View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6108_low_6 (Length: 339)
Name: NF6108_low_6
Description: NF6108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6108_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 47706652 - 47706966
Alignment:
| Q |
11 |
cagagagtataacaccattataagaatccataaagtaaccaagttttttgagaattccagaacgcaccaaatcatcaccctctttacaagtggacaaaaa |
110 |
Q |
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| T |
47706652 |
cagagagtataacaccattacaagaatccataaagtaaccaagttttttgagaattccagaacgcaccaaatcatcaccctctttacaagtggacaaaaa |
47706751 |
T |
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| Q |
111 |
cggaagtgcaggctcccaagaaggacgacgataaccatcacgaggccttccaagatacagaaagttgcatacaaaaaaccctaattgacgataattttgg |
210 |
Q |
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| T |
47706752 |
cggaagtgcaggctcccaagaaggacgacgataaccatcacgaggccttccaagatacagaaagttgcatacaaaaaaccctaattgacgataattttgg |
47706851 |
T |
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| Q |
211 |
ccccattgagtcaaataacgacgatgaaaggaagaagtgcatataaaatggagccatcttttggacacaaggattgatttgaagacagttgatggtggta |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47706852 |
ccccattgagtcaaataacgacgatgaaaggaagaagtgcatataaaatggagccatcttttggacacaaggattgatttgaagacagttgatggtggta |
47706951 |
T |
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| Q |
311 |
cacgaagtagaatct |
325 |
Q |
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| T |
47706952 |
cacgaagtagaatct |
47706966 |
T |
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