||||    
T  4757238 agaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaa 4757191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 9501757 - 9501613
Alignment:
Q  2 aagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacag 101  Q
    |||||| ||||||||||||| |||  |||||| ||| |||||||||||    || ||||| |||||||||||||||| ||||| ||| ||||||||||||    
T  9501757 aagacgggaaataaaaaacaaaccgtacaaagacgggaaatcaaaaca----gagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacag 9501662  T
Q  102 aaaatatgtgaaatcacttgttcaattaggatagaa-gaaaaaacaatt 149  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9501661 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaatt 9501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 24699996 - 24699861
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| |||||||   |||||| |||||||| ||| ||||| |||||||||||||| | ||||  |||||||||||||||||||||||    
T  24699996 gaaataaaaaacacaccgcacaaagaaagaaaattaaaacaaacagagtcgttcagagacgacgaaattacaaaagcaaatgaaagaaaacagaaaatat 24699897  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    |||||||||||| || |||||||||| |||||||||    
T  24699896 gtgaaatcacttatttaattaggatataagaaaaaa 24699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 1039851 - 1039998
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||| ||||| ||||||| ||  ||||||||||||||||| ||||| ||||||||| ||||||  |||| |||||||||||| ||    
T  1039851 taagacgggaaataaaaaatacaccgcacaaagacgagaaatcaaaacaaatagagtcgttcagagacgacaaaatca-caaaacaaatgaaagaaagca 1039949  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| || |||||| ||||||| |||| |||||    
T  1039950 gaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaatt 1039998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 10148103 - 10147976
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||| ||||||| ||  ||||||||||||| ||| |||||||||||||||  ||||  ||||| ||| ||||| |||||||||||||||||||||    
T  10148103 aaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgtttagagacgacataatctcaaaaacaaacgaaaggaaacagaaaatatgtgaaatc 10148004  T
Q  117 acttgttcaattaggatagaagaaaaaa 144  Q
    |||| |||||||||||||||||||||||    
T  10148003 acttattcaattaggatagaagaaaaaa 10147976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 2025192 - 2025312
Alignment:
Q  27 cacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaa 126  Q
    ||||||| || |||||||||||||| ||| ||||| |||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||| |||||    
T  2025192 cacaaagacgaaaaatcaaaacaaacagaatcgttcagagacgacgaaatcacaaaaataaacgaaataaaacagaaaacatgtgaaatcacttattcaa 2025291  T
Q  127 ttaggatagaagaaaaaacaa 147  Q
    |||| ||| ||| ||||||||    
T  2025292 ttagaataaaaggaaaaacaa 2025312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 1810179 - 1810369
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| || || ||||||||||| || |||| ||| ||| ||||||||| ||  ||||| ||| |||| ||||||| ||||| ||| |||||||| ||    
T  1810179 taagacgggacatcaaaaacacaccgcataaagacgggaaaccaaaacaaacag--tcgttcagatacgaggaaatcacaaaaacaaacgaaagaaatca 1810276  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat--------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||| |||||||||||||| || |||||||||||||||||||| |||        ||||||||||||||||||||||  |||||||| ||||    
T  1810277 gaaaaaatgtgaaatcacttattgaattaggatagaagaaaaaaaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 1810369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 3204751 - 3204899
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||||| ||| ||||| |||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||  || |||||| ||||| |    
T  3204751 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacataaacaaacgaaagaaaacagaaaatatgtgaaatcactcattaaattagaatagatg 3204850  T
Q  139 aaaaaacaat--------tgatttttgggtcaaaattgactttaaatca 179  Q
     |||||||||        | ||||||||||||||||||||| |||||||    
T  3204851 gaaaaacaattcggagggtaatttttgggtcaaaattgactctaaatca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22787664 - 22787528
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||| ||||||||||| |||||||     ||||||||||||| ||| ||||| ||| |||||| ||||| ||||| ||| |||||||||||    
T  22787664 taagacggaaaatcaaaaacacaccgcacaaagataagaaatcaaaacaaacagagtcgttcagaaacgacggaatcacaaaaacaaacgaaagaaaaca 22787565  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaa 137  Q
    |||||||||| ||||||||| ||||| ||||||||||    
T  22787564 gaaaatatgttaaatcacttattcaactaggatagaa 22787528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 11162041 - 11161908
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaa 113  Q
    |||||||||||| ||||||| ||| |||| |||| ||  ||| ||||   ||||||||||||||| ||||| ||| |||||||||| ||||| |||||||    
T  11162041 aaaaaacacaccgcacaaagacgggaaataaaaaaaagcagagtcgtgcggagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaagatgtgaa 11161942  T
Q  114 atcacttgttcaattaggatagaagaaaaaacaa 147  Q
    || |||| ||||||||||||| ||  ||||||||    
T  11161941 atgacttattcaattaggatataaagaaaaacaa 11161908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 15288752 - 15288903
Alignment:
Q  2 aagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtt-----tagagacgacgaaatcataaaaataaatgaaagaa 96  Q
    |||| ||||||||||||||||||| ||||||| | | ||||||||||||| ||| ||||      |  ||| |||||||||| ||||| ||| |||||||    
T  15288752 aagatgagaaataaaaaacacaccgcacaaagacaggaaatcaaaacaaacagagtcgtgagtcgttcaga-gacgaaatcacaaaaacaaacgaaagaa 15288850  T
Q  97 aacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||| |||||||||| | || |||||||||||||  ||||||||||    
T  15288851 aacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaatt 15288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 15469121 - 15469272
Alignment:
Q  2 aagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtt-----tagagacgacgaaatcataaaaataaatgaaagaa 96  Q
    |||| ||||||||||||||||||| ||||||| | | ||||||||||||| ||| ||||      |  ||| |||||||||| ||||| ||| |||||||    
T  15469121 aagatgagaaataaaaaacacaccgcacaaagacaggaaatcaaaacaaacagagtcgtgagtcgttcaga-gacgaaatcacaaaaacaaacgaaagaa 15469219  T
Q  97 aacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||| |||||||||| | || |||||||||||||  ||||||||||    
T  15469220 aacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaatt 15469272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 2968704 - 2968557
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||  ||||||||||||||||| | | | ||  ||||||||| |||||| ||||| ||| ||||||||||     
T  2968704 taagacggaaaataaaaaacacaccgcacaaaaacggaaaatcaaaacaaacaaagttgtgcagagacgacaaaatcacaaaaacaaacgaaagaaaact 2968605  T
Q  101 gaaaatatgtg-aaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     |||||||||| ||||||||| || |||||| ||| ||  ||||||||    
T  2968604 aaaaatatgtgaaaatcacttatttaattagaatataaagaaaaacaa 2968557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 13570753 - 13570832
Alignment:
Q  71 cgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaattg 150  Q
    |||||||| ||||| ||| |||| |||| ||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  13570753 cgaaatcacaaaaacaaacgaaaaaaaatagaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaattg 13570832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 23971140 - 23971197
Alignment:
Q  90 gaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  23971140 gaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaa 23971197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 32778924 - 32779054
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||| | ||||||| ||||||||||||||||| ||| ||        |||||||||||| ||||||||| |||||||||| |||||||||    
T  32778924 aaatcaaaaacacatcgcacaaagacggaaaatcaaaacaaacagagtc--------acgacgaaatcacaaaaataaacgaaagaaaactgaaaatatg 32779015  T
Q  110 t-gaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    | |||||| ||| || ||||| |||| ||| ||||||||    
T  32779016 tggaaatctcttatttaattatgatataaggaaaaacaa 32779054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10334348 - 10334200
Alignment:
Q  1 taagacgagaaat-aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaac 99  Q
    |||||||||| || |||||||||||| |||| || || ||||||||||| || ||| ||||  | ||| ||||||||||  |||| |||  ||||||||     
T  10334348 taagacgagagatcaaaaaacacaccgcacacagacgaaaaatcaaaaccaacagagtcgtgcaaagatgacgaaatcactaaaacaaacaaaagaaaat 10334249  T
Q  100 agaaaa-tatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||| ||| |||| |||||| || |||||||||||||| ||||||||    
T  10334248 tgaaaaatatatgaactcacttatttaattaggatagaaggaaaaacaa 10334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13576151 - 13576254
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||  ||||||| ||| |||||||||||||||||        |||||||| ||||||  |||||||| ||||||||||     
T  13576151 taagacggaaaataaaaaacacactgcacaaagacgggaaatcaaaacaaataga-------ggagacgacaaaatcaccaaaataaacgaaagaaaact 13576243  T
Q  101 gaaaatatgtg 111  Q
    |||||||||||    
T  13576244 gaaaatatgtg 13576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18204143 - 18204093
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaa 51  Q
    ||||||||||||||||||||||| || |||||| ||| |||||||||||||    
T  18204143 taagacgagaaataaaaaacacaacatacaaagacgggaaatcaaaacaaa 18204093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 4429229 - 4429120
Alignment:
Q  5 acgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaa 104  Q
    ||||||||||||||| |||   ||||||| |||||||||||||||||| |   ||| || |||| ||||||||  ||||  ||||||||||| |  ||||    
T  4429229 acgagaaataaaaaatacattgcacaaagacggaaaatcaaaacaaatggtgccgtgtaaagacaacgaaatctaaaaagaaaatgaaagaagattgaaa 4429130  T
Q  105 atatgtgaaa 114  Q
    ||||||||||    
T  4429129 atatgtgaaa 4429120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 28297072 - 28297211
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacag--aaaat 106  Q
    ||||| ||||||||||| ||||||| || |||||||||||||  ||  || || |||||||||||||||| ||||| | | |||||||||  |  || ||    
T  28297072 gaaatcaaaaacacaccgcacaaagacgaaaaatcaaaacaac-agtgtcattcagagacgacgaaatcacaaaaacagacgaaagaaaatggtaaatat 28297170  T
Q  107 atgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    || ||||||||||  ||||||||| | ||||| ||||||||    
T  28297171 atatgaaatcactaattcaattagaaaagaaggaaaaacaa 28297211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19720181 - 19720102
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaa 84  Q
    |||||||||||||||||||||||||  |||||| |||    |||||||||| |   ||||| |||||||||||||||| |||||    
T  19720181 taagacgagaaataaaaaacacaccgtacaaagacgg----tcaaaacaaacaatatcgttcagagacgacgaaatcacaaaaa 19720102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43937134 - 43937184
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaa 51  Q
    ||||||| ||||| ||||||||||| ||||||| ||| |||||||||||||    
T  43937134 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaa 43937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 1043 - 1228
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  1043 gaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatat 1142  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||| |||||||||| |||||| |||||||||         |||||||||||||||||||||| ||||||||| ||||    
T  1143 gtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgaccttaaatcacccctc 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 139 - 1
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||| |||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| |||||||||  |||||||||| |||||||    
T  139 gaaatcaaaaacgcaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatat 40  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||| |||||||| |||||||| ||||||||    
T  39 gtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6419807 - 6419953
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| |||||||||||||     ||||| |||||||||||||||| ||||| |||||||||||||||    
T  6419807 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacgttgtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaaca 6419906  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  6419907 aaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 6419953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 14783128 - 14783268
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||||||| ||||| ||||||||||||||| |||||||    
T  14783128 gaaatgaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagttgttcagagacgacgaaatcacaaaaagaaatgaaagaaaacaaaaaatat 14783227  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  14783228 gtgaaatcacttattcaactaggatagaaggaaaaacaatt 14783268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12481319 - 12481465
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||||| | | |||||||||||||||||||||| ||||| ||| |||||||||||    
T  12481319 taagacgggaaatcaaaaacacaccgcacaaaaacgggaaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaacaaacgaaagaaaaca 12481418  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||    
T  12481419 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 12481465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 15590066 - 15590221
Alignment:
Q  39 aaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15590066 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaag 15590165  T
Q  139 aaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  15590166 aaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctc 15590221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 19402773 - 19402903
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    |||||||||  |||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  19402773 aaacacaccgtacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatc 19402872  T
Q  117 acttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||||| |||| ||| ||||||||    
T  19402873 acttgttcaattatgatacaaggaaaaacaa 19402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23654422 - 23654276
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||| ||||||    
T  23654422 taagacgggaaatcaaaaacacaccacacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaataaaaca 23654323  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
     ||||||||||||||||||| |||| ||| | |||||| ||||||||    
T  23654322 aaaaatatgtgaaatcacttattcagttaaggtagaaggaaaaacaa 23654276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 21507771 - 21507905
Alignment:
Q  15 aaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaa 114  Q
    ||||||||||| ||| ||| ||| ||||||||||||| | | ||||||||||||||| |||||| ||||| ||| ||||||||||| |||||||||||||    
T  21507771 aaaaacacaccgcactaagacgggaaatcaaaacaaacaaagtcgtttagagacgacaaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaa 21507870  T
Q  115 tcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||| ||||| ||||||||||| ||||||||||    
T  21507871 tcacttattcaactaggatagaaggaaaaacaatt 21507905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 31937369 - 31937510
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| | ||||||||| ||||||| | | || |||||||||| ||| |||||||||||||||||||||| ||||| ||| |||| ||| ||    
T  31937369 taagacgggaaatcataaacacaccgcacaaagacaggaactcaaaacaaacagagtcgtttagagacgacgaaatcacaaaaacaaacgaaa-aaatca 31937467  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  31937468 gaaaatatgtgaaatcacttattcaattaggatagaagaaaaa 31937510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4921830 - 4921973
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||| | ||||||| ||| ||||||||||||||||| ||||  ||||||||| |||||| ||||| ||| |||| |||||     
T  4921830 taagacgggaaatcaaaaacacatcgcacaaagacgggaaatcaaaacaaatagagtcgtgcagagacgacaaaatcacaaaaacaaacgaaataaaact 4921929  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    |||||||||||||||||||| |||||||| |||||||| |||||    
T  4921930 gaaaatatgtgaaatcacttattcaattaagatagaaggaaaaa 4921973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6296198 - 6296347
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||| ||||||||||||  | | ||||| |||||||||||||||| ||||| ||| ||||||||  |    
T  6296198 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaagcaaagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaacta 6296297  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaa-gaaaaaacaatt 149  Q
    |||||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  6296298 gaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaatt 6296347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6303008 - 6303157
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||||| ||||||| ||| ||||||||||||  | | ||||| |||||||||||||||| ||||| ||| ||||||||  |    
T  6303008 taagacggaaaataaaaaacacaccgcacaaagacgggaaatcaaaacaagcaaagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaacta 6303107  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaa-gaaaaaacaatt 149  Q
    |||||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  6303108 gaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaatt 6303157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29927044 - 29927162
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||  ||| ||||||||||||||| |||||| ||||| ||| |||||||||||    
T  29927044 taagacgtgaaataaaaaacacaccgcacaaagacgggaaatcaaaacaac-agagtcgtttagagacgacaaaatcacaaaaacaaacgaaagaaaaca 29927142  T
Q  101 gaaaatatgtgaaatcactt 120  Q
    |||||| |||||||||||||    
T  29927143 gaaaatttgtgaaatcactt 29927162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 4393934 - 4393796
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||  ||||||| ||  ||||||||||||| ||| ||||  |||||| | ||||||| ||||| ||| ||||||||| |||||||||    
T  4393934 gaaataaaaaacacactgcacaaagacgagaaatcaaaacaaacagaatcgtgcagagaccatgaaatcacaaaaacaaacgaaagaaaaaagaaaatat 4393835  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||| |||||||||||||  |||||||    
T  4393834 gtgaaatcacttgttctattaggatagaaggtaaaacaa 4393796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 31705337 - 31705208
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| |||||||||||  ||||||  |||||||||||||||| ||| ||||| |||||||||||||||| ||||  ||| | ||||||| |    
T  31705337 taagacgagaaatcaaaaacacaccgtacaaagatggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaagcaaacggaagaaaata 31705238  T
Q  101 gaaaatatgtgaaatcacttgttcaattag 130  Q
    ||||||||||||||| | || |||||||||    
T  31705237 gaaaatatgtgaaattatttattcaattag 31705208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 8693632 - 8693802
Alignment:
Q  27 cacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaa 126  Q
    ||||||| ||| |||||||||||||   | ||||| ||||||||| |||| | ||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  8693632 cacaaagacgggaaatcaaaacaaacgaagtcgttcagagacgacaaaatgacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaa 8693731  T
Q  127 tt---aggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||   |||||||||| |||||||||         |||||||||||||||||||||| ||||||||| ||||    
T  8693732 ttaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcacccctc 8693802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 2304802 - 2304905
Alignment:
Q  44 aaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    |||||||||||| || || |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||| || |||||  |||    
T  2304802 aaaacaaatagagtcattcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgacagaagggaaa 2304901  T
Q  144 acaa 147  Q
    ||||    
T  2304902 acaa 2304905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 23638083 - 23638195
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||||  ||||||| ||| ||||||||||||| ||| |  || |||||||||||||| | ||| | ||| |||||||||||||||||||||||||||    
T  23638083 aaacacactgcacaaagacgggaaatcaaaacaaacagagttcttcagagacgacgaaattacaaacacaaacgaaagaaaacagaaaatatgtgaaatc 23638182  T
Q  117 acttgttcaatta 129  Q
    |||| ||||||||    
T  23638183 acttattcaatta 23638195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 2488296 - 2488173
Alignment:
Q  15 aaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgt-gaa 113  Q
    ||||||||||||||||||| ||||||||||||||||| | | ||||  |||||| ||||||| |  |||| ||| |||||||||  ||||||| || |||    
T  2488296 aaaaacacaccacacaaagacggaaaatcaaaacaaacatagtcgtgcagagacaacgaaatta-caaaacaaacgaaagaaaaatgaaaatacgtggaa 2488198  T
Q  114 atcacttgttcaattaggatagaag 138  Q
    ||||||| ||| |||||||||||||    
T  2488197 atcacttattcgattaggatagaag 2488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 31937574 - 31937628
Alignment:
Q  95 aaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  31937574 aaaacagaaaatatgttaaatcacttattcaattaggatagatgaaaaaacaatt 31937628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13871569 - 13871623
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaataga 55  Q
    |||||||  |||||||||||||||| ||||||| |||||||||||||||||||||    
T  13871569 taagacggaaaataaaaaacacaccgcacaaagacggaaaatcaaaacaaataga 13871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 15057776 - 15057722
Alignment:
Q  78 ataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattagga 132  Q
    ||||||| | ||||||||||||||||||||||||||||||| | |||||||||||    
T  15057776 ataaaaacagatgaaagaaaacagaaaatatgtgaaatcacgtattcaattagga 15057722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27135284 - 27135188
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaa 98  Q
    |||||||  ||| |||||| ||||| ||||||| || |||| |||| |||||||| |||| ||||||||||||||||| ||||| ||| |||| ||||    
T  27135284 taagacgtaaaacaaaaaatacaccgcacaaagacgaaaaaccaaa-caaatagagtcgtgtagagacgacgaaatcacaaaaacaaaggaaataaaa 27135188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35219862 - 35219995
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| |||||||||||  ||| |||||||| | | ||||||||||||| ||| ||        |||||||||||| ||||  |||  ||||||||||    
T  35219862 taagacgggaaataaaaaatgcactacacaaagacaggaaatcaaaacaaacagagtc--------acgacgaaatcacaaaac-aaacaaaagaaaaca 35219952  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaa 143  Q
    |||||||||||| ||||||| ||| ||| ||||||||| ||||    
T  35219953 gaaaatatgtgatatcacttattcgattcggatagaaggaaaa 35219995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29284925 - 29284836
Alignment:
Q  1 taagacgagaaataaaaaa-cacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaat 89  Q
    ||||||||||||||||||| |||| | ||||||| |  |||||||||||||| | | ||||  | |||||||||||||| ||||| ||||    
T  29284925 taagacgagaaataaaaaaacacatcgcacaaagacaaaaaatcaaaacaaacaaagtcgtgcaaagacgacgaaatcacaaaaacaaat 29284836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 7995509 - 7995702
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| || |||||||||||||| ||| || || ||||||||||| |||| ||||| ||| | |||||||||    
T  7995509 taagacgggaaatcaaaaacacaccgcacaaagacgaaaaatcaaaacaaacagagtcattcagagacgacgatatcacaaaaaaaaaaggaagaaaaca 7995608  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  7995609 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctc 7995702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 14265456 - 14265311
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||| | | | |||||||||    
T  14265456 taagacgggaaatcaaaaacacaccgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacatacgtaagaaaaca 14265357  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaaca 146  Q
    |||||||||||||||||||| || |||||||||||||| |||||||    
T  14265356 gaaaatatgtgaaatcacttatttaattaggatagaaggaaaaaca 14265311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44517319 - 44517171
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| |||||||  || ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||| ||    
T  44517319 taagacgggaaatcaaaaacacaccgcacaaagaagggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaagca 44517220  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||    
T  44517219 gaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaatt 44517171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 424240 - 424386
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||| | || |||| ||| ||||||||||||| | | ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  424240 taagacggaaaataaaaaacacatcgcataaagacgggaaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 424339  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  424340 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 29205457 - 29205309
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||  ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||  ||||||||||    
T  29205457 taagacgggaaatcaaaaacacaccgcacaaagacgtgaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaaca 29205358  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  29205357 gaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaatt 29205309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37822294 - 37822442
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||| ||| || |||| | | ||| ||||||||| | | ||||| |||||||||||||||| ||||| ||||||||||||| |    
T  37822294 taagacgggaaataaaaaacataccgcataaagacaggaaaacaaaacaaacaaagtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaata 37822393  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  37822394 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 37822442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 27534869 - 27534725
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| ||||||||||||| ||  ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  27534869 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacag--tcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 27534772  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||    
T  27534771 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 27534725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 51418165 - 51418040
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||||||| ||||||||||||||||| ||| ||||| |||||||||||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  51418165 acaccgcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactt 51418066  T
Q  121 gttcaattaggatagaagaaaaaacaa 147  Q
     ||||||||||||||||| ||||||||    
T  51418065 -ttcaattaggatagaaggaaaaacaa 51418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3232960 - 3232812
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  ||||||||||||||   ||||||| | | ||||||||||||| ||| ||||| ||| |||||||||||| ||||| ||| |||||||||||    
T  3232960 taagacggaaaataaaaaacacatagcacaaagacaggaaatcaaaacaaacagagtcgttcagaaacgacgaaatcacaaaaacaaacgaaagaaaaca 3232861  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  3232860 gaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaatt 3232812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 42491065 - 42490917
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||| |||||||| || ||||||| ||| ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| ||||||||||     
T  42491065 taagacgagaaatcaaaaacaccccgcacaaagacgggaaatcaaaacaaacagagtcgtacagagacgacgaaatcacaaaaacaaacgaaagaaaact 42490966  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||| |||||||||||||||| |||||||| |||||||  ||||||||||    
T  42490965 gaagatatgtgaaatcacttattcaattaagatagaacgaaaaacaatt 42490917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12871793 - 12871647
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||  | |||||||||||||| ||||| ||| ||||||||||     
T  12871793 taagatgagaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgtgcaaagacgacgaaatcacaaaaacaaacgaaagaaaact 12871694  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||| ||||||||| ||  ||||||||    
T  12871693 gaaaatatgtgaaatcacttattcgattaggatataatgaaaaacaa 12871647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 4882317 - 4882454
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||||| ||||||| ||| |||||||||||||   | ||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  4882317 aaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacgaagtcgttaagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatg 4882416  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||||||||| ||||||||||||| ||  ||||||||    
T  4882417 tgaaatcacttattcaattaggatataatgaaaaacaa 4882454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 45750650 - 45750457
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||| ||||| ||||||| ||  ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| ||||||||||     
T  45750650 taagacgggaaataaaaaatacaccgcacaaagacgataaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacc 45750551  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaa-gaaaaaacaat--------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     |||||||||||||| |||| ||||||||||||| || |||||||||||        |||||||||||||||||||||| ||||||||| ||||    
T  45750550 aaaaatatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgaccttaaatcacccctc 45750457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 10627163 - 10627026
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||||| ||||||| ||| |||  |||||||| ||| || || |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  10627163 aaataaaaaacacaccgcacaaagacgggaaactaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatg 10627064  T
Q  110 tgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||| |||| ||||||||||||| ||  ||||||||    
T  10627063 tgaaattacttattcaattaggatataaagaaaaacaa 10627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 32784260 - 32784132
Alignment:
Q  21 acaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcactt 120  Q
    ||||| ||| ||| ||||||||||||| ||| | | ||||| |||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||    
T  32784260 acaccgcactaagacggaaaatcaaaagaaacatagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcactt 32784161  T
Q  121 gttcaattaggatagaagaaaaaacaatt 149  Q
     |||||| |||||||||| ||||||||||    
T  32784160 attcaataaggatagaaggaaaaacaatt 32784132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13488485 - 13488631
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||| ||||  ||||||| ||| ||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||| ||||||||| |    
T  13488485 taagacgggaaataaaaaaaacactgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacggcgaaatcacaaaaacaaacgaaagaaaata 13488584  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||| ||||||||| |||||||| | | |||| ||||||||    
T  13488585 gaaaatatgtaaaatcacttattcaattaaggtggaaggaaaaacaa 13488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 15791230 - 15791343
Alignment:
Q  7 gagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaat 106  Q
    ||||||||||||||||||||||||||| |   ||||||||||||| ||| ||||| |||||||| ||||||| ||||| ||| |||||||||||||||||    
T  15791230 gagaaataaaaaacacaccacacaaagactcgaaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaat 15791329  T
Q  107 atgtgaaatcactt 120  Q
    |||| |||||||||    
T  15791330 atgttaaatcactt 15791343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 20411730 - 20411597
Alignment:
Q  16 aaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaat 115  Q
    |||||||||| ||||||| ||  ||||||||||||| ||| |||||||||||||| ||||||  ||||| ||| ||||||||||||||||||||||||||    
T  20411730 aaaacacaccgcacaaagacgagaaatcaaaacaaacagagtcgtttagagacgatgaaatcccaaaaacaaacgaaagaaaacagaaaatatgtgaaat 20411631  T
Q  116 cacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||| ||||||| | ||| ||  ||||||||||    
T  20411630 cacttattcaatttgaataaaaagaaaaacaatt 20411597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29726546 - 29726690
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| || ||||||||||  || ||||   ||||||||||||||| ||||| ||| |||||||||||    
T  29726546 taagacgggaaatcaaaaacacaccgcacaaagacggtaa-tcaaaacaaaccgagtcgtgcggagacgacgaaatcacaaaaacaaacgaaagaaaaca 29726644  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaaca 146  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||    
T  29726645 gaaaatatgtgaaatcacttattcgattaggatataaggaaaaaca 29726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15391201 - 15391329
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||| ||||||| ||| |||||||||||||   | ||||  |||||||||||||||| ||||| ||| |||||||||||    
T  15391201 taagacgggaaatcaaaaacacaccgcacaaagacgggaaatcaaaacaaacgaagtcgtccagagacgacgaaatcacaaaaacaaacgaaagaaaaca 15391300  T
Q  101 gaaaatatgtgaaatcacttgttcaatta 129  Q
    ||||| |||||||||||||| ||||||||    
T  15391301 gaaaacatgtgaaatcacttattcaatta 15391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17347769 - 17347624
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||| | |||| |  ||| ||||||||||||| ||| ||||  |||||||||||||||| ||||| ||| |||||||||||    
T  17347769 taagacgggaaatcaaaaacacatcgcacacatacgggaaatcaaaacaaagagagtcgtgcagagacgacgaaatcacaaaaacaaa-gaaagaaaaca 17347671  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||| |||||||||||||| |||  ||| |||||||||||||||||    
T  17347670 gaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaa 17347624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 28678082 - 28678272
Alignment:
Q  4 gacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaa 103  Q
    |||| ||||| ||||||||||  ||||||| ||  ||||||||||||| ||| ||||| | | |||||||||||| ||||| ||| ||||||||| | ||    
T  28678082 gacgggaaatcaaaaacacactgcacaaagacgagaaatcaaaacaaacagagtcgttcaaatacgacgaaatcacaaaaacaaacgaaagaaaatataa 28678181  T
Q  104 aatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    ||||||||||||||||| |||||||| |||||||  |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  28678182 aatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcacccctc 28678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 33486979 - 33487172
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||||||   |||||  ||  ||||||||||||| ||| ||||| | |||||||||||||| ||||| ||| |||||||| ||    
T  33486979 taagacgggaaatcaaaaacacactgtacaaatacgagaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaagca 33487078  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
     ||||||| ||||||||| | ||||||||||||||||| |||||||||         ||||||||||||||||||||||  |||||||| ||||    
T  33487079 taaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 33487172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33938962 - 33939081
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  ||||||||||||| || ||||||| ||||||||||||||||| ||| ||||| ||||| |||||||||| ||||| ||| |||||||||||    
T  33938962 taagacggaaaataaaaaacacgccgcacaaagacggaaaatcaaaacaaacagagtcgttcagagatgacgaaatcacaaaaacaaacgaaagaaaaca 33939061  T
Q  101 gaaaa--tatgtgaaatcac 118  Q
    |||||  |||||||||||||    
T  33939062 gaaaatttatgtgaaatcac 33939081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 45193591 - 45193718
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    |||||||||  |||||| ||  ||||||||||||||||| | | ||| ||||||| |||||| ||||| ||| ||||| |||| ||||||||||||||||    
T  45193591 aaacacaccgtacaaagacgagaaatcaaaacaaatagagtagattaaagacgacaaaatcacaaaaacaaacgaaaggaaacggaaaatatgtgaaatc 45193690  T
Q  117 acttgttcaattaggatagaagaaaaaa 144  Q
    |||| ||||||||||||||||| |||||    
T  45193691 acttattcaattaggatagaaggaaaaa 45193718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 42276519 - 42276380
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| |||||||||||  | |||| ||| ||||||||||||| ||| ||||| |||||||||| ||||| |||   ||| |||||||||| ||||||||    
T  42276519 gaaatcaaaaacacaccggataaagacgggaaatcaaaacaaacagagtcgttcagagacgacgtaatcacaaatc-aaacgaaagaaaactgaaaatat 42276421  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||||| || || ||||| |||||||||||||||||||    
T  42276420 gtgaaatcagttatttaattatgatagaagaaaaaacaatt 42276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18343785 - 18343640
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||| ||| ||||||| ||  |||||| |||||| ||| ||||| | |||| ||||||||| ||||| ||| |||||||||||    
T  18343785 taagacgggaaatcaaaaacataccgcacaaagacgagaaatcagaacaaacagagtcgttcaaagac-acgaaatcacaaaaacaaacgaaagaaaaca 18343687  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||  || ||||| | |||||| ||||||||    
T  18343686 gaaaatatgtgaaatcactcatttaattaaggtagaaggaaaaacaa 18343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 13999138 - 13999025
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||| |||||||||||||| ||||||||| ||  ||||||||||||| ||| ||||  | | | |||| ||||||||||| ||| |||| || ||     
T  13999138 taagacgaaaaataaaaaacacatcacacaaagacgataaatcaaaacaaacagagtcgtacaaaaatgacgtaatcataaaaacaaacgaaataatact 13999039  T
Q  101 gaaaatatgtgaaa 114  Q
    ||||||||||||||    
T  13999038 gaaaatatgtgaaa 13999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33125754 - 33125903
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||||||||||||| |  |||||||   |||||||||||||| ||| | ||  |||||| ||||||||| ||||| |||  |||||| ||     
T  33125754 taagacgagaaataaaaaacacatcgtacaaaggtacaaaatcaaaacaaacagagttgtgcagagacaacgaaatcacaaaaacaaagaaaagaatact 33125853  T
Q  101 gaaaatatgt-gaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
     ||| ||||| |||||||||| ||||||||  | ||||| ||||||||||    
T  33125854 aaaattatgtggaaatcacttattcaattataaaagaaggaaaaacaatt 33125903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 2513565 - 2513629
Alignment:
Q  14 aaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatca 78  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||  | ||||||||||||||    
T  2513565 aaaaaacacaccgcacaaagacggaaaatcaaaacaaatagagtcgtgaaaagacgacgaaatca 2513629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 29069795 - 29069883
Alignment:
Q  5 acgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaa 93  Q
    ||||||||| ||||||||| | ||||||| |  |||||||||||||| ||| |||| || |||||||||||||||||||| ||| ||||    
T  29069795 acgagaaatcaaaaacacatcgcacaaagacataaaatcaaaacaaacagagtcgtgtaaagacgacgaaatcataaaaacaaacgaaa 29069883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 28399286 - 28399414
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||| ||| ||        |||||||||||| ||||| ||| ||||||||||  |||||||    
T  28399286 gaaataaaaaacacaccgcacaaagtcgggaaatcaaaataaacagagtc--------acgacgaaatcacaaaaacaaacgaaagaaaactaaaaatat 28399377  T
Q  109 gtg-aaatcacttgttcaattaggatagaagaaaaaa 144  Q
    ||| ||||||||| || ||||| |||| ||| |||||    
T  28399378 gtgaaaatcacttatttaattatgatataaggaaaaa 28399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 47551265 - 47551177
Alignment:
Q  3 agacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaa 93  Q
    ||||| ||||||||||||||||| ||||| | || |||||||||||||  ||| ||||  |||||||||||||||| ||||| ||| ||||    
T  47551265 agacgggaaataaaaaacacaccgcacaaggccgaaaaatcaaaacaa--agagtcgtgcagagacgacgaaatcacaaaaacaaacgaaa 47551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 4871046 - 4871123
Alignment:
Q  72 gaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    ||||||| ||||| ||| | || |||| |||||||||||||||| |||| ||||||||| ||| ||| ||||||||||    
T  4871046 gaaatcacaaaaacaaacggaaaaaaatagaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaatt 4871123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10782673 - 10782564
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||| |||||||||||||||||| ||||||| ||| || |||||||||| | | |||| || | | |||||||||| ||||| |||| ||| || |      
T  10782673 taagacaagaaataaaaaacacaccgcacaaagacgggaagtcaaaacaaacaaaatcgtgtaaaaatgacgaaatcacaaaaacaaataaaataagatt 10782574  T
Q  101 gaaaatatgt 110  Q
    ||||||||||    
T  10782573 gaaaatatgt 10782564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32301510 - 32301464
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaa 47  Q
    ||||||||||||||||||||||||| |||||||  ||||||| ||||    
T  32301510 taagacgagaaataaaaaacacaccgcacaaagatggaaaattaaaa 32301464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 24114637 - 24114737
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||| ||||||||||| ||||||| ||  ||||||||||||| | | |||| || |||| ||||||||| ||||| |||| ||| || |  |||||||||    
T  24114637 aaattaaaaacacaccgcacaaagacgagaaatcaaaacaaacaaagtcgtgtaaagacaacgaaatcacaaaaacaaataaaataatattgaaaatatg 24114736  T
Q  110 t 110  Q
    |    
T  24114737 t 24114737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13194 - 13337
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||  ||||||||||    
T  13194 taagacgggaaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaaca 13293  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaa 144  Q
    ||||| |||||||||||||| ||||||||||||| || ||||||    
T  13294 gaaaagatgtgaaatcacttattcaattaggataaaaaaaaaaa 13337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 7075 - 7221
Alignment:
Q  3 agacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacaga 102  Q
    ||||| ||||| ||||||||||| ||||||| ||  |||||||||||||  || ||||||| |||||||||||||| ||||| ||| |||||||||||||    
T  7075 agacgggaaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaaccgagtcgtttatagacgacgaaatcacaaaaacaaacgaaagaaaacaga 7174  T
Q  103 aaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaatt 149  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  7175 aaatatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6309 - 6163
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    |||||||  |||||||||||||| | || |||| ||| ||||||||||||| | | ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  6309 taagacggaaaataaaaaacacatcgcataaagacgggaaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 6210  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  6209 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 6163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 404216 - 404350
Alignment:
Q  10 aaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatg 109  Q
    |||||||||||||||| ||||||| ||| ||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| | ||||||||||||||||||    
T  404216 aaataaaaaacacaccgcacaaagacgggaaatcaaaacaaacagagtcgattagagacgacgaaatcacaaaaacaaacggaagaaaacagaaaatatg 404315  T
Q  110 tgaaatcacttgttcaattaggatag-aagaaaaa 143  Q
    ||||||||||| |||||||||||||| ||||||||    
T  404316 tgaaatcacttattcaattaggatagcaagaaaaa 404350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 74328 - 74143
Alignment:
Q  9 gaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatat 108  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| | | ||||| | ||||||  |||||| ||||| ||| |||||||||||||||||||    
T  74328 gaaattaaaaacacaccgcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgaaaaaatcacaaaaacaaacgaaagaaaacagaaaatat 74229  T
Q  109 gtgaaatcacttgttcaattaggatagaagaaaaaacaat---------tgatttttgggtcaaaattgactttaaatcactcctc 185  Q
    |||||||||||| ||||||||||||||||| |||||||||         ||||||||||||||||||||| | |||||||||||||    
T  74228 gtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgattctaaatcactcctc 74143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 35256 - 35108
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||||||||||||||| ||||| |||||||  || ||||||||||||| ||||| ||||||||| || ||||||  ||||| ||| |||||||||||    
T  35256 taagacgagaaataaaaaatacaccgcacaaagatgggaaatcaaaacaaacagatttgtttagagatgatgaaatcgcaaaaacaaacgaaagaaaaca 35157  T
Q  101 gaaa--atatgtgaaatcacttgttcaattaggatagaagaaaaaacaa 147  Q
    ||||  |||||||||||||||| ||||||||||||||||| ||||||||    
T  35156 gaaaatatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 35108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 4016 - 4153
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||| ||||||| ||| ||||||| ||| ||||||||||||| | | ||||| | |||||||||||||| ||||| ||| |||||||||||    
T  4016 taagacgggaaatcaaaaacataccgcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaca 4115  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
     ||||||||||||||||||| || ||||||||||||||    
T  4116 taaaatatgtgaaatcacttatttaattaggatagaag 4153  T

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Target: scaffold1350 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1746 - 1609
Alignment:
Q  1 taagacgagaaataaaaaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaaca 100  Q
    ||||||| ||||||||||||||||| ||| ||| ||| ||||| ||||||| | | || || |||||||||||||||| ||||| ||| |||||||||||    
T  1746 taagacgggaaataaaaaacacaccgcactaagacgggaaatcgaaacaaacaaagtctttcagagacgacgaaatcacaaaaacaaacgaaagaaaaca 1647  T
Q  101 gaaaatatgtgaaatcacttgttcaattaggatagaag 138  Q
     ||||||||||||||||||| |||||||| | ||||||    
T  1646 taaaatatgtgaaatcacttattcaattatggtagaag 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 3058 - 2931
Alignment:
Q  17 aaacacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatc 116  Q
    ||||||| | ||||||| ||| ||||||||||||| ||| || || | ||||||| |||||| ||||| ||| ||||| |||||||||||||||||||||    
T  3058 aaacacatcgcacaaagacgggaaatcaaaacaaacagagtcattcatagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatc 2959  T
Q  117 acttgttcaattaggatagaagaaaaaa 144  Q
    |||| ||||||||||||||||| |||||    
T  2958 acttattcaattaggatagaaggaaaaa 2931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 2386 - 2512
Alignment:
Q  20 cacaccacacaaaggcggaaaatcaaaacaaatagattcgtttagagacgacgaaatcataaaaataaatgaaagaaaacagaaaatatgtgaaatcact 119  Q
    |||||| |||| || ||| ||||||||| ||||||| ||||| | |||| | ||||||| ||||  ||| ||||||||||||||||||||||||||||||    
T  2386 cacaccgcacatagacgggaaatcaaaataaatagagtcgttcatagacaaagaaatcacaaaac-aaacgaaagaaaacagaaaatatgtgaaatcact 2484  T
Q  120 tgttcaattaggatagaagaaaaaacaa 147  Q
    | ||| |||| |||||||| ||||||||    
T  2485 tattcgattatgatagaaggaaaaacaa 2512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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